# This is example broadPeak from HAIB. It uses the following features: # - It is tab delimited # - It is using -1 for p and q value, as well as floats line 1 and 2 # - It is using . for strand as well as a + and a - line 3 and line 4 # - It has chrY and chrX # - exponential floats line 5 # - Zero length item line 7 # We may consider adding the following positive tests in here # - ChrM # - Spaces and not tabs # It could be used to test # - validateFiles -type=bed6+ # - validateFiles -type=bed6+3 -as=broadPeak.as # - validateFiles -type=broadPeak chr1 808464 808692 peak1 78 . 252.860 -1 -1 chr1 929191 929415 peak2 59 . 192.380 10.32 20.30008 chr1 936069 936461 peak3 156 + 506.900 -1 -1 chr1 966907 967091 peak4 46 - 200 -1 -1 chr1 976506 976637 peak5 39 . 4.14486e+06 -1 -1 chr1 1001036 1001260 peak6 121 . 393.460 -1 -1 chr1 1014777 1014778 peak7 307 . 995.120 -1 -1 chr1 1015465 1015913 peak8 833 . 2693.500 -1 -1 chr1 1047366 1047635 peak9 47 . 152.900 -1 -1 chr1 1051491 1051822 peak10 30 . 100.170 -1 -1 chr1 1071840 1072083 peak11 34 . 111.310 -1 -1 chr1 1072155 1072362 peak12 44 . 144.050 -1 -1 chr1 1083989 1084289 peak13 68 . 220.940 -1 -1 chr1 1109570 1109867 peak14 64 . 209.810 -1 -1 chr1 1167284 1167612 peak15 860 . 2783.020 -1 -1 chr1 1239956 1240498 peak16 647 . 2092.240 -1 -1 chr1 1244011 1244294 peak17 78 . 253.500 -1 -1 chr1 1245064 1245464 peak18 212 . 686.410 -1 -1 chr1 1250735 1251038 peak19 96 . 312.270 -1 -1 chr1 1342515 1342791 peak20 52 . 171.090 -1 -1 chr1 1440376 1440638 peak21 75 . 243.120 -1 -1 chr1 1446419 1446805 peak22 71 . 231.760 -1 -1 chr1 1474657 1474894 peak23 47 . 152.860 -1 -1 chr1 1508839 1509167 peak24 154 . 500.540 -1 -1 chr1 1549870 1550162 peak25 131 . 424.460 -1 -1 chr1 1706756 1707062 peak26 46 . 150.400 -1 -1 chr1 1710176 1710538 peak27 178 . 578.630 -1 -1 chr1 1840680 1840901 peak28 61 . 198.850 -1 -1 chr1 1850587 1851280 peak29 96 . 311.380 -1 -1 chr1 1980764 1981126 peak30 73 . 238.940 -1 -1 chr1 2057723 2058144 peak31 223 . 723.710 -1 -1 chr1 2126646 2126938 peak32 32 . 105.680 -1 -1 chr1 2135790 2136093 peak33 54 . 177.270 -1 -1 chr1 2242872 2243294 peak34 230 . 744.760 -1 -1 chr1 2313992 2314299 peak35 52 . 169.500 -1 -1 chr1 2340404 2340568 peak36 59 . 192.980 -1 -1 chr1 2345336 2345630 peak37 61 . 199.110 -1 -1 chr1 2349758 2349985 peak38 32 . 103.540 -1 -1 chr1 2458214 2458547 peak39 170 . 551.990 -1 -1 chr1 2472017 2472228 peak40 37 . 120.160 -1 -1 chr1 2477306 2477755 peak41 891 . 2883.010 -1 -1 chr1 2480185 2480463 peak42 137 . 445.370 -1 -1 chr1 2515188 2515665 peak43 390 . 1262.680 -1 -1 chr1 2560124 2560396 peak44 34 . 111.560 -1 -1 chr1 2574284 2574556 peak45 32 . 104.240 -1 -1 chr1 3234012 3234230 peak46 49 . 160.920 -1 -1 chr1 3333576 3333836 peak47 37 . 120.040 -1 -1 chr1 3370799 3371148 peak48 384 . 1243.960 -1 -1 chr1 3448093 3448350 peak49 88 . 285.710 -1 -1 chr1 3464092 3464370 peak50 74 . 241.420 -1 -1 chrY 13456912 13457372 peak24127 130 . 420.320 -1 -1 chrY 13457769 13458091 peak24128 51 . 165.950 -1 -1 chrY 13458278 13458839 peak24129 213 . 690.610 -1 -1 chrY 13459205 13459428 peak24130 37 . 122.560 -1 -1 chrY 13460140 13460334 peak24131 33 . 106.960 -1 -1 chrY 13460337 13460653 peak24132 90 . 292.730 -1 -1 chrY 13460658 13461509 peak24133 535 . 1730.200 -1 -1 chrY 13463161 13463361 peak24134 36 . 117.130 -1 -1 chrY 13463693 13463933 peak24135 40 . 129.670 -1 -1 chrY 13464381 13465236 peak24136 406 . 1313.680 -1 -1 chrY 13465277 13465595 peak24137 90 . 291.930 -1 -1 chrY 13465779 13466397 peak24138 253 . 818.170 -1 -1 chrY 13466418 13467000 peak24139 250 . 808.790 -1 -1 chrY 13467204 13468838 peak24140 754 . 2437.920 -1 -1 chrY 13469194 13469584 peak24141 86 . 278.390 -1 -1 chrY 13469855 13470191 peak24142 80 . 259.120 -1 -1 chrY 13472310 13472800 peak24143 95 . 307.940 -1 -1 chrY 13804742 13804921 peak24174 34 . 111.200 -1 -1 chrY 13806098 13806255 peak24175 48 . 157.430 -1 -1 chrX 288434 288647 peak23588 34 . 112.040 -1 -1 chrX 292003 292308 peak23589 100 . 324.850 -1 -1 chrX 2033540 2033793 peak23600 53 . 171.620 -1 -1 chrX 2168209 2168404 peak23601 34 . 112.040 -1 -1 chrX 2190424 2190772 peak23602 335 . 1084.060 -1 -1 chrX 2343737 2343989 peak23603 33 . 109.510 -1 -1 chrX 2416427 2416767 peak23604 145 . 471.500 -1 -1 chrX 2533300 2533532 peak23605 39 . 129.090 -1 -1 chrX 2721624 2721844 peak23606 63 . 204.750 -1 -1 chrX 2809613 2809877 peak23607 49 . 158.470 -1 -1