This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by gsl configure 1.15, which was generated by GNU Autoconf 2.68. Invocation command line was $ ./configure --prefix=/Net/mus/data/arabidopsis/xiang/software/gsl-lib ## --------- ## ## Platform. ## ## --------- ## hostname = rabid uname -m = x86_64 uname -r = 2.6.38-8-server uname -s = Linux uname -v = #42-Ubuntu SMP Mon Apr 11 03:49:04 UTC 2011 /usr/bin/uname -p = unknown /bin/uname -X = unknown /bin/arch = unknown /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /home/xianggan/bin/soapde PATH: /home/xianggan/bin/bin PATH: /home/xianggan/bin PATH: /home/xianggan/bin/exoner PATH: /home/xianggan/bin/apa_svn/bin/ PATH: /home/xianggan/bin/exoner PATH: /home/xianggan/bin PATH: /usr/local/sbin PATH: /usr/local/bin PATH: /usr/sbin PATH: /usr/bin PATH: /sbin PATH: /bin PATH: /usr/games ## ----------- ## ## Core tests. ## ## ----------- ## configure:2350: checking for a BSD-compatible install configure:2418: result: /usr/bin/install -c configure:2429: checking whether build environment is sane configure:2479: result: yes configure:2620: checking for a thread-safe mkdir -p configure:2659: result: /bin/mkdir -p configure:2672: checking for gawk configure:2702: result: no configure:2672: checking for mawk configure:2688: found /usr/bin/mawk configure:2699: result: mawk configure:2710: checking whether make sets $(MAKE) configure:2732: result: yes configure:2815: checking whether to enable maintainer-specific portions of Makefiles configure:2824: result: no configure:2862: checking for a sed that does not truncate output configure:2926: result: /bin/sed configure:2936: checking whether make sets $(MAKE) configure:2958: result: yes configure:2972: checking build system type configure:2986: result: x86_64-unknown-linux-gnu configure:3006: checking host system type configure:3019: result: x86_64-unknown-linux-gnu configure:3094: checking for gcc configure:3110: found /usr/bin/gcc configure:3121: result: gcc configure:3350: checking for C compiler version configure:3359: gcc --version >&5 gcc (Ubuntu/Linaro 4.5.2-8ubuntu4) 4.5.2 Copyright (C) 2010 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:3370: $? = 0 configure:3359: gcc -v >&5 Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/lib/x86_64-linux-gnu/gcc/x86_64-linux-gnu/4.5.2/lto-wrapper Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Ubuntu/Linaro 4.5.2-8ubuntu4' --with-bugurl=file:///usr/share/doc/gcc-4.5/README.Bugs --enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-4.5 --enable-shared --enable-multiarch --with-multiarch-defaults=x86_64-linux-gnu --enable-linker-build-id --with-system-zlib --libexecdir=/usr/lib/x86_64-linux-gnu --without-included-gettext --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.5 --libdir=/usr/lib/x86_64-linux-gnu --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-plugin --enable-gold --enable-ld=default --with-plugin-ld=ld.gold --enable-objc-gc --disable-werror --with-arch-32=i686 --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix gcc version 4.5.2 (Ubuntu/Linaro 4.5.2-8ubuntu4) configure:3370: $? = 0 configure:3359: gcc -V >&5 gcc: '-V' option must have argument configure:3370: $? = 1 configure:3359: gcc -qversion >&5 gcc: unrecognized option '-qversion' gcc: no input files configure:3370: $? = 1 configure:3390: checking whether the C compiler works configure:3412: gcc conftest.c >&5 configure:3416: $? = 0 configure:3464: result: yes configure:3467: checking for C compiler default output file name configure:3469: result: a.out configure:3475: checking for suffix of executables configure:3482: gcc -o conftest conftest.c >&5 configure:3486: $? = 0 configure:3508: result: configure:3530: checking whether we are cross compiling configure:3538: gcc -o conftest conftest.c >&5 configure:3542: $? = 0 configure:3549: ./conftest configure:3553: $? = 0 configure:3568: result: no configure:3573: checking for suffix of object files configure:3595: gcc -c conftest.c >&5 configure:3599: $? = 0 configure:3620: result: o configure:3624: checking whether we are using the GNU C compiler configure:3643: gcc -c conftest.c >&5 configure:3643: $? = 0 configure:3652: result: yes configure:3661: checking whether gcc accepts -g configure:3681: gcc -c -g conftest.c >&5 configure:3681: $? = 0 configure:3722: result: yes configure:3739: checking for gcc option to accept ISO C89 configure:3803: gcc -c -g -O2 conftest.c >&5 configure:3803: $? = 0 configure:3816: result: none needed configure:3847: checking for style of include used by make configure:3875: result: GNU configure:3900: checking dependency style of gcc configure:4010: result: gcc3 configure:4030: checking how to run the C preprocessor configure:4061: gcc -E conftest.c configure:4061: $? = 0 configure:4075: gcc -E conftest.c conftest.c:12:28: fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:4075: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "gsl" | #define PACKAGE_TARNAME "gsl" | #define PACKAGE_VERSION "1.15" | #define PACKAGE_STRING "gsl 1.15" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "gsl" | #define VERSION "1.15" | #define RELEASED /**/ | /* end confdefs.h. */ | #include configure:4100: result: gcc -E configure:4120: gcc -E conftest.c configure:4120: $? = 0 configure:4134: gcc -E conftest.c conftest.c:12:28: fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:4134: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "gsl" | #define PACKAGE_TARNAME "gsl" | #define PACKAGE_VERSION "1.15" | #define PACKAGE_STRING "gsl 1.15" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "gsl" | #define VERSION "1.15" | #define RELEASED /**/ | /* end confdefs.h. */ | #include configure:4163: checking whether ln -s works configure:4167: result: yes configure:4220: checking how to print strings configure:4247: result: printf configure:4268: checking for a sed that does not truncate output configure:4332: result: /bin/sed configure:4350: checking for grep that handles long lines and -e configure:4408: result: /bin/grep configure:4413: checking for egrep configure:4475: result: /bin/grep -E configure:4480: checking for fgrep configure:4542: result: /bin/grep -F configure:4577: checking for ld used by gcc configure:4644: result: /usr/bin/ld configure:4651: checking if the linker (/usr/bin/ld) is GNU ld configure:4666: result: yes configure:4678: checking for BSD- or MS-compatible name lister (nm) configure:4727: result: /usr/bin/nm -B configure:4857: checking the name lister (/usr/bin/nm -B) interface configure:4864: gcc -c -g -O2 conftest.c >&5 configure:4867: /usr/bin/nm -B "conftest.o" configure:4870: output 0000000000000000 B some_variable configure:4877: result: BSD nm configure:4881: checking the maximum length of command line arguments configure:5006: result: 1572864 configure:5023: checking whether the shell understands some XSI constructs configure:5033: result: yes configure:5037: checking whether the shell understands "+=" configure:5043: result: yes configure:5078: checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format configure:5118: result: func_convert_file_noop configure:5125: checking how to convert x86_64-unknown-linux-gnu file names to toolchain format configure:5145: result: func_convert_file_noop configure:5152: checking for /usr/bin/ld option to reload object files configure:5159: result: -r configure:5233: checking for objdump configure:5249: found /usr/bin/objdump configure:5260: result: objdump configure:5292: checking how to recognize dependent libraries configure:5494: result: pass_all configure:5579: checking for dlltool configure:5609: result: no configure:5639: checking how to associate runtime and link libraries configure:5666: result: printf %s\n configure:5727: checking for ar configure:5743: found /usr/bin/ar configure:5754: result: ar configure:5791: checking for archiver @FILE support configure:5808: gcc -c -g -O2 conftest.c >&5 configure:5808: $? = 0 configure:5811: ar cru libconftest.a @conftest.lst >&5 configure:5814: $? = 0 configure:5819: ar cru libconftest.a @conftest.lst >&5 ar: conftest.o: No such file or directory configure:5822: $? = 1 configure:5834: result: @ configure:5892: checking for strip configure:5908: found /usr/bin/strip configure:5919: result: strip configure:5991: checking for ranlib configure:6007: found /usr/bin/ranlib configure:6018: result: ranlib configure:6120: checking command to parse /usr/bin/nm -B output from gcc object configure:6239: gcc -c -g -O2 conftest.c >&5 configure:6242: $? = 0 