Index of /mus/cisortho/src

	Name	Last modified	Size	Description
	Parent Directory		-
	Makefile	2011-02-02 13:48	22K
	Makefile.am	2011-02-01 13:31	2.2K
	Makefile.in	2011-02-02 13:42	24K
	associate_regions	2011-02-02 13:44	128K
	associate_regions.cc	2011-02-01 13:31	4.6K
	associate_regions.o	2011-02-02 13:44	31K
	background_estimatio..>	2011-02-01 13:31	639
	cisortho.cc	2011-02-01 13:31	10K
	cisortho_funcs.cc	2011-02-01 13:31	4.4K
	cisortho_funcs.h	2011-02-01 13:31	1.0K
	cluster.cc	2011-02-01 13:31	2.6K
	cluster.h	2011-02-01 13:31	493
	cluster.o	2011-02-02 13:48	27K
	cluster_base.cc	2011-02-01 13:31	2.7K
	cluster_base.h	2011-02-01 13:31	1.6K
	cluster_base.o	2011-02-02 13:48	20K
	collection.cc	2011-02-01 13:31	3.2K
	collection.h	2011-02-01 13:31	1.2K
	collection.o	2011-02-02 13:48	49K
	consensus.h	2011-02-01 13:31	1.1K
	conservation.cc	2011-02-01 13:31	19K
	conservation.h	2011-02-01 13:31	2.3K
	conservation.txt	2011-02-01 13:31	4.7K
	display_trie	2011-02-02 13:44	113K
	display_trie.cc	2011-02-01 13:31	6.3K
	display_trie.o	2011-02-02 13:44	39K
	diversity_cluster.cc	2011-02-01 13:31	2.7K
	diversity_cluster.h	2011-02-01 13:31	1.6K
	diversity_cluster.o	2011-02-02 13:48	31K
	dna.cc	2011-02-01 13:31	7.0K
	dna.h	2011-02-01 13:31	2.9K
	dna.o	2011-02-02 13:44	63K
	dna_scanning.cc	2011-02-01 13:31	2.5K
	dna_scanning.h	2011-02-01 13:31	466
	dna_scanning.o	2011-02-02 13:44	13K
	dna_types.h	2011-02-01 13:31	1.1K
	dnacol.cc	2011-02-01 13:31	3.9K
	dnacol.h	2011-02-01 13:31	1.6K
	dnacol.o	2011-02-02 13:44	33K
	dnastats.cc	2011-02-01 13:31	1.5K
	dnastats.h	2011-02-01 13:31	282
	dnastats.o	2011-02-02 13:44	18K
	enum.cc	2011-02-01 13:31	2.3K
	enum.h	2011-02-01 13:31	588
	enum.o	2011-02-02 13:44	3.7K
	fasta2cisfasta	2011-02-02 13:48	8.5K
	fasta2cisfasta.cc	2011-02-01 13:31	437
	fasta2cisfasta.o	2011-02-02 13:48	2.1K
	filter_maq_pileup	2011-02-02 13:48	8.7K
	filter_maq_pileup.cc	2011-02-01 13:31	1.7K
	filter_maq_pileup.o	2011-02-02 13:48	3.2K
	filter_matching_lines	2011-02-02 13:48	24K
	filter_matching_line..>	2011-02-01 13:31	5.0K
	filter_matching_lines.o	2011-02-02 13:48	6.8K
	fold.h	2011-02-01 13:31	2.5K
	genome_index	2011-02-02 13:44	151K
	genome_index.cc	2011-02-01 13:31	11K
	genome_index.o	2011-02-02 13:44	14K
	get_uncovered_regions	2011-02-02 13:48	8.6K
	get_uncovered_region..>	2011-02-01 13:31	1.3K
	get_uncovered_regions.o	2011-02-02 13:48	2.4K
	getdna_simple	2011-02-02 13:48	103K
	getdna_simple.cc	2011-02-01 13:31	4.3K
	getdna_simple.o	2011-02-02 13:48	31K
	hit.cc	2011-02-01 13:31	3.5K
	hit.h	2011-02-01 13:31	2.4K
