# Meta-MEME - Motif-based hidden Markov modeling toolkit. # # version 3.21 (Release date: August 2004) # # Program: mhmm # File contents: Motif-based hidden Markov model # Motif file: bck2.meme # Create date: Thu Nov 16 15:56:52 2006 # # For further information on how to interpret these results or to get a copy # of the Meta-MEME software, please access http://metameme.sdsc.edu. # # If you use this program in your research, please cite # # William N. Grundy, Timothy L. Bailey, Charles P. Elkan and Michael E. # Baker. "Meta-MEME: Motif-based hidden Markov models of protein # families." Computer Applications in the Biosciences. 13(4):397-406, 1997. # # ***************************************************************************** MHMM v3.21 type: linear num_states: 127 num_spacers: 8 spacer_length: 1 alph_size: 20 alphabet: ACDEFGHIKLMNPQRSTVWY background: 0.0548107 0.0130378 0.0578466 0.0646723 0.0448959 0.0495347 0.0217596 0.0657043 0.0729285 0.0955617 0.0209513 0.0612447 0.0437977 0.0392023 0.0444981 0.0904023 0.0591267 0.0557350 0.0104373 0.0338526 motif_file: bck2.meme State: 0 type: start i_motif: -1 motif_id: --- i_position: -1 id_char: . num_sites: 0 State: 1 type: spacer i_motif: -1 motif_id: --- i_position: 0 id_char: . num_sites: 10 emit: 0.0548107 0.0130378 0.0578466 0.0646723 0.0448959 0.0495347 0.0217596 0.0657043 0.0729285 0.0955617 0.0209513 0.0612447 0.0437977 0.0392023 0.0444981 0.0904023 0.0591267 0.0557350 0.0104373 0.0338526 State: 2 type: start_motif i_motif: 0 motif_id: 1 i_position: 0 id_char: * num_sites: 4 emit: 0.0000000 0.0000000 0.3333333 0.6666667 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 3 type: mid_motif i_motif: 0 motif_id: 1 i_position: 1 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 4 type: mid_motif i_motif: 0 motif_id: 1 i_position: 2 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.6666667 0.3333333 0.0000000 0.0000000 State: 5 type: mid_motif i_motif: 0 motif_id: 1 i_position: 3 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.6666667 0.0000000 0.0000000 0.0000000 0.3333333 0.0000000 0.0000000 0.0000000 0.0000000 State: 6 type: mid_motif i_motif: 0 motif_id: 1 i_position: 4 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 7 type: mid_motif i_motif: 0 motif_id: 1 i_position: 5 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.3333333 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.6666667 0.0000000 State: 8 type: mid_motif i_motif: 0 motif_id: 1 i_position: 6 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.6666667 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.3333333 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 9 type: mid_motif i_motif: 0 motif_id: 1 i_position: 7 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 10 type: mid_motif i_motif: 0 motif_id: 1 i_position: 8 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 11 type: mid_motif i_motif: 0 motif_id: 1 i_position: 9 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 12 type: mid_motif i_motif: 0 motif_id: 1 i_position: 10 id_char: 1 num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 State: 13 type: mid_motif i_motif: 0 motif_id: 1 i_position: 11 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 State: 14 type: mid_motif i_motif: 0 motif_id: 1 i_position: 12 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.6666667 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.3333333 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 15 type: mid_motif i_motif: 0 motif_id: 1 i_position: 13 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.3333333 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.6666667 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 16 type: mid_motif i_motif: 0 motif_id: 1 i_position: 14 id_char: _ num_sites: 4 emit: 0.3333333 0.0000000 0.0000000 0.0000000 0.0000000 0.3333333 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.3333333 0.0000000 0.0000000 0.0000000 0.0000000 State: 17 type: mid_motif i_motif: 0 motif_id: 1 i_position: 15 id_char: _ num_sites: 4 emit: 0.3333333 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.3333333 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.3333333 0.0000000 0.0000000 0.0000000 0.0000000 State: 18 type: end_motif i_motif: 0 motif_id: 1 i_position: 16 id_char: * num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 19 type: spacer i_motif: -1 motif_id: --- i_position: 0 id_char: . num_sites: 10 emit: 0.0548107 0.0130378 0.0578466 0.0646723 0.0448959 0.0495347 0.0217596 0.0657043 0.0729285 0.0955617 0.0209513 0.0612447 0.0437977 0.0392023 0.0444981 0.0904023 0.0591267 0.0557350 0.0104373 0.0338526 State: 20 type: start_motif i_motif: 1 motif_id: 2 i_position: 0 id_char: * num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 21 type: mid_motif i_motif: 1 motif_id: 2 i_position: 1 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 State: 22 type: mid_motif i_motif: 1 motif_id: 2 i_position: 2 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 23 type: mid_motif i_motif: 1 motif_id: 2 i_position: 3 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 State: 24 type: mid_motif i_motif: 1 motif_id: 2 i_position: 4 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 25 type: mid_motif i_motif: 1 motif_id: 2 i_position: 5 