commit 7f1b060dac55a1fb1a2d6415e796588b159902f8 Author: Melissa Cline Date: Mon Oct 11 14:46:34 2010 -0700 actually added SH-SY5Y this time... commit 1925b9ff7cf33a04666a8710f5cc54a9b6156890 Author: Venkat Malladi Date: Fri Oct 8 16:49:22 2010 -0700 Added Cell line SK-SY5Y and protocol commit 320e2ba26c9a40ae153b3221e878dce949ad9721 Author: Tim Dreszer Date: Thu Oct 7 12:43:05 2010 -0700 Added labels to labs for cleaner findTracks display. Labs still need cleanup in mdb and cv.ra commit ac293ab737a12c2af5d30b3bcf9c7cf6bd71f601 Author: Kate Rosenbloom Date: Tue Oct 5 16:07:54 2010 -0700 Adding tags to grant entries commit fc7258ff43d9f44a3bce3eeaf4cc35f0121d847f Author: Venkat Malladi Date: Fri Oct 1 15:27:41 2010 -0700 Updated RnaExtract to be short total from short. Providing more information about meta-data. Also deleted reference to parentTables that have no function commit 52894c5188eec45348476d15a614e67305049e10 Merge: a2caf65 08cb881 Author: Cricket Sloan Date: Thu Sep 30 13:57:14 2010 -0700 Merge branch 'master' of cricket@hgwdev.cse.ucsc.edu:/data/git/kent commit a2caf652606c290932e9c2508d55cd11bb185a71 Author: Cricket Sloan Date: Thu Sep 30 13:57:09 2010 -0700 added AMA50ug commit f43bdcb2527752eab6732cb86d77c79faac8feff Author: Venkat Malladi Date: Wed Sep 29 16:59:14 2010 -0700 Added comment to descirbe the B10.H-2aH-4bp/Wts is associated with the CH12 cell line commit 416af9251a0996e7c9426d3bb3ae721b04f1b376 Author: Venkat Malladi Date: Wed Sep 29 10:55:45 2010 -0700 Updated Mouse Strain and Age metadata for CH12 and MEL cell lines commit 16c3f9fcba189df5a6cc783b44c18303bc4ab4dd Author: Venkat Malladi Date: Mon Sep 27 10:02:54 2010 -0700 Registerd antibody for Hardison Lab PAX5-N15 commit a1011c54ba86a1a344b3953a6db3e6681a005ba1 Author: Venkat Malladi Date: Mon Sep 27 09:42:56 2010 -0700 Antibody registration of 2 antibodies, CTCF_(C-20), p300(N-15). commit 4ef394296ec63c6eae38b9bc6063161ed0347ba5 Author: Venkat Malladi Date: Mon Sep 27 09:22:05 2010 -0700 Added how PBDE cells were obtained. commit 6eb63cfcbe2f118f717eda690d632d6bd6e32f28 Author: Cricket Sloan Date: Fri Sep 24 11:56:17 2010 -0700 Fixed broken links in antibody validation for Melissa commit da42d10adafb6c3a7edadbef33409b07361e5752 Author: Venkat Malladi Date: Thu Sep 23 10:17:23 2010 -0700 Finished registration of PBDE cell commit 8e18989ef7a65e766e9ce543be331ab8eae6651f Author: Melissa Cline Date: Wed Sep 22 15:16:03 2010 -0700 Fixed one more broken link to a cell protocol commit abd0ac2dc15e107da2538c80299b007622e396f6 Author: Melissa Cline Date: Wed Sep 22 15:13:52 2010 -0700 Fixed a broken link to a mouse cell protocol commit ba920729ef2be44ae41e2af52048ef24c8b04f87 Author: Melissa Cline Date: Wed Sep 22 15:11:09 2010 -0700 Added links for selected mouse protocols commit 7bfdff7140857c4342fcd2ec5abf975ef1c0bce2 Merge: 2497284 f388faf Author: Melissa Cline Date: Wed Sep 22 14:35:21 2010 -0700 Merge branch 'master' of cline@hgwdev.cse.ucsc.edu:/data/git/kent commit 413f71bef4f53ba289bdcb4fe4a1c33c41bdbff2 Merge: 9fe1347 fa1f124 Author: Venkat Malladi Date: Wed Sep 22 10:12:07 2010 -0700 Merge branch 'master' of vsmalladi@hgwdev.cse.ucsc.edu:/data/git/kent commit 9fe134751696f6a4671c633f1323bdb50c1e74e3 Author: Venkat Malladi Date: Wed Sep 22 10:11:58 2010 -0700 Added validation link information for E2F1 and HA-E2F1 targets commit 23fa7405495b4be66422b784b41092fadacc52cf Author: Cricket Sloan Date: Tue Sep 21 14:47:55 2010 -0700 changed treatment for AMA commit 9714c272f2a85ccf0dd5654dadaac1fadd01e733 Author: Cricket Sloan Date: Tue Sep 21 11:58:01 2010 -0700 Cluster was a tag not term commit f8fd2a1ce4eec49d61b756007d2aca57a583809f Author: Cricket Sloan Date: Tue Sep 21 11:53:30 2010 -0700 added treatment AMA50ug9h commit a6ba375b1a6e2ab7ffa444b0fb2e67a39772f168 Author: Cricket Sloan Date: Tue Sep 21 10:52:24 2010 -0700 added clusters to dataType commit ee51117be7b7548c280598c67721d236280698c9 Author: Cricket Sloan Date: Mon Sep 20 16:50:32 2010 -0700 changed DGF to DNaseDgf commit 7e5c744e5fd10dd50050e8373c73c14ed69ac812 Author: Cricket Sloan Date: Mon Sep 20 15:30:32 2010 -0700 Redid type dataType: draft 2 commit 24972849ffa13ec1596025a8e5f9573a6b0acf70 Author: Melissa Cline Date: Thu Sep 16 18:34:28 2010 -0700 Replaced a bunch of 'validation RipChip' lines with blank validation lines, to not lead to broken links commit b52a30c51f11e8a46ba05c075202bdc0d9c36ead Merge: 613538d 6273af1 Author: Kate Rosenbloom Date: Wed Sep 15 14:30:09 2010 -0700 Merge branch 'master' of kate@hgwdev.cse.ucsc.edu:/data/git/kent commit 6f5c33969e145120591f3a46b24eb40748e508c8 Author: Melissa Cline Date: Tue Sep 14 16:38:54 2010 -0700 Added new Hardison lab antibodies and validation documents commit 1ba20cdef8b2d7d415d6193efc4fab05346a95d3 Merge: 78d4baa b9d4766 Author: Melissa Cline Date: Tue Sep 14 16:07:12 2010 -0700 Merge branch 'master' of cline@hgwdev.cse.ucsc.edu:/data/git/kent commit 11c35c5d942f1cc9bcf0893a740121f1ac1b96f9 Author: Cricket Sloan Date: Tue Sep 14 13:45:15 2010 -0700 remove the rnaExtract terms that were not used at Carrie Davis request commit 31eab8dbd644e84529b4b14f0d101105734b1a32 Author: Melissa Cline Date: Mon Sep 13 18:39:13 2010 -0700 Renamed the term G1E_ER4+E2 to G1E-ER4+E2 commit d1d13230750904a52954dca577dec126a5915b2e Author: Venkat Malladi Date: Mon Sep 13 11:17:56 2010 -0700 Shortened tag for BoneMarrow to BMarrow to fit table name of 64 characters. commit 9e698c02a37eb7a785d8e6f31ea6b18f9be82c94 Author: Venkat Malladi Date: Mon Sep 13 10:31:27 2010 -0700 Updated registration term names for GATA2_(CG2-96) and LEF1_(C-19) to be consistent with ncbi naming of the genes. Also updated antibody document link to specify Myers lab for ATF3 antibody commit 9de5ff509788645e793b966d43cbae0068604e80 Author: Venkat Malladi Date: Thu Sep 9 16:19:22 2010 -0700 Added 4 new antibody validation document refrences and 3 new antibodies (BCLAF1(M33-P5B11), ATF3, GATA-2(CG2-96) and LEF-1(C-19)) for the Myers lab. commit f5e48f4dd251c01bff35be884a7abcdd1fa822da Author: Venkat Malladi Date: Wed Sep 8 15:51:26 2010 -0700 Updated validation document nameing, so that links to documents would work. Also sperated two antibodies for target YY1 commit 59c077c7f0b48825975919c4b617f2a8a3e19455 Author: Venkat Malladi Date: Tue Sep 7 13:34:53 2010 -0700 Updated Tier information for H1-hESC and NHEK cell lines. Upgraded H1-hESC to tier 1 and downgraded NHEK to tier 3 commit c1206fe33c1a69197e0425df82143beea703d152 Author: Venkat Malladi Date: Tue Sep 7 10:14:15 2010 -0700 Added Genome Analyzer II, which is the precursor to IIe and IIx. commit 1f1815551817df4ab4a49b39c5d0b28234049738 Author: Venkat Malladi Date: Fri Sep 3 11:40:30 2010 -0700 Added Antibody for NF-E2, using different term and tag name. Utilizing targert as well. commit 3512adaa73e14c6ba637fe892fe30c20beb85737 Author: Venkat Malladi Date: Thu Sep 2 17:19:42 2010 -0700 Fixed typo's in ra structure and variable names commit 45dda3705d46d3d0b85fef94467956e8a44b7d05 Author: Cricket Sloan Date: Wed Sep 1 16:58:22 2010 -0700 fixed a # typo commit bbc95eb577b5cc18541095ed99c38f58bc2f5567 Author: Cricket Sloan Date: Wed Sep 1 16:42:26 2010 -0700 added urls for ripAntibodies commit e6cc95673625edb75d355e0a014d32c62e9728a5 Merge: 5e8fd8b bec8f2b Author: Cricket Sloan Date: Wed Sep 1 10:43:59 2010 -0700 Merge branch 'master' of cricket@hgwdev.cse.ucsc.edu:/data/git/kent commit cea6eada4c40c66fba39871187f3ebe48a0b3172 Author: Venkat Malladi Date: Wed Sep 1 10:41:32 2010 -0700 Fixed cv.ra with tag's with no term and a ? in front of term commit 5e8fd8b8ec7b2e95294a2dc100f3462523664fcd Author: Cricket Sloan Date: Tue Aug 31 17:21:04 2010 -0700 added grants to the cv.ra commit a9dd7f5ce376914b750435c69abb3884d960a610 Merge: bdaefd6 136b503 Author: Cricket Sloan Date: Tue Aug 31 16:32:23 2010 -0700 trying to fix conflict commit bdaefd6a7cc1470aa0fa42fdd120b37cda90c782 Author: Cricket Sloan Date: Tue Aug 31 16:11:44 2010 -0700 added targets for all antibodies, commented on any that were not in metaDb commit e4a2ab7a45fe26c650a3f53b5812c73ca99b1c07 Author: Melissa Cline Date: Tue Aug 31 12:27:47 2010 -0700 Added a provisional cell type entry for PBDE commit 5df86e71757c0bc7f9f382c4640881cc3218d9b1 Author: Venkat Malladi Date: Tue Aug 31 10:55:31 2010 -0700 Updated Antibody validation document naming and links. commit ee6a580f344c46096cd46573142af0f53ab6ea0e Author: Cricket Sloan Date: Mon Aug 30 14:09:44 2010 -0700 The ripAntibody table is no more commit 0fad2657965b08a7323d7ca0a6af53ddbe4d14ee Author: Venkat Malladi Date: Fri Aug 27 14:54:59 2010 -0700 Added valdiation document and antibody order url for YY1 commit acae74779bfea5704e515e967faba3d1a05a7f12 Author: Cricket Sloan Date: Thu Aug 26 08:26:36 2010 -0700 Added RNA extract terms for Yale commit ad55725f8deeafb2dc6aeecdf1d3beed0783a8f5 Author: Cricket Sloan Date: Tue Aug 24 20:48:27 2010 -0700 This cv.ra has lab with projectName, note I think that matching tags is going to break this, and I did not spearate into grant and lab because Broad would break it as Broad is both a grant and a lab and in the cv, it can not be both commit 613538dcaf2364f96f3d26053fbd7974024ac1d9 Merge: 456615d 914f65b Author: Kate Rosenbloom Date: Mon Aug 23 15:45:02 2010 -0700 Merge branch 'master' of kate@hgwdev.cse.ucsc.edu:/data/git/kent commit f74d7d37d4aec889550ff38d8f2a625f8af54559 Author: Cricket Sloan Date: Thu Aug 19 15:53:46 2010 -0700 this has the ripChip Antibodies as Antibodies but commented out until we are ready to make the change commit cba344a00772ea57f1cda3d0b8c372f136764b88 Merge: 38ea9b6 3eeb362 Author: Cricket Sloan Date: Thu Aug 19 11:48:26 2010 -0700 The first draft of merging pi.ra with cv.ra Merge branch 'UCV' commit 3eeb3621896644d37660aa63afad2e3277d09138 Author: Cricket Sloan Date: Thu Aug 19 11:45:52 2010 -0700 First draft of adding pi.ra to the cv.ra commit 94c22fcf2e0957c7af3f506dd797cf637265e559 Author: Venkat Malladi Date: Fri Aug 13 13:36:13 2010 -0700 Updated Treatment Androgen and Estrogen with appropriate description. Changed display matrix labels of treatments for tracks. commit 456615d8f608dad6ddb9d0d3c5522bb0015441e5 Author: Kate Rosenbloom Date: Wed Aug 11 16:18:51 2010 -0700 Minor tweaks to labels for NHGRI reporting commit 3521370914197fa7fe08ffbbd07d698697e5cc33 Author: Venkat Malladi Date: Mon Aug 9 14:50:25 2010 -0700 Updated SeqPlatform descriptions commit 10e281c1c03f9574e0c3551250af66467faffe33 Merge: 89ef435 b72936b Author: Venkat Malladi Date: Fri Aug 6 14:50:00 2010 -0700 Merge branch 'master' of vsmalladi@hgwdev.cse.ucsc.edu:/data/git/kent commit 89ef435e631db9659d9ece4dfdfa720580094d71 Author: Venkat Malladi Date: Fri Aug 6 14:49:41 2010 -0700 Commented out documents, so that mouse cv can be released while documents can be released when a standard can be determined or mouse tracks are released. commit 92a2b1ef7e04a1c74d23eded604d75d3fa123899 Author: Cricket Sloan Date: Fri Aug 6 13:33:05 2010 -0700 Added first draft of pi.ra and cleaned up DataType commit dd9e56b2be53173be89d12e9bf943f705e415447 Merge: b6d91a9 2c32b1e Author: Cricket Sloan Date: Thu Aug 5 08:47:03 2010 -0700 Merge branch 'master' of cricket@hgwdev.cse.ucsc.edu:/data/git/kent commit 2173d33549b2e8f76bc7d4d1227b28562f8bbb6e Author: Venkat Malladi Date: Wed Aug 4 18:04:33 2010 -0700 Updated Description typo in Fibroblast and termId and termUrl for WholeBrain commit e3a0c9e08c29a83a03d3fa10b9acee2534a829be Author: Cricket Sloan Date: Wed Aug 4 16:57:48 2010 -0700 first draft of adding pi.ra to cv.ra commit 3b9a3565f27e423a97c3f160a9f610dc57da24f3 Author: Cricket Sloan Date: Wed Aug 4 15:44:02 2010 -0700 These are changed to accomodate ripTgtProtiens while we still have them and to make sure that there is a vendorId for every vendoerName in the cv.ra commit 9eba28f1cf01590350ca690b258b4734916b0c40 Author: Venkat Malladi Date: Wed Aug 4 12:56:55 2010 -0700 Added rought descriptions for seqPlatforms, need to verify exact descriptions. commit e6a7edca9e36f50b749db48dcf663c422c4ae46c Author: Venkat Malladi Date: Mon Aug 2 15:40:33 2010 -0700 Fixed two typos in terms for mouse cell lines (3143 should be 3134 and Cerebrumm should be Cerebrum). commit fa89b4d1b722602ae850962e8699ceb4b258673f Author: Venkat Malladi Date: Wed Jul 28 16:29:53 2010 -0700 Added age E0 to the age for embryonic stem cell age commit 3905606cbb38a0960c2e59fd07c6b3a501c51a6e Author: Venkat Malladi Date: Wed Jul 28 15:25:01 2010 -0700 Updated mouse registered Cell lines registered by UW lab commit dfc6c9e30aac71d0b166d4f3300f8eeea8fe4baf Author: Venkat Malladi Date: Mon Jul 26 15:01:39 2010 -0700 Updated type of termP to term commit 68fac088bffa52f7e3217f2790df4feff9bbebac Author: Venkat Malladi Date: Mon Jul 26 14:41:05 2010 -0700 Added 22 cell lines from UW. commit c67f3745398271e83f76f5454f4d9009186e30fb Author: Venkat Malladi Date: Mon Jul 26 09:45:41 2010 -0700 Fixed description for TAM treamtent for quantity of 2uM to 1 uM. commit 7d82d8442e76b62887b6fce76a6d6e2f0bc1024b Author: Venkat Malladi Date: Mon Jul 26 09:17:43 2010 -0700 Added 1 new treatment tamoxifen for Myers lab commit c7b0e51932e047193782162e35fbc5e9798a9c3f Author: Venkat Malladi Date: Mon Jul 26 09:10:30 2010 -0700 Remvoed orderUrl for GM12878 registered cell lines, not applicable commit 23af99a04dc22f839894dd47bddcd255b5038244 Author: Venkat Malladi Date: Mon Jul 26 09:04:54 2010 -0700 Added 4 new cell lines for X-inactivation in GM12878 cell lines registered by the Myers lab commit aa751f5d30d4fb72690cd26c6e4fa3e3ed5e69c1 Author: Venkat Malladi Date: Tue Jul 20 15:05:14 2010 -0700 Updated the Mouse cell type controlled vocabulary to be consistent with what was registered as well as update the CGIs to display the correct headers for mouse Cell Type commit e414939fa196e675d407a6ad0577462a7f269372 Merge: 7597da3 cfac70b Author: Cricket Sloan Date: Fri Jul 16 09:57:11 2010 -0700 Merge branch 'master' of cricket@hgwdev.cse.ucsc.edu:/data/git/kent commit 7597da39b16483a73d8800cc0ac394f16bf81091 Author: Cricket Sloan Date: Fri Jul 16 09:55:59 2010 -0700 Adding the new caltech-RNA seq tracks and fixing cv.ra to comment out ripTgtProtiens until we are ready commit 70294a048f471b3ee53f63789b02322596197ea0 Author: Tim Dreszer Date: Wed Jul 14 11:41:35 2010 -0700 NH-A is no longer provisional commit 0655b69609088a6fd7cb5cc39f78813bc2c525ec Author: Cricket Sloan Date: Tue Jul 13 16:52:17 2010 -0700 Changed all references to Yale_TFSB to Yale_TFBS commit b1813d80821643305b62b0604c479a22fb1f85ee Merge: df462dc 072e436 Author: Cricket Sloan Date: Tue Jul 13 16:47:21 2010 -0700 Merge branch 'master' of cricket@hgwdev.cse.ucsc.edu:/data/git/kent