id mutant_strain dna start length reference_base sample_base consensus_score loci_multiplicity mapping_quality neighbor_quality number_wildtype_reads number_variant_reads sequencing_depth sample_reads variant_type indel_size class description parent_features 1 CB6648_redo I 200948 1 A T 255 1.00 63 62 0 26 26 @ttttttttttTtTtTTTtTTtTTttt point 0 SNP none haw293 2 CB6648_redo I 200949 1 C T 255 1.00 63 62 0 27 27 @ttttttttttTtTtTTTtTTtTTtttt point 0 SNP none haw294 14 CB6648_redo I 316117 1 T G 235 1.00 63 62 0 16 16 @GGGGGGGGGGGGGGGG point 0 SNP none haw435,uCE1-530 21 CB6648_redo I 361325 1 C A 255 1.00 63 62 0 32 32 @AAAaAaaaAAaaAaAAAAaAaaAAaaaaaaAA point 0 missense AAG->AAT[Lys->Asn] R119.1 22 CB6648_redo I 369897 1 T C 255 1.19 63 62 0 25 25 @ccccccccccccCcCccCCCCcCcc point 0 nongenic 1525 into R119.2 160775 CB6648_redo I 670389 105 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3923 to 4028 bp into Y18H1A.14 33 CB6648_redo I 742850 1 T C 84 1.00 63 6 2 3 5 @CCc.. point 0 silent GAA->GAG[Glu->Glu] Y18H1A.13 40 CB6648_redo I 808102 1 C T 255 1.00 63 62 0 31 31 @TttTTtTtTtttTTTTtTTTtTtTttttTtt point 0 nongenic -29895 upstream ZC123.1 40 CB6648_redo I 808102 1 C T 255 1.00 63 62 0 31 31 @TttTTtTtTtttTTTTtTTTtTtTttttTtt point 0 nongenic 4733 into ZC123.3 41 CB6648_redo I 852015 1 T C 8 1.00 63 62 3 4 7 @.CC.CC. point 0 nongenic -1445 upstream Y95B8A.8 41 CB6648_redo I 852015 1 T C 8 1.00 63 62 3 4 7 @.CC.CC. point 0 nongenic -5249 upstream ZC123.4a,ZC123.4b,ZC123.4c 46 CB6648_redo I 964212 1 C T 255 1.00 63 62 0 23 23 @TTtttTttTTTttTttTttTtTT point 0 nongenic -6836 upstream Y34D9B.1a 46 CB6648_redo I 964212 1 C T 255 1.00 63 62 0 23 23 @TTtttTttTTTttTttTttTtTT point 0 nongenic 511 into F54A5.2 47 CB6648_redo I 968802 1 G C 255 1.00 63 62 0 25 25 @CCcCCCcCcCCCCCCCCcCcCCCCc point 0 nongenic -11426 upstream Y34D9B.1a 47 CB6648_redo I 968802 1 G C 255 1.00 63 62 0 25 25 @CCcCCCcCcCCCCCCCCcCcCCCCc point 0 nongenic 627 into F54A5.2 47 CB6648_redo I 968802 1 G C 255 1.00 63 62 0 25 25 @CCcCCCcCcCCCCCCCCcCcCCCCc point 0 nongenic 879 downstream F54A5.3a 47 CB6648_redo I 968802 1 G C 255 1.00 63 62 0 25 25 @CCcCCCcCcCCCCCCCCcCcCCCCc point 0 nongenic 906 downstream F54A5.3d 49 CB6648_redo I 995392 1 C T 255 1.00 63 62 0 28 28 @TttTtttttTTtttTTTtTttTtttttt point 0 nongenic -654 upstream C54G6.3 58 CB6648_redo I 1142103 1 C A 255 1.00 63 62 0 30 30 @AaaAaAAaAAaaaAaAAaAaAaaAaAaaAA point 0 missense GGT->TGT[Gly->Cys] Y48G8AL.10 58 CB6648_redo I 1142103 1 C A 255 1.00 63 62 0 30 30 @AaaAaAAaAAaaaAaAAaAaAaaAaAaaAA point 0 SNP none haw1570 66 CB6648_redo I 1250355 1 C T 255 1.06 63 62 0 28 28 @TTttTTttttTtttTTTttttTtTTttT point 0 nongenic -21071 upstream Y48G8AL.13.2 66 CB6648_redo I 1250355 1 C T 255 1.06 63 62 0 28 28 @TTttTTttttTtttTTTttttTtTTttT point 0 nongenic -4415 upstream Y48G8AL.15 66 CB6648_redo I 1250355 1 C T 255 1.06 63 62 0 28 28 @TTttTTttttTtttTTTttttTtTTttT point 0 nongenic 4312 into Y48G8AL.1 67 CB6648_redo I 1252577 1 C T 255 2.81 63 62 0 32 32 @TTTtTtTtTTTTTTtTtTtTttTTtTtTtTTT point 0 nongenic -2193 upstream Y48G8AL.15 67 CB6648_redo I 1252577 1 C T 255 2.81 63 62 0 32 32 @TTTtTtTtTTTTTTtTtTtTttTTtTtTtTTT point 0 nongenic -23293 upstream Y48G8AL.13.2 67 CB6648_redo I 1252577 1 C T 255 2.81 63 62 0 32 32 @TTTtTtTtTTTTTTtTtTtTttTTtTtTtTTT point 0 nongenic 2090 into Y48G8AL.1 68 CB6648_redo I 1295413 1 C T 255 1.00 63 62 0 23 23 @TTttTTttTTtTTTTTTTTTTTT point 0 nongenic -10162 upstream K12C11.4 69 CB6648_redo I 1302563 1 G T 255 1.62 63 62 1 13 14 @,TttTTTTttTtTt point 0 nongenic -3012 upstream K12C11.4 88 CB6648_redo I 1376716 1 T G 10 6.75 63 62 5 5 10 @.,,..gGGGG point 0 nongenic 226 downstream Y92H12BL.4 114 CB6648_redo I 1416689 1 C A 255 1.00 63 62 0 42 42 @aaaaaaAaAaAAAAAAAAaaAaaaAAAAaaaAAAaAAaaAaA point 0 missense ACC->AAC[Thr->Asn] Y92H12BR.3a,Y92H12BR.3b 160776 CB6648_redo I 1440206 53 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3926 to 3979 bp into Y92H12BR.8 122 CB6648_redo I 1638756 1 C T 255 1.00 63 62 0 36 36 @TTtTTttTTttTttttTttttTtTTTtttTTTTTat point 0 missense CCG->TCG[Pro->Ser] Y73E7A.8 123 CB6648_redo I 1648904 1 C T 255 1.00 63 62 0 30 30 @ttTtttTTtTttttttttttttttttTttt point 0 nongenic 239 downstream Y71G12B.20b 123 CB6648_redo I 1648904 1 C T 255 1.00 63 62 0 30 30 @ttTtttTTtTttttttttttttttttTttt point 0 nongenic 2476 into Y71G12B.20a 126 CB6648_redo I 1699307 1 C T 255 6.62 63 62 0 27 27 @TttttttttttttttTttttTtttttt point 0 nongenic -2051 upstream Y71G12B.14 126 CB6648_redo I 1699307 1 C T 255 6.62 63 62 0 27 27 @TttttttttttttttTttttTtttttt point 0 nongenic -7694 upstream Y71G12B.31 126 CB6648_redo I 1699307 1 C T 255 6.62 63 62 0 27 27 @TttttttttttttttTttttTtttttt point 0 nongenic 1213 into Y71G12B.15.1 126 CB6648_redo I 1699307 1 C T 255 6.62 63 62 0 27 27 @TttttttttttttttTttttTtttttt point 0 nongenic 958 into Y71G12B.15.2 127 CB6648_redo I 1740504 1 C T 255 1.00 63 62 0 14 14 @TTTtttTttTtTtt point 0 three_prime_UTR none Y71G12B.11a 128 CB6648_redo I 1814653 1 G A 255 3.25 63 62 0 24 24 @AAAaAaAAAAaaaAaaAAAaAaAA point 0 nongenic -1497 upstream Y71G12B.2 128 CB6648_redo I 1814653 1 G A 255 3.25 63 62 0 24 24 @AAAaAaAAAAaaaAaaAAAaAaAA point 0 nongenic 551 into Y71G12B.32 129 CB6648_redo I 1864004 1 T C 255 1.19 63 62 0 20 20 @cccccCCccCCccccCcccC point 0 SNP none haw2851 130 CB6648_redo I 1866020 1 G A 255 1.00 63 62 0 41 41 @AaAaAAAAAAaAAAAaaaAAaaaaAaaAaAAAaAAAAaaAa point 0 nongenic -5440 upstream M01D7.1 130 CB6648_redo I 1866020 1 G A 255 1.00 63 62 0 41 41 @AaAaAAAAAAaAAAAaaaAAaaaaAaaAaAAAaAAAAaaAa point 0 nongenic -8127 upstream Y71G12A.3 130 CB6648_redo I 1866020 1 G A 255 1.00 63 62 0 41 41 @AaAaAAAAAAaAAAAaaaAAaaaaAaaAaAAAaAAAAaaAa point 0 nongenic 3408 into M01D7.2 131 CB6648_redo I 1902592 1 G A 255 1.00 63 62 0 49 49 @aAaaaaAAAaAAAAAAaaaaaaAAAaAaAAaAAaAaaAaAAaaAAaaaa point 0 missense GAT->AAT[Asp->Asn] Y71G12A.2a,Y71G12A.2b 132 CB6648_redo I 2033983 1 A G 253 1.00 63 62 4 13 17 @g.,G,,gGGgGGgGGGG point 0 nongenic 32 downstream Y20F4.2 132 CB6648_redo I 2033983 1 A G 253 1.00 63 62 4 13 17 @g.,G,,gGGgGGgGGGG point 0 nongenic 401 downstream Y20F4.4 133 CB6648_redo I 2033985 1 G A 255 1.00 63 62 2 18 20 @a.,AAAaAAaAAaAAAAAaa point 0 nongenic 34 downstream Y20F4.2 133 CB6648_redo I 2033985 1 G A 255 1.00 63 62 2 18 20 @a.,AAAaAAaAAaAAAAAaa point 0 nongenic 399 downstream Y20F4.4 135 CB6648_redo I 2379643 1 C T 255 1.00 63 62 0 12 12 @tTTTtTttTTtt point 0 missense ATG->ATA[Met->Ile] Y39G10AR.17 135 CB6648_redo I 2379643 1 C T 255 1.00 63 62 0 12 12 @tTTTtTttTTtt point 0 SNP none snp_Y39G10AR[4] 137 CB6648_redo I 2554858 1 T G 5 5.31 63 0 1 5 6 @GGGgg. point 0 nongenic -3266 upstream Y23H5B.9 137 CB6648_redo I 2554858 1 T G 5 5.31 63 0 1 5 6 @GGGgg. point 0 nongenic -3442 upstream C55C2.4 137 CB6648_redo I 2554858 1 T G 5 5.31 63 0 1 5 6 @GGGgg. point 0 nongenic 1764 into Y23H5B.1 139 CB6648_redo I 2554864 1 C G 3 3.00 63 0 1 4 5 @,gggg point 0 nongenic -3272 upstream Y23H5B.9 139 CB6648_redo I 2554864 1 C G 3 3.00 63 0 1 4 5 @,gggg point 0 nongenic -3436 upstream C55C2.4 139 CB6648_redo I 2554864 1 C G 3 3.00 63 0 1 4 5 @,gggg point 0 nongenic 1770 into Y23H5B.1 140 CB6648_redo I 2568367 1 C T 255 1.00 63 62 0 32 32 @TTtTtttTtTtTTttTTtTTtTttttTttTTt point 0 nongenic -393 upstream C55C2.1 141 CB6648_redo I 2568368 1 G A 255 1.00 63 62 0 33 33 @AAaAaaaAaAaAAaaAAaAAaAaaaaAaaAAaa point 0 nongenic -392 upstream C55C2.1 142 CB6648_redo I 2579329 1 A T 255 1.00 63 62 0 45 45 @TTtTTtTtTttttTTttttttTTttTtttTtTTtttTtttTtTTt point 0 nongenic -3307 upstream C55C2.5a,C55C2.5b,C55C2.5c 143 CB6648_redo I 2652465 1 A G 46 2.62 63 62 2 4 6 @..GGGG point 0 nongenic -15695 upstream F32B5.6d.1 143 CB6648_redo I 2652465 1 A G 46 2.62 63 62 2 4 6 @..GGGG point 0 nongenic -752 upstream F40E3.6 143 CB6648_redo I 2652465 1 A G 46 2.62 63 62 2 4 6 @..GGGG point 0 nongenic 4770 into F40E3.5.1 143 CB6648_redo I 2652465 1 A G 46 2.62 63 62 2 4 6 @..GGGG point 0 nongenic 4778 into F40E3.5.2 144 CB6648_redo I 2710697 1 T C 255 1.00 63 62 0 45 45 @cCCCCCCcCccCcCCCCccccCCCccCcCCCCCCCCCCCCCccCc point 0 SNP none haw4255 145 CB6648_redo I 2777373 1 C G 255 1.00 63 62 0 16 16 @GGGGGgGGGgGGGggG point 0 five_prime_UTR none Y71F9B.13c 145 CB6648_redo I 2777373 1 C G 255 1.00 63 62 0 16 16 @GGGGGgGGGgGGGggG point 0 silent GCG->GCC[Ala->Ala] Y71F9B.13a,Y71F9B.13b 146 CB6648_redo I 2889894 1 A G 255 1.00 63 62 0 29 29 @gggggGGGgggGggGGggggggGgggggg point 0 nongenic -552 upstream Y71F9AL.6 146 CB6648_redo I 2889894 1 A G 255 1.00 63 62 0 29 29 @gggggGGGgggGggGGggggggGgggggg point 0 nongenic 3826 into Y71F9AL.16 146 CB6648_redo I 2889894 1 A G 255 1.00 63 62 0 29 29 @gggggGGGgggGggGGggggggGgggggg point 0 nongenic 458 downstream Y71F9AL.7 147 CB6648_redo I 3059396 1 C T 255 1.00 63 62 0 19 19 @TtttttttTtTTtTtTtTt point 0 missense CCC->TCC[Pro->Ser] Y54E10BR.1 152 CB6648_redo I 3264208 1 C T 255 1.00 63 62 0 48 48 @TtTTTttTtTTTtttTTttTtTTtTTtttTTttTttTTtttTTttttt point 0 nongenic 51 downstream Y44E3B.1c 152 CB6648_redo I 3264208 1 C T 255 1.00 63 62 0 48 48 @TtTTTttTtTTTtttTTttTtTTtTTtttTTttTttTTtttTTttttt point 0 nongenic 78 downstream Y44E3B.1b.1,Y44E3B.1b.2 152 CB6648_redo I 3264208 1 C T 255 1.00 63 62 0 48 48 @TtTTTttTtTTTtttTTttTtTTtTTtttTTttTttTTtttTTttttt point 0 nongenic 96 downstream Y44E3B.2 153 CB6648_redo I 3275605 1 C T 255 1.00 63 62 0 32 32 @ttttttTtTTTtttttTtTtttTTTtTttTtt point 0 nongenic -11777 upstream W01B11.2 153 CB6648_redo I 3275605 1 C T 255 1.00 63 62 0 32 32 @ttttttTtTTTtttttTtTtttTTTtTttTtt point 0 nongenic 2052 into W01B11.5a 153 CB6648_redo I 3275605 1 C T 255 1.00 63 62 0 32 32 @ttttttTtTTTtttttTtTtttTTTtTttTtt point 0 nongenic 5280 into W01B11.5b 154 CB6648_redo I 3460767 1 C T 255 1.00 63 62 0 30 30 @ttTttTTttTTTtTTttTttTtTTtTtTTT point 0 missense ACA->ATA[Thr->Ile] Y47G6A.11 158 CB6648_redo I 3576289 1 C T 255 1.00 63 62 0 39 39 @TtttTTttTTTTtTtTTTtTTtttTTTTTtttTTttTTt point 0 missense CGT->CAT[Arg->His] Y47G6A.23 161 CB6648_redo I 3885008 1 A G 255 1.00 63 62 0 29 29 @GgggggggGGGggggGgGGGGGGGgGGGG point 0 SNP none haw5911 162 CB6648_redo I 3885020 1 A G 255 1.00 63 62 0 28 28 @gGGGggggGgGGGGGGGgGGGGGgGGgg point 0 SNP none haw5912 163 CB6648_redo I 3935098 1 T C 255 1.19 63 62 0 27 27 @cCcCcCCCcCCCCcccCCCCccCcCcC point 0 nongenic 184 downstream T21E3.3 163 CB6648_redo I 3935098 1 T C 255 1.19 63 62 0 27 27 @cCcCcCCCcCCCCcccCCCCccCcCcC point 0 nongenic 305 downstream T21E3.1 164 CB6648_redo I 3935121 1 A C 255 1.62 63 62 0 19 19 @cCCCCccCcCcCcCcCCCC point 0 nongenic 161 downstream T21E3.3 164 CB6648_redo I 3935121 1 A C 255 1.62 63 62 0 19 19 @cCCCCccCcCcCcCcCCCC point 0 nongenic 328 downstream T21E3.1 165 CB6648_redo I 3935148 1 G C 255 1.56 63 62 0 12 12 @cCcCCCCCCCCC point 0 nongenic 134 downstream T21E3.3 165 CB6648_redo I 3935148 1 G C 255 1.56 63 62 0 12 12 @cCcCCCCCCCCC point 0 nongenic 355 downstream T21E3.1 168 CB6648_redo I 3957468 1 C T 255 1.00 63 62 0 21 21 @TTtTTtTtTTtTtTTtTtTtT point 0 nongenic -3523 upstream T21E3.3 168 CB6648_redo I 3957468 1 C T 255 1.00 63 62 0 21 21 @TTtTTtTtTTtTtTTtTtTtT point 0 nongenic -3570 upstream F47B3.4 172 CB6648_redo I 3990146 1 T C 94 3.25 63 62 109 146 255 @Ccc,C,,,,,CC,,cC,,cC,CCCCCCc,C,,CCCC,CcCC,CCC.CCCC,CccCC,cC,,,C,,c,C,,,,Ccc,CC,,.CCc,C,,CC,Ccc,,,,, point 0 nongenic -5564 upstream F28H1.1 173 CB6648_redo I 3990323 1 T C 255 2.62 63 62 98 157 255 @,,c,,c,CC,cc,..C,CCcC,..cC,.,c,cc,,..C,C,C.c.cCC,CCCccccccCCCCCCCCCc.c.CCCCcC,CCCCCCCCc.cc.CCCCCCCC point 0 nongenic -5387 upstream F28H1.1 175 CB6648_redo I 4123614 1 C T 255 1.00 63 62 0 44 44 @ttttTttttTtttttTTTtttTTTTTtttTTtTTtttTtttTTt point 0 missense CAC->TAC[His->Tyr] H31G24.1 176 CB6648_redo I 4127917 1 G A 255 1.00 63 62 0 38 38 @AAaAAAAAAAaaAaAaaAaAaAaAaAaaaaaaaAaAAa point 0 SNP none haw6028 179 CB6648_redo I 4185827 1 G C 31 6.81 63 32 2 3 5 @CCC,, point 0 nongenic -721 upstream C18E3.7c.1 179 CB6648_redo I 4185827 1 G C 31 6.81 63 32 2 3 5 @CCC,, point 0 nongenic -723 upstream C18E3.7b,C18E3.7c.2,C18E3.7d.2,C18E3.7d.3 179 CB6648_redo I 4185827 1 G C 31 6.81 63 32 2 3 5 @CCC,, point 0 nongenic 766 into C18E3.7a 179 CB6648_redo I 4185827 1 G C 31 6.81 63 32 2 3 5 @CCC,, point 0 nongenic 832 downstream R12E2.1 181 CB6648_redo I 4220893 1 C T 132 1.00 63 62 1 5 6 @.TttTt point 0 nongenic -5138 upstream C18E3.9a 181 CB6648_redo I 4220893 1 C T 132 1.00 63 62 1 5 6 @.TttTt point 0 nongenic -8684 upstream C43E11.6a.2,C43E11.6d.1,C43E11.6d.2,C43E11.6e.2 182 CB6648_redo I 4370674 1 C T 255 1.00 63 62 0 38 38 @TTttttttTTtttTttTtttttTttttttttttttTtt point 0 missense GGT->GAT[Gly->Asp] ZK973.9 184 CB6648_redo I 4463742 1 G C 47 7.31 63 62 6 9 15 @CCCccCcCC..,.., point 0 nongenic -1036 upstream C41D11.6 184 CB6648_redo I 4463742 1 G C 47 7.31 63 62 6 9 15 @CCCccCcCC..,.., point 0 nongenic -112 upstream T01A4.3 185 CB6648_redo I 4476753 1 C A 236 1.00 63 62 0 20 20 @aaaaaaaaaaaaaaaaaaaa point 0 SNP none haw6315 186 CB6648_redo I 4479555 1 C T 255 1.00 63 62 0 23 23 @TttTtTttTTTTTTTtttttttt point 0 nongenic -1683 upstream T01A4.1d 187 CB6648_redo I 4510544 1 G A 255 1.00 63 62 0 41 41 @AAaAaaAaAAaaaaaaAAAaAAAAaAAaaAaaAaAaaAAaA point 0 silent TAC->TAT[Tyr->Tyr] Y119C1B.4 3984 CB6648_redo I 4545401 0 X X -1000 -999.99 -1000 -1000 23 1 24 @,,,,,,,,,,,AA,.,,,,,...,. indel 5 nongenic -5078 upstream Y119C1B.3 3984 CB6648_redo I 4545401 0 X X -1000 -999.99 -1000 -1000 23 1 24 @,,,,,,,,,,,AA,.,,,,,...,. indel 5 nongenic -5692 upstream Y119C1B.9 221 CB6648_redo I 4551446 1 G A 255 1.00 63 62 0 46 46 @AAAaaAaaAaaAAaaAaAaaAAaaAAaaaAaAAAAAAaaAaAAAaA point 0 missense GTA->ATA[Val->Ile] Y119C1B.3 222 CB6648_redo I 4565213 1 G A 255 1.00 63 62 0 21 21 @AaaAAAaAaAaAaaAAaAAAa point 0 missense GGA->GAA[Gly->Glu] D1007.14 223 CB6648_redo I 4719685 1 C G 147 1.00 63 62 0 7 7 @gggggGg point 0 nongenic -104 upstream C10H11.7 223 CB6648_redo I 4719685 1 C G 147 1.00 63 62 0 7 7 @gggggGg point 0 nongenic 108 downstream W09C3.1 3985 CB6648_redo I 4785681 0 X X -1000 -999.99 -1000 -1000 6 -4 2 @..,,.,cC indel 0 nongenic -7962 upstream M04F3.5 226 CB6648_redo I 4847556 1 G A 255 1.00 63 62 0 41 41 @aaaaAAAaaAAAaaAaaaaaaaaAAAAAAAaaAAaaaAAaA point 0 three_prime_UTR none F57C9.2 227 CB6648_redo I 4925865 1 C T 255 1.00 63 62 0 20 20 @tttTtTTttTtttTTTtTTT point 0 nongenic -783 upstream F28B3.5a 227 CB6648_redo I 4925865 1 C T 255 1.00 63 62 0 20 20 @tttTtTTttTtttTTTtTTT point 0 nongenic -868 upstream F28B3.5b 227 CB6648_redo I 4925865 1 C T 255 1.00 63 62 0 20 20 @tttTtTTttTtttTTTtTTT point 0 nongenic 370 into F28B3.8 228 CB6648_redo I 5087936 1 G A 255 1.00 63 62 0 36 36 @AAAaaaaaaaAAAaaAAAaAaAaaaaAaaaAaAaAa point 0 nongenic -5651 upstream C30F8.2.1 228 CB6648_redo I 5087936 1 G A 255 1.00 63 62 0 36 36 @AAAaaaaaaaAAAaaAAAaAaAaaaaAaaaAaAaAa point 0 nongenic -8667 upstream C30F8.3 228 CB6648_redo I 5087936 1 G A 255 1.00 63 62 0 36 36 @AAAaaaaaaaAAAaaAAAaAaAaaaaAaaaAaAaAa point 0 nongenic 1420 into C30F8.4b.1 228 CB6648_redo I 5087936 1 G A 255 1.00 63 62 0 36 36 @AAAaaaaaaaAAAaaAAAaAaAaaaaAaaaAaAaAa point 0 nongenic 1617 into C30F8.4a.2,C30F8.4b.2 228 CB6648_redo I 5087936 1 G A 255 1.00 63 62 0 36 36 @AAAaaaaaaaAAAaaAAAaAaAaaaaAaaaAaAaAa point 0 nongenic 1624 into C30F8.4a.1 231 CB6648_redo I 5221052 1 C A 255 1.00 63 62 0 50 50 @AaaaAaaaAaAaaaaaaAAAaAaAaaaaaAaaaAAAaaAAAaaaaAaaAA point 0 nongenic -5830 upstream C32E12.5.1 233 CB6648_redo I 5301101 1 C A 255 1.00 63 62 0 35 35 @AAAaAAAaaAaaAaAaaAAAAAaAaaaaAAAAAAA point 0 SNP none haw6781,uCE1-872 233 CB6648_redo I 5301101 1 C A 255 1.00 63 62 0 35 35 @AAAaAAAaaAaaAaAaaAAAAAaAaaaaAAAAAAA point 0 three_prime_UTR none C01G8.9a 234 CB6648_redo I 5357123 1 T C 58 1.00 63 10 5 8 13 @cCCcCccc.,... point 0 nongenic -1399 upstream F55A12.3 234 CB6648_redo I 5357123 1 T C 58 1.00 63 10 5 8 13 @cCCcCccc.,... point 0 nongenic 187 downstream F55A12.4c 234 CB6648_redo I 5357123 1 T C 58 1.00 63 10 5 8 13 @cCCcCccc.,... point 0 nongenic 96 downstream F55A12.4a 235 CB6648_redo I 5357124 1 C T 10 1.00 63 58 7 7 14 @TTtTttt.,...,. point 0 nongenic -1398 upstream F55A12.3 235 CB6648_redo I 5357124 1 C T 10 1.00 63 58 7 7 14 @TTtTttt.,...,. point 0 nongenic 188 downstream F55A12.4c 235 CB6648_redo I 5357124 1 C T 10 1.00 63 58 7 7 14 @TTtTttt.,...,. point 0 nongenic 97 downstream F55A12.4a 236 CB6648_redo I 5448372 1 A T 255 1.00 63 62 1 32 33 @tTttTtTTt,TtttTtTTTttTTttTtTTtTTT point 0 SNP none haw6835 237 CB6648_redo I 5451259 1 G A 