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.7500000 State: 26 type: mid_motif i_motif: 1 motif_id: 2 i_position: 6 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.7500000 0.0000000 0.0000000 0.0000000 State: 27 type: mid_motif i_motif: 1 motif_id: 2 i_position: 7 id_char: 2 num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 State: 28 type: mid_motif i_motif: 1 motif_id: 2 i_position: 8 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 29 type: mid_motif i_motif: 1 motif_id: 2 i_position: 9 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 30 type: end_motif i_motif: 1 motif_id: 2 i_position: 10 id_char: * num_sites: 4 emit: 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.7500000 0.0000000 0.0000000 0.0000000 State: 31 type: spacer i_motif: -1 motif_id: --- i_position: 0 id_char: . num_sites: 10 emit: 0.0548107 0.0130378 0.0578466 0.0646723 0.0448959 0.0495347 0.0217596 0.0657043 0.0729285 0.0955617 0.0209513 0.0612447 0.0437977 0.0392023 0.0444981 0.0904023 0.0591267 0.0557350 0.0104373 0.0338526 State: 32 type: start_motif i_motif: 2 motif_id: 3 i_position: 0 id_char: * num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.7500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 State: 33 type: mid_motif i_motif: 2 motif_id: 3 i_position: 1 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.5000000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 State: 34 type: mid_motif i_motif: 2 motif_id: 3 i_position: 2 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.7500000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 35 type: mid_motif i_motif: 2 motif_id: 3 i_position: 3 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.7500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 36 type: mid_motif i_motif: 2 motif_id: 3 i_position: 4 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.5000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 State: 37 type: mid_motif i_motif: 2 motif_id: 3 i_position: 5 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 38 type: mid_motif i_motif: 2 motif_id: 3 i_position: 6 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.5000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 39 type: mid_motif i_motif: 2 motif_id: 3 i_position: 7 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.7500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 40 type: mid_motif i_motif: 2 motif_id: 3 i_position: 8 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.2500000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.5000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 41 type: mid_motif i_motif: 2 motif_id: 3 i_position: 9 id_char: 3 num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.7500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 42 type: mid_motif i_motif: 2 motif_id: 3 i_position: 10 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 43 type: mid_motif i_motif: 2 motif_id: 3 i_position: 11 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 44 type: mid_motif i_motif: 2 motif_id: 3 i_position: 12 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.5000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.5000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 45 type: mid_motif i_motif: 2 motif_id: 3 i_position: 13 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 46 type: end_motif i_motif: 2 motif_id: 3 i_position: 14 id_char: * num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 47 type: spacer i_motif: -1 motif_id: --- i_position: 0 id_char: . num_sites: 10 emit: 0.0548107 0.0130378 0.0578466 0.0646723 0.0448959 0.0495347 0.0217596 0.0657043 0.0729285 0.0955617 0.0209513 0.0612447 0.0437977 0.0392023 0.0444981 0.0904023 0.0591267 0.0557350 0.0104373 0.0338526 State: 48 type: start_motif i_motif: 3 motif_id: 4 i_position: 0 id_char: * num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 0.7500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 49 type: mid_motif i_motif: 3 motif_id: 4 i_position: 1 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 50 type: mid_motif i_motif: 3 motif_id: 4 i_position: 2 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 0.5000000 0.2500000 0.0000000 0.0000000 0.0000000 State: 51 type: mid_motif i_motif: 3 motif_id: 4 i_position: 3 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 State: 52 type: mid_motif i_motif: 3 motif_id: 4 i_position: 4 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.5000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 State: 53 type: mid_motif i_motif: 3 motif_id: 4 i_position: 5 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 54 type: mid_motif i_motif: 3 motif_id: 4 i_position: 6 id_char: 4 num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 55 type: mid_motif i_motif: 3 motif_id: 4 i_position: 7 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 56 type: end_motif i_motif: 3 motif_id: 4 i_position: 8 id_char: * num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 57 type: spacer i_motif: -1 motif_id: --- i_position: 0 id_char: . num_sites: 10 emit: 0.0548107 0.0130378 0.0578466 0.0646723 0.0448959 0.0495347 0.0217596 0.0657043 0.0729285 0.0955617 0.0209513 0.0612447 0.0437977 0.0392023 0.0444981 0.0904023 0.0591267 0.0557350 0.0104373 0.0338526 State: 58 type: start_motif i_motif: 4 