commit 489f78ad80117570c6ebf6fa3ce7388f3b717925 Author: Venkat Malladi Date: Tue Jul 13 16:33:02 2010 -0700 Added 1 submission 1623 to SYDH TFBS Track commit 43e8ca8865f0316e629c3c8f1d7cf74e3cdf329b Author: Cricket Sloan Date: Tue Jul 13 15:11:30 2010 -0700 Added growth protocol to protocols commit cc675c7d55041d7ddc40665e8d6231328c68876c Author: Tim Dreszer Date: Tue Jul 13 14:13:40 2010 -0700 Provisionally added NH-A to finish Broad's pre-AWG meeting submissions commit 7b514b86ee40f5d2ad82e4e1cc38409f5de61cdb Merge: f4efca5 0acbbdc Author: Cricket Sloan Date: Mon Jul 12 15:49:53 2010 -0700 Merge branch 'master' of cricket@hgwdev.cse.ucsc.edu:/data/git/kent commit 0acbbdce85b900731876343409c968957eac3ba6 Author: Kate Rosenbloom Date: Mon Jul 12 15:37:03 2010 -0700 Adding geo terms for seqPlatform entries and making the term tag more concise commit d7f23ba2d5782485e5449bb8f69b78f5ddf7a1b4 Merge: 7522df2 76e41fc Author: Cricket Sloan Date: Fri Jul 9 11:44:25 2010 -0700 Merge branch 'master' of cricket@hgwdev.cse.ucsc.edu:/data/git/kent commit 8fdd534818443a0c4c83ed4666a94af5266c93db Author: Venkat Malladi Date: Fri Jul 9 11:26:42 2010 -0700 Add category =L cell Line for mouse cell MEL commit 49d98b88d0226e4512d30496bcb7bb095c573925 Author: Venkat Malladi Date: Fri Jul 9 11:23:50 2010 -0700 Accidently used number 0 instead of O when registering DMSO_2.0pct commit d5600e701fe1594c869232db7e46c4966cd94f26 Author: Venkat Malladi Date: Fri Jul 9 09:51:44 2010 -0700 Updated 5 cell lines that were missing tier designations commit 7522df2c65cb1d8c52ba7f6ed29f164e8f6ff1fb Author: Cricket Sloan Date: Thu Jul 8 17:44:45 2010 -0700 This is the attempt at replacing ripTgtProtien with Antibody. I have most of the work done, but it doesn't work with encodeVocab commit cf9161c74c63e3864cd2bc0f30bbf5bb3d985e94 Author: Venkat Malladi Date: Thu Jul 8 16:19:27 2010 -0700 Added new treatment DMSO_2.0pct commit 09ed8bfa0f203ecb818143c81c1f1bf997a4ddb1 Author: Venkat Malladi Date: Thu Jul 8 14:29:03 2010 -0700 Added new seqPlatform variable to cv.ra and fields.ra to check seqencing platform information for GEO submissions commit 3f95eaa01c0fc04abbd7f85f9cf01f2f88888630 Author: Venkat Malladi Date: Thu Jul 8 14:27:36 2010 -0700 Updated hgEncodeVocab to find path for the valdiation documents for the antibodies now mentioned in cv.ra commit 2f22010006239682ab132797f024ba8fe800bdaf Author: Venkat Malladi Date: Tue Jul 6 15:06:55 2010 -0700 Commented out the validation lines that include file names for 2 antibodies commit a273d80e7d9747a56dc8106243bdc9eef5b5c06b Author: Venkat Malladi Date: Fri Jul 2 15:12:14 2010 -0700 Changed nm to nM for 2 treatments Estradiol_10nm and Genistein_100nm to register them correctly. commit 1f96bdb38f1aa982a2356b4a8f4036d47edc9ee8 Author: Venkat Malladi Date: Fri Jul 2 15:08:23 2010 -0700 Added 7 treatments registered by the Hudson Alpha (Myers) lab commit 9c8b6f4047511f8a093952702231e17e4d43b239 Author: Venkat Malladi Date: Fri Jul 2 12:42:20 2010 -0700 Added document names for the validation documents provided for Antibodies commit b801caac44e463c8edbaf9200f8f858b9987d286 Author: Venkat Malladi Date: Fri Jul 2 12:15:14 2010 -0700 Added 3 new antibodies, 2 with validation documents. Antibodies added: Pol2(phosphoS2),ETS1,MEF2A commit 4b112d95a8ed3f10d24a63750933c64f83a6597d Merge: 69dbdc0 e58a31f Author: Melissa Cline Date: Thu Jul 1 14:53:37 2010 -0700 Merge branch 'master' of hgwdev.cse.ucsc.edu:/data/git/kent commit 3ba06b788f1010f80ae6e51b5326d5f794f93656 Author: Kate Rosenbloom Date: Wed Jun 30 16:49:29 2010 -0700 Remove special chars from tags. Minor tweaks for consistency (e.g. caps) commit fe5c9a0b0980a1893d6bbf70ebdc0f53edc79e55 Author: Venkat Malladi Date: Tue Jun 29 14:05:52 2010 -0700 Updated the sex of MEL (mouse) to U, unidentified as we do not know this sex at the moment. commit 1dd3274609a365617b24ebe59439addab618663b Author: Melissa Cline Date: Fri Jun 25 17:56:54 2010 -0700 A few more minor fixes from Katrina commit 264574d592b9f116fb965beea81e8285baaf772a Author: Melissa Cline Date: Wed Jun 23 16:50:10 2010 -0700 incorporating feedback from Katrina and from review commit 06be10dc9a809e92d82e2be00e58df79b6407670 Merge: 85546fa 7fd9ee9 Author: Brian Raney Date: Tue Jun 22 15:48:45 2010 -0700 Merge branch 'master' of braney@hgwdev.cse.ucsc.edu:/data/git/kent commit c65ee6c705a6bfa03c5acf5a529ef2a04abea24b Author: Brian Raney Date: Tue Jun 22 15:34:41 2010 -0700 fix typo commit bb5fe7eb32b2230f201902f950cf524e216aaf53 Author: Tim Dreszer Date: Tue Jun 22 11:56:30 2010 -0700 Filled out details for 2 antibodies for Broad commit c522511d920a2633d4a254a411acf9411d760d2e Author: Melissa Cline Date: Mon Jun 21 17:12:20 2010 -0700 Added new mouse cell types commit b69b3099c094db621f13bc1457d7f6e0ae4b14f7 Author: Tim Dreszer Date: Mon Jun 21 13:03:17 2010 -0700 Did I say 76. No it is H3K479me2 commit 360b7d4071aff38581b547414fa88d288f5f523e Author: Tim Dreszer Date: Mon Jun 21 13:00:19 2010 -0700 Added 2 antibodies provisionally commit f3cffc7917dd3e275cb4aed10a121929bdc9072e Author: Tim Dreszer Date: Fri Jun 18 16:07:24 2010 -0700 CKM is male, not female commit 2bb11e279db8b3f64fd929319944219f6a8695c0 Author: Brian Raney Date: Fri Jun 18 11:52:35 2010 -0700 try this again, add ilNA field commit 377b5bcb24a157093ac26c0b643eb65143be30c0 Author: Brian Raney Date: Fri Jun 18 11:35:22 2010 -0700 take out NA for insert length since it was interfering with NA for mapAlgorithm commit 5a0ac2018b73e594f5140f5b3463333fff073209 Author: Venkat Malladi Date: Thu Jun 17 10:11:48 2010 -0700 Changed Sex of LHSR cell line from F to M to be accurate according to OpenChrom Labs commit ff5bd7b8ddcaa73d2ef565f97a11e84f93491cef Author: Brian Raney Date: Wed Jun 16 16:18:26 2010 -0700 added some words for Wold. New insert lengths and a code for TopHat as aligner commit 24babbb660402caa1322291bf0b48c46845fa9cf Author: Melissa Cline Date: Mon Jun 14 17:48:49 2010 -0700 Documented most stanza types commit 22bd1a900202a28eb5983bf4df81f6e6d004fc77 Merge: 2b44648 9f3b2f0 Author: Melissa Cline Date: Mon Jun 14 12:33:08 2010 -0700 Merge branch 'master' of cline@hgwdev.cse.ucsc.edu:/data/git/kent commit 2b446481045ab61911b109b9ad038d9c103d887e Author: Melissa Cline Date: Mon Jun 14 12:24:56 2010 -0700 Added a header comment block describing the tissue type section commit 9f3b2f053f8f2b5fb8f752cc79ccca29885e9e5d Author: Venkat Malladi Date: Mon Jun 14 12:19:33 2010 -0700 Added line validatio missing to cv.ra commit 6b10e99653778d257c704c09a567c6c211ffab60 Author: Venkat Malladi Date: Mon Jun 14 12:09:23 2010 -0700 Added Antibody STAT3 from Snyder lab to cv.ra commit f88ea54b20d0561a5d89fe8cea1c7dd25ae80921 Author: cline Date: Mon Jun 7 21:02:41 2010 +0000 Fixed the protocol names for ECC1 and T47D commit d17a4c8010caf04e0b70c87c7a55be0a5bd61e8b Author: cline Date: Mon Jun 7 21:00:21 2010 +0000 Added a few more fiends for ECC1 and T47D commit e017aabd30b494864fe0ef75f6f3abbfbb06a2c9 Author: tdreszer Date: Fri Jun 4 18:09:37 2010 +0000 Put them in order. commit caede43316d216cf8fa58ccf5571486c6d898b7e Author: tdreszer Date: Fri Jun 4 18:08:05 2010 +0000 Added 2 approved cell lines for HAIB commit 32521f546814b9ff3de360364a73a5b7beae2b96 Author: cricket Date: Thu Jun 3 22:59:34 2010 +0000 dded ripInput to the ripTgtProtien table commit 