/* hubConnect - stuff to manage connections to track hubs. Most of this is mediated through * the hubStatus table in the hgcentral database. Here there are routines to translate between * hub symbolic names and hub URLs, to see if a hub is up or down or sideways (up but badly * formatted) etc. Note that there is no C structure corresponding to a row in the hubStatus * table by design. We just want field-by-field access to this. */ #ifndef HUBCONNECT_H #define HUBCONNECT_H #define defaultHubPublicTableName "hubPublic" /* Name of our table with list of public hubs. read only */ #define hubPublicTableConfVariable "hub.publicTableName" /* the name of the hg.conf variable to use something other than the default */ #define defaultHubStatusTableName "hubStatus" /* Name of table that maintains status of hubs read/write. */ #define hubStatusTableConfVariable "hub.statusTableName" /* the name of the hg.conf variable to use something other than the default */ #define hgHubConnectTimeToCheck "hub.timeToCheck" /* the number of seconds to wait before checking the hub again */ #define hgHubDataText "hubUrl" /* name of cgi variable containing new hub name */ #define hubTrackPrefix "hub_" /* The names of all hub tracks begin with this. Use in cart. */ boolean isHubTrack(char *trackName); /* Return TRUE if it's a hub track. */ struct hubConnectStatus /* Basic status in hubStatus. Note it is *not* the same as the * hubStatus table, that has a bunch of extra fields to help * keep track of whether the hub is alive. */ { struct hubConnectStatus *next; unsigned id; /* Hub ID */ char *hubUrl; /* URL to hub.ra file. */ char *errorMessage; /* If non-empty hub has an error and this describes it. */ struct trackHub *trackHub; /* pointer to structure that describes hub */ unsigned status; /* 1 if private */ }; void hubConnectStatusFree(struct hubConnectStatus **pHub); /* Free hubConnectStatus */ void hubConnectStatusFreeList(struct hubConnectStatus **pList); /* Free a list of dynamically allocated hubConnectStatus's */ struct hubConnectStatus *hubConnectStatusForId( struct sqlConnection *conn, int id); /* Given a hub ID return associated status. */ struct hubConnectStatus *hubConnectStatusListFromCart(struct cart *cart); /* Return list of track hubs that are turned on by user in cart. */ struct hubConnectStatus *hubConnectStatusListFromCartAll(struct cart *cart); /* Return list of all track hubs that are referenced by cart. */ #define hubConnectTrackHubsVarName "trackHubs" /* Name of cart variable with list of track hubs. */ #define hgHubConnectCgiDestUrl "hgHubConnect.destUrl" /* Cart variable to tell hgHubConnect where to go on submit. */ #define hgHubConnectRemakeTrackHub "hgHubConnect.remakeTrackHub" /* Cart variable to indicate trackHub cart variable needs refreshing. */ #define hgHubConnectHubVarPrefix "hgHubConnect.hub." /* Prefix to temporary variable holding selected cart names. */ boolean hubConnectTableExists(); /* Return TRUE if the hubConnect table exists. */ struct slName *hubConnectHubsInCart(struct cart *cart); /* Return list of track hub ids that are turned on by user. */ int hubIdFromCartName(char *trackName); /* Given something like "hgHubConnect.hub.123" return 123 */ unsigned hubIdFromTrackName(char *trackName); /* Given something like "hub_123_myWig" return 123 */ void hubConnectAddDescription(char *database, struct trackDb *tdb); /* Fetch tdb->track's html description (or nearest ancestor's non-empty description) * and store in tdb->html. */ struct trackDb *hubConnectAddHubForTrackAndFindTdb( char *database, char *trackName, struct trackDb **pTdbList, struct hash *trackHash); /* Go find hub for trackName (which will begin with hub_), and load the tracks * for it, appending to end of list and adding to trackHash. Return the * trackDb associated with trackName. */ char *hubFileVar(); /* return the name of the cart variable that holds the name of the * file in trash that has private hubs */ boolean hubWriteToFile(FILE *f, struct hubConnectStatus *el); /* write out a hubConnectStatus structure to a file */ unsigned hubFindOrAddUrlInStatusTable(char *database, struct cart *cart, char *url, char **errorMessage); /* find or add a URL to the status table */ unsigned hubResetError(char *url); /* clear the error for this url in the hubStatus table,return the id */ unsigned hubClearStatus(char *url); /* drop the information about this url from the hubStatus table,return the id */ void hubDisconnect(struct cart *cart, char *url); /* drop the information about this url from the hubStatus table, and * the cart variable the references this hub */ void hubCheckForNew( struct cart *cart); /* see if the user just typed in a new hub url, add to cart and hubStatus */ struct trackHub *trackHubFromId(unsigned hubId); /* Given a hub ID number, return corresponding trackHub structure. * ErrAbort if there's a problem. */ void hubUpdateStatus(char *errorMessage, struct hubConnectStatus *hub); /* set the error message in the hubStatus table */ boolean trackHubHasDatabase(struct trackHub *hub, char *database) ; /* Return TRUE if hub has contents for database */ struct trackDb *hubAddTracks(struct hubConnectStatus *hub, char *database, struct trackHub **pHubList); /* Load up stuff from data hub and append to list. The hubUrl points to * a trackDb.ra format file. */ struct hubConnectStatus *hubConnectLoadHubs(struct cart *cart); /* load the track data hubs. Set a static global to remember them */ struct hubConnectStatus *hubConnectGetHubs(); /* return the static global to the track data hubs */ #endif /* HUBCONNECT_H */