configure:6246: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm configure:6249: $? = 0 configure:6315: gcc -o conftest -g -O2 conftest.c conftstm.o >&5 configure:6318: $? = 0 configure:6356: result: ok configure:6393: checking for sysroot configure:6423: result: no configure:6500: gcc -c -g -O2 conftest.c >&5 configure:6503: $? = 0 configure:6666: checking for mt configure:6682: found /bin/mt configure:6693: result: mt configure:6716: checking if mt is a manifest tool configure:6722: mt '-?' configure:6730: result: no configure:7358: checking for ANSI C header files configure:7378: gcc -c -g -O2 conftest.c >&5 configure:7378: $? = 0 configure:7451: gcc -o conftest -g -O2 conftest.c >&5 configure:7451: $? = 0 configure:7451: ./conftest configure:7451: $? = 0 configure:7462: result: yes configure:7475: checking for sys/types.h configure:7475: gcc -c -g -O2 conftest.c >&5 configure:7475: $? = 0 configure:7475: result: yes configure:7475: checking for sys/stat.h configure:7475: gcc -c -g -O2 conftest.c >&5 configure:7475: $? = 0 configure:7475: result: yes configure:7475: checking for stdlib.h configure:7475: gcc -c -g -O2 conftest.c >&5 configure:7475: $? = 0 configure:7475: result: yes configure:7475: checking for string.h configure:7475: gcc -c -g -O2 conftest.c >&5 configure:7475: $? = 0 configure:7475: result: yes configure:7475: checking for memory.h configure:7475: gcc -c -g -O2 conftest.c >&5 configure:7475: $? = 0 configure:7475: result: yes configure:7475: checking for strings.h configure:7475: gcc -c -g -O2 conftest.c >&5 configure:7475: $? = 0 configure:7475: result: yes configure:7475: checking for inttypes.h configure:7475: gcc -c -g -O2 conftest.c >&5 configure:7475: $? = 0 configure:7475: result: yes configure:7475: checking for stdint.h configure:7475: gcc -c -g -O2 conftest.c >&5 configure:7475: $? = 0 configure:7475: result: yes configure:7475: checking for unistd.h configure:7475: gcc -c -g -O2 conftest.c >&5 configure:7475: $? = 0 configure:7475: result: yes configure:7489: checking for dlfcn.h configure:7489: gcc -c -g -O2 conftest.c >&5 configure:7489: $? = 0 configure:7489: result: yes configure:7676: checking for objdir configure:7691: result: .libs configure:7958: checking if gcc supports -fno-rtti -fno-exceptions configure:7976: gcc -c -g -O2 -fno-rtti -fno-exceptions conftest.c >&5 cc1: warning: command line option "-fno-rtti" is valid for C++/ObjC++ but not for C configure:7980: $? = 0 configure:7993: result: no configure:8303: checking for gcc option to produce PIC configure:8310: result: -fPIC -DPIC configure:8318: checking if gcc PIC flag -fPIC -DPIC works configure:8336: gcc -c -g -O2 -fPIC -DPIC -DPIC conftest.c >&5 configure:8340: $? = 0 configure:8353: result: yes configure:8382: checking if gcc static flag -static works configure:8410: result: yes configure:8425: checking if gcc supports -c -o file.o configure:8446: gcc -c -g -O2 -o out/conftest2.o conftest.c >&5 configure:8450: $? = 0 configure:8472: result: yes configure:8480: checking if gcc supports -c -o file.o configure:8527: result: yes configure:8560: checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:9718: result: yes configure:9755: checking whether -lc should be explicitly linked in configure:9763: gcc -c -g -O2 conftest.c >&5 configure:9766: $? = 0 configure:9781: gcc -shared -fPIC -DPIC conftest.o -v -Wl,-soname -Wl,conftest -o conftest 2\>\&1 \| /bin/grep -lc \>/dev/null 2\>\&1 configure:9784: $? = 0 configure:9798: result: no configure:9963: checking dynamic linker characteristics configure:10477: gcc -o conftest -g -O2 -Wl,-rpath -Wl,/foo conftest.c >&5 configure:10477: $? = 0 configure:10699: result: GNU/Linux ld.so configure:10806: checking how to hardcode library paths into programs configure:10831: result: immediate configure:11371: checking whether stripping libraries is possible configure:11376: result: yes configure:11411: checking if libtool supports shared libraries configure:11413: result: yes configure:11416: checking whether to build shared libraries configure:11437: result: yes configure:11440: checking whether to build static libraries configure:11444: result: yes configure:11480: checking for size_t configure:11480: gcc -c -g -O2 conftest.c >&5 configure:11480: $? = 0 