96030cdfc6325d9873bbf760a0ed8c048b7ba889 Author: tdreszer Date: Thu Jun 3 19:39:11 2010 +0000 Removed the duplicate 'None' term from ripTgtProtein commit dbad8a68fb9ece03d313ba9874adef0cfd2acd8c Author: vsmalladi Date: Thu Jun 3 17:50:46 2010 +0000 For term AP-2gamma: changed santibodyDescription -> antibodyDescription to be consistent with all other entries commit 523c463c06813b61a747b1d7e7749c39dcd8af35 Author: cline Date: Thu Jun 3 03:18:01 2010 +0000 Added mouse vocabularies including sex and age commit 39f3ed8bc9e320c0c4da55bd81b5f8d0e7294609 Author: cline Date: Tue Jun 1 02:50:47 2010 +0000 Added U2OS to the Tier 3 human cell types commit 89ede50f480b6a0d702fbbf2052eaaeec1464934 Author: cricket Date: Sat May 29 02:25:14 2010 +0000 Try that one more time. Removed Input from ripAntibodies and put None in ripProteins. commit 0040a174366a8fc9c317387be004094290295d9f Author: cricket Date: Sat May 29 02:20:57 2010 +0000 Removed the Input in ripAntibodies and was able to do this better commit ecd12c6b1c94cd8e70ff5da68642c623a9010952 Author: cricket Date: Sat May 29 01:49:57 2010 +0000 I entered an Input type for the ripAntibodies, so that we could validate over the weekend. This should be removed and done the same way that Antibodies is. commit 07dfea88f4246a1a6aed1ced6a15f22e5d5af94c Author: cricket Date: Fri May 28 23:37:28 2010 +0000 added more ripAntibodies commit 0058dfb2d3a99393f8bc0e7bb0dcd40a7fc1bfbc Author: cricket Date: Fri May 28 20:51:00 2010 +0000 Moved CELF1 from ripAntibodies table to ripTargetProtien commit fae217d5e4530d00f9f5aa18091370a1821b53c0 Author: vsmalladi Date: Thu May 27 17:15:58 2010 +0000 Registered New Cell Line: Raji with provided protocol from SYDH (Farnham). commit 8636846fdda3f2569e28ff26fd89d64eb4b6e9db Author: tdreszer Date: Wed May 26 20:10:56 2010 +0000 A lot of 'organism Human' lines were missing from cells commit 2a658ded03b77332beefbef7c293427f79ae6d57 Author: cline Date: Mon May 24 18:57:44 2010 +0000 Added tissue types for cell types commit 013b30b7f611be6195a816f1bb30d222fc38e244 Author: kate Date: Thu May 13 17:43:31 2010 +0000 Flip mouse cell color to match human analog (k562) commit 5013ea5b343ebff861404154f4c4fd43cbae376a Author: krish Date: Mon May 10 20:24:28 2010 +0000 added missing organisms commit 858b78f45b6bc41ddc5e9fb36dd6dd048c732a63 Author: tdreszer Date: Tue May 4 17:08:52 2010 +0000 Added 2 new protocols for HAIB TFBS commit 40be69015adb9109aa3e56d426855329021c4434 Author: tdreszer Date: Fri Apr 30 15:25:54 2010 +0000 Forgot to check this one in for Farnham commit 66cc62f44a3b0e55de06de8354f3071a4151f1a3 Author: vsmalladi Date: Wed Apr 28 20:59:18 2010 +0000 IRF-1 to IRF1 commit fb9b37ba6aad3861ea2a3e25af430d9e63a6bb41 Author: cline Date: Wed Apr 28 18:11:11 2010 +0000 Moved the Ccnt2 antibody entry to uppercase (CCNT2) commit a99e3221acbfb3202647d31389fb1dabf757f70f Author: cline Date: Wed Apr 28 01:18:47 2010 +0000 Addd the missing targetId and targetUrl for TFIIB. commit e18eab8d2b1bec6af1deef15bda658ef8b8bf8f2 Author: cline Date: Wed Apr 28 01:14:09 2010 +0000 Added antibodies ERalpha(a) and ERalpha(b). Removed some extraneous whitespace on the targetId line for TFIIB. commit 66a9030ee203696c2d746238b239e40c40d3aae6 Author: cline Date: Mon Apr 26 20:20:17 2010 +0000 Added some new antibodies commit 0b5f2da7d3b4496719969863a2c6cea2e158bf45 Author: tdreszer Date: Thu Apr 22 20:58:16 2010 +0000 Demoted 'input' to 'control' commit 9ecd67277cbc4e76d0135779c4ea193fa071bb78 Author: braney Date: Thu Apr 15 15:50:40 2010 +0000 make H1-hESC into male. Poof! commit 69731afa5e66003fbcf9577ed56692bdc7da4cb0 Author: cline Date: Wed Apr 14 23:36:11 2010 +0000 Added a displayName entry for the cases where there are two or more entities of the same class, and the term field (which has to be unique) cannot represent both entities accurately. commit 39e8e697d75fb572a0d9cf6f7687eabe75536c04 Author: cline Date: Wed Apr 14 23:10:33 2010 +0000 Added antibody H3K9acB commit 82dd79aff88645a6b53fbfb4c5225e551784b400 Author: cline Date: Mon Apr 12 19:15:17 2010 +0000 Added antibodies H3K4me3B, H3K27me3B, H3K36me3B, IRF3, TBP, and USF2 commit 09a2b0dc627c023676a7f97671ee82716c7d9233 Author: cline Date: Thu Apr 8 18:43:21 2010 +0000 Changed the vendor ID and link for the PABP1 rip antibody, due to the vendor discontinuing the old product commit cfd4f18b1d834edbabc24c12bf31cd3ba500d5ec Author: cline Date: Wed Apr 7 23:22:08 2010 +0000 Added a whole slew of RIP antibodies commit 0c2b55ba4fd979341ae18a0a0574060de12bced1 Author: cline Date: Mon Apr 5 21:33:41 2010 +0000 Revised the description of the UC Davis input, according to a request from the UC Davis folks commit e03e47c7a5a892d92892cbb3d0f2b1eb53fd4bde Author: braney Date: Mon Apr 5 20:17:38 2010 +0000 add 20k fragment size commit 7b228ea6053c69f612d442a386673b3274c4b5bb Author: cline Date: Mon Apr 5 19:24:41 2010 +0000 Added two antibodies: ELK4 and IRF-1. commit 1e36a8ec71f1daa29ec0dda6991732c33030679b Author: cline Date: Fri Mar 26 01:39:35 2010 +0000 Changed the sex of CH12 to U. commit 45ddc8223222071f8d4e86b63b37afe84a87834a Author: cline Date: Thu Mar 25 00:02:35 2010 +0000 Re-added CH12 commit 1a4860868ce74f129361e2c1cfe8263cab94a4b6 Author: cline Date: Wed Mar 24 23:57:47 2010 +0000 Adding CH12, provisionally commit 0ebbe2fe5cb68bd5226f04e48e51b3c1dd09d87c Author: tdreszer Date: Wed Mar 24 20:37:05 2010 +0000 Added missing JunD description and antibody validation document variable commit 09fde0a38b8cca9ff4f59034120017b41a169ee6 Author: cline Date: Tue Mar 23 20:59:09 2010 +0000 Corrected the BTO URL for MDA-MB-231 commit b181e5dadfd8cc606c82f3a6a1cdbb2de2dfc36e Author: cline Date: Tue Mar 23 00:11:01 2010 +0000 Added 5 new cell lines to cv.ra. commit dcd9e0740f1377a213d22b34997b489aee8dbc95 Author: tdreszer Date: Fri Mar 5 22:06:39 2010 +0000 Moved certain terms from 'Control' to explicitly 'input' commit c9a21e6ad37328954a3eed161c5ee8c5a416854c Author: cline Date: Fri Feb 12 23:08:31 2010 +0000 Temporarily commented out MCF-10A. commit 28bf13940e6618b0d337c6b21eeeeee23235a7dd Author: cline Date: Fri Feb 12 18:58:19 2010 +0000 Added the MCF-10A cll type commit f10c301583f6312727493cfc3637fdc14085d416 Author: tdreszer Date: Wed Feb 10 20:52:05 2010 +0000 And one more time commit 4115d49463ca9053964ac70575bdd695c1d9af64 Author: tdreszer Date: Wed Feb 10 20:49:47 2010 +0000 More protocol naming adjustments commit b7a189c1198c35216403ad522b3ce88596aeeabf Author: tdreszer Date: Wed Feb 10 20:43:55 2010 +0000 Made protocols more specific to groups. This is the only identification of a cell line to a praticular group commit 5d0865790ea3ef0fd026d77ee137095c0b2a2d19 Author: tdreszer Date: Wed Feb 10 20:18:09 2010 +0000 Marking prostate cell line as provisional since we have no approved protocol commit 2af3784511609ddd7e1ba5b073e0121b054222a5 Author: tdreszer Date: Wed Feb 10 20:11:13 2010 +0000 Three cell lines for Crawford's group are no longer provisional. commit d09b2d90319d1dadac9ea95b18cdbdf356657a63 Author: cline Date: Thu Feb 4 01:48:57 2010 +0000 Changed the sex of the human cell lines from Male to Unknown when there was no obvious gender data available. commit ca4673e878186d2a82ca5a311498b870f2996bd6 Author: kate Date: Tue Feb 2 18:45:11 2010 +0000 Add label for reporting cosmetics commit a750685949b17a405fe81c30932cc6d34f8b4f03 