255 1.69 63 62 2 29 31 @.Aa.AAaaAAAaAaAaAAAAaaAAaAAAAAA point 0 nongenic -4400 upstream F27C1.13 238 CB6648_redo I 5528995 1 G A 255 1.00 63 62 0 35 35 @aAAaaaAAaaaaAAaaAAaaAaaAAaaaAAaaAAa point 0 nongenic -3651 upstream F59A3.8 238 CB6648_redo I 5528995 1 G A 255 1.00 63 62 0 35 35 @aAAaaaAAaaaaAAaaAAaaAaaAAaaaAAaaAAa point 0 nongenic 767 into F59A3.1 239 CB6648_redo I 5590737 1 A C 97 1.00 63 62 3 7 10 @,..CCcCccc point 0 nongenic -1153 upstream M01E11.7b.1 239 CB6648_redo I 5590737 1 A C 97 1.00 63 62 3 7 10 @,..CCcCccc point 0 nongenic 126 into M01E11.7d 239 CB6648_redo I 5590737 1 A C 97 1.00 63 62 3 7 10 @,..CCcCccc point 0 nongenic 6517 into M01E11.7a,M01E11.7c 240 CB6648_redo I 5961997 1 G A 255 1.00 63 62 0 37 37 @AAAaaaaAaaaAaAAaaaaaaAAaAaAAAAAaAAAaa point 0 nongenic -2468 upstream B0207.10 241 CB6648_redo I 6139031 1 A T 255 6.94 63 62 0 25 25 @tttttttttttTTTTtTTTtttTTT point 0 nongenic 186 downstream F56F4.6 241 CB6648_redo I 6139031 1 A T 255 6.94 63 62 0 25 25 @tttttttttttTTTTtTTTtttTTT point 0 nongenic 73 downstream F56F4.4 242 CB6648_redo I 6163210 1 T A 255 1.00 63 62 0 34 34 @AaAaaAaaaaaAaAAaAaAaaaAAaAAAaaAAaA point 0 SNP none haw7231 243 CB6648_redo I 6163280 1 T C 145 1.00 63 62 0 5 5 @CcCcc point 0 nongenic -1612 upstream T09B4.7 248 CB6648_redo I 6228712 1 A C 49 4.50 63 62 3 24 27 @CCCCcCCccCCCCC.CC,cC,CCCCCC point 0 nongenic 612 into T08B2.3 249 CB6648_redo I 6263282 1 G C 110 1.00 63 62 0 5 5 @ccCCc point 0 SNP none snp_C48E7[3] 252 CB6648_redo I 6356101 1 C T 255 1.00 63 62 0 46 46 @ttTttTTTTtttTttTTtttTTttttTTTtTtTtttttTttTtttT point 0 nongenic 523 downstream K04F10.6a 252 CB6648_redo I 6356101 1 C T 255 1.00 63 62 0 46 46 @ttTttTTTTtttTttTTtttTTttttTTTtTtTtttttTttTtttT point 0 nongenic 524 downstream K04F10.6b 252 CB6648_redo I 6356101 1 C T 255 1.00 63 62 0 46 46 @ttTttTTTTtttTttTTtttTTttttTTTtTtTtttttTttTtttT point 0 nongenic 580 into K04F10.4d 252 CB6648_redo I 6356101 1 C T 255 1.00 63 62 0 46 46 @ttTttTTTTtttTttTTtttTTttttTTTtTtTtttttTttTtttT point 0 nongenic 666 downstream K04F10.4c 253 CB6648_redo I 6500125 1 G A 255 1.69 63 62 5 28 33 @,a,a,aaaaAA,AaaAaAaAaAaAAAaa.aaaa point 0 silent GAG->GAA[Glu->Glu] C55B7.3 254 CB6648_redo I 6801831 1 T C 27 1.00 63 62 1 3 4 @CcC, point 0 three_prime_UTR none E02D9.1b.1,E02D9.1b.2 255 CB6648_redo I 6820252 1 T C 255 1.00 63 62 0 26 26 @CCCCCcCCCccccCcCCCccCcCCCc point 0 SNP none haw7362 256 CB6648_redo I 6913792 1 C T 255 1.00 63 62 0 51 51 @TTttTtTTTTttTttTTttttTtTtTTtttttttTtTTttTTTtttttTTt point 0 nongenic -1253 upstream C48B6.3.1 256 CB6648_redo I 6913792 1 C T 255 1.00 63 62 0 51 51 @TTttTtTTTTttTttTTttttTtTtTTtttttttTtTTttTTTtttttTTt point 0 nongenic -213 upstream C48B6.6a,C48B6.6b 257 CB6648_redo I 6949307 1 A G 222 2.19 63 62 0 14 14 @gggggggggggggg point 0 nongenic -1826 upstream T10B11.1 257 CB6648_redo I 6949307 1 A G 222 2.19 63 62 0 14 14 @gggggggggggggg point 0 nongenic -3949 upstream T10B11.6 257 CB6648_redo I 6949307 1 A G 222 2.19 63 62 0 14 14 @gggggggggggggg point 0 nongenic 1151 into T10B11.7a 257 CB6648_redo I 6949307 1 A G 222 2.19 63 62 0 14 14 @gggggggggggggg point 0 nongenic 814 into T10B11.7b 258 CB6648_redo I 6949331 1 T A 229 3.00 63 62 0 19 19 @aaaaaaaaaaaaaaaaaaa point 0 nongenic -1802 upstream T10B11.1 258 CB6648_redo I 6949331 1 T A 229 3.00 63 62 0 19 19 @aaaaaaaaaaaaaaaaaaa point 0 nongenic -3973 upstream T10B11.6 258 CB6648_redo I 6949331 1 T A 229 3.00 63 62 0 19 19 @aaaaaaaaaaaaaaaaaaa point 0 nongenic 1127 into T10B11.7a 258 CB6648_redo I 6949331 1 T A 229 3.00 63 62 0 19 19 @aaaaaaaaaaaaaaaaaaa point 0 nongenic 790 into T10B11.7b 259 CB6648_redo I 7140681 1 G T 255 1.00 63 62 0 33 33 @TttTttttttTTTttttTtTtTttttTtttttT point 0 nongenic -708 upstream K10D3.4 259 CB6648_redo I 7140681 1 G T 255 1.00 63 62 0 33 33 @TttTttttttTTTttttTtTtTttttTtttttT point 0 nongenic 405 into H37N21.1 260 CB6648_redo I 7140819 1 T C 255 1.00 63 62 0 31 31 @CcCCccCcCCcCCCCCcCcCcCCCcCcCCcc point 0 SNP none haw7427 261 CB6648_redo I 7140831 1 A T 255 1.00 63 62 0 32 32 @TtTTtTTTTTtTtTtTTTtTtTTtttTTTTTT point 0 SNP none haw7428 262 CB6648_redo I 7251393 1 A T 9 1.00 63 62 6 6 12 @.....,ttTTtt point 0 nongenic -112 upstream R06C7.7b 262 CB6648_redo I 7251393 1 A T 9 1.00 63 62 6 6 12 @.....,ttTTtt point 0 nongenic -139 upstream R06C7.7a.1 262 CB6648_redo I 7251393 1 A T 9 1.00 63 62 6 6 12 @.....,ttTTtt point 0 nongenic -545 upstream R06C7.8 263 CB6648_redo I 7301404 1 C G 255 1.00 63 62 0 33 33 @ggGgGggggggGgGgggGGGgggggggggGGgg point 0 missense GGC->GCC[Gly->Ala] F13G3.5a,F13G3.5b.1,F13G3.5b.2 264 CB6648_redo I 7363706 1 A G 37 1.00 63 62 1 5 6 @,GGGGg point 0 nongenic -4607 upstream F07A5.4.2 264 CB6648_redo I 7363706 1 A G 37 1.00 63 62 1 5 6 @,GGGGg point 0 nongenic 3317 into F07A5.5 265 CB6648_redo I 7428554 1 T C 255 1.00 63 62 0 48 48 @cCCCCcccccCCCcccCcCCcCCCcccCcCCCCCCccccCCCCccCCc point 0 SNP none haw7535 266 CB6648_redo I 7547117 1 A T 255 1.00 63 62 0 21 21 @TtTTTTTTTtTTTtTTtTtTt point 0 SNP none haw7629 267 CB6648_redo I 7547127 1 A T 255 1.00 63 62 0 23 23 @TTTTTtTTTtTTtTtTtTTTTTt point 0 SNP none haw7630 268 CB6648_redo I 7547365 1 C A 255 1.00 63 62 0 31 31 @aaaAaaAAaaaaAaAAAaaAaaaaaAaaaaa point 0 SNP none haw7631 278 CB6648_redo I 7799575 1 C T 255 1.00 63 62 0 23 23 @TTTTTTttTtTtTttTttTTTTt point 0 nongenic -6041 upstream D2005.6 278 CB6648_redo I 7799575 1 C T 255 1.00 63 62 0 23 23 @TTTTTTttTtTtTttTttTTTTt point 0 nongenic 870 downstream D2005.2 279 CB6648_redo I 7869008 1 T A 168 1.00 63 62 0 7 7 @AAAAaAa point 0 nongenic -1095 upstream R11A5.6 279 CB6648_redo I 7869008 1 T A 168 1.00 63 62 0 7 7 @AAAAaAa point 0 nongenic -749 upstream R11A5.4c.1 279 CB6648_redo I 7869008 1 T A 168 1.00 63 62 0 7 7 @AAAAaAa point 0 nongenic 2533 into R11A5.4d.5 279 CB6648_redo I 7869008 1 T A 168 1.00 63 62 0 7 7 @AAAAaAa point 0 nongenic 2614 into R11A5.4a.1,R11A5.4a.2,R11A5.4b.2 279 CB6648_redo I 7869008 1 T A 168 1.00 63 62 0 7 7 @AAAAaAa point 0 nongenic 2657 into R11A5.4c.2 279 CB6648_redo I 7869008 1 T A 168 1.00 63 62 0 7 7 @AAAAaAa point 0 nongenic 2659 into R11A5.4c.3,R11A5.4d.1,R11A5.4d.3,R11A5.4d.4,R11A5.4d.6 279 CB6648_redo I 7869008 1 T A 168 1.00 63 62 0 7 7 @AAAAaAa point 0 nongenic 2668 into R11A5.4d.2 279 CB6648_redo I 7869008 1 T A 168 1.00 63 62 0 7 7 @AAAAaAa point 0 nongenic 2832 into R11A5.4c.4 279 CB6648_redo I 7869008 1 T A 168 1.00 63 62 0 7 7 @AAAAaAa point 0 nongenic 2883 into R11A5.4b.1 280 CB6648_redo I 7869009 1 C T 150 1.00 63 62 0 7 7 @TTTTtTt point 0 nongenic -1096 upstream R11A5.6 280 CB6648_redo I 7869009 1 C T 150 1.00 63 62 0 7 7 @TTTTtTt point 0 nongenic -748 upstream R11A5.4c.1 280 CB6648_redo I 7869009 1 C T 150 1.00 63 62 0 7 7 @TTTTtTt point 0 nongenic 2534 into R11A5.4d.5 280 CB6648_redo I 7869009 1 C T 150 1.00 63 62 0 7 7 @TTTTtTt point 0 nongenic 2615 into R11A5.4a.1,R11A5.4a.2,R11A5.4b.2 280 CB6648_redo I 7869009 1 C T 150 1.00 63 62 0 7 7 @TTTTtTt point 0 nongenic 2658 into R11A5.4c.2 280 CB6648_redo I 7869009 1 C T 150 1.00 63 62 0 7 7 @TTTTtTt point 0 nongenic 2660 into R11A5.4c.3,R11A5.4d.1,R11A5.4d.3,R11A5.4d.4,R11A5.4d.6 280 CB6648_redo I 7869009 1 C T 150 1.00 63 62 0 7 7 @TTTTtTt point 0 nongenic 2669 into R11A5.4d.2 280 CB6648_redo I 7869009 1 C T 150 1.00 63 62 0 7 7 @TTTTtTt point 0 nongenic 2833 into R11A5.4c.4 280 CB6648_redo I 7869009 1 C T 150 1.00 63 62 0 7 7 @TTTTtTt point 0 nongenic 2884 into R11A5.4b.1 281 CB6648_redo I 7879475 1 C T 255 1.00 63 62 0 10 10 @tTTTTTTtTt point 0 SNP none haw7930 282 CB6648_redo I 7879517 1 G A 246 1.00 63 62 0 10 10 @aAaaAAAAAa point 0 nongenic -3962 upstream R11A5.7.1 282 CB6648_redo I 7879517 1 G A 246 1.00 63 62 0 10 10 @aAaaAAAAAa point 0 nongenic -4828 upstream F55D12.1 283 CB6648_redo I 7879522 1 A T 255 1.19 63 62 0 18 18 @tTttTTTTTtTTTTtTTT point 0 nongenic -3967 upstream R11A5.7.1 283 CB6648_redo I 7879522 1 A T 255 1.19 63 62 0 18 18 @tTttTTTTTtTTTTtTTT point 0 nongenic -4823 upstream F55D12.1 284 CB6648_redo I 8145316 1 C A 255 1.00 63 62 0 45 45 @AAaaaaAAAAaaAAAAAAAaaaAaaAaAAaaaAaaaaAaAAaAaA point 0 nongenic -2104 upstream T28B8.2 284 CB6648_redo I 8145316 1 C A 255 1.00 63 62 0 45 45 @AAaaaaAAAAaaAAAAAAAaaaAaaAaAAaaaAaaaaAaAAaAaA point 0 nongenic -2784 upstream T28B8.5 285 CB6648_redo I 8202408 1 G T 255 1.00 63 62 0 39 39 @ttttttTTttttTtTttTTTtTttTTtTTTTTttttTTt point 0 nongenic -19481 upstream F08A10.2 285 CB6648_redo I 8202408 1 G T 255 1.00 63 62 0 39 39 @ttttttTTttttTtTttTTTtTttTTtTTTTTttttTTt point 0 nongenic -3045 upstream F08A10.1b,F08A10.1c 285 CB6648_redo I 8202408 1 G T 255 1.00 63 62 0 39 39 @ttttttTTttttTtTttTTTtTttTTtTTTTTttttTTt point 0 nongenic 6072 into F08A10.1a,F08A10.1e 285 CB6648_redo I 8202408 1 G T 255 1.00 63 62 0 39 39 @ttttttTTttttTtTttTTTtTttTTtTTTTTttttTTt point 0 nongenic 6326 into F08A10.1d 286 CB6648_redo I 8213805 1 T A 255 8.94 63 62 0 28 28 @aAAAAaAAAaaAaAaAAaaAAaAAaAAA point 0 nongenic -597 upstream T02E1.3a,T02E1.3c 286 CB6648_redo I 8213805 1 T A 255 8.94 63 62 0 28 28 @aAAAAaAAAaaAaAaAAaaAAaAAaAAA point 0 nongenic -885 upstream T02E1.3b 286 CB6648_redo I 8213805 1 T A 255 8.94 63 62 0 28 28 @aAAAAaAAAaaAaAaAAaaAAaAAaAAA point 0 nongenic 1387 into T02E1.5a 286 CB6648_redo I 8213805 1 T A 255 8.94 63 62 0 28 28 @aAAAAaAAAaaAaAaAAaaAAaAAaAAA point 0 nongenic 1446 into T02E1.5b 286 CB6648_redo I 8213805 1 T A 255 8.94 63 62 0 28 28 @aAAAAaAAAaaAaAaAAaaAAaAAaAAA point 0 nongenic 493 into T02E1.5c 288 CB6648_redo I 8303619 1 T C 255 1.00 63 62 0 31 31 @CccCcCcccCcccCCCccCcCCccCCCCCCc point 0 nongenic 2796 into F52B5.1c 288 CB6648_redo I 8303619 1 T C 255 1.00 63 62 0 31 31 @CccCcCcccCcccCCCccCcCCccCCCCCCc point 0 nongenic 2878 into F52B5.1b 288 CB6648_redo I 8303619 1 T C 255 1.00 63 62 0 31 31 @CccCcCcccCcccCCCccCcCCccCCCCCCc point 0 nongenic 3940 into F52B5.1a 4001 CB6648_redo I 8347873 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @,,..aa indel 0 nongenic -1857 upstream C34B7.3 4001 CB6648_redo I 8347873 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @,,..aa indel 0 nongenic -5530 upstream F16D3.1 297 CB6648_redo I 9039720 1 A G 255 1.00 63 62 0 24 24 @ggGGGgGggGgGGGgGgGgGGGgG point 0 SNP none haw8746 298 CB6648_redo I 9097713 1 C T 255 1.00 63 62 0 32 32 @TTtTttTTTttTttTTttTTTTTtttttTTtt point 0 nongenic -11494 upstream T06D10.3 298 CB6648_redo I 9097713 1 C T 255 1.00 63 62 0 32 32 @TTtTttTTTttTttTTttTTTTTtttttTTtt point 0 nongenic 1765 into W10D5.1 160781 CB6648_redo I 9205275 55 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 395 to 450 bp into F25H5.1c.2 160781 CB6648_redo I 9205275 55 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 5000 to 5055 bp into F25H5.1a,F25H5.1c.3,F25H5.1f 160781 CB6648_redo I 9205275 55 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 5002 to 5057 bp into F25H5.1c.1 299 CB6648_redo I 9235193 1 C T 255 1.00 63 62 0 36 36 @TtTtTTTttTtttTTTtTTtTTTTttTtTtttttTt point 0 SNP none haw8914 300 CB6648_redo I 9235318 1 G A 255 1.00 63 62 0 27 27 @aAAAAAaaaAAAaAAAAaAAAAaAAAa point 0 SNP none haw8915 301 CB6648_redo I 9235427 1 G A 255 1.00 63 62 0 22 22 @aAaAAaAAaAAaAaAAaAAAaa point 0 nongenic -1877 upstream VF36H2L.1 301 CB6648_redo I 9235427 1 G A 255 1.00 63 62 0 22 22 @aAaAAaAAaAAaAaAAaAAAaa point 0 nongenic 1258 into F36H2.1b 301 CB6648_redo I 9235427 1 G A 255 1.00 63 62 0 22 22 @aAaAAaAAaAAaAaAAaAAAaa point 0 nongenic 758 into F36H2.1a,F36H2.1c 302 CB6648_redo I 9246865 1 C G 255 1.00 63 62 0 48 48 @gGGGggGGgGGggGgggggGGGggGggGGgggggGgggGgGgGgGgGg point 0 missense CGT->CCT[Arg->Pro] F36H2.2 302 CB6648_redo I 9246865 1 C G 255 1.00 63 62 0 48 48 @gGGGggGGgGGggGgggggGGGggGggGGgggggGgggGgGgGgGgGg point 0 SNP none haw8926 303 CB6648_redo I 9246866 1 G C 255 1.00 63 62 0 48 48 @CCCccCCcCCccCcccccCCCccCccCCcccccCcccCcCcCcCcCcc point 0 missense CGT->GGT[Arg->Gly] F36H2.2 303 CB6648_redo I 9246866 1 G C 255 1.00 63 62 0 48 48 @CCCccCCcCCccCcccccCCCccCccCCcccccCcccCcCcCcCcCcc point 0 SNP none haw8927 304 CB6648_redo I 9346153 1 A C 237 1.00 63 62 0 10 10 @cCcCCCcccc point 0 nongenic -3665 upstream C12C8.3a,C12C8.3b 304 CB6648_redo I 9346153 1 A C 237 1.00 63 62 0 10 10 @cCcCCCcccc point 0 nongenic 1439 into M04C9.2 305 CB6648_redo I 9346156 1 T C 171 1.00 63 62 0 7 7 @CCCcccc point 0 nongenic -3668 upstream C12C8.3a,C12C8.3b 305 CB6648_redo I 9346156 1 T C 171 1.00 63 62 0 7 7 @CCCcccc point 0 nongenic 1442 into M04C9.2 306 CB6648_redo I 9357394 1 A G 255 1.00 63 62 0 25 25 @ggggggggggggGGgGgGgggGggG point 0 nongenic -1671 upstream M04C9.5a 306 CB6648_redo I 9357394 1 A G 255 1.00 63 62 0 25 25 @ggggggggggggGGgGgGgggGggG point 0 nongenic -323 upstream M04C9.4 308 CB6648_redo I 9384409 1 C A 73 1.00 63 62 0 16 16 @GGggGgAAAAAAaaaa point 0 nongenic 5217 into F16A11.3a,F16A11.3b,F16A11.3c 308 CB6648_redo I 9384409 1 C A 73 1.00 63 62 0 16 16 @GGggGgAAAAAAaaaa point 0 nongenic 5900 into F16A11.3d 309 CB6648_redo I 9384410 1 C G 88 1.00 63 62 0 14 14 @aaAaGGGGGGgggg point 0 nongenic 5216 into F16A11.3a,F16A11.3b,F16A11.3c 309 CB6648_redo I 9384410 1 C G 88 1.00 63 62 0 14 14 @aaAaGGGGGGgggg point 0 nongenic 5899 into F16A11.3d 310 CB6648_redo I 9457731 1 G A 255 1.00 63 62 0 36 36 @AAaAaAAAAaAaaaAaaAAAaaAaaAaAaaaAAAaA point 0 SNP none haw9060 311 CB6648_redo I 9573999 1 T C 255 1.00 63 62 0 40 40 @cccCCCCccCcccccccCccCCccCccccccCccCcccCc point 0 nongenic -5777 upstream C36F7.4d 311 CB6648_redo I 9573999 1 T C 255 1.00 63 62 0 40 40 @cccCCCCccCcccccccCccCCccCccccccCccCcccCc point 0 nongenic 162 into C36F7.4a.1 311 CB6648_redo I 9573999 1 T C 255 1.00 63 62 0 40 40 @cccCCCCccCcccccccCccCCccCccccccCccCcccCc point 0 nongenic 180 into C36F7.4a.2 311 CB6648_redo I 9573999 1 T C 255 1.00 63 62 0 40 40 @cccCCCCccCcccccccCccCCccCccccccCccCcccCc point 0 nongenic 370 into C36F7.4b,C36F7.4c 311 CB6648_redo I 9573999 1 T C 255 1.00 63 62 0 40 40 @cccCCCCccCcccccccCccCCccCccccccCccCcccCc point 0 nongenic 794 downstream C36F7.5 312 CB6648_redo I 9699160 1 T C 255 1.00 63 62 0 42 42 @CccCCCCCCcccccCCcCCcCccCccccCCCcCcCCCcccCc point 0 missense AAT->AGT[Asn->Ser] C04F12.8 312 CB6648_redo I 9699160 1 T C 255 1.00 63 62 0 42 42 @CccCCCCCCcccccCCcCCcCccCccccCCCcCcCCCcccCc point 0 SNP none haw9282 313 CB6648_redo I 9737906 1 C A 255 1.00 63 62 0 29 29 @aaAAaAaaaAaAAaaAAaaaAAaAaaaaA point 0 SNP none haw9323 322 CB6648_redo I 9830825 1 C T 255 1.00 63 62 0 33 33 @tTTTTTtttTTtTtTTTttTtTtTtTTTTTTTT point 0 nongenic -572 upstream Y67A6A.1 322 CB6648_redo I 9830825 1 C T 255 1.00 63 62 0 33 33 @tTTTTTtttTTtTtTTTttTtTtTtTTTTTTTT point 0 nongenic -8762 upstream Y67A6A.2a,Y67A6A.2b.1,Y67A6A.2b.2 323 CB6648_redo I 9940580 1 A T 255 1.00 63 62 0 43 43 @tTtttTTTttTttTtTTTTtTtTTtttTtTTTtTTtTttTTTT point 0 SNP none haw9585 324 CB6648_redo I 9952384 1 C G 68 1.00 63 62 2 5 7 @gGGgg., point 0 nongenic -14093 upstream Y106G6A.1 324 CB6648_redo I 9952384 1 C G 68 1.00 63 62 2 5 7 @gGGgg., point 0 nongenic 346 into T24D1.1a 324 CB6648_redo I 9952384 1 C G 68 1.00 63 62 2 5 7 @gGGgg., point 0 nongenic 990 into T24D1.1b 325 CB6648_redo I 9997302 1 C T 255 1.00 63 62 0 33 33 @TttTTTTttTTtTtttttTTtttttttttttTt point 0 nongenic -17422 upstream C03C11.1 325 CB6648_redo I 9997302 1 C T 255 1.00 63 62 0 33 33 @TttTTTTttTTtTtttttTTtttttttttttTt point 0 nongenic 2583 into T23D8.8 326 CB6648_redo I 10109254 1 T A 255 1.00 63 62 0 36 36 @AAaaAaaaaaAaAaaaAAAaaAaaAAaAaaAaAAAa point 0 SNP none haw9645 4012 CB6648_redo I 10113279 0 X X -1000 -999.99 -1000 -1000 6 0 6 @.,,.,,Tt indel 0 inframe none Y106G6D.3 338 CB6648_redo I 10188886 1 T C 255 1.75 63 62 0 32 32 @cccccccccCccCccCccCCcccCCCccCCCC point 0 silent AAA->AAG[Lys->Lys] C25A1.10a,C25A1.10b 342 CB6648_redo I 10205458 1 A C 60 2.00 37 6 0 5 5 @CCCcc point 0 nongenic -5028 upstream Y106G6E.1 352 CB6648_redo I 10243054 1 G A 98 1.00 63 62 2 5 7 @AaAAa,. point 0 nongenic -11848 upstream Y106G6E.6.1 352 CB6648_redo I 10243054 1 G A 98 1.00 63 62 2 5 7 @AaAAa,. point 0 nongenic -5223 upstream ZC247.3 354 CB6648_redo I 10270191 1 A C 3 6.19 0 0 25 42 67 @CCCCC.CCcCCcCCccCC,cc.cccCCC,CCCCc,,CCCC,CC.CC,C,,C.,CC,..,,,,,,,.. point 0 missense TTC->GTC[Phe->Val] ZC247.1 373 CB6648_redo I 10462796 1 G C 3 1.31 63 2 1 3 4 @ccC. point 0 nongenic -7172 upstream Y106G6H.9 374 CB6648_redo I 10462798 1 G A 61 1.00 63 2 0 4 4 @aAAa point 0 nongenic -7174 upstream Y106G6H.9 375 CB6648_redo I 10462800 1 A G 134 1.00 63 32 0 6 6 @gGGggg point 0 nongenic -7176 upstream Y106G6H.9 376 CB6648_redo I 10489711 1 