Description

This track shows the draft assembly of the $organism genome. The genome has been sequenced to 8.92X coverage. There are 5,106 scaffolds comprising 169,747,139 bases, constructed from 18,752 contigs comprising 145,948,246 bases. The UCSC browser displays the 5,106 scaffolds as a single artifical chromosome chrUn of size 174,852,139 bases with an artifical gap of 1000 between each scaffold. The largest scaffold (Contig0) is 2,658,817 bases. One half of the sequence, 84,873,569 bases, is contained in 64 scaffolds, all at least 823,357 bases (N50).

In dense mode, this track depicts the supercontigs. Supercontig boundaries are distinguished by the use of alternating gold and brown coloration. Arbitrary 1000 base gaps exist between the supercontigs, shown as spaces between the gold and brown blocks.

All components within this track are of fragment type "W": Whole Genome Shotgun contig.

Credits

The Jan. 2007 Pristionchus pacificus (5.0) draft assembly was produced by the Washington University School of Medicine GSC with the following data use policy.