# Makefile.in generated by automake 1.11.1 from Makefile.am. # website/html/Makefile. Generated from Makefile.in by configure. # Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002, # 2003, 2004, 2005, 2006, 2007, 2008, 2009 Free Software Foundation, # Inc. # This Makefile.in is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, # with or without modifications, as long as this notice is preserved. # This program is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY, to the extent permitted by law; without # even the implied warranty of MERCHANTABILITY or FITNESS FOR A # PARTICULAR PURPOSE. pkgdatadir = $(datadir)/meme pkgincludedir = $(includedir)/meme pkglibdir = $(libdir)/meme pkglibexecdir = $(libexecdir)/meme am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd install_sh_DATA = $(install_sh) -c -m 644 install_sh_PROGRAM = $(install_sh) -c install_sh_SCRIPT = $(install_sh) -c INSTALL_HEADER = $(INSTALL_DATA) transform = $(program_transform_name) NORMAL_INSTALL = : PRE_INSTALL = : POST_INSTALL = : NORMAL_UNINSTALL = : PRE_UNINSTALL = : POST_UNINSTALL = : build_triplet = x86_64-unknown-linux-gnu host_triplet = x86_64-unknown-linux-gnu subdir = website/html DIST_COMMON = $(srcdir)/Makefile.am $(srcdir)/Makefile.in ACLOCAL_M4 = $(top_srcdir)/aclocal.m4 am__aclocal_m4_deps = $(top_srcdir)/configure.ac am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \ $(ACLOCAL_M4) mkinstalldirs = $(SHELL) $(top_srcdir)/config/mkinstalldirs CONFIG_HEADER = $(top_builddir)/config.h CONFIG_CLEAN_FILES = CONFIG_CLEAN_VPATH_FILES = depcomp = am__depfiles_maybe = SOURCES = DIST_SOURCES = am__vpath_adj_setup = srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`; am__vpath_adj = case $$p in \ $(srcdir)/*) f=`echo "$$p" | sed "s|^$$srcdirstrip/||"`;; \ *) f=$$p;; \ esac; am__strip_dir = f=`echo $$p | sed -e 's|^.*/||'`; am__install_max = 40 am__nobase_strip_setup = \ srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*|]/\\\\&/g'` am__nobase_strip = \ for p in $$list; do echo "$$p"; done | sed -e "s|$$srcdirstrip/||" am__nobase_list = $(am__nobase_strip_setup); \ for p in $$list; do echo "$$p $$p"; done | \ sed "s| $$srcdirstrip/| |;"' / .*\//!s/ .*/ ./; s,\( .*\)/[^/]*$$,\1,' | \ $(AWK) 'BEGIN { files["."] = "" } { files[$$2] = files[$$2] " " $$1; \ if (++n[$$2] == $(am__install_max)) \ { print $$2, files[$$2]; n[$$2] = 0; files[$$2] = "" } } \ END { for (dir in files) print dir, files[dir] }' am__base_list = \ sed '$$!N;$$!N;$$!N;$$!N;$$!N;$$!N;$$!N;s/\n/ /g' | \ sed '$$!N;$$!N;$$!N;$$!N;s/\n/ /g' am__installdirs = "$(DESTDIR)$(memehtmldir)" DATA = $(memehtml_DATA) DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST) ACLOCAL = ${SHELL} /data/MEME/meme_4.7.0/config/missing --run aclocal-1.11 AMTAR = ${SHELL} /data/MEME/meme_4.7.0/config/missing --run tar ANT = /usr/bin/ant AR = ar AUTOCONF = ${SHELL} /data/MEME/meme_4.7.0/config/missing --run autoconf AUTOHEADER = ${SHELL} /data/MEME/meme_4.7.0/config/missing --run autoheader AUTOMAKE = ${SHELL} /data/MEME/meme_4.7.0/config/missing --run automake-1.11 AWK = gawk BLOCKS_URL = http://blocks.fhcrc.org/blocks-bin/process_blocks.pl CC = gcc CCDEPMODE = depmode=gcc3 CFLAGS = -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 CONTACT = @mus CONVERT = /usr/bin/convert