tophat_reports v1.2.0 (1752)
---------------------------------------
[samopen] SAM header is present: 393 sequences.
SQ: bur_0_1856286_0 - 162
SQ: bur_0_1863298_0 - 172
SQ: bur_0_1873494_0 - 189
SQ: bur_0_1967596_0 - 441
SQ: bur_0_1969548_0 - 683
SQ: bur_0_1999718_0 - 902
SQ: bur_0_2008830_1 - 661
SQ: bur_0_2012810_0 - 881
SQ: bur_0_2020452_0 - 2363
SQ: bur_0_2021834_0 - 920
SQ: bur_0_2022518_0 - 1706
SQ: bur_0_2025286_0 - 2846
SQ: bur_0_2032354_0 - 2050
SQ: can_0_3004765_0 - 104
SQ: can_0_3051143_0 - 136
SQ: can_0_3063905_0 - 149
SQ: can_0_3069992_0 - 156
SQ: can_0_3074990_0 - 162
SQ: can_0_3076940_0 - 165
SQ: can_0_3093852_0 - 192
SQ: can_0_3094988_0 - 194
SQ: can_0_3096308_0 - 196
SQ: can_0_3096700_0 - 197
SQ: can_0_3122480_0 - 182
SQ: can_0_3217045_0 - 808
SQ: can_0_3218459_0 - 900
SQ: can_0_3223655_0 - 702
SQ: can_0_3230893_0 - 1149
SQ: can_0_3231205_0 - 890
SQ: can_0_3233581_0 - 464
SQ: can_0_3239881_0 - 1070
SQ: can_0_3246987_0 - 1295
SQ: can_0_3258779_0 - 824
SQ: can_0_3263637_0 - 880
SQ: ct_1_3072451_0 - 122
SQ: ct_1_3104813_0 - 152
SQ: ct_1_3105079_0 - 152
SQ: ct_1_3108889_0 - 157
SQ: ct_1_3125173_0 - 180
SQ: ct_1_3132277_0 - 192
SQ: ct_1_3133451_0 - 194
SQ: ct_1_3133995_0 - 195
SQ: ct_1_3241157_0 - 779
SQ: ct_1_3247037_0 - 618
SQ: ct_1_3280175_0 - 1652
SQ: ct_1_3302721_0 - 1731
SQ: edi_0_2719343_0 - 137
SQ: edi_0_2723255_0 - 140
SQ: edi_0_2744702_0 - 159
SQ: edi_0_2759591_0 - 177
SQ: edi_0_2759827_0 - 178
SQ: edi_0_2766531_0 - 188
SQ: edi_0_2770994_0 - 196
SQ: edi_0_2771678_0 - 197
SQ: edi_0_2859720_0 - 525
SQ: edi_0_2871668_0 - 534
SQ: edi_0_2887084_2 - 499
SQ: edi_0_2888586_0 - 1053
SQ: edi_0_2888616_0 - 457
SQ: edi_0_2891226_0 - 1154
SQ: edi_0_2891968_0 - 616
SQ: edi_0_2902016_0 - 911
SQ: edi_0_2902966_1 - 576
SQ: edi_0_2906444_0 - 1430
SQ: edi_0_2918156_0 - 583
SQ: edi_0_2921730_0 - 1189
SQ: edi_0_2932438_0 - 4576
SQ: edi_0_2934714_0 - 6060
SQ: hi_0_2690171_0 - 102
SQ: hi_0_2751582_0 - 140
SQ: hi_0_2773206_0 - 161
SQ: hi_0_2778596_0 - 168
SQ: hi_0_2787534_0 - 180
SQ: hi_0_2790034_0 - 183
SQ: hi_0_2795398_0 - 191
SQ: hi_0_2796882_0 - 194
SQ: hi_0_2916184_0 - 540
SQ: hi_0_2939638_0 - 643
SQ: hi_0_2953648_0 - 1323
SQ: hi_0_2966608_0 - 1780
SQ: kn_0_3525938_0 - 122
SQ: kn_0_3532396_0 - 124
SQ: kn_0_3558357_0 - 136
SQ: kn_0_3566907_0 - 141
SQ: kn_0_3605300_0 - 168
SQ: kn_0_3607964_0 - 170
SQ: kn_0_3612097_0 - 174
SQ: kn_0_3615421_0 - 178
SQ: kn_0_3751597_0 - 556
SQ: kn_0_3799876_0 - 1517
SQ: kn_0_3802200_0 - 1123
SQ: kn_0_3819922_1 - 2144
SQ: kn_0_3824150_0 - 3726
SQ: ler_0_3967940_0 - 136
SQ: ler_0_3970530_0 - 138
SQ: ler_0_3984912_0 - 150
