/* delConrad2.h was originally generated by the autoSql program, which also * generated delConrad2.c and delConrad2.sql. This header links the database and * the RAM representation of objects. */ #ifndef DELCONRAD2_H #define DELCONRAD2_H #define DELCONRAD2_NUM_COLS 12 struct delConrad2 /* Deletions from Conrad */ { struct delConrad2 *next; /* Next in singly linked list. */ char *chrom; /* Reference sequence chromosome or scaffold */ unsigned chromStart; /* Start position in chrom */ unsigned chromEnd; /* End position in chrom */ char *name; /* Name */ unsigned score; /* Always 1000 */ char strand[2]; /* Always positive */ unsigned thickStart; /* Max start (can be different from chromStart) */ unsigned thickEnd; /* Max end (can be different from chromEnd) */ unsigned count1; /* Count1 */ unsigned count2; /* Count2 */ char *offspring; /* HapMap identifier */ char *population; /* HapMap population */ }; void delConrad2StaticLoad(char **row, struct delConrad2 *ret); /* Load a row from delConrad2 table into ret. The contents of ret will * be replaced at the next call to this function. */ struct delConrad2 *delConrad2Load(char **row); /* Load a delConrad2 from row fetched with select * from delConrad2 * from database. Dispose of this with delConrad2Free(). */ struct delConrad2 *delConrad2LoadAll(char *fileName); /* Load all delConrad2 from whitespace-separated file. * Dispose of this with delConrad2FreeList(). */ struct delConrad2 *delConrad2LoadAllByChar(char *fileName, char chopper); /* Load all delConrad2 from chopper separated file. * Dispose of this with delConrad2FreeList(). */ #define delConrad2LoadAllByTab(a) delConrad2LoadAllByChar(a, '\t'); /* Load all delConrad2 from tab separated file. * Dispose of this with delConrad2FreeList(). */ struct delConrad2 *delConrad2CommaIn(char **pS, struct delConrad2 *ret); /* Create a delConrad2 out of a comma separated string. * This will fill in ret if non-null, otherwise will * return a new delConrad2 */ void delConrad2Free(struct delConrad2 **pEl); /* Free a single dynamically allocated delConrad2 such as created * with delConrad2Load(). */ void delConrad2FreeList(struct delConrad2 **pList); /* Free a list of dynamically allocated delConrad2's */ void delConrad2Output(struct delConrad2 *el, FILE *f, char sep, char lastSep); /* Print out delConrad2. Separate fields with sep. Follow last field with lastSep. */ #define delConrad2TabOut(el,f) delConrad2Output(el,f,'\t','\n'); /* Print out delConrad2 as a line in a tab-separated file. */ #define delConrad2CommaOut(el,f) delConrad2Output(el,f,',',','); /* Print out delConrad2 as a comma separated list including final comma. */ /* -------------------------------- End autoSql Generated Code -------------------------------- */ #endif /* DELCONRAD2_H */