CPP = gcc -E CPPFLAGS = CYGPATH_W = echo DEBUG_FLAGS = DEFS = -DHAVE_CONFIG_H DEPDIR = .deps DOT = /usr/bin/dot DSYMUTIL = DUMPBIN = ECHO_C = ECHO_N = -n ECHO_T = EGREP = /bin/grep -E EXEEXT = FGREP = /bin/grep -F GHOSTSCRIPT = /usr/bin/gs GOSERVER_URL = http://amigo.geneontology.org/cgi-bin/amigo/ GREP = /bin/grep HAVE_ELINKS = no HOSTNAME = mus INSTALL = /usr/bin/install -c INSTALL_DATA = ${INSTALL} -m 644 INSTALL_PROGRAM = ${INSTALL} INSTALL_SCRIPT = ${INSTALL} INSTALL_STRIP_PROGRAM = $(install_sh) -c -s LAMBIN = LD = /usr/bin/ld -m elf_x86_64 LDFLAGS = LIBEXSLT_CFLAGS = -I${top_srcdir}/src/libexslt LIBEXSLT_LIBS = ${top_builddir}/src/libexslt/libexslt.la LIBOBJS = LIBS = -lmpi -lm LIBTOOL = $(SHELL) $(top_builddir)/libtool LIBXML2_CFLAGS = -I${top_srcdir}/src/libxml2/include LIBXML2_LIBS = ${top_builddir}/src/libxml2/libxml2.la LIBXSLT_CFLAGS = -I${top_srcdir}/src/ LIBXSLT_LIBS = ${top_builddir}/src/libxslt/libxslt.la LIPO = LN_S = ln -s LTLIBOBJS = MACHID = linux MAIL = /usr/bin/mail MAKEINFO = ${SHELL} /data/MEME/meme_4.7.0/config/missing --run makeinfo MAST_PORT = MAXTIME = 7200 MEME_DB = ${prefix}/db MEME_DIRECTORY = ${prefix} MEME_LOGS = ${prefix}/LOGS MEME_PORT = MEME_TEMP = MKDIR_P = /bin/mkdir -p MPICC = /usr/bin/mpicc MPIFLAGS = -DPARALLEL MPIINC = -DMPI -I/usr/include MPILIBDIR = /usr/lib MPITYPE = mpich MPI_CMD = /usr/bin/mpirun -np NM = /usr/bin/nm -B NMEDIT = OBJDUMP = objdump OBJEXT = o OPAL_URL = no OPAL_XML = no OPT_FLAGS = -O3 OTOOL = OTOOL64 = PACKAGE = meme PACKAGE_BUGREPORT = PACKAGE_NAME = meme PACKAGE_STRING = meme 4.7.0 PACKAGE_TARNAME = meme PACKAGE_URL = PACKAGE_VERSION = 4.7.0 PATH_SEPARATOR = : PERL = /usr/local/bin/perl PYTHON = /usr/bin/python RANLIB = ranlib SED = /bin/sed SENDMAIL = /usr/sbin/sendmail SET_MAKE = SHELL = /bin/bash STRIP = strip URL = http://meme.nbcr.net/meme VERSION = 4.7.0 WEBDIR = ${prefix}/web WEBSERVICE = XML2_CONFIG = XSLT_CONFIG = abs_builddir = /data/MEME/meme_4.7.0/website/html abs_srcdir = /data/MEME/meme_4.7.0/website/html abs_top_builddir = /data/MEME/meme_4.7.0 abs_top_srcdir = /data/MEME/meme_4.7.0 ac_ct_CC = gcc ac_ct_DUMPBIN = am__include = include am__leading_dot = . am__quote = am__tar = tar --format=posix -chf - "$$tardir" am__untar = tar -xf - bindir = ${exec_prefix}/bin build = x86_64-unknown-linux-gnu build_alias = build_cpu = x86_64 build_os = linux-gnu build_vendor = unknown builddir = . datadir = ${datarootdir} datarootdir = ${prefix}/share docdir = ${datarootdir}/doc/${PACKAGE_TARNAME} dvidir = ${docdir} exec_prefix = ${prefix} host = x86_64-unknown-linux-gnu host_alias = host_cpu = x86_64 host_os = linux-gnu host_vendor = unknown htmldir = ${docdir} includedir = ${prefix}/include infodir = ${datarootdir}/info install_sh = ${SHELL} /data/MEME/meme_4.7.0/config/install-sh libdir = ${exec_prefix}/lib libexecdir = ${exec_prefix}/libexec localedir = ${datarootdir}/locale localstatedir = ${prefix}/var lt_ECHO = echo mandir = ${datarootdir}/man mkdir_p = /bin/mkdir -p oldincludedir = /usr/include pdfdir = ${docdir} prefix = /home/rmott/meme program_transform_name = s,x,x, psdir = ${docdir} sbindir = ${exec_prefix}/sbin sharedstatedir = ${prefix}/com srcdir = . sysconfdir = ${prefix}/etc target_alias = top_build_prefix = ../../ top_builddir = ../.. top_srcdir = ../.. AUTOMAKE_OPTIONS = no-dependencies SEDSPEC = -e 's%\@VERSION\@%$(VERSION)%g' \ -e 's%\@CONTACT\@%$(CONTACT)%g' \ -e 's%\@METAMEME_CONTACT\@%$(METAMEME_CONTACT)%g' \ -e 's%\@URL\@%$(URL)%g' SUFFIXES = html HEAD = head-copyright TAIL = tail-copyright COMMON_INSTALL = $(COMMON_BUILT_FILES) memehtmldir = $(WEBDIR) MEME_FILES = \ alternates.html \ canvas-test.html \ check-submission-form.js \ cisml.css \ cisml.pattern.html.xsl \ dreme.js \ documentation.html \ downloads.html \ fimo-intro.html \ general-faq.html \ glam2-intro.html \ glam2scan-intro.html \ gomo-intro.html \ $(HEAD) \ help_alphabet.html \ help_distribution.html \ help_email.html \ help_filters.html \ help_format.html \ help_multiple_genomes.html \ help_psp.html \ help_sequences.html \ help_width.html \ intro.html \ mast-faq.html \ mast-input.html \ mast-intro.html \ mast-output.html \ mcast-intro.html \ meme-download.html \ meme-faq.html \ meme-input.html \ memechip-intro.html \ meme-intro.html \ metameme-help-format.html \ metameme-intro.html \ metameme.css \ motif_discovery.html \ motif_input.css \ motif_input.js \ motif_search.html \ sample.database \ sample.query \ search.js \ selectdb.js \ showhide.js \ site.css \ spamo.js \ $(TAIL) \ template-css.js \ template-header.js \ tomtom-intro.html \ tomtom.js \ validate.js MEME_IN_FILES = \ cisml.pattern.html.xsl.in \ meme-suite-menu.in \ metameme-help-format.in \ metameme-intro.in \ mhmm-download.in \ mhmm-faq.in \ mhmm-links.in \ mhmm-options.in \ mhmm-overview.in \ mhmm-papers.in \ resources.in \ search.in \ submit-verify.in \ template-footer.in # These files must be built from the corresponding .in files # and should not be included in the distribution. MEME_BUILT_FILES = \ cisml.pattern.html.xsl \ COPYRIGHT.html \ meme-suite-menu.js \ metameme-help-format.html \ metameme-intro.html \ mhmm-download.html \ mhmm-faq.html \ mhmm-links.html \ mhmm-options.html \ mhmm-overview.html \ mhmm-papers.html \ submit-verify.html \ resources.html \ search.html \ template-footer.js MEME_INSTALL = $(MEME_FILES) $(MEME_BUILT_FILES) COPYRIGHT.html memehtml_DATA = $(MEME_FILES) $(MEME_BUILT_FILES) CLEANFILES = \ $(MEME_BUILT_FILES) \ index.html EXTRA_DIST = \ $(MEME_FILES) \ $(MEME_IN_FILES) \ $(HEAD) \ $(TAIL) all: all-am .SUFFIXES: .SUFFIXES: html .old .svnignore $(srcdir)/Makefile.in: $(srcdir)/Makefile.am $(am__configure_deps) @for dep in $?; do \ case '$(am__configure_deps)' in \ *$$dep*) \ ( cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh ) \ && { if test -f $@; then exit 0; else break; fi; }; \ exit 1;; \ esac; \ done; \ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu website/html/Makefile'; \ $(am__cd) $(top_srcdir) && \ $(AUTOMAKE) --gnu website/html/Makefile .PRECIOUS: Makefile Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status @case '$?' in \ *config.status*) \ cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh;; \ *) \ echo ' cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)'; \ cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe);; \ esac; $(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES) cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh $(top_srcdir)/configure: $(am__configure_deps) cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh $(ACLOCAL_M4): $(am__aclocal_m4_deps) cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh $(am__aclocal_m4_deps): mostlyclean-libtool: -rm -f *.lo clean-libtool: -rm -rf .libs _libs install-memehtmlDATA: $(memehtml_DATA) @$(NORMAL_INSTALL) test -z "$(memehtmldir)" || $(MKDIR_P) "$(DESTDIR)$(memehtmldir)" @list='$(memehtml_DATA)'; test -n "$(memehtmldir)" || list=; \ for p in $$list; do \ if test -f "$$p"; then d=; else d="$(srcdir)/"; fi; \ echo "$$d$$p"; \ done | $(am__base_list) | \ while read files; do \ echo " $(INSTALL_DATA) $$files '$(DESTDIR)$(memehtmldir)'"; \ $(INSTALL_DATA) $$files "$(DESTDIR)$(memehtmldir)" || exit $$?; \ done uninstall-memehtmlDATA: @$(NORMAL_UNINSTALL) @list='$(memehtml_DATA)'; test -n "$(memehtmldir)" || list=; \ files=`for p in $$list; do echo $$p; done | sed -e 's|^.*/||'`; \ test -n "$$files" || exit 0; \ echo " ( cd '$(DESTDIR)$(memehtmldir)' && rm -f" $$files ")"; \ cd "$(DESTDIR)$(memehtmldir)" && rm -f $$files tags: TAGS TAGS: ctags: CTAGS CTAGS: distdir: $(DISTFILES) @srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \ topsrcdirstrip=`echo "$(top_srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \ list='$(DISTFILES)'; \ dist_files=`for file in $$list; do echo $$file; done | \ sed -e "s|^$$srcdirstrip/||;t" \ -e "s|^$$topsrcdirstrip/|$(top_builddir)/|;t"`; \ case $$dist_files in \ */*) $(MKDIR_P) `echo "$$dist_files" | \ sed '/\//!d;s|^|$(distdir)/|;s,/[^/]*$$,,' | \ sort -u` ;; \ esac; \ for file in $$dist_files; do \ if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \ if test -d $$d/$$file; then \ dir=`echo "/$$file" | sed -e 's,/[^/]*$$,,'`; \ if test -d "$(distdir)/$$file"; then \ find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \ fi; \ if test -d $(srcdir)/$$file && test $$d != $(srcdir); then \ cp -fpR $(srcdir)/$$file "$(distdir)$$dir" || exit 1; \ find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \ fi; \ cp -fpR $$d/$$file "$(distdir)$$dir" || exit 1; \ else \ test -f "$(distdir)/$$file" \ || cp -p $$d/$$file "$(distdir)/$$file" \ || exit 1; \ fi; \ done check-am: all-am check: check-am all-am: Makefile $(DATA) installdirs: for dir in "$(DESTDIR)$(memehtmldir)"; do \ test -z "$$dir" || $(MKDIR_P) "$$dir"; \ done install: install-am install-exec: install-exec-am install-data: install-data-am uninstall: uninstall-am install-am: all-am @$(MAKE) $(AM_MAKEFLAGS) install-exec-am install-data-am installcheck: installcheck-am install-strip: $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \ install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \ `test -z '$(STRIP)' || \ echo "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'"` install mostlyclean-generic: clean-generic: -test -z "$(CLEANFILES)" || rm -f $(CLEANFILES) distclean-generic: -test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES) -test . = "$(srcdir)" || test -z "$(CONFIG_CLEAN_VPATH_FILES)" || rm -f $(CONFIG_CLEAN_VPATH_FILES) maintainer-clean-generic: @echo "This command is intended for maintainers to use" @echo "it deletes files that may require special tools to rebuild." install-data-hook: clean: clean-am clean-am: clean-generic clean-libtool mostlyclean-am distclean: distclean-am -rm -f Makefile distclean-am: clean-am distclean-generic dvi: dvi-am dvi-am: html: html-am html-am: info: info-am info-am: install-data-am: install-memehtmlDATA @$(NORMAL_INSTALL) $(MAKE) $(AM_MAKEFLAGS) install-data-hook install-dvi: install-dvi-am install-dvi-am: install-exec-am: install-html: install-html-am install-html-am: install-info: install-info-am install-info-am: install-man: install-pdf: install-pdf-am install-pdf-am: install-ps: install-ps-am install-ps-am: installcheck-am: maintainer-clean: maintainer-clean-am -rm -f Makefile maintainer-clean-am: distclean-am maintainer-clean-generic mostlyclean: mostlyclean-am mostlyclean-am: mostlyclean-generic mostlyclean-libtool pdf: pdf-am pdf-am: ps: ps-am ps-am: uninstall-am: uninstall-memehtmlDATA .MAKE: install-am install-data-am install-strip .PHONY: all all-am check check-am clean clean-generic clean-libtool \ distclean distclean-generic distclean-libtool distdir dvi \ dvi-am html html-am info info-am install install-am \ install-data install-data-am install-data-hook install-dvi \ install-dvi-am install-exec install-exec-am install-html \ install-html-am install-info install-info-am install-man \ install-memehtmlDATA install-pdf install-pdf-am install-ps \ install-ps-am install-strip installcheck installcheck-am \ installdirs maintainer-clean maintainer-clean-generic \ mostlyclean mostlyclean-generic mostlyclean-libtool pdf pdf-am \ ps ps-am uninstall uninstall-am uninstall-memehtmlDATA cisml.pattern.html.xsl: cisml.pattern.html.xsl.in Makefile $(SED) $(SEDSPEC) cisml.pattern.html.xsl.in > $@ COPYRIGHT.html: $(HEAD) $(top_srcdir)/COPYING /bin/cat $(HEAD) $(top_srcdir)/COPYING $(TAIL) > COPYRIGHT.html meme-suite-menu.js: meme-suite-menu.in Makefile $(SED) $(SEDSPEC) meme-suite-menu.in > $@ metameme-help-format.html: metameme-help-format.in Makefile $(SED) $(SEDSPEC) metameme-help-format.in > $@ metameme-intro.html: metameme-intro.in Makefile $(SED) $(SEDSPEC) metameme-intro.in > $@ mhmm-download.html: mhmm-download.in Makefile $(SED) $(SEDSPEC) mhmm-download.in > $@ mhmm-faq.html: mhmm-faq.in Makefile $(SED) $(SEDSPEC) mhmm-faq.in > $@ mhmm-links.html: mhmm-links.in Makefile $(SED) $(SEDSPEC) mhmm-links.in > $@ mhmm-options.html: mhmm-options.in Makefile $(SED) $(SEDSPEC) mhmm-options.in > $@ mhmm-overview.html: mhmm-overview.in Makefile $(SED) $(SEDSPEC) mhmm-overview.in > $@ mhmm-papers.html: mhmm-papers.in Makefile $(SED) $(SEDSPEC) mhmm-papers.in > $@ resources.html: resources.in Makefile $(SED) $(SEDSPEC) resources.in > $@ search.html: search.in Makefile $(SED) $(SEDSPEC) search.in > $@ submit-verify.html: submit-verify.in Makefile $(SED) $(SEDSPEC) submit-verify.in > $@ template-footer.js: template-footer.in Makefile $(SED) $(SEDSPEC) template-footer.in > $@ #install-data-hook: # cd $(WEBDIR); \ # if [ ! -e index.html ]; then \ # ln -s intro.html index.html; \ # fi # If .svnignore file doesn't exist # create an empty one .svnignore: if [ -e .svn ] ; then touch .svnignore ; fi # Update SVN svn:ignore property # If .svnignore exists and longer then 0 bytes. .svnignore.old:.svnignore if [ -e .svn ] ; \ then \ if [ -s .svnignore ] ; \ then \ svn propset svn:ignore -F .svnignore . ; \ cp .svnignore .svnignore.old; \ fi \ fi # Tell versions [3.59,3.63) of GNU make to not export all variables. # Otherwise a system limit (for SysV at least) may be exceeded. .NOEXPORT: