segment_juncs v1.2.0 (1752) --------------------------- Loading reference sequences... Loading CUFF.1649_From_zu_0_3082201_0...done Loading CUFF.1231_From_oy_0_2965192_0...done Loading CUFF.1337_From_sf_2_2662232_0...done Loading CUFF.1509_From_wu_0_2616263_0...done Loading CUFF.1149_From_mt_0_4217716_0...done Loading CUFF.1275_From_po_0_3332479_0...done Loading CUFF.1615_From_zu_0_3118546_0...done Loading CUFF.1211_From_po_0_3269389_0...done Loading CUFF.1519_From_wu_0_2597064_0...done Loading CUFF.1335_From_sf_2_2524453_0...done Loading CUFF.1507_From_wu_0_2587993_0...done Loading CUFF.1155_From_no_0_2905273_0...done Loading CUFF.1271_From_rsch_4_4034850_0...done Loading CUFF.1209_From_po_0_3295404_0...done Loading CUFF.1523_From_wu_0_2638225_0...done Loading CUFF.867_From_bur_0_1863298_0...done Loading CUFF.1349_From_mt_0_4528444_1...done Loading CUFF.995_From_hi_0_2751582_0...done Loading CUFF.981_From_hi_0_2690171_0...done Loading CUFF.1027_From_kn_0_3558357_0...done Loading CUFF.963_From_edi_0_2744702_0...done Loading CUFF.1503_From_wu_0_2588697_0...done Loading CUFF.1093_From_mt_0_4130072_0...done Loading CUFF.1219_From_po_0_3319326_0...done Loading CUFF.1119_From_hi_0_2939638_0...done Loading CUFF.1019_From_edi_0_2859720_0...done Loading CUFF.1547_From_wu_0_2685428_0...done Loading CUFF.1353_From_tsu_0_3002533_0...done Loading CUFF.1569_From_zu_0_3035650_0...done Loading CUFF.1141_From_mt_0_4449890_0...done Loading CUFF.1529_From_wu_0_2655159_0...done Loading CUFF.1045_From_kn_0_3605300_0...done Loading CUFF.1531_From_ws_0_3340488_0...done Loading CUFF.1497_From_ws_0_3380934_0...done Loading CUFF.1575_From_wu_0_2831218_0...done Loading CUFF.1013_From_kn_0_3532396_0...done Loading CUFF.1095_From_mt_0_4131964_0...done Loading CUFF.1079_From_mt_0_4085357_0...done Loading CUFF.921_From_can_0_3233581_0...done Loading CUFF.869_From_bur_0_1873494_0...done Loading CUFF.1081_From_mt_0_4099484_0...done Loading CUFF.1505_From_wu_0_2607348_0...done Loading CUFF.1427_From_ws_0_3077529_0...done Loading CUFF.1515_From_wu_0_2648785_0...done Loading CUFF.1285_From_rsch_4_4085063_0...done Loading CUFF.1153_From_no_0_2923846_0...done Loading CUFF.1307_From_rsch_4_4277566_0...done Loading CUFF.1281_From_oy_0_3121110_0...done Loading CUFF.1301_From_rsch_4_4111713_0...done Loading CUFF.907_From_can_0_3122480_0...done Loading CUFF.1213_From_po_0_3316390_0...done Loading CUFF.1535_From_wu_0_2676799_0...done Loading CUFF.1003_From_hi_0_2790034_0...done Loading CUFF.1395_From_wil_2_2904915_0...done Loading CUFF.1631_From_zu_0_3277661_1...done Loading CUFF.1109_From_mt_0_4194856_0...done Loading CUFF.1207_From_po_0_3308932_0...done Loading CUFF.1397_From_tsu_0_3228017_0...done Loading CUFF.1459_From_ws_0_3182508_0...done Loading CUFF.1613_From_zu_0_3259399_1...done Loading CUFF.1008_From_kn_0_3525938_0...done Loading CUFF.1495_From_ws_0_3371988_0...done Loading CUFF.1017_From_kn_0_3566907_0...done Loading CUFF.1165_From_no_0_2959683_0...done Loading CUFF.1493_From_wil_2_3087183_0...done