SQ: ler_0_3990558_0 - 155
SQ: ler_0_3998132_0 - 163
SQ: ler_0_4001192_0 - 167
SQ: ler_0_4002120_0 - 168
SQ: ler_0_4004770_0 - 171
SQ: ler_0_4008790_0 - 176
SQ: ler_0_4013624_0 - 182
SQ: ler_0_4016532_0 - 187
SQ: ler_0_4018402_0 - 190
SQ: ler_0_4022532_0 - 196
SQ: ler_0_4153595_0 - 680
SQ: ler_0_4165287_0 - 740
SQ: ler_0_4209589_1 - 1085
SQ: ler_0_4211779_0 - 968
SQ: ler_0_4211779_1 - 1161
SQ: ler_0_4224097_0 - 1753
SQ: ler_0_4225073_0 - 711
SQ: mt_0_4077275_0 - 105
SQ: mt_0_4085357_0 - 108
SQ: mt_0_4099484_0 - 114
SQ: mt_0_4107440_0 - 117
SQ: mt_0_4130072_0 - 128
SQ: mt_0_4130216_0 - 128
SQ: mt_0_4131964_0 - 129
SQ: mt_0_4137424_0 - 131
SQ: mt_0_4157996_0 - 143
SQ: mt_0_4177596_0 - 155
SQ: mt_0_4188374_0 - 163
SQ: mt_0_4189084_0 - 163
SQ: mt_0_4193196_0 - 166
SQ: mt_0_4193436_0 - 167
SQ: mt_0_4194856_0 - 168
SQ: mt_0_4198830_0 - 171
SQ: mt_0_4206392_0 - 177
SQ: mt_0_4208490_0 - 178
SQ: mt_0_4214916_0 - 184
SQ: mt_0_4217716_0 - 186
SQ: mt_0_4218074_0 - 186
SQ: mt_0_4226256_0 - 193
SQ: mt_0_4226690_0 - 194
SQ: mt_0_4227978_0 - 195
SQ: mt_0_4229612_0 - 197
SQ: mt_0_4229662_0 - 197
SQ: mt_0_4230874_0 - 198
SQ: mt_0_4231054_0 - 198
SQ: mt_0_4399784_0 - 226
SQ: mt_0_4449890_0 - 326
SQ: mt_0_4528444_1 - 1248
SQ: no_0_2886472_0 - 114
SQ: no_0_2905273_0 - 125
SQ: no_0_2923846_0 - 140
SQ: no_0_2934639_0 - 150
SQ: no_0_2936769_0 - 152
SQ: no_0_2939843_0 - 156
SQ: no_0_2951521_0 - 170
SQ: no_0_2959683_0 - 182
SQ: no_0_2964763_0 - 191
SQ: no_0_3088052_0 - 1016
SQ: no_0_3096552_0 - 401
SQ: no_0_3101262_0 - 768
SQ: no_0_3113578_1 - 874
SQ: no_0_3116640_0 - 1890
SQ: no_0_3120392_0 - 2833
SQ: no_0_3127760_0 - 126
SQ: no_0_3128142_0 - 2961
SQ: oy_0_2965192_0 - 141
SQ: oy_0_2966542_0 - 143
SQ: oy_0_2999986_0 - 186
SQ: oy_0_3001818_0 - 190
SQ: oy_0_3098144_0 - 340
SQ: oy_0_3103794_0 - 327
SQ: oy_0_3115434_0 - 696
SQ: oy_0_3121110_0 - 900
SQ: oy_0_3148368_0 - 1677
SQ: oy_0_3162092_0 - 2062
SQ: oy_0_3174730_0 - 3038
SQ: po_0_3262375_0 - 106
SQ: po_0_3263571_0 - 106
SQ: po_0_3269389_0 - 108
SQ: po_0_3293868_0 - 117
SQ: po_0_3295404_0 - 118
SQ: po_0_3299272_0 - 119
SQ: po_0_3300998_0 - 120
SQ: po_0_3303804_0 - 122
SQ: po_0_3306688_0 - 123
SQ: po_0_3308932_0 - 124
SQ: po_0_3316390_0 - 127
SQ: po_0_3318018_0 - 128
SQ: po_0_3319326_0 - 129
SQ: po_0_3324652_0 - 132
SQ: po_0_3330421_0 - 135
SQ: po_0_3330517_0 - 135
SQ: po_0_3332479_0 - 136
SQ: po_0_3335551_0 - 138
SQ: po_0_3339041_0 - 140
SQ: po_0_3340213_0 - 141
SQ: po_0_3365309_0 - 159
SQ: po_0_3372769_0 - 165
SQ: po_0_3382155_0 - 174
SQ: po_0_3383903_0 - 176
SQ: po_0_3387411_0 - 180
SQ: po_0_3388795_0 - 181