Author: cline Date: Tue Feb 2 01:56:47 2010 +0000 Added sex information for the human cell lines. commit a55ac3ff5672b7984cdeb4647171379352df82f2 Author: tdreszer Date: Fri Jan 29 17:51:41 2010 +0000 Minor adjustments to cell descriptions and officially added UCDavis as control type. This had been implied for some time. commit 3c0ace1898848b73bfb4343fc1b3193591e20c41 Author: kate Date: Thu Jan 28 01:00:17 2010 +0000 Unify RNA-seq here for reporting -- will do for trackDb when convenient commit a4e5db9851dd3d4f86a38913e6ba5a062238129c Author: tdreszer Date: Wed Jan 27 19:20:11 2010 +0000 Changed Mouse_IgG to IgG-mus and Rabbit_IgG to IgG-rab commit 5ef5b4f0e4936a3464470831b37261a2ea79915d Author: tdreszer Date: Tue Jan 26 22:04:14 2010 +0000 pravastatin treatment illucidated by Yale commit 2fbdd1fa2bdbf21d4a82d1ad3dec8a6cd824f6e6 Author: tdreszer Date: Tue Jan 26 20:25:28 2010 +0000 Adde pravastatin treatment and renamed SREBP1A to SREBP1 for Yale commit f16e7b0ed8a0a3aadc71372117c682a1bd47b9fa Author: tdreszer Date: Tue Jan 26 20:00:17 2010 +0000 Some metadata corrections for Yale commit 8855eae464d6eaf080334888e07e0dfcdbcf1e67 Author: tdreszer Date: Sat Jan 16 00:41:40 2010 +0000 BRF2 is no longer provisional commit 8cdfcd984c48332592fde28a361d37043ced498f Author: tdreszer Date: Sat Jan 16 00:17:12 2010 +0000 provisionally added BRF2 for Yale commit 3483b7f19be34179aea5cbbb59c623c40a52c869 Author: braney Date: Fri Jan 15 22:47:26 2010 +0000 add 1x25 readType and bow10 mapping method commit a788797754e8560615296e26f1d7032f1526a682 Author: tdreszer Date: Fri Jan 15 21:17:17 2010 +0000 Added TFIIIC antibody for Struhl commit 19766d6d80369c22a377d7e2301f0736d41152ae Author: tdreszer Date: Fri Jan 15 20:09:36 2010 +0000 Added antibody, fixed antibody tags and spelled insulin correctly commit 0263e181a1bbb5dc872df495e66fe4bbe8cbd0f5 Author: braney Date: Fri Jan 15 18:21:54 2010 +0000 add insertLength of 400 commit f6f408f0cfe4866d359b097845bd223982134d03 Author: tdreszer Date: Thu Jan 14 23:44:30 2010 +0000 Finally got the proper description for Nrf1 antibody commit fca4516679bf4c26a3346112c25388405dd85bfc Author: tdreszer Date: Thu Jan 14 22:23:17 2010 +0000 Added insolin and forskolin treatments for Snyder commit 7b83756473c58c0c182678187255c6ac0436286d Author: tdreszer Date: Thu Jan 14 20:36:20 2010 +0000 Fixed a number of problems with cut and pasted special chars (alpha,gamma,etc.) commit 69e3f9e4e4915315cf42e4c3ad058cc24c3e8a42 Author: tdreszer Date: Thu Jan 14 20:25:40 2010 +0000 Added 2 new cell lines for HudsonAlpha commit 51646baa39648929882c6eddafda9a02e7ad9eba Author: tdreszer Date: Thu Jan 14 20:01:05 2010 +0000 Six cell lines from provisional to approved for Stam lab commit 1af215b45e17badf88d15002fcd26e7ea790134f Author: tdreszer Date: Thu Jan 14 19:36:06 2010 +0000 Added 6 new antibodies for Snyder commit b3725adc745226d8459683d9f90cc03149918497 Author: tdreszer Date: Thu Jan 14 18:06:23 2010 +0000 How many changes is this going to take until it is correct? commit 0a1caf841dbd13c4ba144184374d7b54df1aeea3 Author: braney Date: Thu Jan 14 04:03:50 2010 +0000 add 1x75D commit 64b7e883670fd8566653eaf6c93782dd5ba7c580 Author: tdreszer Date: Wed Jan 13 21:34:59 2010 +0000 Nrf1 didn't have a type commit 0c0a1bd120c6dbdd7db5cbe4f619eb881f71a898 Author: tdreszer Date: Wed Jan 13 20:50:29 2010 +0000 Added Nrf1 as a provisional antibody so that Mike Wilson can get his data in before the freeze commit f8abd6b22a6e2e1623d7ba0d58d6f2a6760c4938 Author: tdreszer Date: Wed Jan 13 00:25:07 2010 +0000 Added G1 phase for Stam lab commit a0b2cfd5852fde61aa2c83ccaa6d6c1694f0f194 Author: tdreszer Date: Tue Jan 12 20:58:45 2010 +0000 Change 10 cell lines from provisional to approved commit 2c17bdb8ccce2576eb5c831188fe862c302f8291 Author: tdreszer Date: Tue Jan 12 18:19:47 2010 +0000 Missed GM12872 in earlier ci fo cells for Stam commit 9dbf117e4c72243c3d84bd2d9d95274b9991c977 Author: tdreszer Date: Mon Jan 11 17:30:58 2010 +0000 Added 5 new (provisional) cell lines for Stam and 4 new antibodies for Snyder commit 3ae07a021e86e94db4fa91f87d5f31a795c25575 Author: tdreszer Date: Sat Jan 9 00:32:56 2010 +0000 Added Rabbit_IgG for Snyder commit 9f99b9d39d6829b87bba84d3a6a71880fc4bdf9e Author: tdreszer Date: Fri Jan 8 18:44:59 2010 +0000 Changed name of treatment commit d8aa09d37c18e74390ce0b0b97def99a1ad9aaae Author: tdreszer Date: Fri Jan 8 18:41:05 2010 +0000 Added 5 new cells (3 provisional), 1 new antibody and 1 new treatment commit b8254eaff0506bb9708893d4515aa99e9e9abf5a Author: tdreszer Date: Thu Jan 7 23:29:13 2010 +0000 Removed restrictionEnzyme 'None'. This should be done by controlled vocab commit e3cddd8897ac5928700a44b8f3635644b5877b7a Author: braney Date: Wed Jan 6 21:21:30 2010 +0000 None for restrictionEnzyme. Some new readTypes commit ff18e1369b46916fb753bcc900fb36f3b35cda94 Author: tdreszer Date: Wed Jan 6 01:02:52 2010 +0000 Added 4 antibodies for Snyder lab commit b6738caf65083655c4ded6008cf0ab15c109c593 Author: tdreszer Date: Tue Jan 5 00:10:21 2010 +0000 Added antibody ZNF274 for Snyder lab and reordered a couple of antibodies commit e9655d875a3cf96f4bce939e5f2488bb0d7d651d Author: tdreszer Date: Mon Jan 4 23:43:18 2010 +0000 Altered 'pending' cell lines to put '(provisional)' in description. commit 5d1c8201bf42194f54619e997435966f70d0c1e4 Author: tdreszer Date: Mon Jan 4 23:38:22 2010 +0000 Added 10 provisional cell lines for Stam lab commit e836565c31b6a9602b850bdb36cdc9be9ae63f35 Author: braney Date: Mon Jan 4 20:27:41 2010 +0000 fix some strings commit c2a8a8d44770e38c45af9530d5849431fb488c68 Author: braney Date: Mon Jan 4 20:12:55 2010 +0000 change tag for longPolyA commit 1c3118785cdad6ec89a01b00f0a26b5d32e0f2ec Author: tdreszer Date: Mon Jan 4 19:54:11 2010 +0000 Added 14 new tier 3 cell lines for Snyder and Stam labs commit b2c4e9d849cc1f2c2dad662e2f75951bfc7265c1 Author: braney Date: Mon Jan 4 19:52:12 2010 +0000 add 1x75 commit d6a87784d54df6d85aaa55437acc59b0b2898a51 Author: braney Date: Mon Jan 4 19:48:26 2010 +0000 add new maapping protocol commit 54ff0ffb7101bf2dd814df24342a3f765bb14d5b Author: braney Date: Mon Jan 4 19:42:51 2010 +0000 add new mapping algorithm BB2 commit fa51c9a011130b26e3ae14dea067a7f4c96667d5 Author: kate Date: Sat Dec 26 20:16:10 2009 +0000 Add datatype for SUNY commit 0de23d2acf4225783cfec7e84f2a4f15717bed6b Author: kate Date: Sat Dec 26 01:11:08 2009 +0000 Add CV term for submissions versions (used by reporting) commit 0eb21e310b22f2c10ff2e6e740a60b56199b7dcc Author: kate Date: Tue Dec 22 06:06:30 2009 +0000 Add labels and CV of data types, for use in automated reporting commit 7f0d3a25ae24248a2908b170db63a90ca416a15b Author: tdreszer Date: Tue Dec 15 22:24:27 2009 +0000 Fix BTO term for myotubes commit f745ada0bc061e830393cda79560458316b52035 Author: tdreszer Date: Tue Dec 15 22:19:53 2009 +0000 Added 2 cell types for Broad commit 1526f8802f4d911efea81b49168fb0e2e49ab57a Author: tdreszer Date: Tue Dec 15 00:10:16 2009 +0000 Shortened more tags because tableNames and sorting commit 27ad91d2cd64ff0a27552be96c4f8273400f5e9a Author: tdreszer Date: Mon Dec 14 23:41:44 2009 +0000 Shortened some tags because tableNames are over-flowing commit 9fd7083a12cf1ca9a9ff6950bb61215d03b5b441 Author: tdreszer Date: Fri Dec 11 21:29:43 2009 +0000 Greg Crawford finds his typo