G C 9 1.00 63 62 5 5 10 @,,.,,CccCc point 0 nongenic -11877 upstream F37D6.6 376 CB6648_redo I 10489711 1 G C 9 1.00 63 62 5 5 10 @,,.,,CccCc point 0 nongenic 730 downstream F37D6.4 378 CB6648_redo I 10595968 1 T C 255 1.00 63 62 0 46 46 @CccCcCCcCCccCCCccCCCCCCccccCCCCCcCccCccCcCCCCc point 0 nongenic -2730 upstream T22A3.5 378 CB6648_redo I 10595968 1 T C 255 1.00 63 62 0 46 46 @CccCcCCcCCccCCCccCCCCCCccccCCCCCcCccCccCcCCCCc point 0 nongenic 1506 into T22A3.6 382 CB6648_redo I 10946879 1 T A 3 8.69 0 4 3 125 128 @AAAAAAAAAAAAaAAAaAAAaAAAAAAAaAAAaAaAAaaAaa.aAaaAa.aaAAAaaAAaAAAAAAaaAaaaAAaaaaaAaaaAAAaAA,AAAaaAAAA point 0 SNP none uCE1-1097 401 CB6648_redo I 10971070 1 C G 77 1.00 63 62 25 29 54 @G.GG..g.G.gGgggg...g.g.,.GGG.G,gGGgg,G.gg.G...GG,,G... point 0 nongenic -910 upstream Y52B11A.2a,Y52B11A.2b 401 CB6648_redo I 10971070 1 C G 77 1.00 63 62 25 29 54 @G.GG..g.G.gGgggg...g.g.,.GGG.G,gGGgg,G.gg.G...GG,,G... point 0 nongenic -945 upstream Y52B11A.3b 401 CB6648_redo I 10971070 1 C G 77 1.00 63 62 25 29 54 @G.GG..g.G.gGgggg...g.g.,.GGG.G,gGGgg,G.gg.G...GG,,G... point 0 nongenic 585 into Y52B11A.3a 402 CB6648_redo I 10978887 1 A G 255 1.00 63 62 0 31 31 @gggGggGggGGggGgggGggggGgggggggg point 0 silent TCA->TCG[Ser->Ser] Y52B11A.3a,Y52B11A.3b 402 CB6648_redo I 10978887 1 A G 255 1.00 63 62 0 31 31 @gggGggGggGGggGgggGggggGgggggggg point 0 SNP none haw9930 403 CB6648_redo I 11001775 1 C A 255 1.00 63 62 0 20 20 @aaAAAaaAAAaAaaaAAaAa point 0 nongenic -13703 upstream Y52B11A.5 403 CB6648_redo I 11001775 1 C A 255 1.00 63 62 0 20 20 @aaAAAaaAAAaAaaaAAaAa point 0 nongenic 2502 into Y52B11A.4 405 CB6648_redo I 11220200 1 C A 255 1.00 63 62 0 42 42 @AAAAaAAaAaaaAAAaAaAaaAaaAAaAaAaaaAAAAaaaaA point 0 SNP none haw10216 406 CB6648_redo I 11254266 1 A G 3 6.06 0 2 18 30 48 @,TGG.GGGGGGG,,GGG,GGGGGG,,G,,G,,,G,,,,,g,GGGGGGG point 0 nongenic -9270 upstream F46A8.6 406 CB6648_redo I 11254266 1 A G 3 6.06 0 2 18 30 48 @,TGG.GGGGGGG,,GGG,GGGGGG,,G,,G,,,G,,,,,g,GGGGGGG point 0 nongenic 925 into F46A8.10 4021 CB6648_redo I 11505539 0 X X -1000 -999.99 -1000 -1000 6 -1 5 @,...,,aAAaA indel 0 nongenic -1582 downstream F32B4.8 4021 CB6648_redo I 11505539 0 X X -1000 -999.99 -1000 -1000 6 -1 5 @,...,,aAAaA indel 0 nongenic -4518 upstream F32B4.1 4021 CB6648_redo I 11505539 0 X X -1000 -999.99 -1000 -1000 6 -1 5 @,...,,aAAaA indel 0 nongenic -5893 upstream K08C9.6 411 CB6648_redo I 11522478 1 T G 43 1.00 63 62 1 4 5 @gGGG, point 0 nongenic -1826 upstream F32B4.5 411 CB6648_redo I 11522478 1 T G 43 1.00 63 62 1 4 5 @gGGG, point 0 nongenic -253 upstream F32B4.4a 411 CB6648_redo I 11522478 1 T G 43 1.00 63 62 1 4 5 @gGGG, point 0 nongenic 4075 into F32B4.4b.1 411 CB6648_redo I 11522478 1 T G 43 1.00 63 62 1 4 5 @gGGG, point 0 nongenic 656 into F32B4.4b.2 412 CB6648_redo I 11603465 1 A G 255 1.06 63 62 0 26 26 @ggGgGggGGgGGgggGgggGgGGGgg point 0 SNP none haw10691 413 CB6648_redo I 11628456 1 A G 238 2.00 63 62 0 22 22 @gggggGGgGggGgggGgggggg point 0 nongenic -1174 upstream W04G5.3 414 CB6648_redo I 11659706 1 G C 6 1.62 63 2 1 4 5 @.CCcc point 0 nongenic -16224 upstream F11A6.1a.2 415 CB6648_redo I 11713508 1 C T 119 2.69 63 62 11 17 28 @ttttttTtTTtTttt,,,,,,,,t,.,t point 0 SNP none haw10896 4024 CB6648_redo I 11880752 0 X X -1000 -999.99 -1000 -1000 1 1 2 @.cc indel 0 nongenic -12656 upstream Y47H9C.4a,Y47H9C.4b,Y47H9C.4c 4024 CB6648_redo I 11880752 0 X X -1000 -999.99 -1000 -1000 1 1 2 @.cc indel 0 nongenic -2959 downstream Y47H9C.5a 4024 CB6648_redo I 11880752 0 X X -1000 -999.99 -1000 -1000 1 1 2 @.cc indel 0 nongenic -4270 upstream Y47H9C.5b 418 CB6648_redo I 11883806 1 G C 255 8.00 63 62 0 25 25 @CccccCCcCCccCcCcCcCcCcccc point 0 nongenic -1215 upstream Y47H9C.5b 418 CB6648_redo I 11883806 1 G C 255 8.00 63 62 0 25 25 @CccccCCcCCccCcCcCcCcCcccc point 0 nongenic -15710 upstream Y47H9C.4a,Y47H9C.4b,Y47H9C.4c 418 CB6648_redo I 11883806 1 G C 255 8.00 63 62 0 25 25 @CccccCCcCCccCcCcCcCcCcccc point 0 nongenic 3453 into Y47H9C.5a 419 CB6648_redo I 11905377 1 T C 255 1.00 63 62 0 43 43 @CCcCccCCcCccCcCCCcCcCccCCccccCCCCCccCCcCCCc point 0 SNP none haw11247 420 CB6648_redo I 11975955 1 A T 255 3.50 63 62 0 31 31 @tttttttttttTttTttttTttTtTtttttT point 0 nongenic -3474 upstream Y53C10A.4 420 CB6648_redo I 11975955 1 A T 255 3.50 63 62 0 31 31 @tttttttttttTttTttttTttTtTtttttT point 0 nongenic -4167 upstream Y53C10A.15 421 CB6648_redo I 11975961 1 C A 255 3.50 63 62 0 32 32 @aaagaaaAaaAaaaaAaaAaAaaaaaAAaAAA point 0 nongenic -3468 upstream Y53C10A.4 421 CB6648_redo I 11975961 1 C A 255 3.50 63 62 0 32 32 @aaagaaaAaaAaaaaAaaAaAaaaaaAAaAAA point 0 nongenic -4173 upstream Y53C10A.15 422 CB6648_redo I 11988102 1 C T 255 1.00 63 62 0 31 31 @tttTTtTTTtTtTtttTtttttttTTTttTt point 0 SNP none haw11443 423 CB6648_redo I 12093640 1 T A 108 2.19 63 62 21 44 65 @,,,,.,,,,...AAAAAaaaaAAaAAAa,AAAAAAAAAAAAAAAAaAAaA,AAAAA,,A,,,A.. point 0 nongenic -3680 upstream Y47H10A.3 423 CB6648_redo I 12093640 1 T A 108 2.19 63 62 21 44 65 @,,,,.,,,,...AAAAAaaaaAAaAAAa,AAAAAAAAAAAAAAAAaAAaA,AAAAA,,A,,,A.. point 0 nongenic 831 into Y47H10A.4 426 CB6648_redo I 12479794 1 G T 160 5.75 63 62 0 8 8 @TTTTTTTt point 0 nongenic -1216 upstream T27F6.2 426 CB6648_redo I 12479794 1 G T 160 5.75 63 62 0 8 8 @TTTTTTTt point 0 nongenic -4375 upstream T27F6.4 427 CB6648_redo I 12479795 1 G T 158 5.75 63 62 0 8 8 @TTTTTTTt point 0 nongenic -1217 upstream T27F6.2 427 CB6648_redo I 12479795 1 G T 158 5.75 63 62 0 8 8 @TTTTTTTt point 0 nongenic -4374 upstream T27F6.4 428 CB6648_redo I 12479871 1 A G 83 1.38 63 62 2 6 8 @GGGGGG.. point 0 nongenic -1293 upstream T27F6.2 428 CB6648_redo I 12479871 1 A G 83 1.38 63 62 2 6 8 @GGGGGG.. point 0 nongenic -4298 upstream T27F6.4 429 CB6648_redo I 12676428 1 G T 46 1.00 63 62 2 5 7 @,TTtT.T point 0 nongenic -2771 upstream T26E3.2 433 CB6648_redo I 12862392 1 T A 255 1.00 63 62 0 44 44 @AaaAAAAAaaaaAAaaaaaaaAAaaaAaaaAaaAAAAaAaAaAa point 0 SNP none haw13170 434 CB6648_redo I 12871730 1 T C 255 1.00 63 62 0 44 44 @ccccccCcCcCCcCCcCCcccCCCCcCCcCCccCCcccCccCcc point 0 nongenic -2184 upstream Y18D10A.23 434 CB6648_redo I 12871730 1 T C 255 1.00 63 62 0 44 44 @ccccccCcCcCCcCCcCCcccCCCCcCCcCCccCCcccCccCcc point 0 nongenic -6853 upstream Y18D10A.13 435 CB6648_redo I 12871733 1 T C 255 1.00 63 62 0 44 44 @cccCcCcCCcCCcCCcccCCCCcCCcCCccCCcccCccCccccC point 0 SNP none uCE1-1387 436 CB6648_redo I 12880362 1 G C 7 1.00 63 62 6 9 15 @,,,,,.cccccCccC point 0 nongenic -10816 upstream Y18D10A.23 436 CB6648_redo I 12880362 1 G C 7 1.00 63 62 6 9 15 @,,,,,.cccccCccC point 0 nongenic 1779 into Y18D10A.13 443 CB6648_redo I 12899593 1 T G 16 6.75 0 0 0 8 8 @GGGGGGGG point 0 nongenic -30047 upstream Y18D10A.23 443 CB6648_redo I 12899593 1 T G 16 6.75 0 0 0 8 8 @GGGGGGGG point 0 nongenic 3178 into Y18D10A.13 444 CB6648_redo I 12910874 1 C T 110 1.69 63 62 0 20 20 @tTttTTttTTTTTTTTtTTT point 0 nongenic -5555 upstream Y18D10A.25 445 CB6648_redo I 12916972 1 G C 108 1.25 63 10 0 5 5 @CCCCC point 0 nongenic -1735 upstream Y18D10A.19.1 445 CB6648_redo I 12916972 1 G C 108 1.25 63 10 0 5 5 @CCCCC point 0 nongenic 543 into Y18D10A.25 446 CB6648_redo I 13015757 1 T C 255 1.00 63 62 0 30 30 @CCCCCccCCCccCcCcCCCccCcCCCCcCc point 0 nongenic -17855 upstream W05B5.4 446 CB6648_redo I 13015757 1 T C 255 1.00 63 62 0 30 30 @CCCCCccCCCccCcCcCCCccCcCCCCcCc point 0 nongenic 3550 into ZK256.1b 446 CB6648_redo I 13015757 1 T C 255 1.00 63 62 0 30 30 @CCCCCccCCCccCcCcCCCccCcCCCCcCc point 0 nongenic 4308 into ZK256.1c 446 CB6648_redo I 13015757 1 T C 255 1.00 63 62 0 30 30 @CCCCCccCCCccCcCcCCCccCcCCCCcCc point 0 nongenic 7524 into ZK256.1a 447 CB6648_redo I 13015767 1 T C 255 1.00 63 62 0 33 33 @ccCCCccCcCcCCCccCcCCCCcCccccCcccc point 0 nongenic -17845 upstream W05B5.4 447 CB6648_redo I 13015767 1 T C 255 1.00 63 62 0 33 33 @ccCCCccCcCcCCCccCcCCCCcCccccCcccc point 0 nongenic 3560 into ZK256.1b 447 CB6648_redo I 13015767 1 T C 255 1.00 63 62 0 33 33 @ccCCCccCcCcCCCccCcCCCCcCccccCcccc point 0 nongenic 4318 into ZK256.1c 447 CB6648_redo I 13015767 1 T C 255 1.00 63 62 0 33 33 @ccCCCccCcCcCCCccCcCCCCcCccccCcccc point 0 nongenic 7514 into ZK256.1a 448 CB6648_redo I 13015797 1 T C 255 9.88 63 62 0 18 18 @cccCccccCCcccccCCc point 0 nongenic -17815 upstream W05B5.4 448 CB6648_redo I 13015797 1 T C 255 9.88 63 62 0 18 18 @cccCccccCCcccccCCc point 0 nongenic 3590 into ZK256.1b 448 CB6648_redo I 13015797 1 T C 255 9.88 63 62 0 18 18 @cccCccccCCcccccCCc point 0 nongenic 4348 into ZK256.1c 448 CB6648_redo I 13015797 1 T C 255 9.88 63 62 0 18 18 @cccCccccCCcccccCCc point 0 nongenic 7484 into ZK256.1a 450 CB6648_redo I 13059695 1 C A 255 1.00 63 62 0 44 44 @AaaaAAAAaAaaAAaAaaAaaAaaAAaaaAaaaaaAAaaaAAAa point 0 nongenic -7259 upstream Y26D4A.2 450 CB6648_redo I 13059695 1 C A 255 1.00 63 62 0 44 44 @AaaaAAAAaAaaAAaAaaAaaAaaAAaaaAaaaaaAAaaaAAAa point 0 nongenic -81 upstream W05B5.3b.1 450 CB6648_redo I 13059695 1 C A 255 1.00 63 62 0 44 44 @AaaaAAAAaAaaAAaAaaAaaAaaAAaaaAaaaaaAAaaaAAAa point 0 nongenic 2416 into W05B5.3a,W05B5.3b.2 453 CB6648_redo I 13168446 1 C G 255 1.00 63 62 0 50 50 @GGGggGGgGggGgGgGggGGgggggggGgggggGGggggggGgggGgGgg point 0 missense CAC->GAC[His->Asp] F22G12.5 453 CB6648_redo I 13168446 1 C G 255 1.00 63 62 0 50 50 @GGGggGGgGggGgGgGggGGgggggggGgggggGGggggggGgggGgGgg point 0 SNP none haw13520 456 CB6648_redo I 13419807 1 T A 255 1.00 63 62 0 29 29 @AaaaAaaaaAAaaAAaaAaAaAaaAAaaA point 0 SNP none haw14087 457 CB6648_redo I 13482732 1 G T 255 1.31 63 62 0 21 21 @tTtTtTtTTTTTTTtttTttT point 0 nongenic -6815 upstream Y48G10A.1.1 457 CB6648_redo I 13482732 1 G T 255 1.31 63 62 0 21 21 @tTtTtTtTTTTTTTtttTttT point 0 nongenic -8558 upstream Y48G10A.3 457 CB6648_redo I 13482732 1 G T 255 1.31 63 62 0 21 21 @tTtTtTtTTTTTTTtttTttT point 0 nongenic 4661 into Y48G10A.2 460 CB6648_redo I 13529943 1 T G 30 2.00 63 12 0 4 4 @gggG point 0 nongenic -4789 upstream Y87G2A.2 460 CB6648_redo I 13529943 1 T G 30 2.00 63 12 0 4 4 @gggG point 0 nongenic 1250 into Y87G2A.20 461 CB6648_redo I 13529944 1 T G 13 2.00 63 30 0 4 4 @cgGg point 0 nongenic -4788 upstream Y87G2A.2 461 CB6648_redo I 13529944 1 T G 13 2.00 63 30 0 4 4 @cgGg point 0 nongenic 1251 into Y87G2A.20 463 CB6648_redo I 13545462 1 T C 82 2.69 63 62 0 6 6 @cccCCc point 0 nongenic -285 upstream Y87G2A.4 464 CB6648_redo I 13553337 1 T A 255 1.00 63 62 0 36 36 @AAAaAaaaAAaAAaAAAAaAaaAaaAAaAAAaAaAa point 0 nongenic -7178 upstream Y87G2A.16 464 CB6648_redo I 13553337 1 T A 255 1.00 63 62 0 36 36 @AAAaAaaaAAaAAaAAAAaAaaAaaAAaAAAaAaAa point 0 nongenic -8160 upstream Y87G2A.4 464 CB6648_redo I 13553337 1 T A 255 1.00 63 62 0 36 36 @AAAaAaaaAAaAAaAAAAaAaaAaaAAaAAAaAaAa point 0 nongenic 5276 into Y87G2A.5 467 CB6648_redo I 13584208 1 A C 255 2.81 63 62 0 38 38 @ccCccccccCCcccCCcccCCcccCCCCCcCcccCCCC point 0 nongenic 1077 into Y87G2A.9 4033 CB6648_redo I 13768972 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @..,,..TT indel 0 inframe none Y6B3B.4 470 CB6648_redo I 13860804 1 C T 255 1.00 63 62 0 39 39 @TttTTtGtTTtTtttTTGtttttttTTtttTTttttTTT point 0 SNP none haw14642 471 CB6648_redo I 13860835 1 G C 255 1.00 63 62 0 40 40 @cccCCcccCCccccCCCCcccCCccCCCCCcccCCCCCcC point 0 SNP none haw14643 473 CB6648_redo I 13985036 1 A G 255 1.00 63 62 0 31 31 @gGggGggggggGgGggGGGGGGGGggggGGg point 0 missense AAA->GAA[Lys->Glu] Y71A12B.17 473 CB6648_redo I 13985036 1 A G 255 1.00 63 62 0 31 31 @gGggGggggggGgGggGGGGGGGGggggGGg point 0 SNP none haw14760 474 CB6648_redo I 14002230 1 T G 50 4.88 63 62 23 30 53 @GGGGG,gggGgGg.,GGG..GGGg,,g,GgGG,G,,,g,,,,,,,G,G,g,G, point 0 nongenic -2215 upstream Y71A12B.12a.1 476 CB6648_redo I 14002390 1 T G 246 7.88 63 62 29 66 95 @G,AGG..GGGGGAGGGG.......GG,G......GGGGG...,.......AGggg,gAAGgGGgGgGgGgGGgggggggggGggggGgGgggGGG point 0 SNP none haw14764 477 CB6648_redo I 14049137 1 T C 255 1.00 63 62 0 33 33 @CcCcccCcccCCcCCcCCCCCCCCCccCcCccc point 0 SNP none uCE1-1488 479 CB6648_redo I 14097922 1 T C 255 1.00 63 62 0 32 32 @cCCCCcccCCCCcCCCccccccCccccCcccc point 0 nongenic -1588 upstream Y63D3A.2 479 CB6648_redo I 14097922 1 T C 255 1.00 63 62 0 32 32 @cCCCCcccCCCCcCCCccccccCccccCcccc point 0 nongenic -3341 upstream Y63D3A.5.1 479 CB6648_redo I 14097922 1 T C 255 1.00 63 62 0 32 32 @cCCCCcccCCCCcCCCccccccCccccCcccc point 0 nongenic 381 into Y63D3A.4 480 CB6648_redo I 14137809 1 A C 36 1.00 63 62 2 7 9 @tcc.gc.cc point 0 nongenic 4383 into K03D10.1 160786 CB6648_redo I 14137985 67 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 4140 to 4207 bp into K03D10.1 486 CB6648_redo I 14138265 1 T C 36 1.00 63 20 0 5 5 @CCCCC point 0 nongenic 3927 into K03D10.1 487 CB6648_redo I 14169346 1 A C 81 1.00 63 34 3 6 9 @CcCcCc,.. point 0 nongenic -2504 upstream C37A5.11 488 CB6648_redo I 14169348 1 T A 35 1.00 63 62 4 5 9 @aAaAa,... point 0 nongenic -2502 upstream C37A5.11 489 CB6648_redo I 14244891 1 G C 100 1.00 63 62 0 4 4 @cccC point 0 nongenic -1323 upstream C49A1.6 489 CB6648_redo I 14244891 1 G C 100 1.00 63 62 0 4 4 @cccC point 0 nongenic -471 upstream C49A1.10 490 CB6648_redo I 14326084 1 C T 233 3.44 63 62 0 16 16 @tttttttttttttttt point 0 nongenic -4987 upstream F49B2.6 490 CB6648_redo I 14326084 1 C T 233 3.44 63 62 0 16 16 @tttttttttttttttt point 0 nongenic 2830 into F49B2.5 493 CB6648_redo I 14347419 1 C A 255 1.00 63 62 0 17 17 @aAAaAAaAaaaaAaaAA point 0 nongenic -3626 upstream Y105E8A.1 493 CB6648_redo I 14347419 1 C A 255 1.00 63 62 0 17 17 @aAAaAAaAaaaaAaaAA point 0 nongenic 81 downstream Y105E8A.2 494 CB6648_redo I 14349944 1 A C 27 1.00 63 20 3 4 7 @.,,CCCC point 0 nongenic -6151 upstream Y105E8A.1 494 CB6648_redo I 14349944 1 A C 27 1.00 63 20 3 4 7 @.,,CCCC point 0 nongenic -8566 upstream Y105E8A.3 494 CB6648_redo I 14349944 1 A C 27 1.00 63 20 3 4 7 @.,,CCCC point 0 nongenic 2444 into Y105E8A.2 501 CB6648_redo I 14362092 1 G T 255 1.00 63 62 0 44 44 @TTTttttTTttttTTTTttTttTTtTtTTTTtttttTttTTTtt point 0 SNP none haw15184 502 CB6648_redo I 14363822 1 A T 255 4.69 63 62 0 38 38 @ttTttTtttttttTttTttTTTtttTtTtttTTTTttT point 0 nongenic -5509 upstream Y105E8A.2 502 CB6648_redo I 14363822 1 A T 255 4.69 63 62 0 38 38 @ttTttTtttttttTttTttTTTtttTtTtttTTTTttT point 0 nongenic 3757 into Y105E8A.3 503 CB6648_redo I 14363832 1 T C 255 4.25 63 62 0 37 37 @cccccccCccCccCCCcccCcCcccCCCCccCCCCcc point 0 nongenic -5519 upstream Y105E8A.2 503 CB6648_redo I 14363832 1 T C 255 4.25 63 62 0 37 37 @cccccccCccCccCCCcccCcCcccCCCCccCCCCcc point 0 nongenic 3747 into Y105E8A.3 160788 CB6648_redo I 14391797 65 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1477 to 1542 bp into Y105E8A.7a,Y105E8A.7b 160789 CB6648_redo I 14425421 266 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3021 to 3287 bp into Y105E8A.10c.1 160789 CB6648_redo I 14425421 266 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3254 to 3520 bp into Y105E8A.10b 160789 CB6648_redo I 14425421 266 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 7193 to 7459 bp into Y105E8A.10c.2 160789 CB6648_redo I 14425421 266 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 7237 to 7503 bp into Y105E8A.10a 507 CB6648_redo I 14431046 1 C A 255 1.00 63 62 0 19 19 @AaaAAaAAaaaAaaAAAaA point 0 SNP none haw15294 512 CB6648_redo I 14480479 1 G A 255 1.00 63 62 0 39 39 @aAAAAAAAAAAaAAAAAaAAAaaAaaAaaaAaaAAAAaa point 0 SNP none haw15337 513 CB6648_redo I 14518026 1 C G 255 1.38 63 62 0 37 37 @GgGggGGGGGGGgGgGgGGGggggGGGGgGGGgGGGG point 0 SNP none haw15420 514 CB6648_redo I 14574065 1 A G 255 1.94 63 62 0 41 41 @GGGgggGggggGGGgGggGGGGGGggGGGggggGGgGGGgg point 0 nongenic -8233 upstream Y105E8A.23a,Y105E8A.23b 514 CB6648_redo I 14574065 1 A G 255 1.94 63 62 0 41 41 @GGGgggGggggGGGgGggGGGGGGggGGGggggGGgGGGgg point 0 nongenic 4561 into Y105E8A.24b 514 CB6648_redo I 14574065 1 A G 255 1.94 63 62 0 41 41 @GGGgggGggggGGGgGggGGGGGGggGGGggggGGgGGGgg point 0 nongenic 6747 into Y105E8A.24a 515 CB6648_redo I 14586339 1 A C 255 1.00 63 62 0 31 31 @CCcCccCcCcCCCCCcccCcCCcCCcccCcc point 0 SNP none haw15496 516 CB6648_redo I 14610358 1 C T 252 2.19 63 62 0 31 31 @ttttttttttttttttttttttttttttttT point 0 nongenic -6231 upstream Y105E8A.25 517 CB6648_redo I 14610387 1 G C 242 1.31 63 62 0 18 18 @ccccccccccCCCCCCCc point 0 nongenic -6260 upstream Y105E8A.25 518 CB6648_redo I 14610397 1 G A 85 1.94 63 18 0 18 18 @aaaAAAAAAAaaaaaaaa point 0 nongenic -6270 upstream Y105E8A.25 519 CB6648_redo I 14610399 1 C T 18 2.06 63 54 0 16 16 @TTTTGTTtttttgttt point 0 nongenic -6272 upstream