SQ: po_0_3389051_0 - 182
SQ: po_0_3390421_0 - 183
SQ: po_0_3391143_0 - 184
SQ: po_0_3393401_0 - 187
SQ: po_0_3395210_0 - 189
SQ: po_0_3400198_0 - 195
SQ: po_0_3402348_0 - 198
SQ: po_0_3573778_0 - 1290
SQ: po_0_3577252_0 - 655
SQ: po_0_3599571_0 - 1900
SQ: po_0_3606391_0 - 2915
SQ: po_0_3606391_1 - 2117
SQ: rsch_4_4034850_0 - 102
SQ: rsch_4_4055167_0 - 113
SQ: rsch_4_4059537_0 - 115
SQ: rsch_4_4085063_0 - 134
SQ: rsch_4_4092331_0 - 140
SQ: rsch_4_4099439_0 - 147
SQ: rsch_4_4107621_0 - 156
SQ: rsch_4_4109969_0 - 159
SQ: rsch_4_4111713_0 - 161
SQ: rsch_4_4118037_0 - 170
SQ: rsch_4_4118145_0 - 170
SQ: rsch_4_4118451_0 - 170
SQ: rsch_4_4263688_0 - 845
SQ: rsch_4_4266550_0 - 1163
SQ: rsch_4_4275442_0 - 625
SQ: rsch_4_4277566_0 - 1702
SQ: rsch_4_4307314_0 - 440
SQ: sf_2_2459023_0 - 110
SQ: sf_2_2488391_0 - 130
SQ: sf_2_2492465_0 - 133
SQ: sf_2_2504999_0 - 145
SQ: sf_2_2518965_0 - 162
SQ: sf_2_2524453_0 - 169
SQ: sf_2_2526151_0 - 172
SQ: sf_2_2532172_0 - 181
SQ: sf_2_2626132_0 - 457
SQ: sf_2_2642906_0 - 740
SQ: sf_2_2653966_0 - 695
SQ: sf_2_2656790_0 - 667
SQ: sf_2_2662232_0 - 116
SQ: sf_2_2666154_1 - 804
SQ: sf_2_2671632_0 - 995
SQ: sf_2_2682779_0 - 1598
SQ: sf_2_2687786_0 - 2198
SQ: sf_2_2689374_0 - 2478
SQ: sf_2_2700286_0 - 2493
SQ: sf_2_2701328_0 - 737
SQ: tsu_0_3002533_0 - 120
SQ: tsu_0_3048303_0 - 164
SQ: tsu_0_3065715_0 - 190
SQ: tsu_0_3135135_0 - 212
SQ: tsu_0_3148935_0 - 350
SQ: tsu_0_3175121_0 - 705
SQ: tsu_0_3179519_0 - 618
SQ: tsu_0_3208747_0 - 402
SQ: tsu_0_3211333_0 - 1292
SQ: tsu_0_3211741_0 - 814
SQ: tsu_0_3212935_0 - 1050
SQ: tsu_0_3215671_0 - 869
SQ: tsu_0_3215821_0 - 1361
SQ: tsu_0_3228017_0 - 304
SQ: tsu_0_3228555_0 - 543
SQ: tsu_0_3229935_0 - 2473
SQ: tsu_0_3240885_0 - 1926
SQ: tsu_0_3242833_1 - 915
SQ: wil_2_2834553_0 - 104
SQ: wil_2_2885037_0 - 140
SQ: wil_2_2904915_0 - 162
SQ: wil_2_2906137_0 - 164
SQ: wil_2_2918451_0 - 183
SQ: wil_2_2978735_0 - 303
SQ: wil_2_3050523_0 - 274
SQ: wil_2_3052273_0 - 1184
SQ: wil_2_3052951_0 - 917
SQ: wil_2_3063473_0 - 760
SQ: wil_2_3066229_0 - 1751
SQ: wil_2_3068737_0 - 1796
SQ: wil_2_3072219_0 - 1093
SQ: wil_2_3077447_0 - 1249
SQ: wil_2_3078633_1 - 528
SQ: wil_2_3079625_0 - 723
SQ: wil_2_3082695_0 - 2123
SQ: wil_2_3082811_1 - 996
SQ: wil_2_3087183_0 - 844
SQ: wil_2_3088151_0 - 1916
SQ: wil_2_3089541_0 - 464
SQ: wil_2_3090237_0 - 495
SQ: wil_2_3091415_1 - 3713
SQ: wil_2_3092619_0 - 1832
SQ: ws_0_3077529_0 - 108
SQ: ws_0_3108307_0 - 122
SQ: ws_0_3113467_0 - 125
SQ: ws_0_3133801_0 - 137
SQ: ws_0_3134473_0 - 138
SQ: ws_0_3170660_0 - 170
SQ: ws_0_3179678_0 - 181
SQ: ws_0_3180242_0 - 182
SQ: ws_0_3180706_0 - 182
