gomo_highlight

Usage: gomo_highlight <GO DAG> <GOMO XML>+

Description:

Updates the GOMO XML file(s) to add details about the GO terms, such as their name, hierarchy, relative position in that hierarchy and which are implied by others in the significant terms for each motif. This allows many improvements to be made in the human readable html output such as allowing the most specific terms to be highlighted. The same postprocessing can be achieved by using the --dag option to gomo.

Input:

• <GO DAG> - A file containing the heirarchy of the GO terms in the format specified here.
• <GOMO XML> - An xml file output from gomo.

Output:

The GOMO XML file(s) are updated.

Warning messages:

None

Bugs: None known.