configure:11480: gcc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:60:21: error: expected expression before ')' token configure:11480: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "gsl" | #define PACKAGE_TARNAME "gsl" | #define PACKAGE_VERSION "1.15" | #define PACKAGE_STRING "gsl 1.15" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "gsl" | #define VERSION "1.15" | #define RELEASED /**/ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((size_t))) | return 0; | ; | return 0; | } configure:11480: result: yes configure:11491: checking for working volatile configure:11510: gcc -c -g -O2 conftest.c >&5 configure:11510: $? = 0 configure:11517: result: yes configure:11525: checking for inline configure:11541: gcc -c -g -O2 conftest.c >&5 configure:11541: $? = 0 configure:11549: result: inline configure:11567: checking whether char is unsigned configure:11585: gcc -c -g -O2 conftest.c >&5 configure:11585: $? = 0 configure:11592: result: no configure:11690: checking for cos in -lm configure:11715: gcc -o conftest -g -O2 conftest.c -lm >&5 conftest.c:31:6: warning: conflicting types for built-in function 'cos' configure:11715: $? = 0 configure:11724: result: yes configure:11741: checking for GNU-style extern inline configure:11760: gcc -c -g -O2 conftest.c >&5 configure:11760: $? = 0 configure:11766: result: yes configure:11831: checking ieeefp.h usability configure:11831: gcc -c -g -O2 conftest.c >&5 conftest.c:58:20: fatal error: ieeefp.h: No such file or directory compilation terminated. configure:11831: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "gsl" | #define PACKAGE_TARNAME "gsl" | #define PACKAGE_VERSION "1.15" | #define PACKAGE_STRING "gsl 1.15" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "gsl" | #define VERSION "1.15" | #define RELEASED /**/ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_INLINE 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:11831: result: no configure:11831: checking ieeefp.h presence configure:11831: gcc -E conftest.c conftest.c:25:20: fatal error: ieeefp.h: No such file or directory compilation terminated. configure:11831: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "gsl" | #define PACKAGE_TARNAME "gsl" | #define PACKAGE_VERSION "1.15" | #define PACKAGE_STRING "gsl 1.15" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "gsl" | #define VERSION "1.15" | #define RELEASED /**/ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_INLINE 1 | /* end confdefs.h. */ | #include configure:11831: result: no configure:11831: checking for ieeefp.h configure:11831: result: no configure:11861: checking for vprintf configure:11861: gcc -o conftest -g -O2 conftest.c >&5 conftest.c:48:6: warning: conflicting types for built-in function 'vprintf' configure:11861: $? = 0 configure:11861: result: yes configure:11867: checking for _doprnt configure:11867: gcc -o conftest -g -O2 conftest.c >&5 /tmp/ccsho7Ur.o: In function `main': /Net/mus/data/arabidopsis/xiang/software/gsl-1.15/conftest.c:60: undefined reference to `_doprnt' collect2: ld returned 1 exit status configure:11867: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "gsl" | #define PACKAGE_TARNAME "gsl" | #define PACKAGE_VERSION "1.15" | #define PACKAGE_STRING "gsl 1.15" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "gsl" | #define VERSION "1.15" | #define RELEASED /**/ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_INLINE 1 | #define HAVE_VPRINTF 1 | /* end confdefs.h. */ | /* Define _doprnt to an innocuous variant, in case declares _doprnt. | For example, HP-UX 11i declares gettimeofday. */ | #define _doprnt innocuous__doprnt | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char _doprnt (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef _doprnt | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char _doprnt (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub__doprnt || defined __stub____doprnt | choke me | #endif | | int | main () | { | return _doprnt (); | ; | return 0; | } configure:11867: result: no configure:11879: checking for memcpy configure:11879: gcc -o conftest -g -O2 conftest.c >&5 conftest.c:49:6: warning: conflicting types for built-in function 'memcpy' configure:11879: $? = 0 configure:11879: result: yes configure:11892: checking for