"""Unsupervised nearest neighbors learner""" from .base import NeighborsBase from .base import KNeighborsMixin from .base import RadiusNeighborsMixin from .base import UnsupervisedMixin class NearestNeighbors(NeighborsBase, KNeighborsMixin, RadiusNeighborsMixin, UnsupervisedMixin): """Unsupervised learner for implementing neighbor searches. Parameters ---------- n_neighbors : int, optional (default = 5) Number of neighbors to use by default for :meth:`k_neighbors` queries. radius : float, optional (default = 1.0) Range of parameter space to use by default for :meth`radius_neighbors` queries. algorithm : {'auto', 'ball_tree', 'kd_tree', 'brute'}, optional Algorithm used to compute the nearest neighbors: - 'ball_tree' will use :class:`BallTree` - 'kd_tree' will use :class:`scipy.spatial.cKDtree` - 'brute' will use a brute-force search. - 'auto' will attempt to decide the most appropriate algorithm based on the values passed to :meth:`fit` method. Note: fitting on sparse input will override the setting of this parameter, using brute force. leaf_size : int, optional (default = 30) Leaf size passed to BallTree or cKDTree. This can affect the speed of the construction and query, as well as the memory required to store the tree. The optimal value depends on the nature of the problem. warn_on_equidistant : boolean, optional. Defaults to True. Generate a warning if equidistant neighbors are discarded. For classification or regression based on k-neighbors, if neighbor k and neighbor k+1 have identical distances but different labels, then the result will be dependent on the ordering of the training data. If the fit method is ``'kd_tree'``, no warnings will be generated. p: integer, optional (default = 2) Parameter for the Minkowski metric from sklearn.metrics.pairwise.pairwise_distances. When p = 1, this is equivalent to using manhattan_distance (l1), and euclidean_distance (l2) for p = 2. For arbitrary p, minkowski_distance (l_p) is used. Examples -------- >>> from sklearn.neighbors import NearestNeighbors >>> samples = [[0, 0, 2], [1, 0, 0], [0, 0, 1]] >>> neigh = NearestNeighbors(2, 0.4) >>> neigh.fit(samples) #doctest: +ELLIPSIS NearestNeighbors(...) >>> neigh.kneighbors([[0, 0, 1.3]], 2, return_distance=False) ... #doctest: +ELLIPSIS array([[2, 0]]...) >>> neigh.radius_neighbors([0, 0, 1.3], 0.4, return_distance=False) array([[2]]) See also -------- KNeighborsClassifier RadiusNeighborsClassifier KNeighborsRegressor RadiusNeighborsRegressor BallTree Notes ----- See :ref:`Nearest Neighbors ` in the online documentation for a discussion of the choice of ``algorithm`` and ``leaf_size``. http://en.wikipedia.org/wiki/K-nearest_neighbor_algorithm """ def __init__(self, n_neighbors=5, radius=1.0, algorithm='auto', leaf_size=30, warn_on_equidistant=True, p=2): self._init_params(n_neighbors=n_neighbors, radius=radius, algorithm=algorithm, leaf_size=leaf_size, warn_on_equidistant=warn_on_equidistant, p=p)