Loading CUFF.1573_From_zu_0_3065917_0...done Loading CUFF.1099_From_mt_0_4177596_0...done Loading CUFF.1253_From_po_0_3387411_0...done Loading CUFF.1293_From_rsch_4_4107621_0...done Loading CUFF.1591_From_zu_0_3092045_0...done Loading CUFF.1313_From_po_0_3573778_0...done Loading CUFF.1117_From_hi_0_2939638_0...done Loading CUFF.895_From_can_0_3069992_0...done Loading CUFF.1069_From_hi_0_2916184_0...done Loading CUFF.1637_From_zu_0_3277661_0...done Loading CUFF.1163_From_no_0_2951521_0...done Loading CUFF.1611_From_zu_0_3255503_0...done Loading CUFF.1367_From_tsu_0_3135135_0...done Loading CUFF.1453_From_ws_0_3185408_0...done Loading CUFF.1599_From_zu_0_3200689_0...done Loading CUFF.1315_From_rsch_4_4277566_0...done Loading CUFF.1229_From_po_0_3339041_0...done Loading CUFF.1385_From_sf_2_2653966_0...done Loading CUFF.1617_From_zu_0_3278243_0...done Loading CUFF.1521_From_ws_0_3344070_0...done Loading CUFF.1061_From_ler_0_4016532_0...done Loading CUFF.927_From_ct_1_3108889_0...done Loading CUFF.901_From_can_0_3094988_0...done Loading CUFF.1625_From_zu_0_3243571_0...done Loading CUFF.1481_From_ws_0_3349444_1...done Loading CUFF.1629_From_zu_0_3287917_0...done Loading CUFF.1139_From_ler_0_4211779_1...done Loading CUFF.1287_From_rsch_4_4099439_0...done Loading CUFF.1101_From_mt_0_4188374_0...done Loading CUFF.953_From_edi_0_2759591_0...done Loading CUFF.973_From_edi_0_2871668_0...done Loading CUFF.1597_From_zu_0_3181459_0...done Loading CUFF.1465_From_ws_0_3190963_0...done Loading CUFF.1233_From_po_0_3365309_0...done Loading CUFF.991_From_edi_0_2891968_0...done Loading CUFF.1603_From_zu_0_3242889_0...done Loading CUFF.937_From_can_0_3239881_0...done Loading CUFF.993_From_hi_0_2787534_0...done Loading CUFF.1049_From_ler_0_4002120_0...done Loading CUFF.929_From_can_0_3263637_0...done Loading CUFF.1157_From_no_0_2939843_0...done Loading CUFF.1055_From_ler_0_4004770_0...done Loading CUFF.1539_From_wu_0_2702886_0...done Loading CUFF.989_From_edi_0_2932438_0...done Loading CUFF.1011_From_edi_0_2918156_0...done Loading CUFF.1593_From_zu_0_3112556_0...done Loading CUFF.1113_From_mt_0_4206392_0...done Loading CUFF.1431_From_ws_0_3170660_0...done Loading CUFF.1443_From_wil_2_3052273_0...done Loading CUFF.1533_From_wu_0_2683442_0...done Loading CUFF.881_From_bur_0_1969548_0...done Loading CUFF.1401_From_wil_2_3050523_0...done Loading CUFF.1527_From_wu_0_2675967_0...done Loading CUFF.1259_From_po_0_3402348_0...done Loading CUFF.1379_From_sf_2_2656790_0...done Loading CUFF.955_From_edi_0_2766531_0...done Loading CUFF.1295_From_rsch_4_4118037_0...done Loading CUFF.1007_From_edi_0_2888586_0...done Loading CUFF.935_From_bur_0_2020452_0...done Loading CUFF.1491_From_ws_0_3373966_0...done Loading CUFF.1563_From_ws_0_3381390_0...done Loading CUFF.1133_From_mt_0_4399784_0...done Loading CUFF.1251_From_po_0_3400198_0...done Loading CUFF.1121_From_mt_0_4226690_0...done Loading CUFF.1411_From_rsch_4_4266550_0...done Loading CUFF.1489_From_ws_0_3372620_0...done