memmove configure:11892: gcc -o conftest -g -O2 conftest.c >&5 conftest.c:50:6: warning: conflicting types for built-in function 'memmove' configure:11892: $? = 0 configure:11892: result: yes configure:11905: checking for strdup configure:11905: gcc -o conftest -g -O2 conftest.c >&5 conftest.c:51:6: warning: conflicting types for built-in function 'strdup' configure:11905: $? = 0 configure:11905: result: yes configure:11918: checking for strtol configure:11918: gcc -o conftest -g -O2 conftest.c >&5 configure:11918: $? = 0 configure:11918: result: yes configure:11931: checking for strtoul configure:11931: gcc -o conftest -g -O2 conftest.c >&5 configure:11931: $? = 0 configure:11931: result: yes configure:11946: checking for EXIT_SUCCESS and EXIT_FAILURE configure:11970: result: yes configure:11981: checking for cos in -lm configure:12015: result: yes configure:12028: checking whether feenableexcept is declared configure:12028: gcc -c -g -O2 conftest.c >&5 configure:12028: $? = 0 configure:12028: result: yes configure:12041: checking whether fesettrapenable is declared configure:12041: gcc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:44:10: error: 'fesettrapenable' undeclared (first use in this function) conftest.c:44:10: note: each undeclared identifier is reported only once for each function it appears in configure:12041: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "gsl" | #define PACKAGE_TARNAME "gsl" | #define PACKAGE_VERSION "1.15" | #define PACKAGE_STRING "gsl 1.15" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "gsl" | #define VERSION "1.15" | #define RELEASED /**/ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_INLINE 1 | #define HAVE_VPRINTF 1 | #define HAVE_MEMCPY 1 | #define HAVE_MEMMOVE 1 | #define HAVE_STRDUP 1 | #define HAVE_STRTOL 1 | #define HAVE_STRTOUL 1 | #define HAVE_EXIT_SUCCESS_AND_FAILURE 1 | #define HAVE_LIBM 1 | #define HAVE_DECL_FEENABLEEXCEPT 1 | /* end confdefs.h. */ | #define _GNU_SOURCE 1 | #include | | int | main () | { | #ifndef fesettrapenable | #ifdef __cplusplus | (void) fesettrapenable; | #else | (void) fesettrapenable; | #endif | #endif | | ; | return 0; | } configure:12041: result: no configure:12054: checking whether hypot is declared configure:12054: gcc -c -g -O2 conftest.c >&5 configure:12054: $? = 0 configure:12054: result: yes configure:12066: checking whether expm1 is declared configure:12066: gcc -c -g -O2 conftest.c >&5 configure:12066: $? = 0 configure:12066: result: yes configure:12078: checking whether acosh is declared configure:12078: gcc -c -g -O2 conftest.c >&5 configure:12078: $? = 0 configure:12078: result: yes configure:12090: checking whether asinh is declared configure:12090: gcc -c -g -O2 conftest.c >&5 configure:12090: $? = 0 configure:12090: result: yes configure:12102: checking whether atanh is declared configure:12102: gcc -c -g -O2 conftest.c >&5 configure:12102: $? = 0 configure:12102: result: yes configure:12114: checking whether ldexp is declared configure:12114: gcc -c -g -O2 conftest.c >&5 configure:12114: $? = 0 configure:12114: result: yes configure:12126: checking whether frexp is declared configure:12126: gcc -c -g -O2 conftest.c >&5 configure:12126: $? = 0 configure:12126: result: yes configure:12138: checking whether fprnd_t is declared configure:12138: gcc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:51:10: error: 'fprnd_t' undeclared (first use in this function) conftest.c:51:10: note: each undeclared identifier is reported only once for each function it appears in configure:12138: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "gsl" | #define PACKAGE_TARNAME "gsl" | #define PACKAGE_VERSION "1.15" | #define PACKAGE_STRING "gsl 1.15" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "gsl" | #define VERSION "1.15" | #define RELEASED /**/ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_INLINE 1 | #define HAVE_VPRINTF 1 | #define HAVE_MEMCPY 1 | #define HAVE_MEMMOVE 1 | #define HAVE_STRDUP 1 | #define HAVE_STRTOL 1 | #define HAVE_STRTOUL 1 | #define HAVE_EXIT_SUCCESS_AND_FAILURE 1 | #define HAVE_LIBM 1 | #define HAVE_DECL_FEENABLEEXCEPT 1 | #define HAVE_DECL_FESETTRAPENABLE 0 | #define HAVE_DECL_HYPOT 1 | #define HAVE_DECL_EXPM1 1 | #define HAVE_DECL_ACOSH 1 | #define