/* taxonDivision.h was originally generated by the autoSql program, which also * generated taxonDivision.c and taxonDivision.sql. This header links the database and * the RAM representation of objects. */ #ifndef TAXONDIVISION_H #define TAXONDIVISION_H #ifndef JKSQL_H #include "jksql.h" #endif #define TAXONDIVISION_NUM_COLS 4 struct taxonDivision /* ncbi taxonomy high level divisions */ { struct taxonDivision *next; /* Next in singly linked list. */ unsigned id; /* division id in GenBank taxonomy database */ char code[4]; /* division code 3 characters */ char *name; /* division name e.g. BCT, PLN, VRT, MAM, PRI... */ char *comments; /* free-text comments */ }; void taxonDivisionStaticLoad(char **row, struct taxonDivision *ret); /* Load a row from taxonDivision table into ret. The contents of ret will * be replaced at the next call to this function. */ struct taxonDivision *taxonDivisionLoad(char **row); /* Load a taxonDivision from row fetched with select * from taxonDivision * from database. Dispose of this with taxonDivisionFree(). */ struct taxonDivision *taxonDivisionLoadAll(char *fileName); /* Load all taxonDivision from whitespace-separated file. * Dispose of this with taxonDivisionFreeList(). */ struct taxonDivision *taxonDivisionLoadAllByChar(char *fileName, char chopper); /* Load all taxonDivision from chopper separated file. * Dispose of this with taxonDivisionFreeList(). */ #define taxonDivisionLoadAllByTab(a) taxonDivisionLoadAllByChar(a, '\t'); /* Load all taxonDivision from tab separated file. * Dispose of this with taxonDivisionFreeList(). */ struct taxonDivision *taxonDivisionLoadByQuery(struct sqlConnection *conn, char *query); /* Load all taxonDivision from table that satisfy the query given. * Where query is of the form 'select * from example where something=something' * or 'select example.* from example, anotherTable where example.something = * anotherTable.something'. * Dispose of this with taxonDivisionFreeList(). */ void taxonDivisionSaveToDb(struct sqlConnection *conn, struct taxonDivision *el, char *tableName, int updateSize); /* Save taxonDivision as a row to the table specified by tableName. * As blob fields may be arbitrary size updateSize specifies the approx size * of a string that would contain the entire query. Arrays of native types are * converted to comma separated strings and loaded as such, User defined types are * inserted as NULL. Note that strings must be escaped to allow insertion into the database. * For example "autosql's features include" --> "autosql\'s features include" * If worried about this use taxonDivisionSaveToDbEscaped() */ void taxonDivisionSaveToDbEscaped(struct sqlConnection *conn, struct taxonDivision *el, char *tableName, int updateSize); /* Save taxonDivision as a row to the table specified by tableName. * As blob fields may be arbitrary size updateSize specifies the approx size. * of a string that would contain the entire query. Automatically * escapes all simple strings (not arrays of string) but may be slower than taxonDivisionSaveToDb(). * For example automatically copies and converts: * "autosql's features include" --> "autosql\'s features include" * before inserting into database. */ struct taxonDivision *taxonDivisionCommaIn(char **pS, struct taxonDivision *ret); /* Create a taxonDivision out of a comma separated string. * This will fill in ret if non-null, otherwise will * return a new taxonDivision */ void taxonDivisionFree(struct taxonDivision **pEl); /* Free a single dynamically allocated taxonDivision such as created * with taxonDivisionLoad(). */ void taxonDivisionFreeList(struct taxonDivision **pList); /* Free a list of dynamically allocated taxonDivision's */ void taxonDivisionOutput(struct taxonDivision *el, FILE *f, char sep, char lastSep); /* Print out taxonDivision. Separate fields with sep. Follow last field with lastSep. */ #define taxonDivisionTabOut(el,f) taxonDivisionOutput(el,f,'\t','\n'); /* Print out taxonDivision as a line in a tab-separated file. */ #define taxonDivisionCommaOut(el,f) taxonDivisionOutput(el,f,',',','); /* Print out taxonDivision as a comma separated list including final comma. */ /* -------------------------------- End autoSql Generated Code -------------------------------- */ #endif /* TAXONDIVISION_H */