/* trackVersion.h was originally generated by the autoSql program, which also * generated trackVersion.c and trackVersion.sql. This header links the database and * the RAM representation of objects. */ #ifndef TRACKVERSION_H #define TRACKVERSION_H #ifndef JKSQL_H #include "jksql.h" #endif #define TRACKVERSION_NUM_COLS 9 struct trackVersion /* version information for database tables to monitor data loading history */ { struct trackVersion *next; /* Next in singly linked list. */ int ix; /* auto-increment ID */ char *db; /* UCSC database name */ char *name; /* table name in database */ char *who; /* Unix userID that performed this update */ char *version; /* version string, whatever is meaningful for data source */ char *updateTime; /* YYYY-MM-DD HH:MM:SS most-recent-update time */ char *comment; /* other comments about version */ char *source; /* perhaps a URL for the data source */ char *dateReference; /* Ensembl date string for archive reference */ }; void trackVersionStaticLoad(char **row, struct trackVersion *ret); /* Load a row from trackVersion table into ret. The contents of ret will * be replaced at the next call to this function. */ struct trackVersion *trackVersionLoad(char **row); /* Load a trackVersion from row fetched with select * from trackVersion * from database. Dispose of this with trackVersionFree(). */ struct trackVersion *trackVersionLoadAll(char *fileName); /* Load all trackVersion from whitespace-separated file. * Dispose of this with trackVersionFreeList(). */ struct trackVersion *trackVersionLoadAllByChar(char *fileName, char chopper); /* Load all trackVersion from chopper separated file. * Dispose of this with trackVersionFreeList(). */ #define trackVersionLoadAllByTab(a) trackVersionLoadAllByChar(a, '\t'); /* Load all trackVersion from tab separated file. * Dispose of this with trackVersionFreeList(). */ struct trackVersion *trackVersionLoadByQuery(struct sqlConnection *conn, char *query); /* Load all trackVersion from table that satisfy the query given. * Where query is of the form 'select * from example where something=something' * or 'select example.* from example, anotherTable where example.something = * anotherTable.something'. * Dispose of this with trackVersionFreeList(). */ void trackVersionSaveToDb(struct sqlConnection *conn, struct trackVersion *el, char *tableName, int updateSize); /* Save trackVersion as a row to the table specified by tableName. * As blob fields may be arbitrary size updateSize specifies the approx size * of a string that would contain the entire query. Arrays of native types are * converted to comma separated strings and loaded as such, User defined types are * inserted as NULL. Note that strings must be escaped to allow insertion into the database. * For example "autosql's features include" --> "autosql\'s features include" * If worried about this use trackVersionSaveToDbEscaped() */ void trackVersionSaveToDbEscaped(struct sqlConnection *conn, struct trackVersion *el, char *tableName, int updateSize); /* Save trackVersion as a row to the table specified by tableName. * As blob fields may be arbitrary size updateSize specifies the approx size. * of a string that would contain the entire query. Automatically * escapes all simple strings (not arrays of string) but may be slower than trackVersionSaveToDb(). * For example automatically copies and converts: * "autosql's features include" --> "autosql\'s features include" * before inserting into database. */ struct trackVersion *trackVersionCommaIn(char **pS, struct trackVersion *ret); /* Create a trackVersion out of a comma separated string. * This will fill in ret if non-null, otherwise will * return a new trackVersion */ void trackVersionFree(struct trackVersion **pEl); /* Free a single dynamically allocated trackVersion such as created * with trackVersionLoad(). */ void trackVersionFreeList(struct trackVersion **pList); /* Free a list of dynamically allocated trackVersion's */ void trackVersionOutput(struct trackVersion *el, FILE *f, char sep, char lastSep); /* Print out trackVersion. Separate fields with sep. Follow last field with lastSep. */ #define trackVersionTabOut(el,f) trackVersionOutput(el,f,'\t','\n'); /* Print out trackVersion as a line in a tab-separated file. */ #define trackVersionCommaOut(el,f) trackVersionOutput(el,f,',',','); /* Print out trackVersion as a comma separated list including final comma. */ /* -------------------------------- End autoSql Generated Code -------------------------------- */ struct trackVersion *getTrackVersion(char *database, char *track); // Get most recent trackVersion for given track in given database #endif /* TRACKVERSION_H */