=head1 NAME Bio::DB::GFF::Aggregator::ucsc_refgene -- UCSC refGene aggregator =head1 SYNOPSIS use Bio::DB::GFF; # Open the sequence database my $db = Bio::DB::GFF->new( -adaptor => 'dbi:mysql', -dsn => 'dbi:mysql:elegans42', -aggregator => ['transcript','clone'], ); ------------------------------------------------- Aggregator method: refgene Main method: transcript Sub methods: refGene ------------------------------------------------- =head1 DESCRIPTION L =cut package Bio::DB::GFF::Aggregator::ucsc_refgene; use strict; use base qw(Bio::DB::GFF::Aggregator); =head2 method Title : method Usage : $aggregator->method Function: return the method for the composite object Returns : the string "refgene" Args : none Status : Public =cut sub method { 'refgene' } =head2 part_names Title : part_names Usage : $aggregator->part_names Function: return the methods for the sub-parts Returns : empty list Args : none Status : Public =cut sub part_names { return (); } =head2 main_name Title : main_name Usage : $aggregator->main_name Function: return the method for the main component Returns : the string "transcript:refGene" Args : none Status : Public =cut sub main_name { return 'transcript:refGene'; } 1; __END__ =head1 BUGS None reported. =head1 SEE ALSO L, L =head1 AUTHOR Allen Day Eallenday@ucla.eduE. Copyright (c) 2002 Allen Day, University of California, Los Angeles. This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself. =cut