Y105E8A.25 520 CB6648_redo I 14610406 1 A G 159 1.88 63 62 0 17 17 @GGGGGGgggggggggGG point 0 nongenic -6279 upstream Y105E8A.25 521 CB6648_redo I 14610408 1 T C 205 1.75 63 62 0 19 19 @CCCCCCcccccccccCCCc point 0 nongenic -6281 upstream Y105E8A.25 522 CB6648_redo I 14610447 1 A G 255 1.06 63 62 0 28 28 @gGGGggGgGGGGGGGGGGGGGGGGGGGG point 0 nongenic -6320 upstream Y105E8A.25 523 CB6648_redo I 14675915 1 A T 255 1.00 63 62 0 46 46 @TTtTTTNTTtttTtttTTttTtTtTTTTTTTTttTTttTtTttttT point 0 SNP none haw15602 524 CB6648_redo I 14685394 1 G T 160 9.94 63 62 1 20 21 @,TTTTtttTTtTTTtttTtTt point 0 nongenic -2843 upstream Y105E8B.9 527 CB6648_redo I 14918627 1 A C 255 1.00 63 62 0 26 26 @cccCCccCCcCCcCcCCcccCccCCc point 0 SNP none haw15977 528 CB6648_redo I 14952119 1 A C 21 1.00 63 20 2 3 5 @CCC.. point 0 nongenic -1355 upstream ZK909.3.1 528 CB6648_redo I 14952119 1 A C 21 1.00 63 20 2 3 5 @CCC.. point 0 nongenic 564 downstream ZK909.2a,ZK909.2f,ZK909.2g,ZK909.2h.1,ZK909.2h.2,ZK909.2l,ZK909.2m 528 CB6648_redo I 14952119 1 A C 21 1.00 63 20 2 3 5 @CCC.. point 0 nongenic 680 downstream ZK909.2j 529 CB6648_redo I 15040328 1 T C 255 1.00 63 62 0 25 25 @cccccCCCCcCCCCCcCCCccCccc point 0 silent ATT->ATC[Ile->Ile] F31C3.2a,F31C3.2b 529 CB6648_redo I 15040328 1 T C 255 1.00 63 62 0 25 25 @cccccCCCCcCCCCCcCCCccCccc point 0 SNP none haw16048 530 CB6648_redo I 15067997 1 A G 255 1.38 63 62 2 253 255 @GGGGGGGtgGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGtGGGGGGGGGGGGGGGGGGGGGGGGGGGgGGGGGG point 0 ncRNA none F31C3.9 530 CB6648_redo I 15067997 1 A G 255 1.38 63 62 2 253 255 @GGGGGGGtgGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGtGGGGGGGGGGGGGGGGGGGGGGGGGGGgGGGGGG point 0 SNP none snp_F31C3[4] 550 CB6648_redo I 15071578 1 C G 12 3.00 0 12 0 4 4 @GGGG point 0 nongenic -12587 upstream F31C3.6a 551 CB6648_redo I 15071623 1 G A 3 2.75 0 2 0 21 21 @AATAAAAAAAAAAAAAAAAAA point 0 nongenic -12632 upstream F31C3.6a 552 CB6648_redo I 15071625 1 C G 3 2.69 0 2 0 22 22 @GGTGGGGGGGGGGGGGGGGGGG point 0 nongenic -12634 upstream F31C3.6a 553 CB6648_redo I 15071631 1 A G 3 2.62 0 2 0 19 19 @GGGGGGTGGGTGGGGGGGG point 0 nongenic -12640 upstream F31C3.6a 554 CB6648_redo I 15071665 1 A G 16 2.75 0 0 0 9 9 @GGGGGGGGG point 0 nongenic -12674 upstream F31C3.6a 555 CB6648_redo I 15071666 1 G A 16 2.75 0 0 0 9 9 @AAAAAAAAA point 0 nongenic -12675 upstream F31C3.6a 556 CB6648_redo I 15071667 1 A G 16 2.75 0 2 0 9 9 @GGGGGGGGG point 0 nongenic -12676 upstream F31C3.6a 557 CB6648_redo I 15071668 1 G A 3 2.75 0 16 1 8 9 @AAAAAAA,A point 0 nongenic -12677 upstream F31C3.6a 558 CB6648_redo I 15071671 1 C G 16 2.75 0 2 0 9 9 @GGGGGGGGG point 0 nongenic -12680 upstream F31C3.6a 559 CB6648_redo I 15071724 1 A G 3 3.88 19 2 1 148 149 @GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG point 0 nongenic -12733 upstream F31C3.6a 4037 CB6648_redo I 15071784 0 X X -1000 -999.99 -1000 -1000 185 -182 3 @,,,,,,,C,,,,,,,,,,C,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, indel 4 nongenic -12793 upstream F31C3.6a 160792 CB6648_redo II 503921 680 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1413 to 2093 bp into T27A1.1 560 CB6648_redo II 505421 1 G C 18 1.00 63 38 4 9 13 @CCCCCccCC.,.. point 0 nongenic 593 into T27A1.1 4040 CB6648_redo II 595628 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @,,....aa indel 0 nongenic -300 downstream W04H10.3a,W04H10.3b.3 4040 CB6648_redo II 595628 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @,,....aa indel 0 nongenic -419 downstream W04H10.3b.2 4040 CB6648_redo II 595628 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @,,....aa indel 0 nongenic -423 downstream W04H10.3b.1 4040 CB6648_redo II 595628 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @,,....aa indel 0 nongenic -926 upstream W08F4.11 4040 CB6648_redo II 595628 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @,,....aa indel 0 nongenic -9849 upstream W04H10.2 562 CB6648_redo II 595629 1 G T 8 1.00 63 62 3 6 9 @TTtttt... point 0 nongenic -927 upstream W08F4.11 562 CB6648_redo II 595629 1 G T 8 1.00 63 62 3 6 9 @TTtttt... point 0 nongenic -9847 upstream W04H10.2 562 CB6648_redo II 595629 1 G T 8 1.00 63 62 3 6 9 @TTtttt... point 0 nongenic 302 into W04H10.3a,W04H10.3b.3 562 CB6648_redo II 595629 1 G T 8 1.00 63 62 3 6 9 @TTtttt... point 0 nongenic 421 into W04H10.3b.2 562 CB6648_redo II 595629 1 G T 8 1.00 63 62 3 6 9 @TTtttt... point 0 nongenic 425 into W04H10.3b.1 577 CB6648_redo II 777128 1 G A 255 1.75 63 62 0 30 30 @aAAAAaAaAAAaAAaAaaaaaaAaaAaAaA point 0 nongenic 406 downstream Y39F10A.1 579 CB6648_redo II 935804 1 A G 255 1.00 63 62 0 34 34 @gGGGGgGGgGggGgGGGgGgGggggGggGGGggG point 0 silent AAA->AAG[Lys->Lys] R07C3.4 580 CB6648_redo II 959061 1 A T 255 1.00 63 62 0 52 52 @TtTttTtttttTtTttTTTTtTtttTttttttTTtttTTTTTTTTTtTtTTt point 0 nongenic -1472 upstream C32B5.7 580 CB6648_redo II 959061 1 A T 255 1.00 63 62 0 52 52 @TtTttTtttttTtTttTTTTtTtttTttttttTTtttTTTTTTTTTtTtTTt point 0 nongenic 95 into C32B5.16 582 CB6648_redo II 1221570 1 T G 23 1.00 63 62 7 7 14 @,,,,,,.GgGgGGg point 0 nongenic -2786 upstream F53A10.2c 582 CB6648_redo II 1221570 1 T G 23 1.00 63 62 7 7 14 @,,,,,,.GgGgGGg point 0 nongenic 9217 into F53A10.2a 583 CB6648_redo II 1221572 1 G A 69 1.00 63 22 6 8 14 @,,,,,.AaAaAAaa point 0 SNP none haw17694 584 CB6648_redo II 1323342 1 T C 3 1.00 63 62 3 4 7 @CCCC.., point 0 nongenic -3658 upstream F56D12.4a 584 CB6648_redo II 1323342 1 T C 3 1.00 63 62 3 4 7 @CCCC.., point 0 nongenic 248 downstream F56D12.5a.1 584 CB6648_redo II 1323342 1 T C 3 1.00 63 62 3 4 7 @CCCC.., point 0 nongenic 474 downstream F56D12.5b 585 CB6648_redo II 1333323 1 C G 255 1.44 63 62 0 29 29 @gggggGgGggGggGggggGGGGgGGGGGG point 0 nongenic -3747 upstream F56D12.4b,F56D12.4c.2 585 CB6648_redo II 1333323 1 C G 255 1.44 63 62 0 29 29 @gggggGgGggGggGggggGGGGgGGGGGG point 0 nongenic 6323 into F56D12.4a 586 CB6648_redo II 1392498 1 T C 255 1.00 63 62 0 43 43 @cCCccCcccCCCcccccccccCcCCcccCccccccccCccccC point 0 nongenic 924 downstream F54D12.3 586 CB6648_redo II 1392498 1 T C 255 1.00 63 62 0 43 43 @cCCccCcccCCCcccccccccCcCCcccCccccccccCccccC point 0 nongenic 995 downstream F54D12.11 593 CB6648_redo II 1605235 1 C T 66 3.94 63 62 25 73 98 @TTtTTt...t...t,T..TTtttttT.tt.ttt.tttt,...ttttt.ttTttttttt.tTtttttttttttttt.ttttttttt.ttttt...t..T point 0 nongenic 566 into C08E3.3 593 CB6648_redo II 1605235 1 C T 66 3.94 63 62 25 73 98 @TTtTTt...t...t,T..TTtttttT.tt.ttt.tttt,...ttttt.ttTttttttt.tTtttttttttttttt.ttttttttt.ttttt...t..T point 0 nongenic 620 downstream T07H3.1 594 CB6648_redo II 1637578 1 C G 255 1.00 63 62 0 21 21 @gGGGGgGgggGGggGggGGGG point 0 nongenic 884 into ZC204.4a,ZC204.4b 595 CB6648_redo II 1637579 1 G C 255 1.00 63 62 0 21 21 @cCCCCcCcccCCccCccCCCC point 0 nongenic 885 into ZC204.4a,ZC204.4b 596 CB6648_redo II 1804984 1 T A 255 10.00 63 62 0 47 47 @aAAAaAAAAaAaAAaaaaaaaaaaaaaaaaaaaaAaaaaAaaaaAAa point 0 nongenic 825 into C08F1.8 597 CB6648_redo II 1848045 1 G C 73 1.00 63 62 1 7 8 @,ccccccc point 0 missense CCC->GCC[Pro->Ala] C52E2.6 598 CB6648_redo II 1850708 1 T C 255 1.00 63 62 0 45 45 @cCcCccCccCccccCCcCccCcccCCcCCCcCCCCcccCCccCcc point 0 nongenic -307 upstream C52E2.7 598 CB6648_redo II 1850708 1 T C 255 1.00 63 62 0 45 45 @cCcCccCccCccccCCcCccCcccCCcCCCcCCCCcccCCccCcc point 0 nongenic -537 upstream C52E2.3 4046 CB6648_redo II 1862307 1 X X -1000 -999.99 -1000 -1000 6 -4 2 @,...t.ttttttT. indel -1 nongenic -328 upstream C16C4.6 4046 CB6648_redo II 1862307 1 X X -1000 -999.99 -1000 -1000 6 -4 2 @,...t.ttttttT. indel -1 nongenic 899 downstream C16C4.7 601 CB6648_redo II 1862310 1 A C 32 1.94 63 12 5 9 14 @cccc.t.cc.,cc. point 0 nongenic -325 upstream C16C4.6 601 CB6648_redo II 1862310 1 A C 32 1.94 63 12 5 9 14 @cccc.t.cc.,cc. point 0 nongenic 902 downstream C16C4.7 4047 CB6648_redo II 1906690 0 X X -1000 -999.99 -1000 -1000 10 0 10 @..,,,..,,,GGg indel 0 nongenic -1473 upstream F52C6.5 4047 CB6648_redo II 1906690 0 X X -1000 -999.99 -1000 -1000 10 0 10 @..,,,..,,,GGg indel 0 nongenic 628 downstream C46F9.1 602 CB6648_redo II 1906691 1 G T 32 1.62 63 22 5 10 15 @ttTTTttTTT,,... point 0 nongenic -1471 upstream F52C6.5 602 CB6648_redo II 1906691 1 G T 32 1.62 63 22 5 10 15 @ttTTTttTTT,,... point 0 nongenic 629 downstream C46F9.1 603 CB6648_redo II 1926841 1 T C 69 1.00 63 2 1 4 5 @cCCC. point 0 silent GCT->GCC[Ala->Ala] F52C6.2.1,F52C6.2.2,F52C6.2.3,F52C6.2.4 604 CB6648_redo II 1926842 1 C T 40 1.00 63 2 2 3 5 @tT,T. point 0 missense CCG->TCG[Pro->Ser] F52C6.2.1,F52C6.2.2,F52C6.2.3,F52C6.2.4 605 CB6648_redo II 1926844 1 G C 3 1.00 63 40 1 3 4 @CCC. point 0 silent CCG->CCC[Pro->Pro] F52C6.2.1,F52C6.2.2,F52C6.2.3,F52C6.2.4 607 CB6648_redo II 2001658 1 A C 237 2.00 63 62 2 28 30 @cCCcCC.cccCCccCCccccCCcC.CccCC point 0 nongenic -1719 upstream F59H6.5 607 CB6648_redo II 2001658 1 A C 237 2.00 63 62 2 28 30 @cCCcCC.cccCCccCCccccCCcC.CccCC point 0 nongenic -836 upstream C40D2.4 4048 CB6648_redo II 2037271 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,,,Ttt indel 0 nongenic -1483 downstream F59H6.1 610 CB6648_redo II 2190806 1 T C 255 1.00 63 62 0 54 54 @ccccCCCCCCcCcCCccCccCccCccCCcCcCcCCcCCCccccCCCCCcccccC point 0 nongenic -1347 upstream C33C12.9 611 CB6648_redo II 2225250 1 G T 154 2.19 63 62 0 11 11 @TTtttTTTTTT point 0 nongenic -1708 upstream F54A3.4 611 CB6648_redo II 2225250 1 G T 154 2.19 63 62 0 11 11 @TTtttTTTTTT point 0 nongenic 460 into F54A3.5.2 611 CB6648_redo II 2225250 1 G T 154 2.19 63 62 0 11 11 @TTtttTTTTTT point 0 nongenic 462 into F54A3.5.1 611 CB6648_redo II 2225250 1 G T 154 2.19 63 62 0 11 11 @TTtttTTTTTT point 0 nongenic 569 downstream F54A3.6 612 CB6648_redo II 2225256 1 A T 78 1.75 63 62 0 4 4 @TTTt point 0 nongenic -1714 upstream F54A3.4 612 CB6648_redo II 2225256 1 A T 78 1.75 63 62 0 4 4 @TTTt point 0 nongenic 454 into F54A3.5.2 612 CB6648_redo II 2225256 1 A T 78 1.75 63 62 0 4 4 @TTTt point 0 nongenic 456 into F54A3.5.1 612 CB6648_redo II 2225256 1 A T 78 1.75 63 62 0 4 4 @TTTt point 0 nongenic 563 downstream F54A3.6 614 CB6648_redo II 2225263 1 A C 40 1.00 63 10 0 7 7 @tcccccc point 0 nongenic -1721 upstream F54A3.4 614 CB6648_redo II 2225263 1 A C 40 1.00 63 10 0 7 7 @tcccccc point 0 nongenic 447 into F54A3.5.2 614 CB6648_redo II 2225263 1 A C 40 1.00 63 10 0 7 7 @tcccccc point 0 nongenic 449 into F54A3.5.1 614 CB6648_redo II 2225263 1 A C 40 1.00 63 10 0 7 7 @tcccccc point 0 nongenic 556 downstream F54A3.6 615 CB6648_redo II 2225268 1 G T 150 1.00 63 34 0 18 18 @ttttttttttTtTTcttt point 0 nongenic -1726 upstream F54A3.4 615 CB6648_redo II 2225268 1 G T 150 1.00 63 34 0 18 18 @ttttttttttTtTTcttt point 0 nongenic 442 into F54A3.5.2 615 CB6648_redo II 2225268 1 G T 150 1.00 63 34 0 18 18 @ttttttttttTtTTcttt point 0 nongenic 444 into F54A3.5.1 615 CB6648_redo II 2225268 1 G T 150 1.00 63 34 0 18 18 @ttttttttttTtTTcttt point 0 nongenic 551 downstream F54A3.6 616 CB6648_redo II 2225271 1 A C 185 1.00 63 62 1 22 23 @cccccctc.cCcCCtcccccCtc point 0 nongenic -1729 upstream F54A3.4 616 CB6648_redo II 2225271 1 A C 185 1.00 63 62 1 22 23 @cccccctc.cCcCCtcccccCtc point 0 nongenic 439 into F54A3.5.2 616 CB6648_redo II 2225271 1 A C 185 1.00 63 62 1 22 23 @cccccctc.cCcCCtcccccCtc point 0 nongenic 441 into F54A3.5.1 616 CB6648_redo II 2225271 1 A C 185 1.00 63 62 1 22 23 @cccccctc.cCcCCtcccccCtc point 0 nongenic 548 downstream F54A3.6 617 CB6648_redo II 2472169 1 C T 235 1.00 63 62 0 26 26 @tttttttttttttttttttttttttt point 0 SNP none haw20431 4052 CB6648_redo II 2678738 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @,,,,Aa indel 0 inframe none F22E5.17 621 CB6648_redo II 2703217 1 C T 255 1.00 63 62 0 26 26 @TttttTttttTTTttttTTttttTTt point 0 nongenic -359 upstream Y47G7B.3 621 CB6648_redo II 2703217 1 C T 255 1.00 63 62 0 26 26 @TttttTttttTTTttttTTttttTTt point 0 nongenic 203 downstream Y47G7B.1 624 CB6648_redo II 2799760 1 A T 205 1.00 63 62 0 8 8 @TTtTTTTT point 0 SNP none haw21113 625 CB6648_redo II 2843349 1 G C 77 1.00 63 62 2 4 6 @c,cCC. point 0 nongenic -161 upstream Y110A2AL.7 626 CB6648_redo II 2881248 1 A G 25 1.00 63 20 7 10 17 @gggggggggg,,,,,,, point 0 nongenic 2296 into Y110A2AL.12a 626 CB6648_redo II 2881248 1 A G 25 1.00 63 20 7 10 17 @gggggggggg,,,,,,, point 0 nongenic 678 into Y110A2AL.12b 627 CB6648_redo II 2881249 1 T C 20 1.00 63 24 7 9 16 @ccccccccc,,,,,,, point 0 nongenic 2297 into Y110A2AL.12a 627 CB6648_redo II 2881249 1 T C 20 1.00 63 24 7 9 16 @ccccccccc,,,,,,, point 0 nongenic 677 into Y110A2AL.12b 628 CB6648_redo II 2881289 1 T G 15 1.00 63 0 0 6 6 @GGGGGG point 0 nongenic 2337 into Y110A2AL.12a 628 CB6648_redo II 2881289 1 T G 15 1.00 63 0 0 6 6 @GGGGGG point 0 nongenic 637 into Y110A2AL.12b 629 CB6648_redo II 2897370 1 A G 3 4.69 0 2 1 33 34 @ggggggg,gggggggggggggggggggggggggg point 0 nongenic -2975 upstream Y110A2AL.14.1 629 CB6648_redo II 2897370 1 A G 3 4.69 0 2 1 33 34 @ggggggg,gggggggggggggggggggggggggg point 0 nongenic 637 into Y110A2AM.3 632 CB6648_redo II 2897879 1 A T 111 5.31 63 62 57 198 255 @T,.tT,ttTtt,ttttttt,,t.tTttttttttttttttt,ttttt.t.ttttTt.tt.t.tTttttTttttt,ttttttt,ttttttttt,tttt,,t point 0 SNP none haw21398 633 CB6648_redo II 2897887 1 T G 60 7.12 63 62 57 185 242 @ggggggGg.gg.g.gGggggGggggg,ggggggg,ggggggggg,gggg,,gggggggg.ggggg,,gggG.ggggg,ggggggg,,ggggggggg,gg point 0 nongenic -3492 upstream Y110A2AL.14.1 633 CB6648_redo II 2897887 1 T G 60 7.12 63 62 57 185 242 @ggggggGg.gg.g.gGggggGggggg,ggggggg,ggggggggg,gggg,,gggggggg.ggggg,,gggG.ggggg,ggggggg,,ggggggggg,gg point 0 nongenic 1154 into Y110A2AM.3 634 CB6648_redo II 2898896 1 T A 123 1.69 63 62 62 77 139 @,,,,a,,,,,,,,,.aa,A.a,,aaaA,a.,,,,aaaa,,a,,a,,aa,A,,aaaA,aa,,,aaaaaaaa,a,,aa,AaAa,aaaaa,aaaaaa,aaaa point 0 nongenic -4501 upstream Y110A2AL.14.1 634 CB6648_redo II 2898896 1 T A 123 1.69 63 62 62 77 139 @,,,,a,,,,,,,,,.aa,A.a,,aaaA,a.,,,,aaaa,,a,,a,,aa,A,,aaaA,aa,,,aaaaaaaa,a,,aa,AaAa,aaaaa,aaaaaa,aaaa point 0 nongenic 1450 into Y110A2AM.3 635 CB6648_redo II 2900766 1 A T 201 1.00 63 62 0 6 6 @tTTTtt point 0 three_prime_UTR none Y110A2AM.4 160794 CB6648_redo II 2900776 82 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 226 to 308 bp into Y110A2AM.4 637 CB6648_redo II 2900872 1 C A 255 1.00 63 62 0 25 25 @AAAAaAaaAAAAaaAaAAAAaAaAa point 0 three_prime_UTR none Y110A2AM.4 638 CB6648_redo II 2900873 1 G T 255 1.00 63 62 0 26 26 @TTTTtTttTTTTttTtTTTTtTtTtt point 0 three_prime_UTR none Y110A2AM.4 640 CB6648_redo II 2912494 1 A T 154 2.56 63 62 0 12 12 @TTTttTtTTTtt point 0 nongenic -8495 upstream Y110A2AM.1 640 CB6648_redo II 2912494 1 A T 154 2.56 63 62 0 12 12 @TTTttTtTTTtt point 0 nongenic 1079 into Y110A2AR.2 646 CB6648_redo II 3219429 1 G T 18 1.00 63 48 3 3 6 @ttt,,, point 0 nongenic 443 downstream ZC239.2 4055 CB6648_redo II 3241681 0 X X -1000 -999.99 -1000 -1000 5 1 6 @.....GgGgg indel 0 three_prime_UTR none C17F4.3 649 CB6648_redo II 3278964 1 T A 255 1.00 63 62 0 37 37 @aAAaaaAaAAAAaaaaaAAaAAAAaaaAAAAAAAAaA point 0 SNP none haw22209 658 CB6648_redo II 3532191 1 G C 255 4.00 63 62 0 33 33 @cCcccccCcccCcCCCCCCCCCCCCCCCCCCCC point 0 nongenic -3680 upstream W09G10.3 658 CB6648_redo II 3532191 1 G C 255 4.00 63 62 0 33 33 @cCcccccCcccCcCCCCCCCCCCCCCCCCCCCC point 0 nongenic 404 downstream W09G10.4a 658 CB6648_redo II 3532191 1 G C 255 4.00 63 62 0 33 33 @cCcccccCcccCcCCCCCCCCCCCCCCCCCCCC point 0 nongenic 692 downstream W09G10.4b 660 CB6648_redo II 3650567 1 C A 255 1.00 63 62 0 52 52 @AaAAAaAaaAAAaAAaaaAAaaAAAaAaaAaAaAaAaaaAAaaaaAaaAAAA point 0 nongenic -682 upstream F19B10.11 661 CB6648_redo II 3796556 1 C T 108 2.00 63 62 40 215 255 @,..g,gGgtTttgTtt,,.gtgggtTTg.g,gg.tg,..,ggTT,Ttt,tgTttTtttgt,TTtttgT,tGTTTgtttgTTTGT,T,TGTGTGTg.TT, point 0 silent ACC->ACT[Thr->Thr] Y8A9A.2 4059 CB6648_redo II 3796666 0 X X -1000 -999.99 -1000 -1000 14 18 32 @,,,,......,...gGGGGGGGGGGGggg indel 0 inframe none Y8A9A.2 664 CB6648_redo II 3797014 1 T C 35 3.00 45 36 1 6 7 @cccccc, point 0 missense CTG->CCG[Leu->Pro] Y8A9A.2 665 CB6648_redo II 3797059 1 C T 38 4.38 37 62 16 56 72 @TtttTTTtttTtttTtt.Tt.tttt..t.,,ttTtT,T,t..tttttt,tt,.t,ttttTgTTTgTtTTt,g point 0 missense CCG->CTG[Pro->Leu] Y8A9A.2 667 CB6648_redo II 3797266 1 T A 87 4.12 63 62 29 79 108 @aa,Aaaaa,AAaaAA,A,A,,a,,,AAAAA,aA,A,A.,,A,...aaaAAAaa.aAaaAAAAA,aa,AAAAA....AAAAaa.aAAAAaa,AAAAAA,A point 0 missense CTG->CAG[Leu->Gln] Y8A9A.2 668 CB6648_redo II 3797353 1 A T 255 3.75 63 62 28 78 106 @T.tt.T,..TTtTTTTTt.T.t.,TTTTT.T.TTTT.t.T.TT..T.Ttt.tTTtTTtttttTTTt,tttttTTTtttTttTttttTtTT...tTt..t point 0 missense CAT->CTT[His->Leu] Y8A9A.2 669 CB6648_redo II 4142478 1 C G 255 1.00 63 62 0 19 19 @GGgGGggGGGGGGGgGGgG point 0 nongenic -331 upstream F56D3.1.2 670 CB6648_redo II 4142481 1 G A 255 1.00 63 62 0 24 24 @AaAAaaAAAAAAAaAAaAaAAAAa point 0 nongenic -328 upstream F56D3.1.2 671 CB6648_redo II 4142501 1 A T 255 1.00 63 62 0 29 29 @tTTTTtTtTtttTttttTTTTTttTTTTT point 0 nongenic -308 upstream F56D3.1.2 672 CB6648_redo II 4260994 1 T C 3 8.06 0 2 6 33 39 @.cccccccccccccccccccccc,cccccc.,,cc,ccc point 0 nongenic -15212 upstream C01F1.4 672 CB6648_redo II 4260994 1 T C 3 8.06 0 2 6 33 39 @.cccccccccccccccccccccc,cccccc.,,cc,ccc point 0 nongenic -2218 upstream C16A11.8 4061 CB6648_redo II 4273307 0 X X -1000 -999.99 -1000 -1000 3 -2 1 @,,,CCc indel 0 nongenic -14531 upstream C16A11.8 4061 CB6648_redo II 4273307 0 X X -1000 -999.99 -1000 -1000 3 -2 1 @,,,CCc indel 0 nongenic -2900 upstream C01F1.4 673 CB6648_redo II 4296769 1 C G 65 1.00 63 10 1 5 6 @GGgGg. point 0 nongenic -1534 upstream C01F1.3b 673 CB6648_redo II 4296769 1 C G 65 1.00 63 10 1 5 6 @GGgGg. point 0 nongenic -8565 upstream C01F1.6 673 CB6648_redo II 4296769 1 C G 65 1.00 63 10 1 5 6 @GGgGg. point 0 nongenic 1676 into C01F1.3a 674 CB6648_redo II 4296770 1 A C 10 1.00 63 62 2 2 4 @Cc.. point 0 nongenic -1533 upstream C01F1.3b 674 CB6648_redo II 4296770 1 A C 10 1.00 63 62 2 2 4 @Cc.. point 0 nongenic -8566 upstream C01F1.6 674 CB6648_redo II 4296770 1 A C 10 1.00 63 62 2 2 4 @Cc.. point 0 nongenic 1677 into C01F1.3a 681 CB6648_redo II 4375086 1 A C 76 1.00 63 46 1 4 5 @cCCc. point 0 nongenic -3743 upstream B0286.1 681 CB6648_redo II 4375086 1 A C 76 1.00 63 46 1 4 5 @cCCc. point 0 nongenic -392 upstream B0286.4c.2,B0286.4c.5 681 CB6648_redo II 4375086 1 A C 76 1.00 63 46 1 4 5 @cCCc. point 0 nongenic -68 upstream B0286.4b 681 CB6648_redo II 4375086 1 A C 76 1.00 63 46 1 4 5 @cCCc. point 0 nongenic 1367 into B0286.4a.2,B0286.4c.6,B0286.4c.7,B0286.4c.8,B0286.4d 681 CB6648_redo II 4375086 1 A C 76 1.00 63 46 1 4 5 @cCCc. point 0 nongenic 1636 into B0286.4a.1 681 CB6648_redo II 4375086 1 A C 76 1.00 63 46 1 4 5 @cCCc. point 0 nongenic 1651 into B0286.4c.3,B0286.4c.4 681 CB6648_redo II 4375086 1 A C 76 1.00 63 46 1 4 5 @cCCc. point 0 nongenic 621 into B0286.4c.1 682 CB6648_redo II 4375087 1 T A 46 1.00 63 62 2 4 6 @aAAa.. point 0 nongenic -3742 upstream B0286.1 682 CB6648_redo II 4375087 1 T A 46 1.00 63 62 2 4 6 @aAAa.. point 0 nongenic -393 upstream B0286.4c.2,B0286.4c.5 682 CB6648_redo II 4375087 1 T A 46 1.00 63 62 2 4 6 @aAAa.. point 0 nongenic -69 upstream B0286.4b 682 CB6648_redo II 4375087 1 T A 46 1.00 63 62 2 4 6 @aAAa.. point 0 nongenic 1366 into B0286.4a.2,B0286.4c.6,B0286.4c.7,B0286.4c.8,B0286.4d 682 CB6648_redo II 4375087 1 T A 46 1.00 63 62 2 4 6 @aAAa.. point 0 nongenic 1635 into B0286.4a.1 682 CB6648_redo II 4375087 1 T A 46 1.00 63 62 2 4 6 @aAAa.. point 0 nongenic 1650 into B0286.4c.3,B0286.4c.4 682 CB6648_redo II 4375087 1 T A 46 1.00 63 62 2 4 6 @aAAa.. point 0 nongenic 620 into B0286.4c.1 685 CB6648_redo II 4468036 1 G T 255 1.00 63 62 0 26 26 @TtTTTTtTTTTTtTttTTTtttTtTt point 0 SNP none haw24704 686 CB6648_redo II 4468046 1 G T 255 1.00 63 62 0 25 25 @TTTTTtTttTTTtttTtTtTTTTTT point 0 nongenic -114 upstream W06B4.2 686 CB6648_redo II 4468046 1 G T 255 1.00 63 62 0 25 25 @TTTTTtTttTTTtttTtTtTTTTTT point 0 nongenic 159 downstream W06B4.3 687 CB6648_redo II 4492564 1 T A 15 1.00 63 62 3 4 7 @AAAa,,, point 0 SNP none haw24745 688 CB6648_redo II 4499374 1 G C 255 1.00 63 62 0 24 24 @CCcCcCCcCCCCCCCcCcCccccc point 0 SNP none haw24761 691 CB6648_redo II 4642240 1 C T 105 4.69 32 4 0 11 11 @tTTTTtTttTt point 0 nongenic -3910 upstream F35D11.11a,F35D11.11b,F35D11.11c 691 CB6648_redo II 4642240 1 C T 105 4.69 32 4 0 11 11 @tTTTTtTttTt point 0 nongenic -6841 upstream Y74E4A.1b 711 CB6648_redo II 4929759 1 C A 255 1.44 63 62 1 35 36 @aaaAaaaAAAAAaaaAAaaAAAaAaAAaAA.AAaAA point 0 SNP none haw25053 712 CB6648_redo II 4964576 1 C A 255 1.00 63 62 0 26 26 @AaaaaAaaAaaAAAAaaAAaaaaaaA point 0 SNP none haw25061 713 CB6648_redo II 5021686 1 T G 30 1.00 63 62 4 5 9 @,.,,ggGGg point 0 nongenic -1061 upstream F59A6.1 4076 CB6648_redo II 5028912 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @.,,,gggG indel 0 nongenic -1056 downstream F59A6.1 716 CB6648_redo II 5078770 1 C G 31 1.00 63 0 0 4 4 @gggg point 0 three_prime_UTR none C27A2.6 718 CB6648_redo II 5079263 1 G C 65 1.00 63 14 1 8 9 @,cccCCccc point 0 silent GGC->GGG[Gly->Gly] C27A2.6 721 CB6648_redo II 5136070 1 G C 28 1.00 63 32 2 6 8 @ccCCCC,, point 0 nongenic -785 upstream F58A6.2 724 CB6648_redo II 5185654 1 G C 255 1.00 63 62 0 35 35 @CcCcCcccccCCCcCCCCCCccCCCcCCcCCCCCc point 0 missense CCT->CGT[Pro->Arg] C27D6.4c 724 CB6648_redo II 5185654 1 G C 255 1.00 63 62 0 35 35 @CcCcCcccccCCCcCCCCCCccCCCcCCcCCCCCc point 0 SNP none haw25156,uCE2-1607 725 CB6648_redo II 5203315 1 A G 43 1.00 63 14 1 3 4 @.GGG point 0 five_prime_UTR none C34F11.3a.1,C34F11.3a.2 727 CB6648_redo II 5222112 1 G T 47 1.00 63 54 1 3 4 @,ttT point 0 nongenic -2229 upstream C34F11.9b 727 CB6648_redo II 5222112 1 G T 47 1.00 63 54 1 3 4 @,ttT point 0 nongenic -7946 upstream EGAP2.2 727 CB6648_redo II 5222112 1 G T 47 1.00 63 54 1 3 4 @,ttT point 0 nongenic 3236 into C34F11.9c 727 CB6648_redo II 5222112 1 G T 47 1.00 63 54 1 3 4 @,ttT point 0 nongenic 3241 into C34F11.9a 728 CB6648_redo II 5222113 1 T C 54 1.00 63 46 1 4 5 @,ccCc point 0 nongenic -2230 upstream C34F11.9b 728 CB6648_redo II 5222113 1 T C 54 1.00 63 46 1 4 5 @,ccCc point 0 nongenic -7945 upstream EGAP2.2 728 CB6648_redo II 5222113 1 T C 54 1.00 63 46 1 4 5 @,ccCc point 0 nongenic 3235 into C34F11.9c 728 CB6648_redo II 5222113 1 T C 54 1.00 63 46 1 4 5 @,ccCc point 0 nongenic 3240 into C34F11.9a 729 CB6648_redo II 5231204 1 T G 124 1.00 63 62 0 6 6 @Gggggg point 0 SNP none haw25212 731 CB6648_redo II 5231227 1 T G 223 1.00 63 62 0 8 8 @gGgGgggG point 0 nongenic -174 upstream EGAP2.1 731 CB6648_redo II 5231227 1 T G 223 1.00 63 62 0 8 8 @gGgGgggG point 0 nongenic 747 downstream EGAP2.2 732 CB6648_redo II 5231250 1 A C 252 1.00 63 62 0 11 11 @CcCcccCcccc point 0 nongenic -151 upstream EGAP2.1 732 CB6648_redo II 5231250 1 A C 252 1.00 63 62 0 11 11 @CcCcccCcccc point 0 nongenic 770 downstream EGAP2.2 750 CB6648_redo II 5322089 1 T A 255 1.00 63 62 0 20 20 @aAAAAAaaAaAAAAAaAAAA point 0 nongenic -890 upstream F08B1.1a.3,F08B1.1c.1 751 CB6648_redo II 5571578 1 G C 255 1.00 63 62 0 39 39 @CcCcccCccCCcCccccccCCCcCcCCcCCcCccCCCCc point 0 missense GAC->CAC[Asp->His] C17C3.15 751 CB6648_redo II 5571578 1 G C 255 1.00 63 62 0 39 39 @CcCcccCccCCcCccccccCCCcCcCCcCCcCccCCCCc point 0 three_prime_UTR none C17C3.1c 754 CB6648_redo II 5635095 1 C G 255 1.00 63 62 0 30 30 @gGGGggGGGggGggGGGggggggggGgGGg point 0 missense GAA->CAA[Glu->Gln] F59E12.8 754 CB6648_redo II 5635095 1 C G 255 1.00 63 62 0 30 30 @gGGGggGGGggGggGGGggggggggGgGGg point 0 SNP none haw25459 755 CB6648_redo II 5647429 1 C T 255 1.00 63 62 0 41 41 @TtTtTttttTttTtTtTTtTtTTttTtTTTTtTtTTTTttt point 0 silent AAG->AAA[Lys->Lys] F59E12.10 755 CB6648_redo II 5647429 1 C T 255 1.00 63 62 0 41 41 @TtTtTttttTttTtTtTTtTtTTttTtTTTTtTtTTTTttt point 0 SNP none haw25466 757 CB6648_redo II 5667682 1 A G 31 1.00 63 62 2 4 6 @,,GGGG point 0 missense TTT->CTT[Phe->Leu] C25H3.7a 758 CB6648_redo II 5723522 1 G T 105 1.00 63 62 1 5 6 @,TTTTT point 0 nongenic 1178 into C18A3.6b.1 758 CB6648_redo II 5723522 1 G T 105 1.00 63 62 1 5 6 @,TTTTT point 0 nongenic 1791 into C18A3.6a,C18A3.6b.2 759 CB6648_redo II 5775940 1 C T 44 1.00 63 62 3 6 9 @TTTtTt.., point 0 nongenic -6975 upstream K05F1.6a 760 CB6648_redo II 5820841 1 G T 16 1.00 63 52 0 6 6 @tTttCC point 0 five_prime_UTR none ZK1248.3a,ZK1248.3b 761 CB6648_redo II 5846225 1 G T 122 1.00 63 62 3 8 11 @.,.TTTtttTT point 0 nongenic -376 upstream H41C03.3.1 761 CB6648_redo II 5846225 1 G T 122 1.00 63 62 3 8 11 @.,.TTTtttTT point 0 nongenic -715 upstream ZK1248.17 762 CB6648_redo II 5861709 1 G A 103 1.00 63 62 2 7 9 @,,Aaaaaaa point 0 nongenic -2452 upstream F55C12.7.1,F55C12.7.2,F55C12.7.3 762 CB6648_redo II 5861709 1 G A 103 1.00 63 62 2 7 9 @,,Aaaaaaa point 0 nongenic -3317 upstream F55C12.4 4097 CB6648_redo II 5931438 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @,,,.,.cc indel 0 nongenic -2020 upstream F28B12.2a 766 CB6648_redo II 5931439 1 T C 3 1.00 63 28 3 4 7 @CcCc... point 0 nongenic -2018 upstream F28B12.2a 768 CB6648_redo II 5960458 1 C T 255 1.00 63 62 0 38 38 @tTttttttttTtTtttttttTtttTTtttttTtTttTT point 0 SNP none haw25654 772 CB6648_redo II 6068938 1 A T 3 3.50 0 18 18 26 44 @.....,,.TTTTtTTtT.tTttTTTTT,tTtTtTTT......,. point 0 nongenic -1840 upstream H12I13.2 4104 CB6648_redo II 6084904 1 X X -1000 -999.99 -1000 -1000 5 -3 2 @,.,.. indel -1 frameshift none F21H12.4 4104 CB6648_redo II 6084904 1 X X -1000 -999.99 -1000 -1000 5 -3 2 @,.,.. indel -1 SNP none uCE2-1655 782 CB6648_redo II 6296757 1 C T 14 1.81 63 62 34 51 85 @.,..,.,,...TT,Tt,TTTtTT,T,,tTTtT,TT,TTT,TTT,TTTtTTt,TtTT,T,T.,,T,,Tt,T,tT.TTTTt,,Tt,T point 0 nongenic -2653 upstream C29F5.4a,C29F5.4b 782 CB6648_redo II 6296757 1 C T 14 1.81 63 62 34 51 85 @.,..,.,,...TT,Tt,TTTtTT,T,,tTTtT,TT,TTT,TTT,TTTtTTt,TtTT,T,T.,,T,,Tt,T,tT.TTTTt,,Tt,T point 0 nongenic 437 downstream C29F5.5 783 CB6648_redo II 6296828 1 A C 49 2.50 63 48 17 50 67 @CCc.cCCCcCCccCccccCcccccC,ccCCccCccCcCccCc,cCCcccc,CC.c..,,.,,.,,., point 0 nongenic -2724 upstream C29F5.4a,C29F5.4b 783 CB6648_redo II 6296828 1 A C 49 2.50 63 48 17 50 67 @CCc.cCCCcCCccCccccCcccccC,ccCCccCccCcCccCc,cCCcccc,CC.c..,,.,,.,,., point 0 nongenic 366 downstream C29F5.5 785 CB6648_redo II 6451387 1 A T 255 1.00 63 62 0 40 40 @TttTTttTtTttTttTtTtttttttTTTTttttTtTTttt point 0 SNP none haw25895 4110 CB6648_redo II 6500690 0 X X -1000 -999.99 -1000 -1000 3 -2 1 @..,tTtt indel 1 frameshift none R05G9.3 787 CB6648_redo II 6522778 1 A C 86 1.00 63 52 1 4 5 @.cccc point 0 nongenic -2098 upstream C56E6.2 787 CB6648_redo II 6522778 1 A C 86 1.00 63 52 1 4 5 @.cccc point 0 nongenic -2982 upstream C56E6.3a 788 CB6648_redo II 6527423 1 G A 255 1.00 63 62 0 34 34 @AAAAAaaAaAAAaAAAAaaAAAaAAAaAAAAaaA point 0 silent ATC->ATT[Ile->Ile] C56E6.4 788 CB6648_redo II 6527423 1 G A 255 1.00 63 62 0 34 34 @AAAAAaaAaAAAaAAAAaaAAAaAAAaAAAAaaA point 0 SNP none haw25905 789 CB6648_redo II 6527424 1 A T 255 1.00 63 62 0 34 34 @TTTTttTtTTTtTTTTttTTTtTTTtTTTTttTt point 0 missense ATC->AAC[Ile->Asn] C56E6.4 789 CB6648_redo II 6527424 1 A T 255 1.00 63 62 0 34 34 @TTTTttTtTTTtTTTTttTTTtTTTtTTTTttTt point 0 SNP none haw25906 4113 CB6648_redo II 6539462 1 X X -1000 -999.99 -1000 -1000 9 -7 2 @,..,,.,,. indel -1 SNP none snp_C56E6[1] 4116 CB6648_redo II 6561615 3 X X -1000 -999.99 -1000 -1000 8 -6 2 @,....,.. indel -3 SNP none uCE2-1672 4118 CB6648_redo II 6620906 0 X X -1000 -999.99 -1000 -1000 4 0 4 @....ggGg indel 0 nongenic -11600 upstream C56C10.12 4118 CB6648_redo II 6620906 0 X X -1000 -999.99 -1000 -1000 4 0 4 @....ggGg indel 0 nongenic -1194 downstream F54H5.4b 4118 CB6648_redo II 6620906 0 X X -1000 -999.99 -1000 -1000 4 0 4 @....ggGg indel 0 nongenic -1231 upstream F54H5.3 4118 CB6648_redo II 6620906 0 X X -1000 -999.99 -1000 -1000 4 0 4 @....ggGg indel 0 nongenic -965 downstream F54H5.4a 791 CB6648_redo II 6630609 1 T C 255 1.00 63 62 15 57 72 @Ccc..CCCCC..C.c.CC.cCcCCc.cCCCCCCCCCCCC.Ccc.cCcCCccCCCc..c.ccCccCCccC.C. point 0 nongenic -492 upstream T19D12.4a 791 CB6648_redo II 6630609 1 T C 255 1.00 63 62 15 57 72 @Ccc..CCCCC..C.c.CC.cCcCCc.cCCCCCCCCCCCC.Ccc.cCcCCccCCCc..c.ccCccCCccC.C. point 0 nongenic -536 upstream T19D12.4b 792 CB6648_redo II 6640325 1 C G 27 1.00 63 62 1 3 4 @gGG. point 0 nongenic 2740 into T19D12.6 796 CB6648_redo II 6669138 1 G C 201 1.00 63 62 1 13 14 @ccccccccccccc, point 0 silent TCG->TCC[Ser->Ser] T19D12.1 797 CB6648_redo II 6713192 1 G T 91 1.00 63 40 1 6 7 @,tTTTTt point 0 nongenic -1043 upstream T14B4.6 797 CB6648_redo II 6713192 1 G T 91 1.00 63 40 1 6 7 @,tTTTTt point 0 nongenic -313 upstream T14B4.7b.1 798 CB6648_redo II 6713193 1 T G 133 1.00 63 62 0 7 7 @gGGGGgg point 0 nongenic -1042 upstream T14B4.6 798 CB6648_redo II 6713193 1 T G 133 1.00 63 62 0 7 7 @gGGGGgg point 0 nongenic -314 upstream T14B4.7b.1 802 CB6648_redo II 6718362 1 C G 99 1.00 63 0 0 6 6 @ggGGGg point 0 nongenic -115 upstream T14B4.4a.1 802 CB6648_redo II 6718362 1 C G 99 1.00 63 0 0 6 6 @ggGGGg point 0 nongenic -141 upstream T14B4.4a.2,T14B4.4b.2 802 CB6648_redo II 6718362 1 C G 99 1.00 63 0 0 6 6 @ggGGGg point 0 nongenic 656 downstream T14B4.5 804 CB6648_redo II 6721755 1 A C 135 6.31 63 60 0 6 6 @CcCCcc point 0 ncRNA none T14B4.t1 805 CB6648_redo II 6721756 1 G C 152 5.69 63 62 0 6 6 @cCCccC point 0 ncRNA none T14B4.t1 4123 CB6648_redo II 6724147 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @,,,,cc indel 0 nongenic -2583 upstream T14B4.8 806 CB6648_redo II 6724148 1 A C 60 1.00 63 62 2 3 5 @CCC.. point 0 nongenic -2584 upstream T14B4.8 807 CB6648_redo II 6725103 1 C G 19 1.00 63 62 1 4 5 @GGgG, point 0 nongenic -3539 upstream T14B4.8 808 CB6648_redo II 6727391 1 T G 68 1.00 63 62 2 4 6 @gGgg., point 0 SNP none haw25948 160802 CB6648_redo II 6730769 71 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2884 to 2955 bp into T14B4.9 810 CB6648_redo II 6734010 1 C T 157 1.00 63 62 0 6 6 @tTTTTt point 0 nongenic -286 upstream T14B4.9 810 CB6648_redo II 6734010 1 C T 157 1.00 63 62 0 6 6 @tTTTTt point 0 nongenic -836 upstream T14B4.3 813 CB6648_redo II 6736304 1 C G 255 1.00 63 62 0 42 42 @GGggggGGGGGggGgGggGgGgGgGgggGggGgGgggggGGg point 0 missense TCC->TGC[Ser->Cys] T14B4.2 813 CB6648_redo II 6736304 1 C G 255 1.00 63 62 0 42 42 @GGggggGGGGGggGgGggGgGgGgGgggGggGgGgggggGGg point 0 SNP none haw25953 814 CB6648_redo II 6736306 1 T C 255 1.00 63 62 0 42 42 @ccccCCCCCccCcCcgCcCcCcCcccCccCcCcccccCCccc point 0 missense TTC->CTC[Phe->Leu] T14B4.2 814 CB6648_redo II 6736306 1 T C 255 1.00 63 62 0 42 42 @ccccCCCCCccCcCcgCcCcCcCcccCccCcCcccccCCccc point 0 SNP none haw25954 815 CB6648_redo II 6736474 1 A C 131 1.00 63 62 0 6 6 @CcCCCc point 0 missense AAC->CAC[Asn->His] T14B4.2 816 CB6648_redo II 6736476 1 C A 87 1.00 63 62 0 5 5 @aAAAa point 0 missense AAC->AAA[Asn->Lys] T14B4.2 817 CB6648_redo II 6736477 1 A C 94 1.00 63 62 0 4 4 @CCCc point 0 missense AAG->CAG[Lys->Gln] T14B4.2 823 CB6648_redo II 6745225 1 A C 47 1.00 63 50 2 3 5 @cCc.. point 0 nongenic -554 upstream F41G3.17 823 CB6648_redo II 6745225 1 A C 47 1.00 63 50 2 3 5 @cCc.. point 0 nongenic 194 downstream F41G3.16 824 CB6648_redo II 6745251 1 A C 255 1.00 63 62 0 17 17 @ccCCCCCCcCCCCCCcc point 0 nongenic -580 upstream F41G3.17 824 CB6648_redo II 6745251 1 A C 255 1.00 63 62 0 17 17 @ccCCCCCCcCCCCCCcc point 0 nongenic 168 downstream F41G3.16 827 CB6648_redo II 6755908 1 A T 255 1.00 63 62 0 40 40 @TtTttTTtttTttTTtTTtTtTTtttttTTtttttTTTTt point 0 SNP none haw25965 828 CB6648_redo II 6759799 1 A T 112 1.00 63 62 6 12 18 @tTttttTTTTt,T..... point 0 nongenic 569 into F41G3.2 828 CB6648_redo II 6759799 1 A T 112 1.00 63 62 6 12 18 @tTttttTTTTt,T..... point 0 nongenic 823 downstream F41G3.12 828 CB6648_redo II 6759799 1 A T 112 1.00 63 62 6 12 18 @tTttttTTTTt,T..... point 0 nongenic 937 downstream F41G3.3 829 CB6648_redo II 6759908 1 C T 189 1.00 63 62 0 7 7 @TTttttT point 0 missense CCC->TCC[Pro->Ser] F41G3.2 830 CB6648_redo II 6759912 1 A G 110 1.00 63 0 0 4 4 @gggG point 0 missense CAA->CGA[Gln->Arg] F41G3.2 831 CB6648_redo II 6759919 1 A G 114 1.00 63 0 0 4 4 @GGgg point 0 silent GAA->GAG[Glu->Glu] F41G3.2 832 CB6648_redo II 6759922 1 C T 148 1.00 63 62 0 6 6 @TTttTt point 0 silent ACC->ACT[Thr->Thr] F41G3.2 833 CB6648_redo II 6762603 1 C T 255 1.00 63 62 0 29 29 @TtTTTTtttttTttttTTTtttTttTttt point 0 SNP none haw25977 834 CB6648_redo II 6764076 1 C A 111 1.00 63 10 0 5 5 @AaAAA point 0 nongenic -903 upstream F41G3.1.1 834 CB6648_redo II 6764076 1 C A 111 1.00 63 10 0 5 5 @AaAAA point 0 nongenic -941 upstream F41G3.1.2 834 CB6648_redo II 6764076 1 C A 111 1.00 63 10 0 5 5 @AaAAA point 0 nongenic 3454 into F41G3.12 835 CB6648_redo II 6764077 1 A C 116 1.00 63 10 0 5 5 @CcCCC point 0 nongenic -902 upstream F41G3.1.1 835 CB6648_redo II 6764077 1 A C 116 1.00 63 10 0 5 5 @CcCCC point 0 nongenic -940 upstream F41G3.1.2 835 CB6648_redo II 6764077 1 A C 116 1.00 63 10 0 5 5 @CcCCC point 0 