# This is example bedLogR (bed9+1) from HAIB. It uses the following features: # - It is tab delimited # - The final float number is positive and negative and has an integer # It could be used to test # - validateFiles -type=bed9+1 -as=bedRrbs.as chr10 88874 114779 normal 0 + 88874 114779 0,0,0 0.0909 chr10 124767 37338689 het.del 0 + 124767 37338689 255,153,51 -0.2354 chr10 37342776 37347942 het.del 0 + 37342776 37347942 255,153,51 -0.8807 chr10 37349436 38410660 het.del 0 + 37349436 38410660 255,153,51 -0.2534 chr10 38415965 38725007 amp 0 + 38415965 38725007 0,0,255 0 chr10 55086553 55088289 het.del 0 + 55086553 55088289 255,153,51 -0.7122 chr10 55093531 59199425 normal 0 + 55093531 59199425 0,0,0 8 chr10 59210800 59211698 homo.del 0 + 59210800 59211698 255,0,0 -4.1571 chr10 59217371 93255156 normal 0 + 59217371 93255156 0,0,0 0.0311 chr10 93262981 93412994 normal 0 + 93262981 93412994 0,0,0 0.1907 chr10 93413986 109749174 normal 0 + 93413986 109749174 0,0,0 0.0297 chr10 109755896 109931039 het.del 0 + 109755896 109931039 255,153,51 -0.8819 chr10 109932297 114369434 normal 0 + 109932297 114369434 0,0,0 0.0147 chr10 114372021 114418948 het.del 0 + 114372021 114418948 255,153,51 -0.2487 chr10 114423919 135522754 normal 0 + 114423919 135522754 0,0,0 0.0249 chr11 155190 1805571 het.del 0 + 155190 1805571 255,153,51 -0.2162 chr11 1807114 2171922 het.del 0 + 1807114 2171922 255,153,51 -0.6655 chr11 2173447 2898749 het.del 0 + 2173447 2898749 255,153,51 -0.2034 chr11 2900418 10997949 normal 0 + 2900418 10997949 0,0,0 0.1386 chr11 11004821 11827861 amp 0 + 11004821 11827861 0,0,255 0.3048 chr11 11829799 11976628 amp 0 + 11829799 11976628 0,0,255 0.4942 chr11 11976691 11999503 amp 0 + 11976691 11999503 0,0,255 0.2878 chr11 12000778 16634707 normal 0 + 12000778 16634707 0,0,0 0.0709 chr11 16641718 16777342 amp 0 + 16641718 16777342 0,0,255 0.2276 chr11 16777416 22418380 normal 0 + 16777416 22418380 0,0,0 0.0769 chr11 22421282 23259996 het.del 0 + 22421282 23259996 255,153,51 -0.256 chr11 23262395 24145350 normal 0 + 23262395 24145350 0,0,0 0.0279 chr11 24149804 24545353 het.del 0 + 24149804 24545353 255,153,51 -0.2619 chr11 28545064 28612392 het.del 0 + 28545064 28612392 255,153,51 -0.221 chr11 48964419 49838613 amp 0 + 48964419 49838613 0,0,255 0.3849 chr11 49843560 50599218 normal 0 + 49843560 50599218 0,0,0 0.0392 chr11 55367889 55452923 het.del 0 + 55367889 55452923 255,153,51 -0.6552 chr11 55460095 89620140 normal 0 + 55460095 89620140 0,0,0 0.1323 chr11 89620654 89656481 normal 0 + 89620654 89656481 0,0,0 -0.0683 chr11 89661221 91680278 normal 0 + 89661221 91680278 0,0,0 0.1746 chr11 91681310 92727874 normal 0 + 91681310 92727874 0,0,0 -0.0215 chr11 92733541 93682348 amp 0 + 92733541 93682348 0,0,255 0.3768 chr1 167858881 167933549 amp 0 + 167858881 167933549 0,0,255 0.3208 chr1 167934422 174242805 normal 0 + 167934422 174242805 0,0,0 0.1269 chr1 174246712 174543850 normal 0 + 174246712 174543850 0,0,0 -0.0994 chr1 174546936 214762003 normal 0 + 174546936 214762003 0,0,0 0.1477 chr1 214762772 236155817 normal 0 + 214762772 236155817 0,0,0 -0.0923 chr1 236157123 249222473 normal 0 + 236157123 249222473 0,0,0 0.0998 chr20 63244 25767347 het.del 0 + 63244 25767347 255,153,51 -0.2278 chr20 25768056 26085338 normal 0 + 25768056 26085338 0,0,0 -0.0307 chr20 26088528 26289012 het.del 0 + 26088528 26289012 255,153,51 -0.2159 chr21 21608834 21619595 homo.del 0 + 21608834 21619595 255,0,0 -4.6614 chr21 21620911 48103851 normal 0 + 21620911 48103851 0,0,0 0.0084 chr22 16076412 21463730 normal 0 + 16076412 21463730 0,0,0 -0.1886 chr22 21465780 21706670 normal 0 + 21465780 21706670 0,0,0 0.0076 chr22 21717298 36571379 normal 0 + 21717298 36571379 0,0,0 -0.1844 chr22 36571916 36574767 homo.del 0 + 36571916 36574767 255,0,0 -4.977 chr22 36575664 51235401 normal 0 + 36575664 51235401 0,0,0 -0.1932 chr2 18674 6298022 normal 0 + 18674 6298022 0,0,0 0.0039 chr2 6298361 6307401 het.del 0 + 6298361 6307401 255,153,51 -0.9044 chr2 6308120 18458083 normal 0 + 6308120 18458083 0,0,0 -0.001 chr2 18458864 18477004 amp 0 + 18458864 18477004 0,0,255 0.4327 chr2 18479749 41171520 normal 0 + 18479749 41171520 0,0,0 0.0226 chr2 41180319 41853654 het.del 0 + 41180319 41853654 255,153,51 -0.2474 chr2 41856087 89986765 normal 0 + 41856087 89986765 0,0,0 0.0375 chr2 89987047 90006109 het.del 0 + 89987047 90006109 255,153,51 -0.7603 chr2 106762366 106954287 het.del 0 + 106762366 106954287 255,153,51 -0.2242 chr2 106957629 107081467 normal 0 + 106957629 107081467 0,0,0 -0.0476 chr2 107086603 119056234 het.del 0 + 107086603 119056234 255,153,51 -0.226