Description

This track shows the draft assembly of the $organism genome. The assembly is 9.5X WGS coverage. The 10,292 supercontigs are displayed in the UCSC Genome browser as a single artifical chromosome chrUn with an artifical gap of 1,000 N's between supercontigs. The largest supercontig is 1,129,006, with 478 supercontigs larger than 93,185 bp (N50) containing over %50 of the sequence.

In dense mode, this track depicts the supercontigs. Supercontig boundaries are distinguished by the use of alternating gold and brown coloration. Arbitrary 1000 base gaps exist between the supercontigs, shown as spaces between the gold and brown blocks.

All components within this track are of fragment type "W": Whole Genome Shotgun contig.

Credits

The Jan. 2007 Caenorhabditis brenneri (aka: Caenorhabditis n. sp. 4. PB2801) draft assembly produced by Washington University School of Medicine GSC with the following data usage policy.

As described at WormBase: "This is a 20X inbred (one gravid female per generation) derivative of LKC28, which is conspecific with CB5161." Recently renamed to C. brenneri. Other conspecific strains: SB129, SB280. See also: Zootaxa 1456: 45-62 (25 Apr. 2007), Walter Sudhaus and Karin Kiontke.