HAVE_DECL_ASINH 1 | #define HAVE_DECL_ATANH 1 | #define HAVE_DECL_LDEXP 1 | #define HAVE_DECL_FREXP 1 | /* end confdefs.h. */ | #include | | int | main () | { | #ifndef fprnd_t | #ifdef __cplusplus | (void) fprnd_t; | #else | (void) fprnd_t; | #endif | #endif | | ; | return 0; | } configure:12138: result: no configure:12150: checking whether isinf is declared configure:12150: gcc -c -g -O2 conftest.c >&5 configure:12150: $? = 0 configure:12150: result: yes configure:12162: checking whether isfinite is declared configure:12162: gcc -c -g -O2 conftest.c >&5 configure:12162: $? = 0 configure:12162: result: yes configure:12174: checking whether finite is declared configure:12174: gcc -c -g -O2 conftest.c >&5 configure:12174: $? = 0 configure:12174: result: yes configure:12189: checking whether isnan is declared configure:12189: gcc -c -g -O2 conftest.c >&5 configure:12189: $? = 0 configure:12189: result: yes configure:12208: checking whether log1p is declared configure:12208: gcc -c -g -O2 conftest.c >&5 configure:12208: $? = 0 configure:12208: result: yes configure:12223: checking for long double stdio configure:12244: gcc -o conftest -g -O2 conftest.c -lm >&5 configure:12244: $? = 0 configure:12244: ./conftest 1.234 configure:12244: $? = 0 configure:12254: result: yes configure:12263: checking for extended floating point registers configure:12296: result: yes configure:12305: checking for IEEE arithmetic interface type configure:12368: result: gnux86 configure:12372: checking for FPU_SETCW configure:12394: gcc -c -g -O2 conftest.c >&5 configure:12394: $? = 0 configure:12402: result: yes configure:12407: checking for SSE extensions configure:12451: gcc -o conftest -g -O2 conftest.c -lm >&5 configure:12451: $? = 0 configure:12451: ./conftest configure:12451: $? = 0 configure:12461: result: yes configure:12498: checking for IEEE compiler flags configure:12537: result: none configure:12546: checking for IEEE comparisons configure:12567: gcc -o conftest -g -O2 conftest.c -lm >&5 conftest.c: In function 'main': conftest.c:60:4: warning: incompatible implicit declaration of built-in function 'exit' configure:12567: $? = 0 configure:12567: ./conftest configure:12567: $? = 0 configure:12578: result: yes configure:12587: checking for IEEE denormalized values configure:12609: gcc -o conftest -g -O2 conftest.c -lm >&5 conftest.c: In function 'main': conftest.c:62:4: warning: incompatible implicit declaration of built-in function 'exit' configure:12609: $? = 0 configure:12609: ./conftest configure:12609: $? = 0 configure:12620: result: yes configure:12787: creating ./config.status ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by gsl config.status 1.15, which was generated by GNU Autoconf 2.68. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status on rabid config.status:1199: creating gsl_version.h config.status:1199: creating gsl.spec config.status:1199: creating gsl/Makefile config.status:1199: creating test/Makefile config.status:1199: creating err/Makefile config.status:1199: creating sys/Makefile config.status:1199: creating utils/Makefile config.status:1199: creating const/Makefile config.status:1199: creating min/Makefile config.status:1199: creating multimin/Makefile config.status:1199: creating ieee-utils/Makefile config.status:1199: creating fft/Makefile config.status:1199: creating specfunc/Makefile config.status:1199: creating dht/Makefile config.status:1199: creating fit/Makefile config.status:1199: creating multifit/Makefile config.status:1199: creating bspline/Makefile config.status:1199: creating statistics/Makefile config.status:1199: creating sum/Makefile config.status:1199: creating roots/Makefile config.status:1199: creating multiroots/Makefile config.status:1199: creating ntuple/Makefile config.status:1199: creating poly/Makefile config.status:1199: creating qrng/Makefile config.status:1199: creating rng/Makefile config.status:1199: creating randist/Makefile config.status:1199: creating siman/Makefile config.status:1199: creating integration/Makefile config.status:1199: creating interpolation/Makefile config.status:1199: creating doc/Makefile config.status:1199: creating block/Makefile config.status:1199: creating vector/Makefile config.status:1199: creating matrix/Makefile