SQ: ws_0_3182508_0 - 185
SQ: ws_0_3185408_0 - 189
SQ: ws_0_3187073_0 - 191
SQ: ws_0_3188419_0 - 193
SQ: ws_0_3190679_0 - 197
SQ: ws_0_3190963_0 - 197
SQ: ws_0_3293243_0 - 326
SQ: ws_0_3309675_0 - 587
SQ: ws_0_3313321_0 - 545
SQ: ws_0_3326342_0 - 850
SQ: ws_0_3339092_0 - 662
SQ: ws_0_3340488_0 - 1184
SQ: ws_0_3344070_0 - 916
SQ: ws_0_3347582_0 - 1380
SQ: ws_0_3349444_1 - 750
SQ: ws_0_3364198_0 - 355
SQ: ws_0_3365892_0 - 2040
SQ: ws_0_3371988_0 - 2503
SQ: ws_0_3372620_0 - 841
SQ: ws_0_3373604_0 - 3230
SQ: ws_0_3373966_0 - 306
SQ: ws_0_3380934_0 - 3237
SQ: ws_0_3381290_0 - 887
SQ: ws_0_3381390_0 - 1739
SQ: ws_0_3382500_0 - 4066
SQ: ws_0_3382714_0 - 946
SQ: wu_0_2587993_0 - 101
SQ: wu_0_2588697_0 - 101
SQ: wu_0_2597064_0 - 105
SQ: wu_0_2607348_0 - 111
SQ: wu_0_2616263_0 - 117
SQ: wu_0_2638225_0 - 133
SQ: wu_0_2644373_0 - 139
SQ: wu_0_2648785_0 - 143
SQ: wu_0_2654219_0 - 149
SQ: wu_0_2654945_0 - 150
SQ: wu_0_2655159_0 - 150
SQ: wu_0_2655481_0 - 151
SQ: wu_0_2659743_0 - 156
SQ: wu_0_2662433_0 - 159
SQ: wu_0_2675967_0 - 178
SQ: wu_0_2676799_0 - 180
SQ: wu_0_2676871_0 - 180
SQ: wu_0_2683442_0 - 191
SQ: wu_0_2685428_0 - 195
SQ: wu_0_2687576_0 - 199
SQ: wu_0_2702886_0 - 155
SQ: wu_0_2765814_0 - 439
SQ: wu_0_2770362_0 - 529
SQ: wu_0_2802868_0 - 920
SQ: wu_0_2806776_0 - 972
SQ: wu_0_2816600_0 - 1510
SQ: wu_0_2824162_0 - 575
SQ: wu_0_2824308_0 - 1840
SQ: wu_0_2827904_0 - 2068
SQ: wu_0_2829124_0 - 1900
SQ: wu_0_2831218_0 - 213
SQ: wu_0_2832848_0 - 1191
SQ: wu_0_2837848_0 - 2726
SQ: zu_0_3022629_0 - 113
SQ: zu_0_3035650_0 - 119
SQ: zu_0_3056845_0 - 131
SQ: zu_0_3065079_0 - 136
SQ: zu_0_3065917_0 - 137
SQ: zu_0_3075813_0 - 144
SQ: zu_0_3082201_0 - 149
SQ: zu_0_3090923_0 - 157
SQ: zu_0_3092045_0 - 158
SQ: zu_0_3099332_0 - 166
SQ: zu_0_3112556_0 - 182
SQ: zu_0_3118546_0 - 192
SQ: zu_0_3181459_0 - 297
SQ: zu_0_3200689_0 - 234
SQ: zu_0_3238769_0 - 469
SQ: zu_0_3242889_0 - 635
SQ: zu_0_3243571_0 - 801
SQ: zu_0_3250197_1 - 828
SQ: zu_0_3255169_0 - 1400
SQ: zu_0_3255503_0 - 1394
SQ: zu_0_3257369_0 - 1380
SQ: zu_0_3259399_1 - 320
SQ: zu_0_3260131_0 - 401
SQ: zu_0_3260873_0 - 746
SQ: zu_0_3262887_0 - 1107
SQ: zu_0_3263539_0 - 1176
SQ: zu_0_3272509_0 - 692
SQ: zu_0_3275363_0 - 1263
SQ: zu_0_3277661_0 - 913
SQ: zu_0_3277661_1 - 563
SQ: zu_0_3278243_0 - 826
SQ: zu_0_3280025_0 - 1543
SQ: zu_0_3280213_0 - 2114
SQ: zu_0_3287917_0 - 581
SQ: zu_0_3289907_1 - 5821
SQ: zu_0_3291057_0 - 2554
Loaded 221 junctions
Reporting final accepted alignments...done
Printing junction BED track...done
Printing insertions...done
Printing deletions...done
Found 214 junctions from happy spliced reads