/* cnpSebat2.h was originally generated by the autoSql program, which also * generated cnpSebat2.c and cnpSebat2.sql. This header links the database and * the RAM representation of objects. */ #ifndef CNPSEBAT2_H #define CNPSEBAT2_H #define CNPSEBAT2_NUM_COLS 5 struct cnpSebat2 /* CNP Data from the Sebat lab */ { struct cnpSebat2 *next; /* Next in singly linked list. */ char *chrom; /* Reference sequence chromosome or scaffold */ unsigned chromStart; /* Start position in chrom */ unsigned chromEnd; /* End position in chrom */ char *name; /* Gain or Loss */ unsigned probes; /* Number of probes */ }; void cnpSebat2StaticLoad(char **row, struct cnpSebat2 *ret); /* Load a row from cnpSebat2 table into ret. The contents of ret will * be replaced at the next call to this function. */ struct cnpSebat2 *cnpSebat2Load(char **row); /* Load a cnpSebat2 from row fetched with select * from cnpSebat2 * from database. Dispose of this with cnpSebat2Free(). */ struct cnpSebat2 *cnpSebat2LoadAll(char *fileName); /* Load all cnpSebat2 from whitespace-separated file. * Dispose of this with cnpSebat2FreeList(). */ struct cnpSebat2 *cnpSebat2LoadAllByChar(char *fileName, char chopper); /* Load all cnpSebat2 from chopper separated file. * Dispose of this with cnpSebat2FreeList(). */ #define cnpSebat2LoadAllByTab(a) cnpSebat2LoadAllByChar(a, '\t'); /* Load all cnpSebat2 from tab separated file. * Dispose of this with cnpSebat2FreeList(). */ struct cnpSebat2 *cnpSebat2CommaIn(char **pS, struct cnpSebat2 *ret); /* Create a cnpSebat2 out of a comma separated string. * This will fill in ret if non-null, otherwise will * return a new cnpSebat2 */ void cnpSebat2Free(struct cnpSebat2 **pEl); /* Free a single dynamically allocated cnpSebat2 such as created * with cnpSebat2Load(). */ void cnpSebat2FreeList(struct cnpSebat2 **pList); /* Free a list of dynamically allocated cnpSebat2's */ void cnpSebat2Output(struct cnpSebat2 *el, FILE *f, char sep, char lastSep); /* Print out cnpSebat2. Separate fields with sep. Follow last field with lastSep. */ #define cnpSebat2TabOut(el,f) cnpSebat2Output(el,f,'\t','\n'); /* Print out cnpSebat2 as a line in a tab-separated file. */ #define cnpSebat2CommaOut(el,f) cnpSebat2Output(el,f,',',','); /* Print out cnpSebat2 as a comma separated list including final comma. */ /* -------------------------------- End autoSql Generated Code -------------------------------- */ #endif /* CNPSEBAT2_H */