commit 02f5f433c74ebc6c7d0f415c2c0ee57905047c25 Author: tdreszer Date: Fri Dec 11 20:38:46 2009 +0000 Added one more cell line and updated others for Crawford. Fixed INFa4h concentration to what Greg specifically requested. commit f2d77de0d120b1984eeb5e15c82dcbe3bee3e0e1 Author: tdreszer Date: Fri Dec 11 18:33:48 2009 +0000 Added cell lines and treatments for Crawford. Will need to extend cell line definitions. commit 92955fd76ed23ceb7ec8b384cc847e170f1e6fc0 Author: tdreszer Date: Wed Dec 9 18:03:19 2009 +0000 Added some treatments and protocols for HAIB commit a26dcadaba965fb1fe6efb26ca553816555a3665 Author: tdreszer Date: Mon Dec 7 17:08:29 2009 +0000 Switched Gliobla and Medullo commit 1530a40a5461b3771bbcfb34b099c226cc55d8d4 Author: kate Date: Sat Dec 5 00:20:47 2009 +0000 Add new grants from ARRA (stimulus) and other Mouse ENCODE (LICR) commit 50055e8a87bc3b305a1d0a2be6231bb0d1f01972 Author: tdreszer Date: Thu Dec 3 23:37:26 2009 +0000 Renamed 6 cell lines by request from Greg Crawford commit fa26025b1a12a5456490929e2a3d540b588e918d Author: kate Date: Thu Dec 3 22:19:50 2009 +0000 Add organism setting to Cell Line entries (all existing ones are for Human) commit e0e41be4a8ef91da9f3ab3677c17dc4ecbf09158 Author: kate Date: Thu Dec 3 22:13:22 2009 +0000 Make targetLink handling symmetric with other links (remove special syntax). Splits targetLink setting into two -- targetId and targetUrl commit f34f15466a85146636564fe55515696f8fc6263b Author: braney Date: Thu Dec 3 17:54:13 2009 +0000 add some words to the definition of total commit c58288177907395e4609c146b5031f45a7b418c1 Author: tdreszer Date: Thu Nov 26 02:10:12 2009 +0000 Added 5 more antibodies for Myers commit 2c9b3e758c0455eb0dfea8c6679b939d89f61d69 Author: tdreszer Date: Thu Nov 26 01:33:32 2009 +0000 Added BCL11A, BCL3 and BHLHE40 for Myers commit 8e0f727c20cd71fbc86664d5c8480c0392bc9fc0 Author: kate Date: Wed Nov 25 21:17:41 2009 +0000 Add color (green) to H1 es cells commit 45fc151ab58ff26079e0f9b807b23bfd84b51159 Author: kate Date: Wed Nov 25 01:17:12 2009 +0000 Add tags field (unique, no special chars, alpha start) to each entry commit 896c1e8e1ee3d01004a85934b2b8d48a44fdb3b2 Author: tdreszer Date: Thu Nov 5 18:08:18 2009 +0000 Added MCF-7 protocol for Farnham and removed the obsolete HA antibody listing commit 80028a7dc9f900a79e0c5303b741a6d3c9fe84ba Author: tdreszer Date: Fri Oct 23 16:56:37 2009 +0000 Vendor for H3K4me3 has changed. commit d1e47db1cfd05f42606682c6bb9843119eee957c Author: tdreszer Date: Thu Oct 22 17:21:49 2009 +0000 Change BAFT to BATF commit f91c3c5d8d7a19491f97be9bcd37c1a11810d510 Author: tdreszer Date: Thu Oct 22 17:02:23 2009 +0000 Added 10 new antibodies for Myers and one for Farnham and Myers commit adcfb5d34c566776227e9444c29c912442bf743e Author: tdreszer Date: Thu Oct 15 21:55:28 2009 +0000 Don't you know I am just trying to up my total modified lines in cvs-reports. commit 2b7eff469dfe7cf07db6eb41eaafdf2ffd09ac8a Author: tdreszer Date: Thu Oct 15 21:49:48 2009 +0000 Type HA-E2F1 not H1-E2F1 commit c2b57bc4b6feb4fe910db5b5eeb1c87570b6261a Author: tdreszer Date: Thu Oct 15 21:47:58 2009 +0000 Altered E2F1 to HA-E2F1 at Farnham's request commit 9c7de315c831e9118e1feda57a2b9361ce097b27 Author: tdreszer Date: Tue Oct 6 18:12:24 2009 +0000 Changed BJ-tert to BJ by Stam lab request. commit 2f60478b6c79a97990e3d9ff297df620ae5700ed Author: tdreszer Date: Fri Oct 2 22:48:36 2009 +0000 Sorry changing NFkB back to NFKB as this seems to be a valid term in the literature commit 86d33dfae1b996f012782275cecc5ea83b25a743 Author: tdreszer Date: Fri Oct 2 22:35:42 2009 +0000 For Yale added NF-YA and NF-YB and renamed NFKB to NFkB commit 2cf74a749e6d2dcca19e925a1cce86d72af2194d Author: tdreszer Date: Tue Sep 29 23:15:29 2009 +0000 Added antibody NFKB and treatment TNFa for Yale. commit 4717e76b4aa27db84eb1fbfc40066d4ef08ab677 Author: tdreszer Date: Mon Sep 28 19:36:29 2009 +0000 Added Antibody HA and cell HGF commit 7cecaa36e927df794001ae45fb4d84a98dcb51bb Author: tdreszer Date: Thu Sep 24 20:03:40 2009 +0000 Changing H1 ES or H1_ES to H1-hESC for clarity commit 2b3f29ddcec4879a5a22d302a5b46bd58e0349b2 Author: tdreszer Date: Thu Sep 17 21:33:54 2009 +0000 Changed antibody TCF4 to TC7L2 commit 2b0244474c1ddbb92a6658aef6a352b8f76b19d8 Author: tdreszer Date: Mon Aug 31 23:21:00 2009 +0000 Added a few antibodies and added targetLink to antibodies commit fd23f37707ab8743b333e075bb6eedb28bd8b319 Author: tdreszer Date: Tue Aug 18 17:51:15 2009 +0000 Added two for Duke/UTA commit 98d6e5c837566507d1e64d784ae2b87e327cf301 Author: tdreszer Date: Tue Aug 18 00:08:45 2009 +0000 Included the protocols commit 291bd3deea2d1d9ca4048be4de50ab1b85bd3ece Author: tdreszer Date: Mon Aug 17 23:56:56 2009 +0000 Four for Myers, two for Stam commit 0667b2fdbbaa330d71436181c92c7418fe510c75 Author: tdreszer Date: Mon Aug 17 21:07:50 2009 +0000 Two protocols approved for Bernstein commit 786464efbabe2683ada31adb0b4e51df2c4bac7a Author: kate Date: Thu Aug 13 17:20:48 2009 +0000 Correct antibody name, by request of Rick Myers commit b187d5f78c48092f56e7f9a328a2996d4c810cd6 Author: braney Date: Tue Jul 21 21:22:01 2009 +0000 temporarily add U87 and BE2_C to get some HudonAlpha data loaded commit a9b4bfc810a6a19d494497c78fe0cccf6ce71d4c Author: braney Date: Fri Jul 17 22:55:20 2009 +0000 add some new antibodies from wiki: Oct-2 PU.1 Pbx p300 commit b54ad4e0e1cd923bc1f44aaa471cd73fca3d588f Author: braney Date: Mon Jul 6 21:45:29 2009 +0000 added new field restrictionEnzyme commit bb374fdcc6851e8ccc9f344a7f24610916709901 Author: tdreszer Date: Tue Jun 23 19:36:11 2009 +0000 Four more antibodies for Yale commit 4388b1bd75957d415c25d71cbc9826cf7264c940 Author: kate Date: Thu Jun 18 00:21:38 2009 +0000 Rename cell type for more specificity commit 5d5bb506e2948aef81ba0b6a5d610092b29f9a39 Author: tdreszer Date: Tue Jun 16 18:34:16 2009 +0000 Added 3 new tier 3s for Stam lab commit 35627dd7a4581afc9fb4ae606251d1173a8bfc94 Author: kate Date: Mon Jun 15 18:06:56 2009 +0000 expand description for NHEK commit ca513876a15f89f6c584bad85d385890d2888ce5 Author: kate Date: Mon Jun 15 17:56:02 2009 +0000 Lonza web site has changed commit a9b58fc92fd588ac6cf2cb46bd941ec2566d040a Author: tdreszer Date: Thu Jun 11 23:52:50 2009 +0000 Added E2F6 antibody for Yale commit 50413692d30fc781599c334a43700af3be5a884a Author: tdreszer Date: Thu Jun 11 21:20:59 2009 +0000 Added K562b and HepG2b alternate cell lines because Yale and UCDavis can't agree commit f236d1462fce78f2ba11a0875a7218575ea33659 Author: tdreszer Date: Mon Jun 8 18:55:21 2009 +0000 Fixed STAT1 url commit 854c1c0f7da8d09b1dbe131f43e337bba730ebee Author: tdreszer Date: Mon Jun 8 18:53:15 2009 +0000 Added STAT2 for Yale commit 5b7b5597a9e93655d8b7509732fc2e4674db4e3b Author: tdreszer Date: Mon Jun 8 18:21:13 2009 +0000 Added type treatment with 4 treatments for Yale commit f1101a93af71977512b979e58cb6eadfb093dd47 Author: tdreszer Date: Fri Jun 5 18:25:30 2009 +0000 Did I happen to mention how much I hate updating cv.ra? commit e17b75f88dca9a266d3ade54d64969f214719202 Author: tdreszer Date: Fri Jun 5 18:19:08 2009 +0000 Missing orderUrl's commit 71596a93c8796ebb373143d73b21188540e7f112 Author: tdreszer Date: Fri Jun 5 18:14:43 2009 +0000 Missing type commit aad9ba64a24a2e359eb5e47bd4047f40d29000d8 Author: tdreszer Date: Fri Jun 5 