This track shows the location of both the consensus sequences and target sequences used for the selection of probes on the Affymetrix Zebrafish genome chip.
This track follows the display conventions for composite tracks. To display only selected subtracks, uncheck the boxes next to the tracks you wish to hide.
Consensus and target sequences were downloaded from the
Affymetrix Product Support web page.
The sequences were mapped to the genome with blat followed by pslCDnaFilter
using the following parameters:
-localNearBest=0.005, -minQSize=20,
-minNonRepSize=16, -ignoreNs, -bestOverlap,
-minId=0.95 and -minCover=0.15
Thanks to Affymetrix for the data underlying this track.