psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 47 3 0 0 0 0 0 0 + 2762505 50 0 50 Chr5 26975502 11287208 11287258 1 50, 0, 11287208, 45 5 0 0 0 0 0 0 + 2762505 50 0 50 Chr5 26975502 11472448 11472498 1 50, 0, 11472448, 45 5 0 0 0 0 0 0 + 2762505 50 0 50 Chr2 19698289 4276048 4276098 1 50, 0, 4276048, 50 0 0 0 0 0 0 0 + 2762505 50 0 50 Chr1 30427671 13825549 13825599 1 50, 0, 13825549, 45 5 0 0 0 0 0 0 - 2762505 50 0 50 Chr4 18585056 3907601 3907651 1 50, 0, 3907601, 47 3 0 0 0 0 0 0 - 2762505 50 0 50 Chr1 30427671 16675043 16675093 1 50, 0, 16675043, 50 0 0 0 0 0 0 0 + 2762507 50 0 50 Chr4 18585056 1636823 1636873 1 50, 0, 1636823, 47 3 0 0 0 0 0 0 + 2762507 50 0 50 Chr4 18585056 1899904 1899954 1 50, 0, 1899904, 49 1 0 0 0 0 0 0 + 2762511 50 0 50 Chr5 26975502 12043749 12043799 1 50, 0, 12043749, 49 1 0 0 0 0 0 0 + 2762511 50 0 50 Chr5 26975502 12044992 12045042 1 50, 0, 12044992, 47 3 0 0 0 0 0 0 + 2762511 50 0 50 Chr5 26975502 11795920 11795970 1 50, 0, 11795920, 47 3 0 0 0 0 0 0 + 2762511 50 0 50 Chr5 26975502 11956328 11956378 1 50, 0, 11956328, 47 3 0 0 0 0 0 0 + 2762511 50 0 50 Chr5 26975502 11960997 11961047 1 50, 0, 11960997, 46 4 0 0 0 0 0 0 + 2762511 50 0 50 Chr5 26975502 12026362 12026412 1 50, 0, 12026362, 45 5 0 0 0 0 0 0 + 2762511 50 0 50 Chr5 26975502 12028484 12028534 1 50, 0, 12028484, 45 5 0 0 0 0 0 0 + 2762511 50 0 50 Chr5 26975502 12047937 12047987 1 50, 0, 12047937, 45 5 0 0 0 0 0 0 + 2762511 50 0 50 Chr5 26975502 12051653 12051703 1 50, 0, 12051653, 45 2 0 0 1 2 1 1 + 2762511 50 0 49 Chr5 26975502 11865652 11865700 2 19,28, 0,21, 11865652,11865672, 46 4 0 0 0 0 0 0 - 2762511 50 0 50 Chr5 26975502 12025926 12025976 1 50, 0, 12025926, 45 5 0 0 0 0 0 0 - 2762511 50 0 50 Chr5 26975502 11668557 11668607 1 50, 0, 11668557, 41 2 0 0 0 0 0 0 + 2762513 50 7 50 Chr5 26975502 12096026 12096069 1 43, 7, 12096026, 46 4 0 0 0 0 0 0 + 2762513 50 0 50 Chr4 18585056 3085064 3085114 1 50, 0, 3085064, 39 4 0 0 0 0 0 0 + 2762513 50 7 50 Chr4 18585056 3571752 3571795 1 43, 7, 3571752, 46 1 0 0 0 0 0 0 + 2762513 50 3 50 Chr2 19698289 6177449 6177496 1 47, 3, 6177449, 49 1 0 0 0 0 0 0 - 2762513 50 0 50 Chr4 18585056 3112952 3113002 1 50, 0, 3112952, 39 4 0 0 0 0 0 0 - 2762513 50 7 50 Chr4 18585056 4126779 4126822 1 43, 0, 4126779, 43 2 0 0 0 0 0 0 - 2762513 50 0 45 Chr3 23459830 12324386 12324431 1 45, 5, 12324386, 41 2 0 0 0 0 0 0 - 2762513 50 7 50 Chr3 23459830 12675434 12675477 1 43, 0, 12675434, 44 0 0 0 2 6 1 6 - 2762513 50 0 50 Chr1 30427671 13622176 13622226 3 18,4,22, 0,23,28, 13622176,13622200,13622204,