motif_id: 5 i_position: 0 id_char: * num_sites: 4 emit: 0.0000000 0.0000000 0.5000000 0.5000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 59 type: mid_motif i_motif: 4 motif_id: 5 i_position: 1 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 60 type: mid_motif i_motif: 4 motif_id: 5 i_position: 2 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 61 type: mid_motif i_motif: 4 motif_id: 5 i_position: 3 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 62 type: mid_motif i_motif: 4 motif_id: 5 i_position: 4 id_char: _ num_sites: 4 emit: 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 63 type: mid_motif i_motif: 4 motif_id: 5 i_position: 5 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 64 type: mid_motif i_motif: 4 motif_id: 5 i_position: 6 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.5000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.5000000 0.0000000 0.0000000 State: 65 type: mid_motif i_motif: 4 motif_id: 5 i_position: 7 id_char: _ num_sites: 4 emit: 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 66 type: mid_motif i_motif: 4 motif_id: 5 i_position: 8 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 67 type: mid_motif i_motif: 4 motif_id: 5 i_position: 9 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.7500000 0.2500000 0.0000000 0.0000000 0.0000000 State: 68 type: mid_motif i_motif: 4 motif_id: 5 i_position: 10 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 69 type: mid_motif i_motif: 4 motif_id: 5 i_position: 11 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.5000000 0.5000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 70 type: mid_motif i_motif: 4 motif_id: 5 i_position: 12 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 71 type: mid_motif i_motif: 4 motif_id: 5 i_position: 13 id_char: 5 num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.7500000 0.0000000 0.0000000 0.0000000 State: 72 type: mid_motif i_motif: 4 motif_id: 5 i_position: 14 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 73 type: mid_motif i_motif: 4 motif_id: 5 i_position: 15 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 74 type: mid_motif i_motif: 4 motif_id: 5 i_position: 16 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 75 type: mid_motif i_motif: 4 motif_id: 5 i_position: 17 id_char: _ num_sites: 4 emit: 0.7500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 State: 76 type: mid_motif i_motif: 4 motif_id: 5 i_position: 18 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 77 type: mid_motif i_motif: 4 motif_id: 5 i_position: 19 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 State: 78 type: mid_motif i_motif: 4 motif_id: 5 i_position: 20 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 79 type: mid_motif i_motif: 4 motif_id: 5 i_position: 21 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 80 type: end_motif i_motif: 4 motif_id: 5 i_position: 22 id_char: * num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 81 type: spacer i_motif: -1 motif_id: --- i_position: 0 id_char: . num_sites: 10 emit: 0.0548107 0.0130378 0.0578466 0.0646723 0.0448959 0.0495347 0.0217596 0.0657043 0.0729285 0.0955617 0.0209513 0.0612447 0.0437977 0.0392023 0.0444981 0.0904023 0.0591267 0.0557350 0.0104373 0.0338526 State: 82 type: start_motif i_motif: 5 motif_id: 6 i_position: 0 id_char: * num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 83 type: mid_motif i_motif: 5 motif_id: 6 i_position: 1 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.7500000 State: 84 type: mid_motif i_motif: 5 motif_id: 6 i_position: 2 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 85 type: mid_motif i_motif: 5 motif_id: 6 i_position: 3 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 86 type: mid_motif i_motif: 5 motif_id: 6 i_position: 4 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 87 type: mid_motif i_motif: 5 motif_id: 6 i_position: 5 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 88 type: mid_motif i_motif: 5 motif_id: 6 i_position: 6 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.5000000 0.0000000 0.0000000 State: 89 type: mid_motif i_motif: 5 motif_id: 6 i_position: 7 id_char: _ num_sites: 4 emit: 0.5000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 90 type: mid_motif i_motif: 5 motif_id: 6 i_position: 8 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 91 type: mid_motif i_motif: 5 motif_id: 6 i_position: 9 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.7500000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 92 type: mid_motif i_motif: 5 motif_id: 6 i_position: 10 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.5000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 State: 93 type: mid_motif i_motif: 5 motif_id: 6 i_position: 11 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 94 type: mid_motif i_motif: 5 motif_id: 6 i_position: 12 id_char: _ num_sites: 4 emit: 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.5000000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 State: 95 type: mid_motif i_motif: 5 motif_id: 6 i_position: 13 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 96 type: mid_motif i_motif: 5 motif_id: 6 i_position: 14 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 97 type: mid_motif i_motif: 5 motif_id: 6 i_position: 15 id_char: _ num_sites: 4 emit: 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.7500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 98 type: mid_motif i_motif: 5 motif_id: 6 i_position: 16 id_char: 6 num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 State: 99 type: mid_motif i_motif: 5 motif_id: 6 i_position: 17 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 100 type: mid_motif i_motif: 5 motif_id: 6 i_position: 18 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.5000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.0000000 0.0000000 0.0000000 State: 101 type: mid_motif i_motif: 5 motif_id: 6 i_position: 19 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 102 type: mid_motif i_motif: 5 motif_id: 6 i_position: 20 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 0.5000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 103 type: mid_motif i_motif: 5 motif_id: 6 i_position: 21 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.3300000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.6700000 0.0000000 0.0000000 0.0000000 State: 104 type: mid_motif i_motif: 5 motif_id: 6 i_position: 22 id_char: _ num_sites: 4 emit: 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.5000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 State: 105 type: mid_motif i_motif: 5 motif_id: 6 i_position: 23 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 106 type: mid_motif i_motif: 5 motif_id: 6 i_position: 24 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 0.5000000 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 107 type: mid_motif i_motif: 5 motif_id: 6 i_position: 25 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.7500000 0.2500000 0.0000000 0.0000000 0.0000000 State: 108 type: mid_motif i_motif: 5 motif_id: 6 i_position: 26 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 109 type: mid_motif i_motif: 5 motif_id: 6 i_position: 27 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 110 type: end_motif i_motif: 5 motif_id: 6 i_position: 28 id_char: * num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 111 type: spacer i_motif: -1 motif_id: --- i_position: 0 id_char: . num_sites: 10 emit: 0.0548107 0.0130378 0.0578466 0.0646723 0.0448959 0.0495347 0.0217596 0.0657043 0.0729285 0.0955617 0.0209513 0.0612447 0.0437977 0.0392023 0.0444981 0.0904023 0.0591267 0.0557350 0.0104373 0.0338526 State: 112 type: start_motif i_motif: 6 motif_id: 7 i_position: 0 id_char: * num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.7500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 113 type: mid_motif i_motif: 6 motif_id: 7 i_position: 1 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.5000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.5000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 114 type: mid_motif i_motif: 6 motif_id: 7 i_position: 2 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 115 type: mid_motif i_motif: 6 motif_id: 7 i_position: 3 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 1.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 116 type: mid_motif i_motif: 6 motif_id: 7 i_position: 4 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.7500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 117 type: mid_motif i_motif: 6 motif_id: 7 i_position: 5 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.2500000 0.7500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 118 type: mid_motif i_motif: 6 motif_id: 7 i_position: 6 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.7500000 0.0000000 0.0000000 0.0000000 0.0000000 State: 119 type: mid_motif i_motif: 6 motif_id: 7 i_position: 7 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.7500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 State: 120 type: mid_motif i_motif: 6 motif_id: 7 i_position: 8 id_char: 7 num_sites: 4 emit: 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.7500000 0.0000000 0.0000000 0.0000000 0.0000000 State: 121 type: mid_motif i_motif: 6 motif_id: 7 i_position: 9 id_char: _ num_sites: 4 emit: 0.0000000 0.0000000 0.7500000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 122 type: mid_motif i_motif: 6 motif_id: 7 i_position: 10 id_char: _ num_sites: 4 emit: 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.0000000 0.0000000 0.0000000 State: 123 type: mid_motif i_motif: 6 motif_id: 7 i_position: 11 id_char: _ num_sites: 4 emit: 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000 0.0000000 0.0000000 0.0000000 0.0000000 State: 124 type: end_motif i_motif: 6 motif_id: 7 i_position: 12 id_char: * num_sites: 4 emit: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.5000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.5000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 State: 125 type: spacer i_motif: -1 motif_id: --- i_position: 0 id_char: . num_sites: 10 emit: 0.0548107 0.0130378 0.0578466 0.0646723 0.0448959 0.0495347 0.0217596 0.0657043 0.0729285 0.0955617 0.0209513 0.0612447 0.0437977 0.0392023 0.0444981 0.0904023 0.0591267 0.0557350 0.0104373 0.0338526 State: 126 type: end i_motif: -1 motif_id: --- i_position: -1 id_char: . num_sites: 0 Transition probability matrix (127 x 127): 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 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