	hit.o	2011-02-02 13:44	32K
	icisj	2011-02-02 13:48	241K
	icisj.cc	2011-02-01 13:31	18K
	icisj.cpp.post	2011-02-01 13:31	14K
	icisj.o	2011-02-02 13:48	18K
	index_trie.cc	2011-02-01 13:31	21K
	index_trie.h	2011-02-01 13:31	2.7K
	index_trie.o	2011-02-02 13:44	66K
	index_trie_scan.cc	2011-02-01 13:31	2.9K
	index_trie_scan.h	2011-02-01 13:31	10K
	index_trie_scan.o	2011-02-02 13:44	23K
	input_grammar.hpp	2011-02-01 13:31	11K
	interspersed_regions	2011-02-02 13:48	104K
	interspersed_regions.cc	2011-02-01 13:31	6.4K
	interspersed_regions.o	2011-02-02 13:48	13K
	json.h	2011-02-01 13:31	111
	litestream.cc	2011-02-01 13:31	5.6K
	litestream.h	2011-02-01 13:31	2.3K
	litestream.o	2011-02-02 13:44	4.2K
	make_dnas_file	2011-02-02 13:48	79K
	make_dnas_file.cc	2011-02-01 13:31	2.8K
	make_dnas_file.o	2011-02-02 13:48	28K
	mapping.h	2011-02-01 13:31	4.8K
	match_trie.h	2011-02-01 13:31	2.8K
	memory.h	2011-02-01 13:31	1.6K
	min_score_diversity_..>	2011-02-01 13:31	532
	misc.cc	2011-02-01 13:31	513
	misc.h	2011-02-01 13:31	225
	misc.o	2011-02-02 13:44	8.4K
	module.cc	2011-02-01 13:31	1.9K
	module.h	2011-02-01 13:31	1.8K
	module.txt	2011-02-01 13:31	7.9K
	mstream.h	2011-02-01 13:31	16K
	mstream.tcc	2011-02-01 13:31	3.6K
	nested.cc	2011-02-01 13:31	9.0K
	nested.h	2011-02-01 13:31	2.9K
	nested.o	2011-02-02 13:44	27K
	nuctrie.h	2011-02-01 13:31	2.5K
	oldcode2	2011-02-01 13:31	40K
	parse_example.h	2011-02-01 13:31	1.1K
	parse_funcs.hpp	2011-02-01 13:31	9.7K
	pattern.cc	2011-02-01 13:31	3.4K
	pattern.h	2011-02-01 13:31	1.0K
	pattern.o	2011-02-02 13:48	20K
	permutation_collecti..>	2011-02-01 13:31	784
	permutation_collecti..>	2011-02-01 13:31	1.3K
	pileup_histogram	2011-02-02 13:48	8.6K
	pileup_histogram.cc	2011-02-01 13:31	525
	pileup_histogram.o	2011-02-02 13:48	2.2K
	pwm.cc	2011-02-01 13:31	5.6K
	pwm.h	2011-02-01 13:31	3.0K
	pwm.o	2011-02-02 13:48	46K
	qseq2fastq.cc	2011-02-01 13:31	743
	region.cc	2011-02-01 13:31	12K
	region.h	2011-02-01 13:31	4.9K
	region.o	2011-02-02 13:44	54K
	region_association.cc	2011-02-01 13:31	6.1K
	region_association.h	2011-02-01 13:31	580
	region_association.o	2011-02-02 13:44	21K
	region_types.h	2011-02-01 13:31	300
	regulon.cc	2011-02-01 13:31	1.4K
	regulon.h	2011-02-01 13:31	1.3K
	regulon.txt	2011-02-01 13:31	2.7K
	scoring.h	2011-02-01 13:31	3.7K
	search.cc	2011-02-01 13:31	5.3K
	search.h	2011-02-01 13:31	1.1K
	search.o	2011-02-02 13:48	64K
	specific_cluster.h	2011-02-01 13:31	266
	string_tools.cc	2011-02-01 13:31	2.1K
	string_tools.h	2011-02-01 13:31	597
	string_tools.o	2011-02-02 13:44	16K
	test	2011-02-01 13:31	0