# generated with encodeMkChangeNotes 0.9 This is a release1 of the "ENCODE wgEncodeSydhNsome" The composite track is wgEncodeSydhNsome # WARNINGS ################################################# 1 - could not find gbdb path in table hg19.wgEncodeSydhNsomeK562AlnRep2 2 - table wgEncodeSydhNsomeK562AlnRep2 does not exist, from filetype bam 3 - could not find gbdb path in table hg19.wgEncodeSydhNsomeGm12878AlnRep3 4 - table wgEncodeSydhNsomeGm12878AlnRep3 does not exist, from filetype bam 5 - could not find gbdb path in table hg19.wgEncodeSydhNsomeK562AlnRep10 6 - table wgEncodeSydhNsomeK562AlnRep10 does not exist, from filetype bam 7 - could not find gbdb path in table hg19.wgEncodeSydhNsomeGm12878AlnRep8 8 - table wgEncodeSydhNsomeGm12878AlnRep8 does not exist, from filetype bam 9 - could not find gbdb path in table hg19.wgEncodeSydhNsomeGm12878AlnRep7 10 - table wgEncodeSydhNsomeGm12878AlnRep7 does not exist, from filetype bam 11 - could not find gbdb path in table hg19.wgEncodeSydhNsomeGm12878AlnRep2 12 - table wgEncodeSydhNsomeGm12878AlnRep2 does not exist, from filetype bam 13 - could not find gbdb path in table hg19.wgEncodeSydhNsomeGm12878AlnRep1 14 - table wgEncodeSydhNsomeGm12878AlnRep1 does not exist, from filetype bam 15 - could not find gbdb path in table hg19.wgEncodeSydhNsomeGm12878AlnRep5 16 - table wgEncodeSydhNsomeGm12878AlnRep5 does not exist, from filetype bam 17 - could not find gbdb path in table hg19.wgEncodeSydhNsomeK562AlnRep7 18 - table wgEncodeSydhNsomeK562AlnRep7 does not exist, from filetype bam 19 - could not find gbdb path in table hg19.wgEncodeSydhNsomeK562AlnRep1 20 - table wgEncodeSydhNsomeK562AlnRep1 does not exist, from filetype bam 21 - could not find gbdb path in table hg19.wgEncodeSydhNsomeGm12878AlnRep6 22 - table wgEncodeSydhNsomeGm12878AlnRep6 does not exist, from filetype bam 23 - could not find gbdb path in table hg19.wgEncodeSydhNsomeGm12878AlnRep4 24 - table wgEncodeSydhNsomeGm12878AlnRep4 does not exist, from filetype bam 25 - could not find gbdb path in table hg19.wgEncodeSydhNsomeGm12878AlnRep9 26 - table wgEncodeSydhNsomeGm12878AlnRep9 does not exist, from filetype bam 27 - could not find gbdb path in table hg19.wgEncodeSydhNsomeK562AlnRep4 28 - table wgEncodeSydhNsomeK562AlnRep4 does not exist, from filetype bam 29 - could not find gbdb path in table hg19.wgEncodeSydhNsomeK562AlnRep11 30 - table wgEncodeSydhNsomeK562AlnRep11 does not exist, from filetype bam 31 - could not find gbdb path in table hg19.wgEncodeSydhNsomeK562AlnRep8 32 - table wgEncodeSydhNsomeK562AlnRep8 does not exist, from filetype bam 33 - could not find gbdb path in table hg19.wgEncodeSydhNsomeK562AlnRep5 34 - table wgEncodeSydhNsomeK562AlnRep5 does not exist, from filetype bam 35 - could not find gbdb path in table hg19.wgEncodeSydhNsomeK562AlnRep3 36 - table wgEncodeSydhNsomeK562AlnRep3 does not exist, from filetype bam 37 - could not find gbdb path in table hg19.wgEncodeSydhNsomeK562AlnRep6 38 - table wgEncodeSydhNsomeK562AlnRep6 does not exist, from filetype bam 39 - could not find gbdb path in table hg19.wgEncodeSydhNsomeK562AlnRep9 40 - table wgEncodeSydhNsomeK562AlnRep9 does not exist, from filetype bam 41 - addition file md5sum.txt not found ############################################################ Categories of tables and files('): A) Untouched - are on public browser and should remain B) Deprecated - are currently on RR but will no longer be needed and should not be referenced by the public site. NOTE: NO FILES SHOULD BE REMOVED from the downloads directory on hgdownloads (RR). This list is provided for completeness. Any files marked here as in gbdb may be eliminated. C) New - are only currently on test but will need to be pushed to the RR. D) Additional items of note Summary total counts for release1 (new+untouched): Tables: 2 Files: 84 Gbdbs: 2 A) Untouched Tables (0): A') Untouched Files (0 downloadables, 0 gbdbs): B) Deprecated tables (0): B') Deprecated files (0 downloadables, 0 gbdbs): C) New tables (2): wgEncodeSydhNsomeGm12878Sig wgEncodeSydhNsomeK562Sig C') New files (82 downloadables, 2 gbdbs): current location on alpha: /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/ NOT on RR but must be placed in: /usr/local/apache/htdocs/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/ /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878AlnRep1.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878AlnRep1.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878AlnRep2.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878AlnRep2.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878AlnRep3.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878AlnRep3.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878AlnRep4.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878AlnRep4.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878AlnRep5.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878AlnRep5.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878AlnRep6.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878AlnRep6.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878AlnRep7.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878AlnRep7.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878AlnRep8.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878AlnRep8.