#ifndef GENDB_H #define GENDB_H #include "seq.h" SEQ_T *gendb( FILE *out, // Output stream. int type, // Type of alphabet. // 0: protein w/ambigs // 1: dna w/ambigs // 2: codons // 3: dna w/o ambigs // 4: protein w/o ambigs char *bfile, // Name of Markov model file. int use_order, // Order of Markov model to use. double *f, // 0-order model; used if bfile==NULL. int nseqs, // Number of sequences. int min, // Shortest sequence. int max, // Longest sequence. int seed // Random seed. ); #endif