#ifndef MOTIF_IN_MEME_XML_H #define MOTIF_IN_MEME_XML_H #include "motif.h" #include "motif-in-common.h" void* mxml_create(const char *optional_filename, int options); void mxml_destroy(void *data); void mxml_update(void *data, const char *chunk, size_t size, short end); short mxml_has_motif(void *data); short mxml_has_format_match(void *data); short mxml_has_error(void *data); char* mxml_next_error(void *data); MOTIF_T* mxml_next_motif(void *data); ALPH_T mxml_get_alphabet(void *data); int mxml_get_strands(void *data); BOOLEAN_T mxml_get_bg(void *data, ARRAY_T **bg); void* mxml_motif_optional(void *data, int option); void* mxml_file_optional(void *data, int option); #endif