nongenic 3455 into F41G3.12 838 CB6648_redo II 6766065 1 C T 255 1.00 63 62 0 40 40 @tTttTtTTtTttTtTTtTttTTTtTTTtTTTTtTtTtTtT point 0 SNP none haw25988 839 CB6648_redo II 6766211 1 C T 255 1.00 63 62 0 27 27 @TTTTTTtTtTTttTtTTTTTTtTtTTT point 0 SNP none haw25989 840 CB6648_redo II 6808829 1 A G 255 1.00 63 62 0 24 24 @GggggGgggGGggggGGggGgggG point 0 SNP none haw26048 841 CB6648_redo II 6818451 1 A G 40 1.00 63 62 5 7 12 @.,,,,GgGGgGg point 0 nongenic -9605 upstream F31E8.1 842 CB6648_redo II 6878056 1 C T 255 1.00 63 62 0 11 11 @TTTTtTTtTTt point 0 SNP none haw26160 843 CB6648_redo II 6896314 1 T A 255 1.00 63 62 0 50 50 @aaaaaAaaAaaAAAAAAAaAaaaaaAAAaaaaAAAAaAAAAaaAAAAAaa point 0 SNP none haw26186 844 CB6648_redo II 6908985 1 C T 255 1.00 63 62 0 52 52 @TTTttTtttTTtttTTTtTTTtttttttttTTttttttTtTTtTtttTtTTT point 0 SNP none haw26205 845 CB6648_redo II 6942564 1 T G 35 1.00 63 0 0 4 4 @GGGg point 0 nongenic -1677 upstream F22D3.2c 845 CB6648_redo II 6942564 1 T G 35 1.00 63 0 0 4 4 @GGGg point 0 nongenic -3757 upstream F22D3.5 845 CB6648_redo II 6942564 1 T G 35 1.00 63 0 0 4 4 @GGGg point 0 nongenic 4321 into F22D3.2b 845 CB6648_redo II 6942564 1 T G 35 1.00 63 0 0 4 4 @GGGg point 0 nongenic 5260 into F22D3.2a 846 CB6648_redo II 6942566 1 C T 158 1.00 63 0 0 6 6 @TTTtTt point 0 nongenic -1675 upstream F22D3.2c 846 CB6648_redo II 6942566 1 C T 158 1.00 63 0 0 6 6 @TTTtTt point 0 nongenic -3759 upstream F22D3.5 846 CB6648_redo II 6942566 1 C T 158 1.00 63 0 0 6 6 @TTTtTt point 0 nongenic 4319 into F22D3.2b 846 CB6648_redo II 6942566 1 C T 158 1.00 63 0 0 6 6 @TTTtTt point 0 nongenic 5258 into F22D3.2a 847 CB6648_redo II 6999734 1 C A 255 1.00 63 62 0 21 21 @aAaAAaaAaaAAAAAaaaaAa point 0 SNP none haw26262 849 CB6648_redo II 7003347 1 T A 255 1.00 63 62 0 35 35 @AAAAAAaAAAAAAAAAAAAaAAaaAAaAaAAAaAa point 0 missense GTA->GAA[Val->Glu] C52E12.2a,C52E12.2b 853 CB6648_redo II 7028439 1 T A 95 1.00 63 0 0 5 5 @aaAaa point 0 nongenic -9793 upstream ZK1127.7 853 CB6648_redo II 7028439 1 T A 95 1.00 63 0 0 5 5 @aaAaa point 0 nongenic 1385 into C52E12.1.2 853 CB6648_redo II 7028439 1 T A 95 1.00 63 0 0 5 5 @aaAaa point 0 nongenic 1653 into C52E12.1.1 855 CB6648_redo II 7123163 1 T C 171 1.69 63 62 0 6 6 @cccCcc point 0 nongenic -1432 upstream F10E7.3 855 CB6648_redo II 7123163 1 T C 171 1.69 63 62 0 6 6 @cccCcc point 0 nongenic -1441 upstream F10E7.11 855 CB6648_redo II 7123163 1 T C 171 1.69 63 62 0 6 6 @cccCcc point 0 nongenic 983 into F10E7.2 857 CB6648_redo II 7141342 1 T A 5 1.31 63 18 1 3 4 @.aaa point 0 nongenic -3216 upstream T07F8.2 860 CB6648_redo II 7398345 1 G A 100 1.00 63 62 2 4 6 @,,AaAa point 0 nongenic -605 upstream C07D10.1 4139 CB6648_redo II 7403159 0 X X -1000 -999.99 -1000 -1000 4 0 4 @...,Cc indel 1 nongenic -513 upstream C07D10.4 4139 CB6648_redo II 7403159 0 X X -1000 -999.99 -1000 -1000 4 0 4 @...,Cc indel 1 nongenic -5272 upstream K02A2.2 861 CB6648_redo II 7403160 1 C A 52 1.00 63 62 0 7 7 @aaaAAaa point 0 nongenic -514 upstream C07D10.4 861 CB6648_redo II 7403160 1 C A 52 1.00 63 62 0 7 7 @aaaAAaa point 0 nongenic -5270 upstream K02A2.2 862 CB6648_redo II 7422323 1 T C 10 1.00 63 22 3 3 6 @Ccc.,, point 0 nongenic -10353 upstream K02A2.5 864 CB6648_redo II 7444114 1 A C 48 1.62 63 20 3 4 7 @,,,CCcc point 0 nongenic -2495 upstream Y9D1A.1 867 CB6648_redo II 7486763 1 G C 86 1.19 63 62 1 6 7 @.cccCcc point 0 nongenic -3718 upstream D1022.8 868 CB6648_redo II 7584472 1 C A 8 4.94 63 62 7 11 18 @,,,....aaaAAAAAAaa point 0 nongenic -983 upstream F35D2.4 872 CB6648_redo II 7625205 1 G T 11 1.00 63 24 4 5 9 @..,,TTTtt point 0 nongenic -4759 upstream R07G3.8 873 CB6648_redo II 7625206 1 T G 25 1.00 63 10 3 7 10 @..,CGGGggg point 0 nongenic -4760 upstream R07G3.8 874 CB6648_redo II 7634326 1 T G 153 1.00 63 26 1 6 7 @.gGgGgg point 0 nongenic -163 upstream R153.1a 874 CB6648_redo II 7634326 1 T G 153 1.00 63 26 1 6 7 @.gGgGgg point 0 nongenic 6332 into R153.1b,R153.1c,R153.1d,R153.1e 874 CB6648_redo II 7634326 1 T G 153 1.00 63 26 1 6 7 @.gGgGgg point 0 nongenic 7144 into R153.1g 875 CB6648_redo II 7642038 1 C G 57 1.00 63 36 0 4 4 @ggGg point 0 five_prime_UTR none R153.1d,R153.1f 879 CB6648_redo II 7642076 1 G T 35 1.00 63 0 0 4 4 @tTTT point 0 five_prime_UTR none R153.1d,R153.1f 882 CB6648_redo II 7696463 1 T A 53 1.00 63 52 5 8 13 @.,.,,AaAAAaAa point 0 nongenic -2579 upstream B0495.4 882 CB6648_redo II 7696463 1 T A 53 1.00 63 52 5 8 13 @.,.,,AaAAAaAa point 0 nongenic 529 into B0495.5.2 882 CB6648_redo II 7696463 1 T A 53 1.00 63 52 5 8 13 @.,.,,AaAAAaAa point 0 nongenic 594 into B0495.5.1 883 CB6648_redo II 7697395 1 A C 64 0.00 63 56 0 4 4 @cccC point 0 missense TCC->GCC[Ser->Ala] B0495.5.1,B0495.5.2 884 CB6648_redo II 7697396 1 T A 57 0.00 63 60 0 5 5 @aaaAA point 0 silent GGA->GGT[Gly->Gly] B0495.5.1,B0495.5.2 885 CB6648_redo II 7697397 1 C T 68 1.00 63 56 0 5 5 @ttTTT point 0 missense GGA->GAA[Gly->Glu] B0495.5.1,B0495.5.2 886 CB6648_redo II 7698554 1 A T 35 1.00 63 22 0 4 4 @tttt point 0 SNP none haw26816 889 CB6648_redo II 7698791 1 T G 52 1.00 63 62 3 6 9 @.,.gggGGg point 0 nongenic -359 upstream B0495.5.1 889 CB6648_redo II 7698791 1 T G 52 1.00 63 62 3 6 9 @.,.gggGGg point 0 nongenic -371 upstream B0495.5.2 889 CB6648_redo II 7698791 1 T G 52 1.00 63 62 3 6 9 @.,.gggGGg point 0 nongenic -386 upstream B0495.2 889 CB6648_redo II 7698791 1 T G 52 1.00 63 62 3 6 9 @.,.gggGGg point 0 nongenic 167 into B0495.6 160803 CB6648_redo II 7743768 96 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1446 to 1542 bp into B0228.4e 160803 CB6648_redo II 7743768 96 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 18941 to 19037 bp into B0228.4a,B0228.4c 4157 CB6648_redo II 7745769 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @,,,TTT indel 0 nongenic -3447 downstream B0228.4e 4157 CB6648_redo II 7745769 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @,,,TTT indel 0 nongenic -6589 downstream B0228.4a 4157 CB6648_redo II 7745769 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @,,,TTT indel 0 nongenic -6876 downstream B0228.4c 894 CB6648_redo II 7754509 1 C A 122 1.00 63 60 3 8 11 @AaAaaaaa.,. point 0 missense TTG->TTT[Leu->Phe] B0228.6 4159 CB6648_redo II 7803627 0 X X -1000 -999.99 -1000 -1000 2 1 3 @.,cCc indel 0 nongenic -7544 upstream T05A6.1 4159 CB6648_redo II 7803627 0 X X -1000 -999.99 -1000 -1000 2 1 3 @.,cCc indel 0 nongenic -9377 upstream C06A8.9 898 CB6648_redo II 7809946 1 T C 102 1.00 63 50 1 4 5 @CccC. point 0 SNP none haw26900 899 CB6648_redo II 7866905 1 C A 4 1.00 63 62 3 6 9 @,..AaAAaa point 0 missense AGG->ATG[Arg->Met] T09A5.12.1,T09A5.12.2 900 CB6648_redo II 7871212 1 G A 57 1.00 63 62 1 3 4 @.AaA point 0 missense CCT->CTT[Pro->Leu] T01H3.3.1,T01H3.3.2 901 CB6648_redo II 7883746 1 C G 233 1.44 63 62 0 15 15 @GGgGGGGgGgGGGGg point 0 nongenic -9413 upstream ZK675.1.1,ZK675.1.2 902 CB6648_redo II 7913323 1 C A 255 1.00 63 62 0 39 39 @aAaAAaAaaAAAAaaAAAAAAaaaaaAAaAaaaaAaaaA point 0 SNP none haw26997 903 CB6648_redo II 7960769 1 C G 255 1.00 63 62 0 49 49 @GgGGGggGggGGGGGgGggggggGgGGGggGgggGggGggGGgGGgggg point 0 SNP none haw27047 904 CB6648_redo II 8033056 1 C G 110 1.00 63 62 3 10 13 @ggGGgGGgGg,.. point 0 nongenic -416 upstream C08B11.4 905 CB6648_redo II 8033057 1 A C 92 1.00 63 62 3 8 11 @CCcCCcCc,.. point 0 nongenic -417 upstream C08B11.4 909 CB6648_redo II 8049770 1 T A 45 1.00 63 18 0 5 5 @aaAaa point 0 nongenic -3296 upstream T05H10.4a,T05H10.4b.2 909 CB6648_redo II 8049770 1 T A 45 1.00 63 18 0 5 5 @aaAaa point 0 nongenic 724 into T05H10.3 909 CB6648_redo II 8049770 1 T A 45 1.00 63 18 0 5 5 @aaAaa point 0 nongenic 734 downstream T05H10.2 910 CB6648_redo II 8227927 1 G C 255 1.00 63 62 0 36 36 @CcCCcCCCCCccCCCCCCCcCcCCCcCcccccccCc point 0 missense CGC->CCC[Arg->Pro] M110.5a.1,M110.5a.2,M110.5b,M110.5c,M110.5d 911 CB6648_redo II 8227928 1 C G 255 1.00 63 62 0 37 37 @GgGGgGGGGGggGGGGGGGgGgGGGgGgggggggGgg point 0 silent CGC->CGG[Arg->Arg] M110.5a.1,M110.5a.2,M110.5b,M110.5c,M110.5d 914 CB6648_redo II 8262986 1 T C 195 5.38 63 62 0 9 9 @CCCCCccCC point 0 nongenic -1606 upstream K01C8.1.1 914 CB6648_redo II 8262986 1 T C 195 5.38 63 62 0 9 9 @CCCCCccCC point 0 nongenic -3923 upstream F35C11.6 919 CB6648_redo II 8584093 1 C T 255 1.00 63 62 0 34 34 @tttTtTtTtTttTtttttTTttTTtTTTttTTtt point 0 missense GGA->GAA[Gly->Glu] F54C9.11 919 CB6648_redo II 8584093 1 C T 255 1.00 63 62 0 34 34 @tttTtTtTtTttTtttttTTttTTtTTTttTTtt point 0 SNP none haw27317 920 CB6648_redo II 8622310 1 C A 119 1.00 63 62 3 9 12 @AaAaAAaaa.,. point 0 nongenic -404 upstream T22C8.3 920 CB6648_redo II 8622310 1 C A 119 1.00 63 62 3 9 12 @AaAaAAaaa.,. point 0 nongenic 176 downstream T22C8.4 924 CB6648_redo II 8715377 1 C T 255 1.00 63 62 0 43 43 @TTTttTtTTTttTttttTttttTttttTttTTTTtTTtttTTt point 0 SNP none haw27384 4169 CB6648_redo II 8798261 0 X X -1000 -999.99 -1000 -1000 2 0 2 @.,Ggg indel 0 nongenic -2756 upstream F07H5.8 4169 CB6648_redo II 8798261 0 X X -1000 -999.99 -1000 -1000 2 0 2 @.,Ggg indel 0 nongenic -4179 upstream F07H5.7 930 CB6648_redo II 8802488 1 T G 255 1.00 63 62 0 57 57 @GgGgGGGGgggggGggggGGggGGGGggGgggggggGGGgGGgGGGGggggGggggg point 0 silent TCT->TCG[Ser->Ser] F07H5.8 930 CB6648_redo II 8802488 1 T G 255 1.00 63 62 0 57 57 @GgGgGGGGgggggGggggGGggGGGGggGgggggggGGGgGGgGGGGggggGggggg point 0 SNP none haw27428 931 CB6648_redo II 8824743 1 A G 29 2.81 63 62 2 3 5 @,,GGG point 0 nongenic -1248 upstream F46C5.3 931 CB6648_redo II 8824743 1 A G 29 2.81 63 62 2 3 5 @,,GGG point 0 nongenic -3617 upstream F46C5.1 932 CB6648_redo II 8867479 1 G C 43 1.62 63 62 1 6 7 @,cccCcc point 0 nongenic -2373 upstream T07D4.1 933 CB6648_redo II 8894561 1 T C 7 1.00 63 62 1 4 5 @,Cccc point 0 nongenic -2200 upstream B0457.1a,B0457.1b 934 CB6648_redo II 8894955 1 C T 255 1.00 63 62 0 32 32 @TTTTtTtTTtttttTtttTTtttTTttTTTTT point 0 SNP none haw27502 4174 CB6648_redo II 8896592 1 X X -1000 -999.99 -1000 -1000 12 -5 7 @.,,,..,,.... indel -1 SNP none uCE2-1805 935 CB6648_redo II 8907371 1 C T 255 1.00 63 62 0 30 30 @ttTtttttTtTtTTtTtttttttttttTtT point 0 SNP none haw27506 936 CB6648_redo II 8916732 1 G A 138 1.00 63 62 0 4 4 @AaAA point 0 nongenic -4781 upstream B0457.4 936 CB6648_redo II 8916732 1 G A 138 1.00 63 62 0 4 4 @AaAA point 0 nongenic -5639 upstream B0457.6 939 CB6648_redo II 8916760 1 C T 164 1.00 63 62 0 5 5 @TTtTT point 0 nongenic -4809 upstream B0457.4 939 CB6648_redo II 8916760 1 C T 164 1.00 63 62 0 5 5 @TTtTT point 0 nongenic -5611 upstream B0457.6 941 CB6648_redo II 9090950 1 G T 6 1.00 63 20 2 2 4 @,.Tt point 0 nongenic 174 downstream C07H4.1 942 CB6648_redo II 9092377 1 C T 255 1.00 63 62 0 39 39 @TTTTtTTtttTttTttTTTTTtttTTTtTtTTtTTtTtt point 0 SNP none haw27664 943 CB6648_redo II 9181323 1 T G 35 1.00 63 0 0 4 4 @Gggg point 0 nongenic 2889 into ZK1067.6 944 CB6648_redo II 9234921 1 T A 44 1.00 63 62 1 3 4 @.aaA point 0 missense AAT->AAA[Asn->Lys] T26C5.2 945 CB6648_redo II 9234923 1 C T 198 1.00 63 44 0 6 6 @ttTTTT point 0 missense TCC->TTC[Ser->Phe] T26C5.2 946 CB6648_redo II 9322175 1 T C 92 1.00 63 62 4 9 13 @CcCCCCCCc..,. point 0 nongenic -1708 upstream D2013.10 946 CB6648_redo II 9322175 1 T C 92 1.00 63 62 4 9 13 @CcCCCCCCc..,. point 0 nongenic 184 into D2013.1 946 CB6648_redo II 9322175 1 T C 92 1.00 63 62 4 9 13 @CcCCCCCCc..,. point 0 nongenic 372 downstream D2013.2 947 CB6648_redo II 9322176 1 C A 71 1.00 63 62 4 7 11 @AAAAAAa..,. point 0 nongenic -1707 upstream D2013.10 947 CB6648_redo II 9322176 1 C A 71 1.00 63 62 4 7 11 @AAAAAAa..,. point 0 nongenic 185 into D2013.1 947 CB6648_redo II 9322176 1 C A 71 1.00 63 62 4 7 11 @AAAAAAa..,. point 0 nongenic 373 downstream D2013.2 948 CB6648_redo II 9331348 1 C T 255 1.00 63 62 0 29 29 @ttttttttttTtTtttttttttttttttt point 0 SNP none haw27818 4180 CB6648_redo II 9419090 0 X X -1000 -999.99 -1000 -1000 6 7 13 @,,,,,.ccCcc indel 0 nongenic -1313 upstream M176.4 4180 CB6648_redo II 9419090 0 X X -1000 -999.99 -1000 -1000 6 7 13 @,,,,,.ccCcc indel 0 nongenic 853 downstream M176.3.1 4180 CB6648_redo II 9419090 0 X X -1000 -999.99 -1000 -1000 6 7 13 @,,,,,.ccCcc indel 0 nongenic 885 downstream M176.3.2 952 CB6648_redo II 9426638 1 T A 12 1.00 63 62 4 5 9 @.,,,AaaAa point 0 nongenic -541 upstream M176.10 952 CB6648_redo II 9426638 1 T A 12 1.00 63 62 4 5 9 @.,,,AaaAa point 0 nongenic 413 into M176.5 953 CB6648_redo II 9427750 1 T C 32 1.00 63 62 4 7 11 @CCCCCCC.,,. point 0 nongenic -91 upstream M176.5 954 CB6648_redo II 9428872 1 G A 255 1.00 63 62 0 30 30 @AAaaAAaaaaaAaaaaaaaaaaAaaAAAAa point 0 SNP none haw27856 955 CB6648_redo II 9436563 1 C T 255 1.00 63 62 0 43 43 @ttttTtTTTtTttttTTtTTTTTttTTTTTTTTttTttttTTt point 0 SNP none haw27860 956 CB6648_redo II 9437400 1 T G 23 1.00 63 32 1 3 4 @.Ggg point 0 nongenic -1368 upstream M176.7 957 CB6648_redo II 9437401 1 G C 33 1.00 63 22 1 5 6 @.CccCC point 0 nongenic -1369 upstream M176.7 958 CB6648_redo II 9490848 1 G A 158 1.00 63 10 0 8 8 @ataAaaaA point 0 nongenic -2666 upstream T19H5.4a 959 CB6648_redo II 9490850 1 A T 11 1.00 63 62 3 5 8 @TtttT,.. point 0 nongenic -2668 upstream T19H5.4a 963 CB6648_redo II 10019098 1 A C 255 4.19 63 62 0 51 51 @CccccCcccccCCCCCcCccCccCCcccCCCCcCcCcCcCccCcCCCCCCc point 0 nongenic -3114 upstream F52H3.7a 971 CB6648_redo II 10339269 1 T C 96 7.00 63 62 1 4 5 @.CCCC point 0 nongenic 344 downstream C07E3.2.1 971 CB6648_redo II 10339269 1 T C 96 7.00 63 62 1 4 5 @.CCCC point 0 nongenic 498 downstream C07E3.2.2 972 CB6648_redo II 10340121 1 T G 255 1.00 63 62 0 39 39 @GgGGgGggGGgggggGGGGgGGgggggggggggGggGgg point 0 missense CAT->CCT[His->Pro] C07E3.2.1,C07E3.2.2 4192 CB6648_redo II 10430280 1 X X -1000 -999.99 -1000 -1000 3 0 3 @,,. indel -1 SNP none uCE2-1895 975 CB6648_redo II 10432291 1 A C 35 1.00 63 62 4 7 11 @..,.CCCcCcc point 0 nongenic -10342 upstream E04D5.2 975 CB6648_redo II 10432291 1 A C 35 1.00 63 62 4 7 11 @..,.CCCcCcc point 0 nongenic -3774 upstream E04D5.3 976 CB6648_redo II 10436909 1 A C 255 1.00 63 62 0 34 34 @cCCCccCCcCCcCcCccCCcccCccccCccCCcC point 0 SNP none haw28333,snp_E04D5[5] 977 CB6648_redo II 10437067 1 G A 255 1.00 63 62 0 21 21 @AaaaaaaaaaaaaaAAAaAAa point 0 SNP none haw28334 978 CB6648_redo II 10473915 1 A G 255 1.00 63 62 0 34 34 @gGgGggGGgGGgGGGgGgGGggGgggGGgGgGgg point 0 SNP none haw28363 979 CB6648_redo II 10724355 1 C T 255 1.00 63 62 0 22 22 @TTtTtTtTttTTTtTTTTTtTT point 0 SNP none haw28599 980 CB6648_redo II 10779219 1 G T 255 1.00 63 62 0 36 36 @ttTTTttTTTTTTCtttTTTTTTTttTtTttTTTTT point 0 nongenic -4234 upstream C52A11.4d 980 CB6648_redo II 10779219 1 G T 255 1.00 63 62 0 36 36 @ttTTTttTTTTTTCtttTTTTTTTttTtTttTTTTT point 0 nongenic -6153 upstream R06F6.1.1 980 CB6648_redo II 10779219 1 G T 255 1.00 63 62 0 36 36 @ttTTTttTTTTTTCtttTTTTTTTttTtTttTTTTT point 0 nongenic 355 into T19E10.1a 980 CB6648_redo II 10779219 1 G T 255 1.00 63 62 0 36 36 @ttTTTttTTTTTTCtttTTTTTTTttTtTttTTTTT point 0 nongenic 898 into T19E10.1b 981 CB6648_redo II 10779220 1 G A 255 1.00 63 62 1 34 35 @aAAAaaA,AAAAAaaaAAAAAAAaaAaAaaAAAAA point 0 nongenic -4235 upstream C52A11.4d 981 CB6648_redo II 10779220 1 G A 255 1.00 63 62 1 34 35 @aAAAaaA,AAAAAaaaAAAAAAAaaAaAaaAAAAA point 0 nongenic -6152 upstream R06F6.1.1 981 CB6648_redo II 10779220 1 G A 255 1.00 63 62 1 34 35 @aAAAaaA,AAAAAaaaAAAAAAAaaAaAaaAAAAA point 0 nongenic 356 into T19E10.1a 981 CB6648_redo II 10779220 1 G A 255 1.00 63 62 1 34 35 @aAAAaaA,AAAAAaaaAAAAAAAaaAaAaaAAAAA point 0 nongenic 899 into T19E10.1b 982 CB6648_redo II 10827063 1 C T 255 1.00 63 62 0 83 83 @TTTTTtttTtTTtTTTTtTTtTTTTTTTttttTTTTtttTTTTTtTtTtTtTTTtttTTTTTTttTTTtTTTtTtTtttTTTT point 0 SNP none haw28664,snp_VM106R[1] 983 CB6648_redo II 10827279 1 A T 50 1.00 63 62 8 12 20 @ttttTtTtTtTt......., point 0 nongenic -3276 upstream R06F6.12 983 CB6648_redo II 10827279 1 A T 50 1.00 63 62 8 12 20 @ttttTtTtTtTt......., point 0 nongenic 3062 into M106.1 983 CB6648_redo II 10827279 1 A T 50 1.00 63 62 8 12 20 @ttttTtTtTtTt......., point 0 nongenic 354 downstream VM106R.1 984 CB6648_redo II 10828430 1 C T 255 1.00 63 62 0 40 40 @tTtttttTtTTTttTTttttTTTTTTttttTTTTttTTtt point 0 SNP none haw28666 985 CB6648_redo II 10828577 1 G A 255 1.00 63 62 0 33 33 @aaaaaaAAaaAaAaaaaaAaaaAAAAAAaAaaA point 0 SNP none haw28667 986 CB6648_redo II 10829219 1 G A 255 1.00 63 62 0 41 41 @AaaAAaAaaAaaAaaAaaAAAaAAAAAaAAaaaAaAaAaaa point 0 SNP none haw28668 987 CB6648_redo II 11031295 1 T A 7 1.00 63 4 1 5 6 @.Aaaaa