This track displays the trend p-values (-log10) of the seven diseases reported by The Wellcome Trust Case Control Consortium (see References section below). The diseases studied are:
Reported p-values were taken for each of the Illumina550 probes on the genome. For visualization purposes, these p-values were logged and negated.
Most of the data for chromosome X is omitted from this track because of the difference in statistical power and the difference in control sets used. The trend p-value captures the majority of the associated signals, therefore it was used to create this track instead of the genotypic p-value.
For the complete dataset, visit The Wellcome Trust Case Control Consortium Web Site.
When making use of these data, please cite:
The Wellcome Trust Case Control Consortium. Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. Nature. 2007 Jun 7;447(7145):661-78.