Loading CUFF.1463_From_ws_0_3190679_0...done Loading CUFF.1087_From_ler_0_4211779_0...done Loading CUFF.1559_From_wu_0_2824162_0...done Loading CUFF.983_From_ct_1_3241157_0...done Loading CUFF.1175_From_hi_0_2953648_0...done Loading CUFF.967_From_edi_0_2887084_2...done Loading CUFF.1455_From_wil_2_3068737_0...done Loading CUFF.1645_From_wu_0_2816600_0...done Loading CUFF.1473_From_ws_0_3293243_0...done Loading CUFF.1399_From_wil_2_2978735_0...done Loading CUFF.969_From_edi_0_2888616_0...done Loading CUFF.1305_From_rsch_4_4263688_0...done Loading CUFF.1373_From_tsu_0_3208747_0...done Loading CUFF.985_From_edi_0_2921730_0...done Loading CUFF.913_From_can_0_3217045_0...done Loading CUFF.1433_From_wil_2_3079625_0...done Loading CUFF.961_From_ct_1_3302721_0...done Loading CUFF.1601_From_zu_0_3250197_1...done Loading CUFF.1173_From_no_0_3113578_1...done Loading CUFF.1187_From_oy_0_3098144_0...done Loading CUFF.1351_From_tsu_0_3175121_0...done Loading CUFF.1543_From_ws_0_3373604_0...done Loading CUFF.1409_From_wil_2_3066229_0...done Loading CUFF.911_From_can_0_3230893_0...done Loading CUFF.1639_From_zu_0_3291057_0...done Loading CUFF.1075_From_edi_0_2906444_0...done Loading CUFF.1471_From_tsu_0_3212935_0...done Loading CUFF.1413_From_sf_2_2687786_0...done Loading CUFF.1167_From_no_0_3096552_0...done Loading CUFF.875_From_bur_0_1999718_0...done Loading CUFF.1475_From_ws_0_3313321_0...done Loading CUFF.1483_From_ws_0_3364198_0...done Loading CUFF.1565_From_zu_0_3075813_0...done Loading CUFF.1363_From_sf_2_2671632_0...done Loading CUFF.1197_From_oy_0_3103794_0...done Loading CUFF.1311_From_rsch_4_4275442_0...done Loading CUFF.1343_From_sf_2_2689374_0...done Loading CUFF.1339_From_sf_2_2689374_0...done Loading CUFF.1359_From_tsu_0_3148935_0...done Loading CUFF.1223_From_po_0_3340213_0...done Loading CUFF.1329_From_sf_2_2642906_0...done Loading CUFF.1407_From_wil_2_3063473_0...done Loading CUFF.1641_From_zu_0_3291057_0...done Loading CUFF.1035_From_kn_0_3751597_0...done Loading CUFF.1169_From_no_0_3101262_0...done Loading CUFF.1423_From_wil_2_3072219_0...done Loading CUFF.1361_From_tsu_0_3175121_0...done Loading CUFF.1325_From_sf_2_2626132_0...done Loading CUFF.1261_From_po_0_3599571_0...done Loading CUFF.1375_From_tsu_0_3211741_0...done Loading CUFF.1417_From_wil_2_3078633_1...done Loading CUFF.1583_From_wu_0_2829124_0...done Loading CUFF.1267_From_no_0_3128142_0...done Loading CUFF.1309_From_rsch_4_4307314_0...done Loading CUFF.1499_From_ws_0_3382714_0...done Loading CUFF.1177_From_no_0_3116640_0...done Loading CUFF.1605_From_zu_0_3257369_0...done Loading CUFF.865_From_bur_0_1967596_0...done Loading CUFF.949_From_can_0_3218459_0...done Loading CUFF.1419_From_sf_2_2701328_0...done Loading CUFF.1345_From_sf_2_2689374_0...done Loading CUFF.1619_From_zu_0_3280025_0...done Loading CUFF.1065_From_ler_0_4153595_0...done Loading CUFF.1595_From_zu_0_3238769_0...done Loading CUFF.1111_From_ler_0_4165287_0...done Loading CUFF.1215_From_oy_0_3162092_0...done Loading