Description

This track shows depth sequencing coverage for the four HapMap populations in the ten ENCODE regions that have been resequenced for variation. The data for each population is shown in a separate subtrack:

• HapMap Allele Frequencies (CEU): Utah residents with ancestry from northern and western Europe
• HapMap Allele Frequencies (CHB): Han Chinese in Beijing, China
• HapMap Allele Frequencies (JPT): Japanese in Tokyo, Japan
• HapMap Allele Frequencies (YRI): Yoruba in Ibadan, Nigeria

The ENCODE regions targeted in this annotation include:

• ENr112 (chr2)
• ENr131 (chr2)
• ENr113 (chr4)
• ENm010 (chr7)
• ENm013 (chr7)
• ENm014 (chr7)
• ENr321 (chr8)
• ENr232 (chr9)
• ENr123 (chr12)
• ENr213 (chr18)

Display Conventions and Configuration

The subtracks within this annotation may be configured in a variety of ways to highlight different aspects of the displayed data. The graphical configuration options are shown at the top of the track description page, followed by a list of subtracks. To display only selected subtracks, uncheck the boxes next to the tracks you wish to hide. For more information about the graphical configuration options, click the Graph configuration help link.

Methods

Each data value represents the number of sequencing traces that covered the nucleotide. See the International HapMap Project website for information about how these data were collected and analyzed.

Credits

These data were obtained from HapMap public release 16c.1. Thanks to the International HapMap Project for making this information available.