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878AlnRep9.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878AlnRep9.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878RawData2Rep1.csqual.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878RawData2Rep2.csqual.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878RawData2Rep3.csqual.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878RawData2Rep4.csqual.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878RawData2Rep5.csqual.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878RawData2Rep6.csqual.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878RawData2Rep7.csqual.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878RawData2Rep8.csqual.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878RawData2Rep9.csqual.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878RawDataRep1.csfasta.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878RawDataRep2.csfasta.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878RawDataRep3.csfasta.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878RawDataRep4.csfasta.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878RawDataRep5.csfasta.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878RawDataRep6.csfasta.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878RawDataRep7.csfasta.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878RawDataRep8.csfasta.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878RawDataRep9.csfasta.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeGm12878Sig.bigWig /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562AlnRep1.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562AlnRep1.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562AlnRep10.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562AlnRep10.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562AlnRep11.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562AlnRep11.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562AlnRep2.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562AlnRep2.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562AlnRep3.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562AlnRep3.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562AlnRep4.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562AlnRep4.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562AlnRep5.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562AlnRep5.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562AlnRep6.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562AlnRep6.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562AlnRep7.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562AlnRep7.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562AlnRep8.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562AlnRep8.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562AlnRep9.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562AlnRep9.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562RawData2Rep1.csqual.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562RawData2Rep10.csqual.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562RawData2Rep11.csqual.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562RawData2Rep2.csqual.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562RawData2Rep3.csqual.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562RawData2Rep4.csqual.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562RawData2Rep5.csqual.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562RawData2Rep6.csqual.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562RawData2Rep7.csqual.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562RawData2Rep8.csqual.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562RawData2Rep9.csqual.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562RawDataRep1.csfasta.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562RawDataRep10.csfasta.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562RawDataRep11.csfasta.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562RawDataRep2.csfasta.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562RawDataRep3.csfasta.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562RawDataRep4.csfasta.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562RawDataRep5.csfasta.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562RawDataRep6.csfasta.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562RawDataRep7.csfasta.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562RawDataRep8.csfasta.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562RawDataRep9.csfasta.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/wgEncodeSydhNsomeK562Sig.bigWig /gbdb/hg19/bbi/wgEncodeSydhNsomeGm12878Sig.bigWig /gbdb/hg19/bbi/wgEncodeSydhNsomeK562Sig.bigWig D) Additional items: current location on alpha: /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/ should be placed on the RR in (overwritting any existing copy): /usr/local/apache/htdocs/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/ /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/index.html /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/md5sum.txt /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeSydhNsome/release1/files.txt