18:07:29 2009 +0000 Added a batch of cell lines commit 6d42e3e633cf9172640e0920935f5bcacc8e5e64 Author: tdreszer Date: Fri Jun 5 17:16:32 2009 +0000 Added a bunch of new antibodies commit ca7d9cf347affe22c473f39d3f119b6aa628a9db Author: mikep Date: Thu Jun 4 00:13:04 2009 +0000 url must be a url, move descriptoin to vendor name commit f1a9a8f0411ab7588dfa28d9d43512eb5144faa8 Author: tdreszer Date: Fri May 29 19:18:12 2009 +0000 One protocol had a broken link commit ef35d500b0e38f29a33917996175dd86ddf5f24c Author: tdreszer Date: Fri May 29 18:52:33 2009 +0000 Added some cell line protocols which had not been checked in before commit 2157df2155aa5395f8e22cf79b76589f553704d7 Author: tdreszer Date: Fri May 29 01:02:18 2009 +0000 Approved cell lines for Myers: BG02ES,H9ES, HAL, HFL11W and HFL24W commit 2b699ba3984f7766801fc5dc839247e6815ba242 Author: tdreszer Date: Sat May 23 16:42:32 2009 +0000 Fix misspelling - Thanks Angie commit 3564b589681f561195e425a0980ac26e2612fba8 Author: tdreszer Date: Thu May 21 01:02:04 2009 +0000 Misnamed a protocol commit b0eb2d6367b1bbf6e3940932c83fb50b941f7fd5 Author: tdreszer Date: Wed May 20 21:01:45 2009 +0000 Added approved protocols commit 8e9bd7ddc093dba5eaf93e77e40ad64bfbddefe5 Author: tdreszer Date: Fri May 15 18:23:25 2009 +0000 Sloppy typo commit c318871c266ea993eef4d5d1297c558999dd923d Author: tdreszer Date: Fri May 15 18:21:55 2009 +0000 Added E2F4 fro Yaale/UCD Farnham commit 5868a16371c1456b8ceecf8caa0b80e67578d297 Author: tdreszer Date: Sat May 2 19:30:55 2009 +0000 Added Rad21 and XRCC4 antibodies fro Yale commit 5afd4d867248b5864a808a8cecd46a7e4511daf9 Author: tdreszer Date: Sat May 2 19:07:00 2009 +0000 Added Pol3 for Yale commit 61e44ff60555215f91ab38015e2a6d3cc819c343 Author: tdreszer Date: Thu Apr 30 04:53:15 2009 +0000 Removed some cut and paste errors commit 7bfe1a6126549d2e11d33cdf9f6775f6f8c9cf19 Author: tdreszer Date: Wed Apr 29 22:03:10 2009 +0000 Added 8 cell lines for Stam lab commit 171432d3f4634baf0de6613417971ed2e1cf94fd Author: larrym Date: Mon Apr 27 20:25:52 2009 +0000 add colors commit ee1124e5f463067235ca0c518dba6eba3624d570 Author: tdreszer Date: Fri Apr 17 19:24:43 2009 +0000 HTC-116 was removed as this should be the already existing HCT-116 commit 1ab61d9f80a1136a6bccff0769efb480f7437d37 Author: kate Date: Thu Apr 16 17:24:06 2009 +0000 Fix syntax err commit 1593d9f9bf0d006dd4f2b5e348727063f2781a9b Author: kate Date: Thu Apr 16 15:21:51 2009 +0000 Add cell colors, loosely based on GNF conventions commit 611a422bd6c5f7a85aece109e97cebf7bc719945 Author: kate Date: Fri Mar 20 18:18:40 2009 +0000 Add longer ID string commit b3d2dcb44f7600a1a859b4243fe8e4710dbc02ec Author: kate Date: Fri Mar 20 18:18:19 2009 +0000 Add source control identifier string commit 12751690beb6b64a92cfee32b5a0c282eca241c5 Author: mikep Date: Fri Mar 6 00:14:06 2009 +0000 shorter codes commit 80114d9144156f46c3ba4163174b7c53062c2ad2 Author: tdreszer Date: Thu Mar 5 22:23:02 2009 +0000 Added rediculous variable freezeDate, rather than rewrite pipeline commit 9b9a177bc4811ff8d7c0f783ff9ad61bd1882349 Author: mikep Date: Thu Mar 5 20:33:25 2009 +0000 fixed typo commit a640fc0f876fef2eed696d51a86fec619e1a9cf4 Author: mikep Date: Thu Mar 5 20:18:21 2009 +0000 new variable readType for Caltech commit 7ebb2aa9256caad1be1fdf4b76cbcd3f4621f100 Author: mikep Date: Thu Mar 5 20:14:04 2009 +0000 removed some gnarly chars for javascript commit 97c9b8ea8b85f6dd95cff4f4b5c4d99189e15e11 Author: tdreszer Date: Tue Mar 3 18:41:15 2009 +0000 Clarified Large_Fragment description commit a3545a4cae13d057982e00289c0a0813d07cbbbf Author: tdreszer Date: Fri Feb 27 22:42:46 2009 +0000 Changed SREBP1 to SREBP1A as per Mike Willson's request commit f13fa4f51daac08b0da8e85a6cb4d6e28894ca98 Author: tdreszer Date: Fri Feb 27 19:36:54 2009 +0000 Added GATA-1, JunD, SREBP1 and SREBP2 antibodies commit dca71693236db56a677e115ea1d8a063f4e71642 Author: kate Date: Wed Feb 25 20:04:38 2009 +0000 Sanitize out slash from cell type name (w/ agreement of Peggy Farnham) commit dd41afb20504839cc0db38fd7416313cd1d28302 Author: tdreszer Date: Tue Feb 24 17:19:42 2009 +0000 Added TCF4 for Snyder's lab commit f8d8ddf944eef04e4b96563a7163fa131fce6332 Author: larrym Date: Wed Feb 18 07:51:33 2009 +0000 fix description for HAL commit d027b33c4a27d2f62bd79f0e663c39f56cc10a0f Author: larrym Date: Tue Feb 17 23:15:19 2009 +0000 add descriptions for terms recently added by HA commit 5ddeab667356d0cdf77ced3d14b34636c21fb01a Author: mikep Date: Sat Feb 14 00:35:21 2009 +0000 shortening names for sake of 64 char table name limit in mysql commit 55b44201a051140bdce65535d1b970cbd9bb246e Author: mikep Date: Fri Feb 13 23:35:05 2009 +0000 shortening for table name limit of 64 chars for Wold commit 27257cc3d5c7fcb43fa5f027b6daed7c4b1e8f06 Author: mikep Date: Fri Feb 13 17:28:58 2009 +0000 no algorithm applicable for some data like download only sequences commit bfdd55918e035d7d8f4578172af6dc720abeda3e Author: mikep Date: Thu Feb 12 22:22:21 2009 +0000 new tag map algorithms for Wold commit e746ad9d9b21fc13116578f8c23bbaa0538f7c1b Author: tdreszer Date: Wed Feb 11 16:38:51 2009 +0000 Added ZNF263 antibody for Yale. commit 18d5175758f16f743d80ec0f5209b5bf33c023f0 Author: larrym Date: Tue Feb 10 23:01:58 2009 +0000 new cell lines from Rami (they are not yet approved and we still need more details) commit db68c08a31b46e6ce88555549ea30389580d2f4b Author: mikep Date: Thu Feb 5 18:18:01 2009 +0000 new frag size for gPET (see GisDnaPet.daf) commit 2e9ada3b17cfe67b2e3d76784f6c53bbd7992a6e Author: kate Date: Fri Jan 30 20:05:12 2009 +0000 Correct spelling commit 505ffd7a3eb53372112aaa0de96376d956d11c18 Author: tdreszer Date: Wed Jan 28 19:00:24 2009 +0000 Added H1_ES human embryonic stem cells commit 802078e463764c8b23bb83d0b677e86d1a659786 Author: tdreszer Date: Tue Jan 27 21:16:47 2009 +0000 Added species dog commit 4f3c5a8959f5f49e328cf0d2ecc329dcbbbbdad1 Author: mikep Date: Tue Jan 27 15:47:37 2009 +0000 more accurate description commit cfbe2d00f2ec4904ee1f837c87cd4372880281f2 Author: tdreszer Date: Fri Jan 23 22:55:13 2009 +0000 Added species for Elnitski's Bi-direction promoter submissions commit 32f679d04f40898accf15f47e2519f9d2235580c Author: tdreszer Date: Tue Jan 20 20:21:26 2009 +0000 Fixed osteoblast order info and comment on no order info for Th1 commit 79fab5c7e116a8d1f7bd62a96516f622578bcff4 Author: tdreszer Date: Tue Jan 20 19:59:56 2009 +0000 Fixed HeLa-S3_IFNg termUrl commit 40ea778112828729dbf6b894d1c57ecead79609b Author: tdreszer Date: Tue Jan 20 19:53:19 2009 +0000 Fix K562 orderUrl commit 730ae8d2d47f016368962147df227bdf19d96598 Author: mikep Date: Tue Jan 20 18:46:14 2009 +0000 added new categories of short RNA commit 9f6d1378c6140e66a83baebdcf7921844fb48c43 Author: tdreszer Date: Fri Jan 16 20:21:06 2009 +0000 Added HEK293(b) for Yale (different protocol from Stam's HEK293 commit f7911a94baae05e98504ab71f591b115ade87785 Author: tdreszer Date: Fri Jan 9 23:53:24 2009 +0000 Fixed typo commit 054fab6c601b690c7a3671c5e7afbdeb676549aa Author: tdreszer Date: Fri Jan 9 23:31:47 2009 +0000 Added Reference_Genome for support tracks built on hg18 commit d519f392756747e76e8c2b3256d1bb4fbb34ddc9 Author: tdreszer Date: Fri Jan 9 21:11:16 2009 +0000 Added NF-E2 for Yale commit d51e3c02a4d68c87b91c160367b4c0d4e25d3474 Author: tdreszer Date: