# generated with encodeMkChangeNotes 0.9 This is a release1 of the "ENCODE wgEncodeHudsonalphaRnaSeq" The composite track is wgEncodeHudsonalphaRnaSeq Categories of tables and files('): A) Untouched - are on public browser and should remain B) Deprecated - are currently on RR but will no longer be needed and should not be referenced by the public site. NOTE: NO FILES SHOULD BE REMOVED from the downloads directory on hgdownloads (RR). This list is provided for completeness. Any files marked here as in gbdb may be eliminated. C) New - are only currently on test but will need to be pushed to the RR. D) Additional items of note Summary total counts for release1 (new+untouched): Tables: 12 Files: 15 Gbdbs: 6 A) Untouched Tables (0): A') Untouched Files (0 downloadables, 0 gbdbs): B) Deprecated tables (0): B') Deprecated files (0 downloadables, 0 gbdbs): C) New tables (12): wgEncodeHudsonalphaRnaSeqAlignsRep1A549CellPapErng3R1x36Dexa wgEncodeHudsonalphaRnaSeqAlignsRep1A549CellPapErng3R1x36Etoh02 wgEncodeHudsonalphaRnaSeqAlignsRep1JurkatCellPapBow10R1x25 wgEncodeHudsonalphaRnaSeqAlignsRep2A549CellPapErng3R1x36Dexa wgEncodeHudsonalphaRnaSeqAlignsRep2A549CellPapErng3R1x36Etoh02 wgEncodeHudsonalphaRnaSeqAlignsRep2JurkatCellPapBow10R1x25 wgEncodeHudsonalphaRnaSeqRPKMRep1A549CellPapErng3R1x36Dexa wgEncodeHudsonalphaRnaSeqRPKMRep1A549CellPapErng3R1x36Etoh02 wgEncodeHudsonalphaRnaSeqRPKMRep1JurkatCellPapBow10R1x25 wgEncodeHudsonalphaRnaSeqRPKMRep2A549CellPapErng3R1x36Dexa wgEncodeHudsonalphaRnaSeqRPKMRep2A549CellPapErng3R1x36Etoh02 wgEncodeHudsonalphaRnaSeqRPKMRep2JurkatCellPapBow10R1x25 C') New files (12 downloadables, 6 gbdbs): current location on alpha: /usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeHudsonalphaRnaSeq/release1/ NOT on RR but must be placed in: /usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeHudsonalphaRnaSeq/ /usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeHudsonalphaRnaSeq/release1/wgEncodeHudsonalphaRnaSeqAlignsRep1A549CellPapErng3R1x36Dexa.tagAlign.gz /usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeHudsonalphaRnaSeq/release1/wgEncodeHudsonalphaRnaSeqAlignsRep1A549CellPapErng3R1x36Etoh02.tagAlign.gz /usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeHudsonalphaRnaSeq/release1/wgEncodeHudsonalphaRnaSeqAlignsRep1JurkatCellPapBow10R1x25.tagAlign.gz /usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeHudsonalphaRnaSeq/release1/wgEncodeHudsonalphaRnaSeqAlignsRep2A549CellPapErng3R1x36Dexa.tagAlign.gz /usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeHudsonalphaRnaSeq/release1/wgEncodeHudsonalphaRnaSeqAlignsRep2A549CellPapErng3R1x36Etoh02.tagAlign.gz /usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeHudsonalphaRnaSeq/release1/wgEncodeHudsonalphaRnaSeqAlignsRep2JurkatCellPapBow10R1x25.tagAlign.gz /usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeHudsonalphaRnaSeq/release1/wgEncodeHudsonalphaRnaSeqRPKMRep1A549CellPapErng3R1x36Dexa.bed12.gz /usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeHudsonalphaRnaSeq/release1/wgEncodeHudsonalphaRnaSeqRPKMRep1A549CellPapErng3R1x36Etoh02.bed12.gz /usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeHudsonalphaRnaSeq/release1/wgEncodeHudsonalphaRnaSeqRPKMRep1JurkatCellPapBow10R1x25.bed12.gz /usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeHudsonalphaRnaSeq/release1/wgEncodeHudsonalphaRnaSeqRPKMRep2A549CellPapErng3R1x36Dexa.bed12.gz /usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeHudsonalphaRnaSeq/release1/wgEncodeHudsonalphaRnaSeqRPKMRep2A549CellPapErng3R1x36Etoh02.bed12.gz /usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeHudsonalphaRnaSeq/release1/wgEncodeHudsonalphaRnaSeqRPKMRep2JurkatCellPapBow10R1x25.bed12.gz /gbdb/hg18/bbi/wgEncodeHudsonalphaRnaSeqAlignsRep1A549CellPapErng3R1x36Dexa.bb /gbdb/hg18/bbi/wgEncodeHudsonalphaRnaSeqAlignsRep1A549CellPapErng3R1x36Etoh02.bb /gbdb/hg18/bbi/wgEncodeHudsonalphaRnaSeqAlignsRep1JurkatCellPapBow10R1x25.bb /gbdb/hg18/bbi/wgEncodeHudsonalphaRnaSeqAlignsRep2A549CellPapErng3R1x36Dexa.bb /gbdb/hg18/bbi/wgEncodeHudsonalphaRnaSeqAlignsRep2A549CellPapErng3R1x36Etoh02.bb /gbdb/hg18/bbi/wgEncodeHudsonalphaRnaSeqAlignsRep2JurkatCellPapBow10R1x25.bb D) Additional items: current location on alpha: /usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeHudsonalphaRnaSeq/release1/ should be placed on the RR in (overwritting any existing copy): /usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeHudsonalphaRnaSeq/ /usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeHudsonalphaRnaSeq/release1/index.html /usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeHudsonalphaRnaSeq/release1/files.txt /usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeHudsonalphaRnaSeq/release1/md5sum.txt