=head1 LICENSE Copyright (c) 1999-2013 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. For license details, please see http://www.ensembl.org/info/about/code_licence.html =head1 CONTACT Please email comments or questions to the public Ensembl developers list at . Questions may also be sent to the Ensembl help desk at . =cut =head1 NAME Bio::EnsEMBL::DBSQL::SOTermAdaptor =head1 DESCRIPTION A specialization of Bio::EnsEMBL::DBSQL::OntologyTermAdaptor, specifically for Sequence ontology (SO) terms. See the documentation of Bio::EnsEMBL::DBSQL::OntologyTermAdaptor for further information. =head1 METHODS =cut package Bio::EnsEMBL::DBSQL::SOTermAdaptor; use strict; use warnings; use base qw( Bio::EnsEMBL::DBSQL::OntologyTermAdaptor ); =head2 new Arg [1] : Bio::EnsEMBL::DBSQL::DBAdaptor Argument required for parent class Bio::EnsEMBL::DBSQL::BaseAdaptor. Description : Creates an ontology term adaptor for SO terms. Example : my $go_adaptor = Bio::EnsEMBL::DBSQL::SOTermAdaptor->new( $dba ); Return type : Bio::EnsEMBL::DBSQL::SOTermAdaptor =cut sub new { my ( $proto, $dba ) = @_; my $this = $proto->SUPER::new( $dba, 'SO' ); return $this; } 1;