Fri Jan 9 18:54:01 2009 +0000 Added type control to handle growing number of control terms commit 2101381710da865811b25a3dcaac161535c2f1dc Author: tdreszer Date: Fri Jan 9 17:09:19 2009 +0000 Added Max antibody for Snyder commit 820bec52edc4b9042ccdcd01a4beb520cb88331f Author: tdreszer Date: Tue Jan 6 18:56:55 2009 +0000 Kate called me out on this quick little work around. Removing the temporary NHEK commit a93a045094028b6ff4dd829f9653e7521617393f Author: tdreszer Date: Tue Jan 6 01:14:56 2009 +0000 Temporarily add NHEK to allow Tarjei's submission of Keratinocytes to work commit 4e765c2619836bb0c0a50adf7abd7a4af4960174 Author: mikep Date: Wed Dec 17 15:49:03 2008 +0000 new localizations for Encode commit 0685aec0fd39bb6b761cc875174dd9937e6bda16 Author: mikep Date: Tue Dec 9 16:23:33 2008 +0000 additional vocab for Wold lab commit 8e737f584ed94d664e21c37bc990eaf8e48e2890 Author: mikep Date: Mon Dec 8 21:05:11 2008 +0000 fragSize for GIS DNA PET commit 55dce3a655f7c6dd487330df33de3bbcd156308e Author: tdreszer Date: Fri Dec 5 19:38:19 2008 +0000 Extended some antibody target descriptions commit 87e798e5bd1f08a3080f96ff9184b7af55c8a67e Author: mikep Date: Tue Dec 2 20:52:27 2008 +0000 renaming for better clarity commit 576e86df7a0590961e082820d9d198059c3ae4c8 Author: tdreszer Date: Mon Dec 1 22:48:35 2008 +0000 Lineage text should cite source commit a37585efbec6f96db7aab5f5c258d4f6bb794646 Author: mikep Date: Tue Nov 25 19:32:12 2008 +0000 standardized ripAntibody names commit c07db277d991f2696bf3c9d1a7e32d06dba6fa9b Author: mikep Date: Tue Nov 25 19:11:30 2008 +0000 standardized ripTgtProtein names commit 756399d3abf8f3b0661e617e159abae63ab3efca Author: mikep Date: Tue Nov 25 03:52:31 2008 +0000 Unfortunately does not look like you can have 2 terms of the same name even if their types are different commit 1f5897adea47151abc9e8d9306b8e8748e447739 Author: mikep Date: Tue Nov 25 03:32:49 2008 +0000 Tpyo in PA Binding Protein commit 5beddeda5181777aefb6fba4f2e86f5242fe4352 Author: mikep Date: Tue Nov 25 01:21:59 2008 +0000 target proteins for RIP-chip Tenenbaum project commit a5468b6d9aaa4b8c740f251be0fbb86a29c167bf Author: tdreszer Date: Tue Nov 25 00:42:36 2008 +0000 Additional information for several new cell lines commit ece5a8f23c9869f36b8d581118368547e6bcc365 Author: tdreszer Date: Mon Nov 24 20:00:57 2008 +0000 Added a bunch of tier 3 cell lines, but the protocols have yet to be approved. commit 9154f7d08fc0aae99e65b6d6cdb0e5cc484fd729 Author: tdreszer Date: Fri Nov 21 19:19:17 2008 +0000 Registered some antibodies commit 0c90179ee1a8bfd9a5cd40b9be284272c27599cc Author: mikep Date: Tue Nov 18 23:31:28 2008 +0000 added new RBP's commit 9c04b3874a200e90e8584abf778cd8b471f97a24 Author: mikep Date: Tue Nov 18 22:04:08 2008 +0000 new class of antibodies for RIP project commit f10f50857b3a0bc055361d5cd9e4644b26bb6daf Author: mikep Date: Mon Nov 17 18:40:42 2008 +0000 Whole cell short+long+polyA+/- for Affy RNA tiling array experiment commit 5fea57de5006fd94273e7c2fac0459ff1c87aaef Author: mikep Date: Fri Nov 14 23:52:38 2008 +0000 new cell lines from Stam lab, pending approval commit 0b50a2b9393e6af5cc72b106200111ab6d595d39 Author: mikep Date: Wed Nov 12 21:58:09 2008 +0000 typo on attatched commit 6b98b39e97e2bde1086382550d2d1b991d3de57a Author: mikep Date: Fri Nov 7 18:26:20 2008 +0000 singular form commit 46d0e3a939d6bd725d27c815bb2cadbe766e6053 Author: mikep Date: Tue Oct 21 18:23:40 2008 +0000 sanger variable is freeze date commit 3a20384b5e4f18b1db54bf180a51490ef214f60c Author: mikep Date: Tue Oct 7 14:41:35 2008 +0000 adding prostate cell line temporarily while we figure out what it should be for gingeras commit 8e7acae5fc8d5a732ada2498e53a08bbbfa4aeaa Author: kate Date: Wed Oct 1 19:54:47 2008 +0000 Add termUrl fields commit ed9e7947b03c68c60d5597d6df0ce57b51837fa4 Author: tdreszer Date: Sat Sep 27 00:00:13 2008 +0000 Restoring c-Myc, which I somehow shot myself in the foot with KDevelop and lost. commit e797ce9847a96fc3d56d0cc2444bac11fbb5ae0a Author: mikep Date: Thu Sep 25 00:38:10 2008 +0000 added term for whole-cell commit d0bf34d75fd2741e3e0b86033254a9022646db90 Author: tdreszer Date: Wed Sep 24 18:52:04 2008 +0000 Fixed HeLa-S2 name and added IFNg treatment for HeLa-S3 commit 86024721c1a69ed8623d443963bf295c81a3ecfb Author: tdreszer Date: Wed Sep 24 16:51:33 2008 +0000 Registered c-Myc from Vishy Iyer commit 1d7727d92fe59f52104013fcdbef68d429755197 Author: tdreszer Date: Tue Sep 23 21:18:18 2008 +0000 Added HCT-116 tier 3 cell line commit ad036cd40f0e9d1fe6540e24d883086ee5197776 Author: tdreszer Date: Thu Sep 18 22:29:46 2008 +0000 Added two promoters commit f7933ebbd686532f8bea68a8f299c8aa0eb303d8 Author: tdreszer Date: Mon Sep 15 17:20:18 2008 +0000 Added LNCaP newly approved teir 3 cell line commit c55655baadd35100d49e2231aa6ca2774ad181db Author: tdreszer Date: Mon Sep 8 17:36:55 2008 +0000 ra lib trips on commented-out cell line. Remove for now. commit fc7794ec08864cba82ea917b4314641227044d7b Author: tdreszer Date: Mon Sep 8 17:26:09 2008 +0000 Four more cell lines approved by Resources working group commit 5500ff308f6a01203666a38d7c9d42b0e5c22b28 Author: larrym Date: Thu Sep 4 18:54:55 2008 +0000 remove extra newline after comment (which screws up our ra parser) commit 926afb178844928321ef0a2f1a93a4552fe9af12 Author: larrym Date: Tue Sep 2 18:25:38 2008 +0000 add PSFK-1 and SK-N-MC (which are submitted and pending approval) commit 0f85861171a0a1f974f7571805f1c189a941b4b4 Author: tdreszer Date: Tue Aug 26 17:52:36 2008 +0000 Added newly approved teir 3 cell line GM18507 commit a2827f05d0b94259ac016c83cb32f0798e075b68 Author: tdreszer Date: Fri Aug 15 21:49:10 2008 +0000 Added NT2/D12 (Ntera2) cell line since Farnham's protocol was approved commit 4e14be831ef8041414f77536c2a58df8193567c9 Author: kate Date: Thu Aug 14 00:59:51 2008 +0000 Remove unregistered Tier 3 cell line commit 8a102c2e034242c4f17882f8566fd8a619c5d5e1 Author: mikep Date: Thu Jul 24 23:25:26 2008 +0000 added new controlled vocabulary types plus the cgi ra file viewer commit 4e06a9f30865080eb09944841dd38c2b0509bfed Author: larrym Date: Thu Jul 24 21:50:54 2008 +0000 remove some redundant lines commit 800c5eebbcd46c69947b76facaeb27f5fe054aee Author: kate Date: Wed Jul 23 18:10:30 2008 +0000 Another typo in field name commit b5a0434ee930a27f2f9714fb3a42ad1193b1680e Author: kate Date: Wed Jul 23 18:10:08 2008 +0000 Another typo in field name commit b887ac48153ff7899e84cde78f086aa256b778fa Author: kate Date: Wed Jul 23 18:07:03 2008 +0000 Correct bad field type commit 4d04b2c36cffe6ffc75835c9a1e576c5de96d6c5 Author: kate Date: Fri Jul 18 23:08:06 2008 +0000 Add new antibodies from Wiki commit f9f09427eb4a5c9179b42e40a344c29da3c0d3d6 Author: kate Date: Wed Jul 16 06:08:28 2008 +0000 Need to remove empty lines for ra lib commit 15a94534efc0db2baebb39d815a4979a6ce628d1 Author: kate Date: Wed Jul 16 00:05:04 2008 +0000 Add antibody section from wiki, expanded to include 'Target Description' commit cb74cf41222f596155155381be9dcbbf3468a240 Author: larrym Date: Thu Jun 26 21:09:24 2008 +0000 add FOXP2 and SK-N-MC commit 04539a8156bd124e55350245cfd799f2ccf8e8df Author: kate Date: Sat Jan 26 00:47:42 2008 +0000 Add gene types commit 07565449c10c88105c9e4fb4dce6deb3287a642f Author: kate Date: Tue Jan 15 19:11:26 2008 +0000 Metadata definition files