gatk -baq CALCULATE_AS_NECESSARY -T UnifiedGenotyper -R ./NCBIM37_um.fa -o ./raw/snps.raw.chr10.vcf -stand_call_conf 30 -stand_emit_conf 10.0 -I /data/mus/bams/wild/wildmus101_A.bam -I /data/mus/bams/wild/wildmus303_A.bam -I /data/mus/bams/wild/wildmus34_A.bam -I /data/mus/bams/wild/wildmus231_A.bam -I /data/mus/bams/wild/wildmus327_A.bam -I /data/mus/bams/wild/wildmus310_A.bam -I /data/mus/bams/wild/wildmus234_A.bam -I /data/mus/bams/wild/wildmus329_A.bam -I /data/mus/bams/wild/wildmus211_A.bam -I /data/mus/bams/wild/wildmus311_A.bam -I /data/mus/bams/wild/wildmus236_A.bam -I /data/mus/bams/wild/wildmus330_A.bam -I /data/mus/bams/wild/wildmus218_A.bam -I /data/mus/bams/wild/wildmus313_A.bam -I /data/mus/bams/wild/wildmus246_A.bam -I /data/mus/bams/wild/wildmus334_A.bam -I /data/mus/bams/wild/wildmus54_A.bam -I /data/mus/bams/wild/wildmus227_A.bam -I /data/mus/bams/wild/wildmus314_A.bam -I /data/mus/bams/wild/wildmus44_A.bam -L 10 > out10 &