# generated with encodeMkChangeNotes 0.9 This is a release1 of the "ENCODE wgEncodeUchicagoTfbs" The composite track is wgEncodeUchicagoTfbs # WARNINGS ################################################# ############################################################ Categories of tables and files('): A) Untouched - are on public browser and should remain B) Deprecated - are currently on RR but will no longer be needed and should not be referenced by the public site. NOTE: NO FILES SHOULD BE REMOVED from the downloads directory on hgdownloads (RR). This list is provided for completeness. Any files marked here as in gbdb may be eliminated. C) New - are only currently on test but will need to be pushed to the RR. D) Additional items of note Summary total counts for release1 (new+untouched): Tables: 12 Files: 99 Gbdbs: 6 A) Untouched Tables (0): A') Untouched Files (0 downloadables, 0 gbdbs): B) Deprecated tables (0): B') Deprecated files (0 downloadables, 0 gbdbs): C) New tables (12): wgEncodeUchicagoTfbsK562EfosControlPk wgEncodeUchicagoTfbsK562EfosControlSig wgEncodeUchicagoTfbsK562Egata2ControlPk wgEncodeUchicagoTfbsK562Egata2ControlSig wgEncodeUchicagoTfbsK562Ehdac8ControlPk wgEncodeUchicagoTfbsK562Ehdac8ControlSig wgEncodeUchicagoTfbsK562EjunbControlPk wgEncodeUchicagoTfbsK562EjunbControlSig wgEncodeUchicagoTfbsK562EjundControlPk wgEncodeUchicagoTfbsK562EjundControlSig wgEncodeUchicagoTfbsK562Enr4a1ControlPk wgEncodeUchicagoTfbsK562Enr4a1ControlSig C') New files (96 downloadables, 6 gbdbs): current location on alpha: /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/ NOT on RR but must be placed in: /usr/local/apache/htdocs/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/ /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EfosControlAlnRep1.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EfosControlAlnRep1.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EfosControlPk.narrowPeak.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EfosControlRawDataRep1.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EfosControlSig.bigWig /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EfosControlfosAlnRep2.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EfosControlfosAlnRep2.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EfosControlfosAlnRep3.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EfosControlfosAlnRep3.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EfosControlfosRawDataRep2.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EfosControlfosRawDataRep3.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562Egata2ControlAlnRep1.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562Egata2ControlAlnRep1.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562Egata2ControlPk.narrowPeak.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562Egata2ControlRawDataRep1.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562Egata2ControlSig.bigWig /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562Egata2Controlgata2AlnRep2.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562Egata2Controlgata2AlnRep2.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562Egata2Controlgata2RawDataRep2.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562Ehdac8ControlAlnRep1.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562Ehdac8ControlAlnRep1.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562Ehdac8ControlPk.narrowPeak.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562Ehdac8ControlRawDataRep1.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562Ehdac8ControlSig.bigWig /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562Ehdac8Controlhdac8AlnRep2.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562Ehdac8Controlhdac8AlnRep2.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562Ehdac8Controlhdac8RawDataRep2.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EjunbControlAlnRep1.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EjunbControlAlnRep1.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EjunbControlPk.narrowPeak.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EjunbControlRawDataRep1.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EjunbControlSig.bigWig /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EjunbControljunbAlnRep2.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EjunbControljunbAlnRep2.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EjunbControljunbRawDataRep2.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EjundControlAlnRep1.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EjundControlAlnRep1.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EjundControlPk.narrowPeak.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EjundControlRawDataRep1.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EjundControlSig.bigWig /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EjundControljundAlnRep2.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EjundControljundAlnRep2.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EjundControljundAlnRep3.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EjundControljundAlnRep3.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EjundControljundRawDataRep2.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562EjundControljundRawDataRep3.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562Enr4a1ControlAlnRep1.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562Enr4a1ControlAlnRep1.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562Enr4a1ControlPk.narrowPeak.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562Enr4a1ControlRawDataRep1.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562Enr4a1ControlSig.bigWig /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562Enr4a1Controlnr4a1AlnRep2.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562Enr4a1Controlnr4a1AlnRep2.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562Enr4a1Controlnr4a1RawDataRep2.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlfosAlnRep1.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlfosAlnRep1.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlfosAlnRep2.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlfosAlnRep2.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlfosAlnRep3.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlfosAlnRep3.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlfosRawDataRep1.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlfosRawDataRep2.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlfosRawDataRep3.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlgata2AlnRep1.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlgata2AlnRep1.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlgata2AlnRep2.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlgata2AlnRep2.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlgata2RawDataRep1.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlgata2RawDataRep2.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlhdac8AlnRep1.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlhdac8AlnRep1.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlhdac8AlnRep2.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlhdac8AlnRep2.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlhdac8RawDataRep1.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlhdac8RawDataRep2.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControljunbAlnRep1.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControljunbAlnRep1.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControljunbAlnRep2.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControljunbAlnRep2.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControljunbRawDataRep1.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControljunbRawDataRep2.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControljundAlnRep1.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControljundAlnRep1.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControljundAlnRep2.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControljundAlnRep2.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControljundAlnRep3.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControljundAlnRep3.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControljundRawDataRep1.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControljundRawDataRep2.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControljundRawDataRep3.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlnr4a1AlnRep1.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlnr4a1AlnRep1.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlnr4a1AlnRep2.bam /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlnr4a1AlnRep2.bam.bai /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlnr4a1RawDataRep1.fastq.gz /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/wgEncodeUchicagoTfbsK562InputControlnr4a1RawDataRep2.fastq.gz /gbdb/hg19/bbi/wgEncodeUchicagoTfbsK562EfosControlSig.bigWig /gbdb/hg19/bbi/wgEncodeUchicagoTfbsK562Egata2ControlSig.bigWig /gbdb/hg19/bbi/wgEncodeUchicagoTfbsK562Ehdac8ControlSig.bigWig /gbdb/hg19/bbi/wgEncodeUchicagoTfbsK562EjunbControlSig.bigWig /gbdb/hg19/bbi/wgEncodeUchicagoTfbsK562EjundControlSig.bigWig /gbdb/hg19/bbi/wgEncodeUchicagoTfbsK562Enr4a1ControlSig.bigWig D) Additional items: current location on alpha: /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/ should be placed on the RR in (overwritting any existing copy): /usr/local/apache/htdocs/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/ /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/index.html /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/files.txt /usr/local/apache/htdocs-hgdownload/goldenPath/hg19/encodeDCC/wgEncodeUchicagoTfbs/release1/md5sum.txt