/* chicken13kInfo.h was originally generated by the autoSql program, which also * generated chicken13kInfo.c and chicken13kInfo.sql. This header links the database and * the RAM representation of objects. */ #ifndef CHICKEN13KINFO_H #define CHICKEN13KINFO_H #ifndef JKSQL_H #include "jksql.h" #endif #define CHICKEN13KINFO_NUM_COLS 12 struct chicken13kInfo /* Extra information for the chicken 13k probes. */ { struct chicken13kInfo *next; /* Next in singly linked list. */ char *id; /* ID of the probe */ char *source; /* Source of the probe */ char pcr[2]; /* PCR Amp Code */ char *library; /* Library */ char *clone; /* Source Clone Name */ char *gbkAcc; /* Genbank accession */ char *blat; /* BLAT alignments */ char *sourceAnnot; /* Source assigned annotation */ char *tigrTc; /* TIGR assigned TC */ char *tigrTcAnnot; /* TIGR TC annotation */ char *blastAnnot; /* BLAST determined annotation */ char *comment; /* Comment */ }; void chicken13kInfoStaticLoad(char **row, struct chicken13kInfo *ret); /* Load a row from chicken13kInfo table into ret. The contents of ret will * be replaced at the next call to this function. */ struct chicken13kInfo *chicken13kInfoLoad(char **row); /* Load a chicken13kInfo from row fetched with select * from chicken13kInfo * from database. Dispose of this with chicken13kInfoFree(). */ struct chicken13kInfo *chicken13kInfoLoadAll(char *fileName); /* Load all chicken13kInfo from whitespace-separated file. * Dispose of this with chicken13kInfoFreeList(). */ struct chicken13kInfo *chicken13kInfoLoadAllByChar(char *fileName, char chopper); /* Load all chicken13kInfo from chopper separated file. * Dispose of this with chicken13kInfoFreeList(). */ #define chicken13kInfoLoadAllByTab(a) chicken13kInfoLoadAllByChar(a, '\t'); /* Load all chicken13kInfo from tab separated file. * Dispose of this with chicken13kInfoFreeList(). */ struct chicken13kInfo *chicken13kInfoLoadByQuery(struct sqlConnection *conn, char *query); /* Load all chicken13kInfo from table that satisfy the query given. * Where query is of the form 'select * from example where something=something' * or 'select example.* from example, anotherTable where example.something = * anotherTable.something'. * Dispose of this with chicken13kInfoFreeList(). */ void chicken13kInfoSaveToDb(struct sqlConnection *conn, struct chicken13kInfo *el, char *tableName, int updateSize); /* Save chicken13kInfo as a row to the table specified by tableName. * As blob fields may be arbitrary size updateSize specifies the approx size * of a string that would contain the entire query. Arrays of native types are * converted to comma separated strings and loaded as such, User defined types are * inserted as NULL. Note that strings must be escaped to allow insertion into the database. * For example "autosql's features include" --> "autosql\'s features include" * If worried about this use chicken13kInfoSaveToDbEscaped() */ void chicken13kInfoSaveToDbEscaped(struct sqlConnection *conn, struct chicken13kInfo *el, char *tableName, int updateSize); /* Save chicken13kInfo as a row to the table specified by tableName. * As blob fields may be arbitrary size updateSize specifies the approx size. * of a string that would contain the entire query. Automatically * escapes all simple strings (not arrays of string) but may be slower than chicken13kInfoSaveToDb(). * For example automatically copies and converts: * "autosql's features include" --> "autosql\'s features include" * before inserting into database. */ struct chicken13kInfo *chicken13kInfoCommaIn(char **pS, struct chicken13kInfo *ret); /* Create a chicken13kInfo out of a comma separated string. * This will fill in ret if non-null, otherwise will * return a new chicken13kInfo */ void chicken13kInfoFree(struct chicken13kInfo **pEl); /* Free a single dynamically allocated chicken13kInfo such as created * with chicken13kInfoLoad(). */ void chicken13kInfoFreeList(struct chicken13kInfo **pList); /* Free a list of dynamically allocated chicken13kInfo's */ void chicken13kInfoOutput(struct chicken13kInfo *el, FILE *f, char sep, char lastSep); /* Print out chicken13kInfo. Separate fields with sep. Follow last field with lastSep. */ #define chicken13kInfoTabOut(el,f) chicken13kInfoOutput(el,f,'\t','\n'); /* Print out chicken13kInfo as a line in a tab-separated file. */ #define chicken13kInfoCommaOut(el,f) chicken13kInfoOutput(el,f,',',','); /* Print out chicken13kInfo as a comma separated list including final comma. */ /* -------------------------------- End autoSql Generated Code -------------------------------- */ #endif /* CHICKEN13KINFO_H */