CUFF.975_From_edi_0_2902016_0...done Loading CUFF.1545_From_wu_0_2770362_0...done Loading CUFF.1089_From_ler_0_4224097_0...done Loading CUFF.943_From_ct_1_3247037_0...done Loading CUFF.1077_From_ler_0_4225073_0...done Loading CUFF.1607_From_zu_0_3255169_0...done Loading CUFF.1487_From_ws_0_3347582_0...done Loading CUFF.1643_From_wu_0_2816600_0...done Loading CUFF.1609_From_zu_0_3260873_0...done Loading CUFF.1189_From_oy_0_3115434_0...done Loading CUFF.1467_From_ws_0_3309675_0...done Loading CUFF.1553_From_wu_0_2806776_0...done Loading CUFF.1439_From_wil_2_3089541_0...done Loading CUFF.879_From_bur_0_2021834_0...done Loading CUFF.1265_From_po_0_3577252_0...done Loading CUFF.1073_From_ler_0_4209589_1...done Loading CUFF.1479_From_ws_0_3339092_0...done Loading CUFF.1451_From_wil_2_3077447_0...done Loading CUFF.1347_From_sf_2_2682779_0...done Loading CUFF.1635_From_zu_0_3263539_0...done Loading CUFF.1579_From_wu_0_2802868_0...done Loading CUFF.1365_From_tsu_0_3179519_0...done Loading CUFF.1513_From_ws_0_3381290_0...done Loading CUFF.915_From_can_0_3231205_0...done Loading CUFF.1383_From_tsu_0_3242833_1...done Loading CUFF.1415_From_wil_2_3082811_1...done Loading CUFF.1421_From_tsu_0_3215821_0...done Loading CUFF.919_From_can_0_3258779_0...done Loading CUFF.909_From_can_0_3223655_0...done Loading CUFF.1029_From_kn_0_3802200_0...done Loading CUFF.1393_From_tsu_0_3228555_0...done Loading CUFF.1437_From_wil_2_3088151_0...done Loading CUFF.1377_From_tsu_0_3215671_0...done Loading CUFF.1633_From_zu_0_3280213_0...done Loading CUFF.1333_From_sf_2_2666154_1...done Loading CUFF.1405_From_wil_2_3052951_0...done Loading CUFF.971_From_edi_0_2891226_0...done Loading CUFF.1623_From_zu_0_3289907_1...done Loading CUFF.1557_From_wu_0_2824308_0...done Loading CUFF.1015_From_hi_0_2966608_0...done Loading CUFF.951_From_ct_1_3280175_0...done Loading CUFF.1159_From_no_0_3088052_0...done Loading CUFF.1621_From_zu_0_3275363_0...done Loading CUFF.871_From_bur_0_2012810_0...done Loading CUFF.889_From_bur_0_2032354_0...done Loading CUFF.1647_From_zu_0_3289907_1...done Loading CUFF.1289_From_po_0_3606391_0...done Loading CUFF.1053_From_kn_0_3819922_1...done Loading CUFF.877_From_bur_0_2022518_0...done Loading CUFF.1371_From_tsu_0_3211333_0...done Loading CUFF.1279_From_po_0_3599571_0...done Loading CUFF.1577_From_wu_0_2832848_0...done Loading CUFF.1033_From_kn_0_3799876_0...done Loading CUFF.1561_From_wu_0_2827904_0...done Loading CUFF.1041_From_kn_0_3824150_0...done Loading CUFF.1369_From_sf_2_2700286_0...done Loading CUFF.1627_From_zu_0_3262887_0...done Loading CUFF.899_From_bur_0_2022518_0...done Loading CUFF.941_From_bur_0_2025286_0...done Loading CUFF.1585_From_wu_0_2837848_0...done Loading CUFF.1269_From_po_0_3606391_1...done Loading CUFF.1381_From_tsu_0_3240885_0...done Loading CUFF.1181_From_no_0_3120392_0...done Loading CUFF.1501_From_ws_0_3365892_0...done Loading CUFF.1425_From_wil_2_3091415_1...done Loading CUFF.1537_From_ws_0_3382500_0...done Loading CUFF.873_From_bur_0_2020452_0...done