config.status:1199: creating histogram/Makefile config.status:1199: creating monte/Makefile config.status:1199: creating ode-initval/Makefile config.status:1199: creating ode-initval2/Makefile config.status:1199: creating cblas/Makefile config.status:1199: creating blas/Makefile config.status:1199: creating linalg/Makefile config.status:1199: creating eigen/Makefile config.status:1199: creating permutation/Makefile config.status:1199: creating combination/Makefile config.status:1199: creating multiset/Makefile config.status:1199: creating sort/Makefile config.status:1199: creating complex/Makefile config.status:1199: creating diff/Makefile config.status:1199: creating deriv/Makefile config.status:1199: creating cheb/Makefile config.status:1199: creating cdf/Makefile config.status:1199: creating wavelet/Makefile config.status:1199: creating Makefile config.status:1199: creating config.h config.status:1380: config.h is unchanged config.status:1428: executing depfiles commands config.status:1428: executing libtool commands ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-unknown-linux-gnu ac_cv_c_char_unsigned=no ac_cv_c_compiler_gnu=yes ac_cv_c_extended_fp=yes ac_cv_c_extern_inline=yes ac_cv_c_fpu_setcw=yes ac_cv_c_fpu_sse=yes ac_cv_c_ieee_comparisons=yes ac_cv_c_ieee_denormals=yes ac_cv_c_ieee_flags=none ac_cv_c_ieee_interface=gnux86 ac_cv_c_inline=inline ac_cv_c_volatile=yes ac_cv_decl_exit_success_and_failure=yes ac_cv_env_CC_set= ac_cv_env_CC_value= ac_cv_env_CFLAGS_set= ac_cv_env_CFLAGS_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_func__doprnt=no ac_cv_func_memcpy=yes ac_cv_func_memmove=yes ac_cv_func_printf_longdouble=yes ac_cv_func_strdup=yes ac_cv_func_strtol=yes ac_cv_func_strtoul=yes ac_cv_func_vprintf=yes ac_cv_have_decl_acosh=yes ac_cv_have_decl_asinh=yes ac_cv_have_decl_atanh=yes ac_cv_have_decl_expm1=yes ac_cv_have_decl_feenableexcept=yes ac_cv_have_decl_fesettrapenable=no ac_cv_have_decl_finite=yes ac_cv_have_decl_fprnd_t=no ac_cv_have_decl_frexp=yes ac_cv_have_decl_hypot=yes ac_cv_have_decl_isfinite=yes ac_cv_have_decl_isinf=yes ac_cv_have_decl_isnan=yes ac_cv_have_decl_ldexp=yes ac_cv_have_decl_log1p=yes ac_cv_header_dlfcn_h=yes ac_cv_header_ieeefp_h=no ac_cv_header_inttypes_h=yes ac_cv_header_memory_h=yes ac_cv_header_stdc=yes ac_cv_header_stdint_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-unknown-linux-gnu ac_cv_lib_m_cos=yes ac_cv_objext=o ac_cv_path_EGREP='/bin/grep -E' ac_cv_path_FGREP='/bin/grep -F' ac_cv_path_GREP=/bin/grep ac_cv_path_SED=/bin/sed ac_cv_path_install='/usr/bin/install -c' ac_cv_path_mkdir=/bin/mkdir ac_cv_prog_AWK=mawk ac_cv_prog_CPP='gcc -E' ac_cv_prog_ac_ct_AR=ar ac_cv_prog_ac_ct_CC=gcc ac_cv_prog_ac_ct_MANIFEST_TOOL=mt ac_cv_prog_ac_ct_OBJDUMP=objdump ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_ac_ct_STRIP=strip ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_make_make_set=yes ac_cv_type_size_t=yes am_cv_CC_dependencies_compiler_type=gcc3 lt_cv_ar_at_file=@ lt_cv_archive_cmds_need_lc=no lt_cv_deplibs_check_method=pass_all lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file= lt_cv_ld_reload_flag=-r lt_cv_nm_interface='BSD nm' lt_cv_objdir=.libs lt_cv_path_LD=/usr/bin/ld lt_cv_path_NM='/usr/bin/nm -B' lt_cv_path_mainfest_tool=no lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_pic='-fPIC -DPIC' lt_cv_prog_compiler_pic_works=yes lt_cv_prog_compiler_rtti_exceptions=no lt_cv_prog_compiler_static_works=yes lt_cv_prog_gnu_ld=yes lt_cv_sharedlib_from_linklib_cmd='printf %s\n' lt_cv_shlibpath_overrides_runpath=no lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\''' lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ {"\2", (void *) \&\2},/p'\''' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \(lib[^ ]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ {"lib\2", (void *) \&\2},/p'\''' lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\''' lt_cv_sys_max_cmd_len=1572864 lt_cv_to_host_file_cmd=func_convert_file_noop lt_cv_to_tool_file_cmd=func_convert_file_noop ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} /Net/mus/data/arabidopsis/xiang/software/gsl-1.15/missing --run aclocal-1.11' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='${SHELL} /Net/mus/data/arabidopsis/xiang/software/gsl-1.15/missing --run tar' AR='ar' AUTOCONF='${SHELL} /Net/mus/data/arabidopsis/xiang/software/gsl-1.15/missing --run autoconf' AUTOHEADER='${SHELL} /Net/mus/data/arabidopsis/xiang/software/gsl-1.15/missing --run autoheader' AUTOMAKE='${SHELL} /Net/mus/data/arabidopsis/xiang/software/gsl-1.15/missing --run automake-1.11' AWK='mawk' CC='gcc' CCDEPMODE='depmode=gcc3' CFLAGS='-g -O2' CPP='gcc -E' CPPFLAGS='' CYGPATH_W='echo' DEFS='-DHAVE_CONFIG_H' DEPDIR='.deps' DLLTOOL='false' DSYMUTIL='' DUMPBIN='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/bin/grep -E' EXEEXT='' FGREP='/bin/grep -F' GREP='/bin/grep' GSL_CFLAGS='-I${prefix}/include' GSL_LIBM='-lm' GSL_LIBS='-L${exec_prefix}/lib -lgsl' GSL_LT_CBLAS_VERSION='0:0:0' GSL_LT_VERSION='16:0:16' GSL_MAJOR_VERSION='1' GSL_MINOR_VERSION='15' HAVE_AIX_IEEE_INTERFACE='' HAVE_DARWIN86_IEEE_INTERFACE='' HAVE_DARWIN_IEEE_INTERFACE='' HAVE_FREEBSD_IEEE_INTERFACE='' HAVE_GNUM68K_IEEE_INTERFACE='' HAVE_GNUPPC_IEEE_INTERFACE='' HAVE_GNUSPARC_IEEE_INTERFACE='' HAVE_GNUX86_IEEE_INTERFACE='' HAVE_HPUX11_IEEE_INTERFACE='' HAVE_HPUX_IEEE_INTERFACE='' HAVE_IRIX_IEEE_INTERFACE='' HAVE_NETBSD_IEEE_INTERFACE='' HAVE_OPENBSD_IEEE_INTERFACE='' HAVE_OS2EMX_IEEE_INTERFACE='' HAVE_SOLARIS_IEEE_INTERFACE='' HAVE_SUNOS4_IEEE_INTERFACE='' HAVE_TRU64_IEEE_INTERFACE='' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' LD='/usr/bin/ld -m elf_x86_64' LDFLAGS='' LIBM='-lm' LIBOBJS='' LIBS='-lm ' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LIPO='' LN_S='ln -s' LTLIBOBJS='' MAINT='#' MAINTAINER_MODE_FALSE='' MAINTAINER_MODE_TRUE='#' MAKEINFO='${SHELL} /Net/mus/data/arabidopsis/xiang/software/gsl-1.15/missing --run makeinfo' MANIFEST_TOOL=':' MINGW32_HOST_FALSE='' MINGW32_HOST_TRUE='#' MKDIR_P='/bin/mkdir -p' NM='/usr/bin/nm -B' NMEDIT='' OBJDUMP='objdump' OBJEXT='o' OTOOL64='' OTOOL='' PACKAGE='gsl' PACKAGE_BUGREPORT='' PACKAGE_NAME='gsl' PACKAGE_STRING='gsl 1.15' PACKAGE_TARNAME='gsl' PACKAGE_URL='' PACKAGE_VERSION='1.15' PATH_SEPARATOR=':' RANLIB='ranlib' SED='/bin/sed' SET_MAKE='' SHELL='/bin/bash' STRIP='strip' VERSION='1.15' ac_ct_AR='ar' ac_ct_CC='gcc' ac_ct_DUMPBIN='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='#' am__fastdepCC_FALSE='#' am__fastdepCC_TRUE='' am__include='include' am__isrc='' am__leading_dot='.' am__quote='' am__tar='${AMTAR} chof - "$$tardir"' am__untar='${AMTAR} xf -' bindir='${exec_prefix}/bin' build='x86_64-unknown-linux-gnu' build_alias='' build_cpu='x86_64' build_os='linux-gnu' build_vendor='unknown' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exec_prefix='${prefix}' host='x86_64-unknown-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='unknown' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /Net/mus/data/arabidopsis/xiang/software/gsl-1.15/install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' mkdir_p='/bin/mkdir -p' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/Net/mus/data/arabidopsis/xiang/software/gsl-lib' program_transform_name='s,x,x,' psdir='${docdir}' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='${prefix}/etc' target_alias='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "gsl" #define PACKAGE_TARNAME "gsl" #define PACKAGE_VERSION "1.15" #define PACKAGE_STRING "gsl 1.15" #define PACKAGE_BUGREPORT "" #define PACKAGE_URL "" #define PACKAGE "gsl" #define VERSION "1.15" #define RELEASED /**/ #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" #define HAVE_INLINE 1 #define HAVE_VPRINTF 1 #define HAVE_MEMCPY 1 #define HAVE_MEMMOVE 1 #define HAVE_STRDUP 1 #define HAVE_STRTOL 1 #define HAVE_STRTOUL 1 #define HAVE_EXIT_SUCCESS_AND_FAILURE 1 #define HAVE_LIBM 1 #define HAVE_DECL_FEENABLEEXCEPT 1 #define HAVE_DECL_FESETTRAPENABLE 0 #define HAVE_DECL_HYPOT 1 #define HAVE_DECL_EXPM1 1 #define HAVE_DECL_ACOSH 1 #define HAVE_DECL_ASINH 1 #define HAVE_DECL_ATANH 1 #define HAVE_DECL_LDEXP 1 #define HAVE_DECL_FREXP 1 #define HAVE_DECL_FPRND_T 0 #define HAVE_DECL_ISINF 1 #define HAVE_DECL_ISFINITE 1 #define HAVE_DECL_FINITE 1 #define HAVE_DECL_ISNAN 1 #define HAVE_DECL_LOG1P 1 #define HAVE_PRINTF_LONGDOUBLE 1 #define HAVE_EXTENDED_PRECISION_REGISTERS 1 #define HAVE_FPU_X86_SSE 1 #define HAVE_GNUX86_IEEE_INTERFACE 1 #define HAVE_IEEE_COMPARISONS 1 #define HAVE_IEEE_DENORMALS 1 configure: exit 0