BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q1HDS8 (62 letters) Database: para.tmp/uniprot.xeno.fa 6,121,393 sequences; 1,813,306,667 total letters Searching..................................................done ***** No hits found ****** Searching..................................................done ***** No hits found ****** Database: para.tmp/uniprot.xeno.fa Posted date: Apr 11, 2009 1:32 PM Number of letters in database: 999,999,610 Number of sequences in database: 3,169,277 Database: para.tmp/uniprot.xeno.fa.01 Posted date: Apr 11, 2009 1:35 PM Number of letters in database: 813,307,057 Number of sequences in database: 2,952,116 Lambda K H 0.331 0.145 0.552 Lambda K H 0.267 0.0457 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 effective search space used: 44945020540 T: 11 A: 40 X1: 16 ( 7.6 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.9 bits) S2: 72 (32.2 bits)