Loading CUFF.1277_From_po_0_3599571_0...done Loading CUFF.1447_From_wil_2_3091415_1...done Loading CUFF.897_From_bur_0_2022518_0...done Loading CUFF.997_From_edi_0_2934714_0...done Loading CUFF.977_From_edi_0_2934714_0...done Loading CUFF.979_From_edi_0_2934714_0...done Loading CUFF.1485_From_ws_0_3371988_0...done Loading left segment hits... Microaligned 1087 segments done. Found 51 potential split-segment junctions Found 3 potential small deletions Found 5 potential small insertions Indexing extensions in ./no_0.TOnovel/tmp/left_kept_reads_seg1_missing.fq Indexing extensions in ./no_0.TOnovel/tmp/left_kept_reads_seg2_missing.fq Indexing extensions in ./no_0.TOnovel/tmp/left_kept_reads_seg3_missing.fq Total extensions: 29793182 Total extensions: 29793182 Total extensions: 29793182 Looking for junctions by island end pairings Adding hits from segment file 0 to coverage map Adding hits from segment file 1 to coverage map Adding hits from segment file 2 to coverage map Map covers 15634 bases Map covers 15427 bases in sufficiently long segments Map contains 206 good islands 5740 are left looking bases 4651 are right looking bases Collecting potential splice sites in islands reporting synthetic splice junctions... Examining donor-acceptor pairings in CUFF.951_From_ct_1_3280175_0 Examining donor-acceptor pairings in CUFF.1605_From_zu_0_3257369_0 Examining donor-acceptor pairings in CUFF.1463_From_ws_0_3190679_0 Examining donor-acceptor pairings in CUFF.1371_From_tsu_0_3211333_0 Examining donor-acceptor pairings in CUFF.1467_From_ws_0_3309675_0 Examining donor-acceptor pairings in CUFF.961_From_ct_1_3302721_0 Examining donor-acceptor pairings in CUFF.1399_From_wil_2_2978735_0 Examining donor-acceptor pairings in CUFF.1015_From_hi_0_2966608_0 Examining donor-acceptor pairings in CUFF.1609_From_zu_0_3260873_0 Examining donor-acceptor pairings in CUFF.1621_From_zu_0_3275363_0 Examining donor-acceptor pairings in CUFF.989_From_edi_0_2932438_0 Examining donor-acceptor pairings in CUFF.949_From_can_0_3218459_0 Examining donor-acceptor pairings in CUFF.1513_From_ws_0_3381290_0 Examining donor-acceptor pairings in CUFF.1305_From_rsch_4_4263688_0 Examining donor-acceptor pairings in CUFF.911_From_can_0_3230893_0 Examining donor-acceptor pairings in CUFF.1269_From_po_0_3606391_1 Examining donor-acceptor pairings in CUFF.1177_From_no_0_3116640_0 Examining donor-acceptor pairings in CUFF.1591_From_zu_0_3092045_0 Examining donor-acceptor pairings in CUFF.1101_From_mt_0_4188374_0 Examining donor-acceptor pairings in CUFF.921_From_can_0_3233581_0 Examining donor-acceptor pairings in CUFF.909_From_can_0_3223655_0 Examining donor-acceptor pairings in CUFF.1089_From_ler_0_4224097_0 Examining donor-acceptor pairings in CUFF.1365_From_tsu_0_3179519_0 Examining donor-acceptor pairings in CUFF.1575_From_wu_0_2831218_0 Examining donor-acceptor pairings in CUFF.1259_From_po_0_3402348_0 Examining donor-acceptor pairings in CUFF.1109_From_mt_0_4194856_0 Examining donor-acceptor