#include "common.h"
#include "cheapcgi.h"
#include "hgTrackUi.h"
#include "jksql.h"
#include "hdb.h"
#include "hui.h"
#include "trackDb.h"
#include "customTrack.h"
#include "encode/encodePeak.h"
void encodePeakUi(struct trackDb *tdb, struct customTrack *ct)
/* ENCODE peak UI options. */
{
struct sqlConnection *conn;
char *table;
char *trackName = tdb->track;
char pValVarName[256];
char qValVarName[256];
char scoreVarName[256];
boolean useScore = FALSE;
if (ct)
{
conn = hAllocConn(CUSTOM_TRASH);
table = ct->dbTableName;
}
else
{
conn = hAllocConn(database);
table = tdb->table;
if (!trackDbSettingOn(tdb, "filterPvalQval"))
useScore = TRUE;
}
cgiDown(0.7);
if (useScore)
{
safef(scoreVarName, sizeof(scoreVarName), "%s.%s", trackName, ENCODE_PEAK_SCORE_FILTER_SUFFIX);
puts("
Minimum score (0-1000):");
cgiMakeTextVar(scoreVarName, cartCgiUsualString(cart, scoreVarName, "0"), 4);
int scoreMax = atoi(trackDbSettingOrDefault(tdb, "scoreMax", "1000"));
scoreGrayLevelCfgUi(cart, tdb, trackName, scoreMax);
}
else
{
safef(pValVarName, sizeof(pValVarName), "%s.%s", trackName, ENCODE_PEAK_PVAL_FILTER_SUFFIX);
safef(qValVarName, sizeof(qValVarName), "%s.%s", trackName, ENCODE_PEAK_QVAL_FILTER_SUFFIX);
puts("
Minimum p-value (-log10):");
cgiMakeTextVar(pValVarName, cartCgiUsualString(cart, pValVarName, "0.00"), 6);
puts("
Minimum q-value:");
cgiMakeTextVar(qValVarName, cartCgiUsualString(cart, qValVarName, "0.00"), 6);
}
hFreeConn(&conn);
}