pairings in CUFF.1359_From_tsu_0_3148935_0 Examining donor-acceptor pairings in CUFF.1019_From_edi_0_2859720_0 Examining donor-acceptor pairings in CUFF.1361_From_tsu_0_3175121_0 Examining donor-acceptor pairings in CUFF.1251_From_po_0_3400198_0 Examining donor-acceptor pairings in CUFF.1167_From_no_0_3096552_0 Examining donor-acceptor pairings in CUFF.1153_From_no_0_2923846_0 Examining donor-acceptor pairings in CUFF.1055_From_ler_0_4004770_0 Examining donor-acceptor pairings in CUFF.1483_From_ws_0_3364198_0 Examining donor-acceptor pairings in CUFF.1639_From_zu_0_3291057_0 Examining donor-acceptor pairings in CUFF.1641_From_zu_0_3291057_0 Examining donor-acceptor pairings in CUFF.1003_From_hi_0_2790034_0 Examining donor-acceptor pairings in CUFF.1349_From_mt_0_4528444_1 Examining donor-acceptor pairings in CUFF.1395_From_wil_2_2904915_0 Examining donor-acceptor pairings in CUFF.1547_From_wu_0_2685428_0 Examining donor-acceptor pairings in CUFF.1479_From_ws_0_3339092_0 Examining donor-acceptor pairings in CUFF.1281_From_oy_0_3121110_0 Examining donor-acceptor pairings in CUFF.1535_From_wu_0_2676799_0 Examining donor-acceptor pairings in CUFF.1165_From_no_0_2959683_0 Examining donor-acceptor pairings in CUFF.1313_From_po_0_3573778_0 Examining donor-acceptor pairings in CUFF.997_From_edi_0_2934714_0 Examining donor-acceptor pairings in CUFF.1309_From_rsch_4_4307314_0 Examining donor-acceptor pairings in CUFF.941_From_bur_0_2025286_0 Examining donor-acceptor pairings in CUFF.1635_From_zu_0_3263539_0 Examining donor-acceptor pairings in CUFF.1295_From_rsch_4_4118037_0 Examining donor-acceptor pairings in CUFF.973_From_edi_0_2871668_0 Examining donor-acceptor pairings in CUFF.1049_From_ler_0_4002120_0 Examining donor-acceptor pairings in CUFF.1301_From_rsch_4_4111713_0 Examining donor-acceptor pairings in CUFF.943_From_ct_1_3247037_0 Examining donor-acceptor pairings in CUFF.1491_From_ws_0_3373966_0 Examining donor-acceptor pairings in CUFF.969_From_edi_0_2888616_0 Examining donor-acceptor pairings in CUFF.1619_From_zu_0_3280025_0 Examining donor-acceptor pairings in CUFF.1397_From_tsu_0_3228017_0 Examining donor-acceptor pairings in CUFF.1439_From_wil_2_3089541_0 Examining donor-acceptor pairings in CUFF.1011_From_edi_0_2918156_0 Examining donor-acceptor pairings in CUFF.1053_From_kn_0_3819922_1 Examining donor-acceptor pairings in CUFF.1423_From_wil_2_3072219_0 Examining donor-acceptor pairings in CUFF.963_From_edi_0_2744702_0 Examining donor-acceptor pairings in CUFF.1431_From_ws_0_3170660_0 Examining donor-acceptor pairings in CUFF.1401_From_wil_2_3050523_0 Examining donor-acceptor pairings in CUFF.1347_From_sf_2_2682779_0 Examining donor-acceptor pairings in CUFF.1481_From_ws_0_3349444_1 Examining donor-acceptor pairings in CUFF.1411_From_rsch_4_4266550_0 Examining donor-acceptor pairings in CUFF.1563_From_ws_0_3381390_0 Examining donor-acceptor pairings in CUFF.1475_From_ws_0_3313321_0 Examining donor-acceptor pairings in CUFF.1593_From_zu_0_3112556_0 Examining donor-acceptor pairings in CUFF.1267_From_no_0_3128142_0 Examining donor-acceptor pairings in CUFF.1603_From_zu_0_3242889_0 Examining donor-acceptor pairings in CUFF.1493_From_wil_2_3087183_0 Examining donor-acceptor pairings in CUFF.915_From_can_0_3231205_0 Examining donor-acceptor pairings in CUFF.1613_From_zu_0_3259399_1 Examining donor-acceptor pairings in CUFF.1607_From_zu_0_3255169_0 Found 3 potential island-end pairing junctions done Aligning 1087 microexon segments in 170 windows window 100 Checked 2174 segments against 170 windows for microexon junctions Found 0 potential microexon junctions -- microexon -- -- done -- -- seg -- CUFF.949_From_can_0_3218459_0 79 158 - CUFF.949_From_can_0_3218459_0 79 169 + CUFF.949_From_can_0_3218459_0 81 171 - CUFF.949_From_can_0_3218459_0 86 171 + CUFF.949_From_can_0_3218459_0 88 158 - CUFF.949_From_can_0_3218459_0 88 169 + CUFF.949_From_can_0_3218459_0 93 158 - CUFF.949_From_can_0_3218459_0 93 169 + CUFF.949_From_can_0_3218459_0 97 169 + CUFF.949_From_can_0_3218459_0 101 171 + CUFF.949_From_can_0_3218459_0 106 171 + CUFF.949_From_can_0_3218459_0 588 791 + CUFF.949_From_can_0_3218459_0 596 773 - CUFF.949_From_can_0_3218459_0 605 773 - CUFF.1089_From_ler_0_4224097_0 440 493 - CUFF.1089_From_ler_0_4224097_0 440 512 - CUFF.1089_From_ler_0_4224097_0 447 502 + CUFF.1089_From_ler_0_4224097_0 449 502 + CUFF.1089_From_ler_0_4224097_0 453 516 + CUFF.1089_From_ler_0_4224097_0 456 512 - CUFF.1089_From_ler_0_4224097_0 456 516 - CUFF.1089_From_ler_0_4224097_0 459 516 + CUFF.949_From_can_0_3218459_0 79 162 - CUFF.949_From_can_0_3218459_0 81 174 - CUFF.949_From_can_0_3218459_0 86 174 + CUFF.949_From_can_0_3218459_0 88 162 - CUFF.949_From_can_0_3218459_0 93 162 - CUFF.949_From_can_0_3218459_0 101 174 + CUFF.949_From_can_0_3218459_0 106 174 + CUFF.949_From_can_0_3218459_0 596 797 - CUFF.949_From_can_0_3218459_0 605 797 - CUFF.1089_From_ler_0_4224097_0 440 516 - CUFF.1089_From_ler_0_4224097_0 447 504 + CUFF.1089_From_ler_0_4224097_0 449 504 + CUFF.949_From_can_0_3218459_0 79 177 - CUFF.949_From_can_0_3218459_0 81 189 - CUFF.949_From_can_0_3218459_0 86 189 + CUFF.949_From_can_0_3218459_0 88 177 - CUFF.949_From_can_0_3218459_0 93 177 - CUFF.949_From_can_0_3218459_0 101 189 + CUFF.949_From_can_0_3218459_0 106 189 + CUFF.1089_From_ler_0_4224097_0 447 510 + CUFF.1089_From_ler_0_4224097_0 449 510 + CUFF.949_From_can_0_3218459_0 79 180 - CUFF.949_From_can_0_3218459_0 88 180 - CUFF.949_From_can_0_3218459_0 93 180 - CUFF.1089_From_ler_0_4224097_0 447 520 + CUFF.1089_From_ler_0_4224097_0 449 520 + CUFF.949_From_can_0_3218459_0 79 186 - CUFF.949_From_can_0_3218459_0 88 186 - CUFF.949_From_can_0_3218459_0 93 186 - -- done -- -- cov -- CUFF.949_From_can_0_3218459_0 93 169 + CUFF.941_From_bur_0_2025286_0 90 2242 - CUFF.915_From_can_0_3231205_0 99 603 - -- done -- -- buf -- -- done -- Reporting potential splice junctions...done Reported 53 total possible splices Reporting potential deletions... Reporting potential insertions...