point 0 nongenic -4814 upstream F33A8.10 987 CB6648_redo II 11031295 1 T A 7 1.00 63 4 1 5 6 @.Aaaaa point 0 nongenic -967 upstream F33A8.2.1,F33A8.2.2 988 CB6648_redo II 11092046 1 T C 255 1.00 63 62 0 43 43 @ccCccCCccCCcccCcCCCCcCcccCcCccCCcCCCCcCCccC point 0 nongenic -2665 upstream F45E10.1a,F45E10.1b,F45E10.1c,F45E10.1d 988 CB6648_redo II 11092046 1 T C 255 1.00 63 62 0 43 43 @ccCccCCccCCcccCcCCCCcCcccCcCccCCcCCCCcCCccC point 0 nongenic -626 upstream C09H10.1 992 CB6648_redo II 11181038 1 T G 69 1.00 63 62 1 3 4 @,gGg point 0 SNP none snp_F37H8[3] 4199 CB6648_redo II 11196929 0 X X -1000 -999.99 -1000 -1000 5 -2 3 @..,,.Gg indel 0 nongenic -6811 upstream T06D8.1a,T06D8.1b 4200 CB6648_redo II 11200489 4 X X -1000 -999.99 -1000 -1000 9 -8 1 @.,,..,,.. indel -4 SNP none snp_F37H8[6] 4202 CB6648_redo II 11207621 0 X X -1000 -999.99 -1000 -1000 4 1 5 @,.,,aAA indel 0 inframe none T06D8.1a,T06D8.1b 998 CB6648_redo II 11212017 1 G T 125 2.44 63 62 15 15 30 @...TT....TTTTT,...,.T.T.TTTtTT point 0 nongenic -10211 upstream T06D8.3 998 CB6648_redo II 11212017 1 G T 125 2.44 63 62 15 15 30 @...TT....TTTTT,...,.T.T.TTTtTT point 0 nongenic 8278 into T06D8.1a,T06D8.1b 998 CB6648_redo II 11212017 1 G T 125 2.44 63 62 15 15 30 @...TT....TTTTT,...,.T.T.TTTtTT point 0 splice_donor none T06D8.1a,T06D8.1b 1003 CB6648_redo II 11318254 1 A C 52 1.00 63 62 2 4 6 @CCCC., point 0 nongenic -4071 upstream T24F1.4 1003 CB6648_redo II 11318254 1 A C 52 1.00 63 62 2 4 6 @CCCC., point 0 nongenic 903 downstream T24F1.5 1010 CB6648_redo II 11611863 1 G T 114 1.00 63 62 2 8 10 @.,TTTtTttt point 0 nongenic -136 upstream F07A11.5 1010 CB6648_redo II 11611863 1 G T 114 1.00 63 62 2 8 10 @.,TTTtTttt point 0 nongenic 416 downstream F07A11.4 1011 CB6648_redo II 11611864 1 A G 116 1.00 63 62 2 8 10 @.,GGGgGggg point 0 nongenic -135 upstream F07A11.5 1011 CB6648_redo II 11611864 1 A G 116 1.00 63 62 2 8 10 @.,GGGgGggg point 0 nongenic 417 downstream F07A11.4 4206 CB6648_redo II 11611946 0 X X -1000 -999.99 -1000 -1000 5 -1 4 @,,,,.TTT indel 0 nongenic -54 upstream F07A11.5 4206 CB6648_redo II 11611946 0 X X -1000 -999.99 -1000 -1000 5 -1 4 @,,,,.TTT indel 0 nongenic 499 downstream F07A11.4 4207 CB6648_redo II 11717737 1 X X -1000 -999.99 -1000 -1000 9 -5 4 @,.,,,,,.. indel -1 SNP none uCE2-2035 1012 CB6648_redo II 11717738 1 T G 14 1.00 63 62 4 5 9 @GgGGG,,.. point 0 SNP none uCE2-2035 1013 CB6648_redo II 11794523 1 A C 255 1.00 63 62 0 35 35 @CcccCCcCcCCCCCcCCcccccccCccCcCCccCC point 0 nongenic -4429 upstream F43G6.11a,F43G6.11b 1013 CB6648_redo II 11794523 1 A C 255 1.00 63 62 0 35 35 @CcccCCcCcCCCCCcCCcccccccCccCcCCccCC point 0 nongenic 2641 into F43G6.4 1015 CB6648_redo II 12036144 1 G C 5 1.00 63 62 7 7 14 @CC,,CAC,,,,C,c point 0 nongenic -8482 upstream Y17G7B.8 1015 CB6648_redo II 12036144 1 G C 5 1.00 63 62 7 7 14 @CC,,CAC,,,,C,c point 0 nongenic 507 into Y17G7B.9 1015 CB6648_redo II 12036144 1 G C 5 1.00 63 62 7 7 14 @CC,,CAC,,,,C,c point 0 nongenic 594 downstream Y17G7B.7.1 1016 CB6648_redo II 12115353 1 C T 255 1.00 63 62 0 45 45 @TttttttTtttttTttTttTTtTTtttttttttttTtttTTTTTt point 0 SNP none haw30080 1018 CB6648_redo II 12170815 1 G A 255 1.00 63 62 0 43 43 @AAAAaAAAAAAaAAaAAAAaAAAAaAAAAaAAAaAAAAaaAAa point 0 SNP none haw30197 1020 CB6648_redo II 12171258 1 C T 7 1.75 63 2 36 36 72 @T....tt..TT.tT,.T,.,t..tTT,,.t,T,,TT.,T,,.tttT,.TtTT,T,t.,,..tT.TtTTttt. point 0 SNP none haw30199 1022 CB6648_redo II 12174493 1 G A 255 1.00 63 62 0 19 19 @AAaAaAAAAAaaAAaAAaa point 0 SNP none haw30201 1023 CB6648_redo II 12178809 1 C T 255 1.00 63 62 0 31 31 @tTTttTTTttttTTtTTTTTttTTTtttTTT point 0 SNP none haw30206 160814 CB6648_redo II 12181904 142 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2742 to 2884 bp into Y57A10A.13 1024 CB6648_redo II 12193173 1 G A 255 1.00 63 62 0 24 24 @AaaaaAaAAAAaaaaaAaAAAAAA point 0 nongenic 3382 into Y57A10A.15 1025 CB6648_redo II 12260333 1 C T 165 1.00 63 62 0 6 6 @TTTTTT point 0 SNP none haw30396 1026 CB6648_redo II 12266285 1 G T 107 1.00 63 62 7 11 18 @,,.,,..ttTttTtTTtT point 0 SNP none haw30403 1027 CB6648_redo II 12370055 1 C A 255 1.00 63 62 0 38 38 @AAAAAaAAaaaaaAAAaaaaaaAaAAAaaaAAAAAAAa point 0 SNP none haw30684 1028 CB6648_redo II 12387897 1 T A 255 1.00 63 62 0 48 48 @AAAAaaaaAAaAAAaaaaAAAaaaAAaaaaAaaaaaaaaaAaAAaAAa point 0 SNP none haw30711 1039 CB6648_redo II 12562077 1 A C 3 1.00 63 62 7 9 16 @CCccCcCCC,....,, point 0 nongenic -1903 upstream F49C5.12 1039 CB6648_redo II 12562077 1 A C 3 1.00 63 62 7 9 16 @CCccCcCCC,....,, point 0 nongenic -2020 upstream F49C5.6 1040 CB6648_redo II 12595553 1 C T 255 1.00 63 62 0 26 26 @TTTttTttTTTTtTTTTtTTtTtTtT point 0 SNP none haw31224 1041 CB6648_redo II 12601818 1 C T 255 1.00 63 62 0 77 77 @ttTTtttttTTTtTTTtTTTTTttTTtttTTttTtTTtTTTttttTTTTtttttTttTTtTtTtttTTttTTttttt point 0 nongenic -20836 upstream Y38E10A.5 1041 CB6648_redo II 12601818 1 C T 255 1.00 63 62 0 77 77 @ttTTtttttTTTtTTTtTTTTTttTTtttTTttTtTTtTTTttttTTTTtttttTttTTtTtTtttTTttTTttttt point 0 nongenic -4062 upstream Y38E10A.7 1041 CB6648_redo II 12601818 1 C T 255 1.00 63 62 0 77 77 @ttTTtttttTTTtTTTtTTTTTttTTtttTTttTtTTtTTTttttTTTTtttttTttTTtTtTtttTTttTTttttt point 0 nongenic 1776 into Y38E10A.6a,Y38E10A.6b 4217 CB6648_redo II 12656382 0 X X -1000 -999.99 -1000 -1000 11 -9 2 @,,.,,,.,,,,ccc indel 3 nongenic -12368 upstream Y38E10A.21 4217 CB6648_redo II 12656382 0 X X -1000 -999.99 -1000 -1000 11 -9 2 @,,.,,,.,,,,ccc indel 3 nongenic -1718 downstream Y38E10A.20 1053 CB6648_redo II 12658929 1 C T 255 1.00 63 62 0 27 27 @tTTtTTTtTTttTTtTTtTTtTtTTTt point 0 SNP none haw31398 1054 CB6648_redo II 12659508 1 A G 255 1.00 63 62 0 43 43 @GGGggGGgGGggGgGgGGGGGgGggGGGggGggGgGGggGGGg point 0 nongenic -9241 upstream Y38E10A.21 1054 CB6648_redo II 12659508 1 A G 255 1.00 63 62 0 43 43 @GGGggGGgGGggGgGgGGGGGgGggGGGggGggGgGGggGGGg point 0 nongenic 4241 into Y38E10A.20 1055 CB6648_redo II 12670938 1 A G 255 1.00 63 62 0 44 44 @GGggggGggggGGggggGggGGGggGgGggGGgGGGGggGgGGG point 0 SNP none haw31411 1056 CB6648_redo II 12677412 1 T G 255 1.00 63 62 0 18 18 @gGGGgggggGgGgGGGgg point 0 missense AAC->ACC[Asn->Thr] Y38E10A.23 1057 CB6648_redo II 12683679 1 A T 255 1.00 63 62 0 64 64 @ttTTttttTTtTTtTTtTTTTttTtTTtTtttTTTTttttTTtTTttTTTTttTTtTtTtTTtT point 0 nongenic -10640 upstream Y46G5A.1a,Y46G5A.1b 1057 CB6648_redo II 12683679 1 A T 255 1.00 63 62 0 64 64 @ttTTttttTTtTTtTTtTTTTttTtTTtTtttTTTTttttTTtTTttTTTTttTTtTtTtTTtT point 0 nongenic 2944 into Y46G5A.2 1058 CB6648_redo II 12684543 1 G A 255 1.00 63 62 0 58 58 @aAAAAaaaAAAAAAaAaaaaaaAaaaaaAAAaAaAaaaaaAaAaaaAaaAaaaaAaAa point 0 SNP none haw31456 1059 CB6648_redo II 12684928 1 G A 255 1.00 63 62 2 35 37 @aaaaaaaAaaAAAAAAAAaAAaAAAAAAAAA..AAAA point 0 SNP none haw31457 1060 CB6648_redo II 12717330 1 T G 87 1.00 63 62 5 9 14 @ggggggggg,,,,, point 0 nongenic 1717 into Y46G5A.1c 1060 CB6648_redo II 12717330 1 T G 87 1.00 63 62 5 9 14 @ggggggggg,,,,, point 0 nongenic 8041 into Y46G5A.1b 1060 CB6648_redo II 12717330 1 T G 87 1.00 63 62 5 9 14 @ggggggggg,,,,, point 0 nongenic 8062 into Y46G5A.1a 1061 CB6648_redo II 12749851 1 T C 166 8.44 63 62 611 -356 255 @C,,C.C,,,,C.c,,,C,,,,C,,...,CC,..,,,,,,...,,C,c.CC,CCC,...c...C,CCC,,C,,C....CC,C,,,C.c.C,,,C,,..., point 0 nongenic -11610 upstream Y46G5A.5 1062 CB6648_redo II 12764190 1 G C 255 1.00 63 62 0 64 64 @CCcccCcccCcCccCCCCccccccCCccCCCcccccccCcccCCcccccCccCcCccCCCcCcc point 0 SNP none haw31561 1063 CB6648_redo II 12764265 1 A T 26 1.00 63 6 4 7 11 @...,ttttTtT point 0 nongenic 2862 into Y46G5A.10 1067 CB6648_redo II 12784485 1 T C 255 1.00 63 62 0 21 21 @CcCcccccCcCCCCcCcCCCC point 0 SNP none haw31598 1068 CB6648_redo II 12798297 1 T C 7 1.69 63 0 3 4 7 @...CccC point 0 nongenic -1929 upstream Y46G5A.17.1 1069 CB6648_redo II 12803501 1 G A 4 1.06 63 62 21 21 42 @..............A..A...A..AAAAAAAAAAAAAAAAAA point 0 nongenic -1270 upstream Y46G5A.19a.2 1069 CB6648_redo II 12803501 1 G A 4 1.06 63 62 21 21 42 @..............A..A...A..AAAAAAAAAAAAAAAAAA point 0 nongenic -7133 upstream Y46G5A.17.1 1069 CB6648_redo II 12803501 1 G A 4 1.06 63 62 21 21 42 @..............A..A...A..AAAAAAAAAAAAAAAAAA point 0 nongenic 1671 into Y46G5A.18a,Y46G5A.18b 1070 CB6648_redo II 12817524 1 A C 92 1.00 63 62 0 4 4 @CcCc point 0 nongenic -1151 upstream Y46G5A.21 1070 CB6648_redo II 12817524 1 A C 92 1.00 63 62 0 4 4 @CcCc point 0 nongenic 736 into Y46G5A.22a 1070 CB6648_redo II 12817524 1 A C 92 1.00 63 62 0 4 4 @CcCc point 0 nongenic 776 into Y46G5A.22b 1073 CB6648_redo II 12829859 1 C A 255 2.12 63 62 0 20 20 @AAAaAaaAaaAAaaaAAaaA point 0 nongenic -756 upstream Y46G5A.24 1073 CB6648_redo II 12829859 1 C A 255 2.12 63 62 0 20 20 @AAAaAaaAaaAAaaaAAaaA point 0 nongenic -986 upstream Y46G5A.23 1090 CB6648_redo II 12919526 1 C T 255 1.50 63 62 0 44 44 @ttTTTttTtTtTtttTtTTTTtTTtttttttTTTtTttTTtTtt point 0 missense CCA->CTA[Pro->Leu] F58G1.1 4226 CB6648_redo II 13023501 1 X X -1000 -999.99 -1000 -1000 8 -4 4 @,,.,.... indel -1 SNP none uCE2-2163 1093 CB6648_redo II 13046466 1 G A 255 1.12 63 62 0 21 21 @AaAAaaaAaAAAAAAAAAAAA point 0 missense CCT->CTT[Pro->Leu] F42G4.7 1094 CB6648_redo II 13062610 1 T A 255 1.00 63 62 0 35 35 @AaagaaaAAAAaAaaAaAaaAaAaaaAaAAaAAAa point 0 SNP none haw31867 1095 CB6648_redo II 13063714 1 A G 96 1.00 63 36 1 7 8 @GGGGggg. point 0 SNP none snp_F42G4[4] 1096 CB6648_redo II 13090005 1 T A 255 1.00 63 62 0 39 39 @AaaaaaaaaAAaaaAAaaAaaaaAaAAAAaAaAaAAAaa point 0 missense GAT->GAA[Asp->Glu] Y81G3A.3 1097 CB6648_redo II 13092153 1 G C 255 5.31 63 62 0 31 31 @CccCCccCcCCcccccCCcccCCccccccCc point 0 SNP none snp_Y81G3A[1] 1098 CB6648_redo II 13092162 1 G T 255 2.12 63 62 0 29 29 @TTttTtTTtttttTTtttTTttttttTtt point 0 SNP none snp_Y81G3A[2] 1099 CB6648_redo II 13092217 1 G A 255 1.00 63 62 0 32 32 @aAaaaaaaAaAAAaAaaaaAaaAaaaAAaAaA point 0 SNP none haw31901,snp_Y81G3A[3] 1100 CB6648_redo II 13097749 1 C G 201 1.88 63 62 0 17 17 @GGGGGTGGGGGGGGGGG point 0 nongenic -1202 upstream Y81G3A.5b 1100 CB6648_redo II 13097749 1 C G 201 1.88 63 62 0 17 17 @GGGGGTGGGGGGGGGGG point 0 nongenic 407 downstream F29C12.3 1100 CB6648_redo II 13097749 1 C G 201 1.88 63 62 0 17 17 @GGGGGTGGGGGGGGGGG point 0 nongenic 435 into Y81G3A.5a 1101 CB6648_redo II 13200383 1 C T 255 1.00 63 62 0 39 39 @TttTtTTTttttTTTTtTtTTttTTttTtTTttTtTTTT point 0 nongenic -15614 upstream F15D4.2.1 1101 CB6648_redo II 13200383 1 C T 255 1.00 63 62 0 39 39 @TttTtTTTttttTTTTtTtTTttTTttTtTTttTtTTTT point 0 nongenic 305 into F15D4.1 1101 CB6648_redo II 13200383 1 C T 255 1.00 63 62 0 39 39 @TttTtTTTttttTTTTtTtTTttTTttTtTTttTtTTTT point 0 nongenic 996 downstream W09H1.6a,W09H1.6b 1102 CB6648_redo II 13239531 1 G C 255 1.00 63 62 0 42 42 @CCCCccCccccCcCCCcCcCCcCccCCCCCcCcCcCcCCCCC point 0 missense GAC->GAG[Asp->Glu] F15D4.4 1103 CB6648_redo II 13257257 1 C G 255 1.00 63 62 0 49 49 @GGGGGGGGGgGGGGGGGGGggGGGGGGGgGGGggggGggGGGgGggGgG point 0 nongenic -3145 upstream Y48C3A.1 1104 CB6648_redo II 13350116 1 C A 255 1.00 63 62 0 42 42 @aaaAAaaaAAaAAAaaAaaaaAaaAaaaAAAaAaAaaaAAAA point 0 SNP none haw32310 1105 CB6648_redo II 13378340 1 G A 255 1.00 63 62 0 35 35 @aAAAAAAAaAAAAAAaaAaAAAAAAaaAAAAAaaA point 0 SNP none haw32413 1108 CB6648_redo II 13408374 1 C A 255 1.00 63 62 0 28 28 @AaaaaaAAAAAAaaAAaaAAAaaaAAaA point 0 nongenic -4178 upstream Y48C3A.18a 1108 CB6648_redo II 13408374 1 C A 255 1.00 63 62 0 28 28 @AaaaaaAAAAAAaaAAaaAAAaaaAAaA point 0 nongenic 1162 into Y48C3A.17b 1108 CB6648_redo II 13408374 1 C A 255 1.00 63 62 0 28 28 @AaaaaaAAAAAAaaAAaaAAAaaaAAaA point 0 nongenic 2021 into Y48C3A.17c 1108 CB6648_redo II 13408374 1 C A 255 1.00 63 62 0 28 28 @AaaaaaAAAAAAaaAAaaAAAaaaAAaA point 0 nongenic 2307 into Y48C3A.17a,Y48C3A.17d 1109 CB6648_redo II 13434751 1 G T 255 4.00 63 62 0 18 18 @ttttttTtttTTttTttt point 0 nongenic 937 into Y48E1C.4a 1109 CB6648_redo II 13434751 1 G T 255 4.00 63 62 0 18 18 @ttttttTtttTTttTttt point 0 nongenic 948 into Y48E1C.4b 1110 CB6648_redo II 13434786 1 G T 241 6.56 63 62 0 10 10 @ttTttttTtT point 0 nongenic 972 into Y48E1C.4a 1110 CB6648_redo II 13434786 1 G T 241 6.56 63 62 0 10 10 @ttTttttTtT point 0 nongenic 983 into Y48E1C.4b 1117 CB6648_redo II 13440583 1 G T 255 1.00 63 62 0 17 17 @tTTTtttTtTtTTtTTT point 0 missense ACG->AAG[Thr->Lys] Y48E1C.3 1117 CB6648_redo II 13440583 1 G T 255 1.00 63 62 0 17 17 @tTTTtttTtTtTTtTTT point 0 SNP none haw32539 1118 CB6648_redo II 13452555 1 A G 255 2.00 63 62 0 56 56 @GGGGggGGgGGGGGgggGGgGGGGgggGGGgGGGggGGgGgGGggGgGGggGGGgg point 0 nongenic -5051 upstream E01G4.1 1118 CB6648_redo II 13452555 1 A G 255 2.00 63 62 0 56 56 @GGGGggGGgGGGGGgggGGgGGGGgggGGGgGGGggGGgGgGGggGgGGggGGGgg point 0 nongenic 3796 into E01G4.4 1119 CB6648_redo II 13485389 1 T C 255 1.00 63 62 0 31 31 @ccCCccCcccCCCcCccCCCCCCcccccccc point 0 silent TGT->TGC[Cys->Cys] E01G4.6 1120 CB6648_redo II 13528270 1 A G 255 1.00 63 62 0 21 21 @gGGGgGGGGGGGgGgGgGggg point 0 nongenic 2857 into Y48E1B.14a.2 1120 CB6648_redo II 13528270 1 A G 255 1.00 63 62 0 21 21 @gGGGgGGGGGGGgGgGgGggg point 0 nongenic 2859 into Y48E1B.14a.1 1120 CB6648_redo II 13528270 1 A G 255 1.00 63 62 0 21 21 @gGGGgGGGGGGGgGgGgGggg point 0 nongenic 689 into Y48E1B.14b 1121 CB6648_redo II 13578367 1 A G 255 1.00 63 62 0 66 66 @GGgGgGgGGGgGGGGGGGgggGggggGGGGGGgGGggGGGGcGGGGgGGgggGGggggggGcGGgg point 0 nongenic -3397 upstream Y48E1B.5 1121 CB6648_redo II 13578367 1 A G 255 1.00 63 62 0 66 66 @GGgGgGgGGGgGGGGGGGgggGggggGGGGGGgGGggGGGGcGGGGgGGgggGGggggggGcGGgg point 0 nongenic -7267 upstream Y48E1B.8 1121 CB6648_redo II 13578367 1 A G 255 1.00 63 62 0 66 66 @GGgGgGgGGGgGGGGGGGgggGggggGGGGGGgGGggGGGGcGGGGgGGgggGGggggggGcGGgg point 0 nongenic 2535 into Y48E1B.7 4230 CB6648_redo II 13697890 0 X X -1000 -999.99 -1000 -1000 6 -5 1 @.,,,,, indel 4 nongenic -1635 downstream Y54G9A.3a 4230 CB6648_redo II 13697890 0 X X -1000 -999.99 -1000 -1000 6 -5 1 @.,,,,, indel 4 nongenic -3200 upstream Y48E1A.1a 4230 CB6648_redo II 13697890 0 X X -1000 -999.99 -1000 -1000 6 -5 1 @.,,,,, indel 4 nongenic -9486 upstream Y54G9A.3b 1125 CB6648_redo II 13697891 1 G C 95 1.00 63 0 0 6 6 @cCCCCC point 0 SNP none snp_Y54G9A[1] 1126 CB6648_redo II 13697893 1 G C 41 1.00 63 0 0 5 5 @CCCCC point 0 nongenic -3203 upstream Y48E1A.1a 1126 CB6648_redo II 13697893 1 G C 41 1.00 63 0 0 5 5 @CCCCC point 0 nongenic -9482 upstream Y54G9A.3b 1126 CB6648_redo II 13697893 1 G C 41 1.00 63 0 0 5 5 @CCCCC point 0 nongenic 1639 into Y54G9A.3a 160818 CB6648_redo II 13702235 55 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered 1551 bp upstream to 1496 bp upstream (0 % of 622 codons) Y54G9A.3a 1132 CB6648_redo II 13722005 1 C A 255 1.06 63 62 0 28 28 @aAaAAaaAaaaaAAAAAaAaaAaAAAaa point 0 SNP none haw33062 1133 CB6648_redo II 13738653 1 T A 30 1.19 63 62 2 3 5 @..AAA point 0 nongenic -3007 upstream R06B9.6 1135 CB6648_redo II 13801366 1 C A 255 1.00 63 62 0 35 35 @aaaaaaAaAaAaaAaaaaaaAaaaaaAaaaAAaaa point 0 SNP none haw33213 1136 CB6648_redo II 13883905 1 A G 156 1.00 63 62 1 7 8 @.GggGgGg point 0 nongenic -4657 upstream Y51H1A.6a 1136 CB6648_redo II 13883905 1 A G 156 1.00 63 62 1 7 8 @.GggGgGg point 0 nongenic 1295 into Y51H1A.5.2 1136 CB6648_redo II 13883905 1 A G 156 1.00 63 62 1 7 8 @.GggGgGg point 0 nongenic 1296 into Y51H1A.5.1 1137 CB6648_redo II 13883906 1 G T 203 1.00 63 62 0 8 8 @TttTtTtT point 0 nongenic -4656 upstream Y51H1A.6a 1137 CB6648_redo II 13883906 1 G T 203 1.00 63 62 0 8 8 @TttTtTtT point 0 nongenic 1296 into Y51H1A.5.2 1137 CB6648_redo II 13883906 1 G T 203 1.00 63 62 0 8 8 @TttTtTtT point 0 nongenic 1297 into Y51H1A.5.1 1142 CB6648_redo II 13962024 1 C T 255 1.00 63 62 0 26 26 @tTTTTTtTtTTtTTTTTtttttTtTt point 0 missense GAT->AAT[Asp->Asn] W07G1.5a,W07G1.5b 1144 CB6648_redo II 13985375 1 G T 24 4.75 0 2 0 22 22 @TtTTTTTTTTttTtTTTTTTtt point 0 nongenic -819 upstream Y39G8B.4 1152 CB6648_redo II 14171676 1 C T 255 1.00 63 62 0 45 45 @tttttTTttttTTTttTttTTTtTTttttttTtTTtttttttTtt point 0 SNP none haw33776 1153 CB6648_redo II 14211019 1 C G 255 1.00 63 62 0 29 29 @gGgGggGgGGGGGgggggGGggggGGGGG point 0 SNP none haw33827 1154 CB6648_redo II 14260657 1 A C 255 2.94 63 62 0 16 16 @CCCCCCcCcCcCCccc point 0 nongenic -15895 upstream Y54G11A.3 1154 CB6648_redo II 14260657 1 A C 255 2.94 63 62 0 16 16 @CCCCCCcCcCcCCccc point 0 nongenic 4405 into Y54G11A.1 1155 CB6648_redo II 14261823 1 G C 223 1.00 63 62 0 8 8 @CccccCCC point 0 SNP none haw33932 4233 CB6648_redo II 14267620 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,..GG indel 0 nongenic -1436 downstream Y54G11A.1 4233 CB6648_redo II 14267620 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,..GG indel 0 nongenic -8933 upstream Y54G11A.3 1156 CB6648_redo II 14276713 1 T C 255 1.00 63 62 0 23 23 @cCCCCcccCcCCCcCCccCcCCC point 0 silent TTG->CTG[Leu->Leu] Y54G11A.3 1156 CB6648_redo II 14276713 1 T C 255 1.00 63 62 0 23 23 @cCCCCcccCcCCCcCCccCcCCC point 0 SNP none haw33969 1157 CB6648_redo II 14279456 1 C A 191 5.69 63 62 0 35 35 @GaaaAAAAAAaaAaAaaAAaAAAAAaaAaaaaaaA point 0 nongenic -10400 upstream Y54G11A.1 1157 CB6648_redo II 14279456 1 C A 191 5.69 63 62 0 35 35 @GaaaAAAAAAaaAaAaaAAaAAAAAaaAaaaaaaA point 0 nongenic 2904 into Y54G11A.3 1158 CB6648_redo II 14311576 1 T C 255 1.00 63 62 0 50 50 @CCcCcccCCcccCcCccCcccccCCcccccccCccccCccCcccCccCcc point 0 nongenic -6483 upstream Y54G11A.14 1158 CB6648_redo II 14311576 1 T C 255 1.00 63 62 0 50 50 @CCcCcccCCcccCcCccCcccccCCcccccccCccccCccCcccCccCcc point 0 nongenic -894 upstream Y54G11A.13 1173 CB6648_redo II 14406898 1 T C 255 1.00 63 62 0 38 38 @CCcCcccCcCcccCccCccCCcCCcCCCCCcCccCCcc point 0 silent TTT->TTC[Phe->Phe] F26H11.2c,F26H11.2d.1,F26H11.2d.2,F26H11.2e,F26H11.2f,F26H11.2g 1173 CB6648_redo II 14406898 1 T C 255 1.00 63 62 0 38 38 @CCcCcccCcCcccCccCccCCcCCcCCCCCcCccCCcc point 0 SNP none snp_F26H11[1] 1174 CB6648_redo II 14483373 1 G A 255 1.00 63 62 0 28 28 @AaAAaaAaaaaaAaAaaaaaaAaAAaaa point 0 nongenic -3843 upstream C13B4.1a,C13B4.1b.1,C13B4.1b.2 1175 CB6648_redo II 14577321 1 C T 255 1.00 63 62 0 52 52 @ttTTTttTTttttttTtTTTtTTttTtTtTTtttTttTtTTTTtTttttttT point 0 silent AAC->AAT[Asn->Asn] C01G12.13 4236 CB6648_redo II 14614150 5 X X -1000 -999.99 -1000 -1000 18 -17 1 @,,....,,.,,,,,..,. indel -5 SNP none snp_F19H8[2] 1180 CB6648_redo II 14683303 1 C T 255 1.00 63 62 0 39 39 @TttttTtTTTtttTTtTTTTTtTTtTttTtttTTtTTTt point 0 missense GTT->ATT[Val->Ile] K02B7.4 1181 CB6648_redo II 14796259 1 G T 255 1.00 63 62 0 41 41 @TTtTtttTTTTTTTTttTTtTTtTtttTtTtttTTTTtTTT point 0 missense GGG->GTG[Gly->Val] Y54E2A.11b.1,Y54E2A.11b.2 1181 CB6648_redo II 14796259 1 G T 255 1.00 63 62 0 41 41 @TTtTtttTTTTTTTTttTTtTTtTtttTtTtttTTTTtTTT point 0 missense TGG->TGT[Trp->Cys] Y54E2A.11a.1,Y54E2A.11a.2 1181 CB6648_redo II 14796259 1 G T 255 1.00 63 62 0 41 41 @TTtTtttTTTTTTTTttTTtTTtTtttTtTtttTTTTtTTT point 0 SNP none uCE2-2369 1182 CB6648_redo II 14856846 1 G A 255 1.00 63 62 0 38 38 @aaaaaaaAaAaaaaaACaaaAaaAaaaAAAaAaAAaAA point 0 missense GAT->AAT[Asp->Asn] R05H10.7 1183 CB6648_redo II 14872831 1 C A 255 1.00 63 62 0 30 30 @aaaAaAaaaaAaaAaaaaAaaaAaaaaaaa point 0 nongenic 2986 into R05H10.3a,R05H10.3b 1184 CB6648_redo II 14877004 1 T A 255 1.00 63 62 0 40 40 @aaAaAaaaaAaaaaaaAAaAAAaAaAAaAAaAAAAaaaAa point 0 nongenic -25390 upstream R03C1.3a 1184 CB6648_redo II 14877004 1 T A 255 1.00 63 62 0 40 40 @aaAaAaaaaAaaaaaaAAaAAAaAaAAaAAaAAAAaaaAa point 0 nongenic -57 upstream Y53F4A.2 1184 CB6648_redo II 14877004 1 T A 255 1.00 63 62 0 40 40 @aaAaAaaaaAaaaaaaAAaAAAaAaAAaAAaAAAAaaaAa point 0 nongenic 5655 into R05H10.3b 1184 CB6648_redo II 14877004 1 T A 255 1.00 63 62 0 40 40 @aaAaAaaaaAaaaaaaAAaAAAaAaAAaAAaAAAAaaaAa point 0 nongenic 5937 into R05H10.3a 1186 CB6648_redo II 14993339 1 T C 82 2.94 63 62 32 66 98 @CC,.C,.C.,,C,CC..CCCCCCC,CC.CCcC.c.C...cCCcc.,.CccCCc.ccCCCCCcccCC,Ccc,CC..cCCcccCcc.ccCccC.c.,,.. point 0 nongenic 33 downstream Y53F4B.7 1187 CB6648_redo II 14993590 1 G T 61 9.62 63 62 30 36 66 @,.tt...t..t...ttt,.,ttt.,tt,t.ttt,ttt,ttTt.,,..tt...ttt,ttt,,ttttt point 0 nongenic 284 downstream Y53F4B.7 1189 CB6648_redo II 15043614 1 C T 255 1.38 63 62 0 24 24 @tTTTTTtttTttttTtTTttTttT point 0 ncRNA none Y53F4B.45 1190 CB6648_redo II 15043625 1 C G 255 1.31 63 62 0 22 22 @gGggggGgGGggGggGggGGGg point 0 ncRNA none Y53F4B.45 1191 CB6648_redo II 15048466 1 C T 255 1.00 63 62 0 27 27 @TTtTTTTTTTTTTtTTtTTtTttTTTt point 0 nongenic 341 into Y53F4B.15 1192 CB6648_redo II 15056156 1 C T 255 1.00 63 62 0 9 9 @TTTtTttTT point 0 nongenic -1972 upstream Y53F4B.17 1192 CB6648_redo II 15056156 1 C T 255 1.00 63 62 0 9 9 @TTTtTttTT point 0 nongenic -535 upstream Y53F4B.16 1193 CB6648_redo II 15073258 1 T A 226 7.44 63 62 0 26 26 @AAAAAAAAAAaAAaAAaAAAAAaAAa point 0 nongenic -1689 upstream Y53F4B.18 1193 CB6648_redo II 15073258 1 T A 226 7.44 63 62 0 26 26 @AAAAAAAAAAaAAaAAaAAAAAaAAa point 0 nongenic -3916 upstream Y53F4B.19 1197 CB6648_redo II 15155490 1 G A 255 1.00 63 62 0 36 36 @aaaaaaaAaAaaaaaaaaaaaaAAaaaaaaAaAaAa point 0 nongenic -2594 upstream Y53F4B.28 1198 CB6648_redo II 15165205 1 C T 255 1.00 63 62 0 48 48 @TTTTtTTTTTTtTtTTtttTtttTTttTttTTttTtTTtttTtTTttT point 0 premature_stop TGG->TGA[Trp->stop] Y53F4B.30 1202 CB6648_redo III 118298 1 T G 255 1.00 63 62 0 40 40 @GgGGGGGgGGgGGgGGgGgggggGgggGGggggggggGgg point 0 silent GTT->GTG[Val->Val] C29F9.5 1203 CB6648_redo III 199134 1 T A 47 1.44 63 62 2 5 7 @,aa,aaA point 0 nongenic 1090 into F40G9.1 1204 CB6648_redo III 277155 1 G A 255 1.00 63 62 0 37 37 @AaAAaAAAaAaAAAaAAaaaAAaaaAAaAAaaaaAaa point 0 nongenic -6960 upstream Y50D7A.9 1204 CB6648_redo III 277155 1 G A 255 1.00 63 62 0 37 37 @AaAAaAAAaAaAAAaAAaaaAAaaaAAaAAaaaaAaa point 0 nongenic 5727 into Y50D7A.2 1212 CB6648_redo III 346575 1 C A 35 9.88 63 62 36 36 72 @,...,,.,...,,....,,.......,....AAAaaAAAaAAaaaA,AA.AAAAaaaaaAAA.AAAa.A,Aa point 0 nongenic -3334 upstream Y50D7A.8 1212 CB6648_redo III 346575 1 C A 35 9.88 63 62 36 36 72 @,...,,.,...,,....,,.......,....AAAaaAAAaAAaaaA,AA.AAAAaaaaaAAA.AAAa.A,Aa point 0 nongenic 1638 into W07B3.2a.2,W07B3.2b,W07B3.2c.2,W07B3.2f 1212 CB6648_redo III 346575 1 C A 35 9.88 63 62 36 36 72 @,...,,.,...,,....,,.......,....AAAaaAAAaAAaaaA,AA.AAAAaaaaaAAA.AAAa.A,Aa point 0 nongenic 1769 into W07B3.2d 1212 CB6648_redo III 346575 1 C A 35 9.88 63 62 36 36 72 @,...,,.,...,,....,,.......,....AAAaaAAAaAAaaaA,AA.AAAAaaaaaAAA.AAAa.A,Aa point 0 nongenic 1791 into W07B3.2c.1 1212 CB6648_redo III 346575 1 C A 35 9.88 63 62 36 36 72 @,...,,.,...,,....,,.......,....AAAaaAAAaAAaaaA,AA.AAAAaaaaaAAA.AAAa.A,Aa point 0 nongenic 1858 into W07B3.2a.1 1221 CB6648_redo III 467994 1 G A 54 1.00 63 62 8 16 24 @,,aa,aa,aaa,aaaaaa,,aa,a point 0 nongenic -4276 upstream Y55B1BR.6 1221 CB6648_redo III 467994 1 G A 54 1.00 63 62 8 16 24 @,,aa,aa,aaa,aaaaaa,,aa,a point 0 nongenic -4305 upstream F10C5.2.1 1221 CB6648_redo III 467994 1 G A 54 1.00 63 62 8 16 24 @,,aa,aa,aaa,aaaaaa,,aa,a point 0 nongenic 3130 into Y55B1BR.4 1222 CB6648_redo III 480232 1 G C 137 1.00 63 2 1 6 7 @CCccCC, point 0 nongenic 2074 into F10C5.1 1223 CB6648_redo III 480234 1 T G 3 1.19 63 62 3 5 8 @GggGG,.. point 0 nongenic 2072 into F10C5.1 1232 CB6648_redo III 513526 1 A G 45 1.00 63 4 0 4 4 @ggGg point 0 SNP none uCE3-597 1233 CB6648_redo III 543651 1 T G 22 1.00 63 26 3 3 6 @,,,GGg point 0 nongenic -13863 upstream B0353.1b 1233 CB6648_redo III 543651 1 T G 22 1.00 63 26 3 3 6 @,,,GGg point 0 nongenic -16737 upstream T22F7.4 1233 CB6648_redo III 543651 1 T G 22 1.00 63 26 3 3 6 @,,,GGg point 0 nongenic 1588 into T22F7.1 1234 CB6648_redo III 543652 1 G C 27 1.00 63 22 3 3 6 @,,,CCc point 0 nongenic -13862 upstream B0353.1b 1234 CB6648_redo III 543652 1 G C 27 1.00 63 22 3 3 6 @,,,CCc point 0 nongenic -16738 upstream T22F7.4 1234 CB6648_redo III 543652 1 G C 27 1.00 63 22 3 3 6 @,,,CCc point 0 nongenic 1589 into T22F7.1 1235 CB6648_redo III 628763 1 A C 81 9.25 63 50 0 12 12 @CCCCCCCccCCC point 0 nongenic -951 upstream T19C3.5 1235 CB6648_redo III 628763 1 A C 81 9.25 63 50 0 12 12 @CCCCCCCccCCC point 0 nongenic 592 into T19C3.6 1236 CB6648_redo III 661018 1 A G 28 1.00 63 60 3 4 7 @GGGG... point 0 silent AGA->AGG[Arg->Arg] C09F5.1 1239 CB6648_redo III 691185 1 C T 255 1.00 63 62 0 41 41 @TTTTttTTTTTTtTTTTTTTTTTTTTtTTTtTTTTTTTttt point 0 silent GAG->GAA[Glu->Glu] W02B3.7 1239 CB6648_redo III 691185 1 C T 255 1.00 63 62 0 41 41 @TTTTttTTTTTTtTTTTTTTTTTTTTtTTTtTTTTTTTttt point 0 SNP none haw37341 1240 CB6648_redo III 703550 1 T C 140 7.12 63 62 6 19 25 @,,Cccccc,,,cccCccCcCcCCC, point 0 nongenic -2777 upstream C24A1.2a 1240 CB6648_redo III 703550 1 T C 140 7.12 63 62 6 19 25 @,,Cccccc,,,cccCccCcCcCCC, point 0 nongenic -7099 upstream C24A1.3b 1240 CB6648_redo III 703550 1 T C 140 7.12 63 62 6 19 25 @,,Cccccc,,,cccCccCcCcCCC, point 0 nongenic 12285 into C24A1.2b 1242 CB6648_redo III 705103 1 G C 95 3.19 63 62 3 8 11 @CCCCCcCC.., point 0 nongenic -1224 upstream C24A1.2a 1242 CB6648_redo III 705103 1 G C 95 3.19 63 62 3 8 11 @CCCCCcCC.., point 0 nongenic -8652 upstream C24A1.3b 1242 CB6648_redo III 705103 1 G C 95 3.19 63 62 3 8 11 @CCCCCcCC.., point 0 nongenic 10732 into C24A1.2b 1243 CB6648_redo III 712134 1 A G 27 1.00 63 28 3 3 6 @GgC,.. point 0 nongenic -12881 upstream C24A1.1.1 1243 CB6648_redo III 712134 1 A G 27 1.00 63 28 3 3 6 @GgC,.. point 0 nongenic -15683 upstream C24A1.3b 1243 CB6648_redo III 712134 1 A G 27 1.00 63 28 3 3 6 @GgC,.. point 0 nongenic 3388 into C24A1.2a 1243 CB6648_redo III 712134 1 A G 27 1.00 63 28 3 3 6 @GgC,.. point 0 nongenic 3701 into C24A1.2b 1244 CB6648_redo III 752175 1 G T 255 1.00 63 62 0 38 38 @TtttttttttTtTTttTTtTTtTttTttTttTTtTTTt point 0 nongenic -5489 upstream T17H7.4a.1,T17H7.4a.2,T17H7.4b.1,T17H7.4b.2,T17H7.4c.1,T17H7.4c.2,T17H7.4g.2 1244 CB6648_redo III 752175 1 G T 255 1.00 63 62 0 38 38 @TtttttttttTtTTttTTtTTtTttTttTttTTtTTTt point 0 nongenic 246 into T17H7.4a.3,T17H7.4b.3,T17H7.4c.3,T17H7.4j 1254 CB6648_redo III 803906 1 G T 14 1.00 63 62 4 5 9 @,,,.Ttttt point 0 nongenic -7914 upstream B0412.2 1254 CB6648_redo III 803906 1 G T 14 1.00 63 62 4 5 9 @,,,.Ttttt point 0 nongenic 5449 into B0412.3.2 1254 CB6648_redo III 803906 1 G T 14 1.00 63 62 4 5 9 @,,,.Ttttt point 0 nongenic 5528 into B0412.3.1 4249 CB6648_redo III 871577 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @....Gg indel 0 nongenic -1728 upstream T24C4.2 4249 CB6648_redo III 871577 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @....Gg indel 0 nongenic 193 downstream T24C4.3 4250 CB6648_redo III 1028769 0 X X -1000 -999.99 -1000 -1000 5 -1 4 @,,...TTt indel 0 nongenic -366 upstream Y34F4.5 4250 CB6648_redo III 1028769 0 X X -1000 -999.99 -1000 -1000 5 -1 4 @,,...TTt indel 0 nongenic 21 downstream E_BE45912.2 1267 CB6648_redo III 1107973 1 A T 255 1.00 63 62 0 14 14 @TtTtTttTTTTtTT point 0 nongenic 3939 into F58B6.2 1277 CB6648_redo III 1318411 1 C G 255 1.12 63 62 0 34 34 @GGGGgGGgggGgGGGgGGggGggGGGgGGGgggG point 0 SNP none haw38527 1278 CB6648_redo III 1323866 1 G A 255 1.00 63 62 0 28 28 @aaaaaAAaaaaaaaaAaaaaAaaAAAaa point 0 nongenic -178 upstream Y82E9BL.10 1278 CB6648_redo III 1323866 1 G A 255 1.00 63 62 0 28 28 @aaaaaAAaaaaaaaaAaaaaAaaAAAaa point 0 nongenic -4767 upstream Y82E9BL.18 160820 CB6648_redo III 1567807 67 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 9017 to 9084 bp into Y67D2.2 1282 CB6648_redo III 1579536 1 T A 255 5.81 63 62 8 30 38 @,,a,a,,A,,aaa,AaAAAaAaaaAaaaAaaAAaAaAa point 0 nongenic 1249 into Y22D7AL.7 1283 CB6648_redo III 1579537 1 A T 255 5.50 63 62 7 30 37 @,t,t,,T,,ttt,TtTTTtTtttTtttTttTTtTtTt point 0 nongenic 1248 into Y22D7AL.7 1284 CB6648_redo III 1629052 1 C T 255 1.00 63 62 0 37 37 @tTTTtTTtttttTttTttTTttTttTttTTTtttttT point 0 SNP none haw39277 1285 CB6648_redo III 1636696 1 G A 255 1.00 63 62 0 23 23 @AaAAAaaaAAAaaAAaAaAaAAA point 0 SNP none haw39295 1286 CB6648_redo III 1636742 1 C A 255 1.00 63 62 0 18 18 @AAAAaAaAaAAAAAaaAa point 0 SNP none haw39297 1287 CB6648_redo III 1636775 1 G A 255 1.00 63 62 0 15 15 @aAaaAaaaAaAAAAa point 0 SNP none haw39298 1288 CB6648_redo III 1636782 1 G T 255 1.00 63 62 0 16 16 @ttTtttTtTTTTtttt point 0 SNP none haw39299 1290 CB6648_redo III 1863224 1 G T 255 1.75 63 62 0 56 56 @CTtttTTtttTtTTTTtTTtTTTtTTttTTTtTTTtttTTTtttTtTTttTTtTTT point 0 SNP none haw39736 1293 CB6648_redo III 2282476 1 G T 49 1.62 63 62 31 48 79 @tTTTTttTttTTtTttTttTTTTTTTTTTTtT,..,,,,.tT,,,TtT.,t.ttt.TTTT..t,.,,T,t....,.,.. point 0 nongenic -8964 upstream Y54F10BM.15 1293 CB6648_redo III 2282476 1 G T 49 1.62 63 62 31 48 79 @tTTTTttTttTTtTttTttTTTTTTTTTTTtT,..,,,,.tT,,,TtT.,t.ttt.TTTT..t,.,,T,t....,.,.. point 0 nongenic 5211 into Y54F10BM.3 1294 CB6648_redo III 2327180 1 C A 130 1.00 63 62 2 7 9 @AaaaaaA.. point 0 nongenic 273 into Y54F10BM.12 1294 CB6648_redo III 2327180 1 C A 130 1.00 63 62 2 7 9 @AaaaaaA.. point 0 nongenic 291 downstream Y54F10BM.2 1295 CB6648_redo III 2327186 1 G A 139 1.00 63 62 0 7 7 @AaaAaAa point 0 nongenic 279 into Y54F10BM.12 1295 CB6648_redo III 2327186 1 G A 139 1.00 63 62 0 7 7 @AaaAaAa point 0 nongenic 297 downstream Y54F10BM.2 1310 CB6648_redo III 2388431 1 T C 64 1.00 63 58 0 4 4 @CCcc point 0 SNP none pas2305 1311 CB6648_redo III 2405323 1 C T 255 1.00 63 62 0 31 31 @TTtttttTTTtTTtttTTTTtTttTTTtTTT point 0 SNP none haw40696 160821 CB6648_redo III 2564742 170 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2702 to 2872 bp into Y54F10AM.1 1320 CB6648_redo III 2565617 1 G A 255 1.06 63 62 0 50 50 @aAaaAaaAaaAaaaAAaaAaaaAAaaaaaAAaAAaAAAaAAAaAaaAaaa point 0 nongenic -1638 upstream Y54F10AM.11 1320 CB6648_redo III 2565617 1 G A 255 1.06 63 62 0 50 50 @aAaaAaaAaaAaaaAAaaAaaaAAaaaaaAAaAAaAAAaAAAaAaaAaaa point 0 nongenic 556 into Y54F10AM.1 1325 CB6648_redo III 2653185 1 A C 238 1.00 63 62 0 9 9 @cccccCCCC point 0 nongenic -4887 upstream H19M22.2a,H19M22.2b,H19M22.2d 1326 CB6648_redo III 2653187 1 A C 201 1.00 63 62 0 8 8 @ccccCCCC point 0 nongenic -4885 upstream H19M22.2a,H19M22.2b,H19M22.2d 1330 CB6648_redo III 2701751 1 A T 248 1.00 63 62 0 10 10 @TTTTTTtTTt point 0 SNP none haw41217 1331 CB6648_redo III 2728181 1 A T 255 1.00 63 62 0 26 26 @TTTTTTtTTTTTTtTTtTTTTTtTTt point 0 SNP none haw41299 1332 CB6648_redo III 2728812 1 G T 255 1.38 63 62 0 22 22 @TtttTtttttttTttttttTtt point 0 nongenic -3729 upstream Y71H2AM.11 1332 CB6648_redo III 2728812 1 G T 255 1.38 63 62 0 22 22 @TtttTtttttttTttttttTtt point 0 nongenic 2712 into Y71H2AM.7 1334 CB6648_redo III 2809673 1 A G 255 1.00 63 62 0 12 12 @gggGgGGGGGGG point 0 nongenic 1320 into Y71H2AM.3 1339 CB6648_redo III 2980599 1 A T 255 1.00 63 62 0 39 39 @TTttttTttTtTTTtTttTTTttTtTTTtTTTtTTtttT point 0 SNP none haw41691 1343 CB6648_redo III 3162633 1 A G 255 1.00 63 62 0 18 18 @GGgGggGGggGGGGggGG point 0 nongenic -3640 upstream R148.5a,R148.5b 1344 CB6648_redo III 3162638 1 A G 255 1.00 63 62 0 20 20 @GgGggGGggGGGGggGGGgg point 0 nongenic -3635 upstream R148.5a,R148.5b 1345 CB6648_redo III 3252687 1 G T 255 1.00 63 62 0 33 33 @TtttTTtttTTttTTTTTTtTttTtTTtTTTTT point 0 nongenic -2701 upstream Y53G8AL.4 1345 CB6648_redo III 3252687 1 G T 255 1.00 63 62 0 33 33 @TtttTTtttTTttTTTTTTtTttTtTTtTTTTT point 0 nongenic 446 into Y53G8AL.3 1346 CB6648_redo III 3254400 1 G C 255 1.12 63 62 0 21 21 @cCCcccCCCCCcCCCcCCccc point 0 nongenic -1267 upstream Y53G8AL.3 1346 CB6648_redo III 3254400 1 G C 255 1.12 63 62 0 21 21 @cCCcccCCCCCcCCCcCCccc point 0 nongenic 386 into Y53G8AM.4 1347 CB6648_redo III 3255111 1 C A 255 1.00 63 62 0 15 15 @AaaAaAaaAaaaAaa point 0 SNP none haw42163 1348 CB6648_redo III 3255125 1 C T 255 1.00 63 62 0 21 21 @TtttTtttttTtTtTTTttTT point 0 SNP none haw42164 1349 CB6648_redo III 3255131 1 G T 255 1.00 63 62 0 21 21 @ttttTtTtTTTttTTTTTTTT point 0 nongenic -1998 upstream Y53G8AL.3 1349 CB6648_redo III 3255131 1 G T 255 1.00 63 62 0 21 21 @ttttTtTtTTTttTTTTTTTT point 0 nongenic 478 into Y53G8AM.4 1350 CB6648_redo III 3271710 1 A G 255 1.00 63 62 0 20 20 @GggggGgggggggggggggg point 0 SNP none haw42190 1351 CB6648_redo III 3271738 1 T A 255 1.00 63 62 0 21 21 @aaaaaaaaaaAaaAAAAaAAA point 0 SNP none haw42191 1370 CB6648_redo III 3281311 1 T C 57 1.00 63 62 2 5 7 @ccccc,, point 0 nongenic -2623 upstream Y53G8AM.8.1,Y53G8AM.8.2 1370 CB6648_redo III 3281311 1 T C 57 1.00 63 62 2 5 7 @ccccc,, point 0 nongenic -985 upstream Y53G8AR.7a 1371 CB6648_redo III 3304492 1 A T 73 1.00 63 62 1 4 5 @.tttT point 0 nongenic -6959 upstream Y53G8AR.3 1372 CB6648_redo III 3339896 1 C G 38 1.00 63 62 1 3 4 @ggG, point 0 nongenic -4968 upstream F45H7.2a,F45H7.2b 1373 CB6648_redo III 3346937 1 C G 71 1.00 63 62 2 5 7 @gGGgG.. point 0 nongenic -14183 upstream F45H7.2c 1373 CB6648_redo III 3346937 1 C G 71 1.00 63 62 2 5 7 @gGGgG.. point 0 nongenic 2073 into F45H7.2a,F45H7.2b 1374 CB6648_redo III 3347670 1 A G 48 1.00 63 32 0 4 4 @GGGG point 0 nongenic -13450 upstream F45H7.2c 1374 CB6648_redo III 3347670 1 A G 48 1.00 63 32 0 4 4 @GGGG point 0 nongenic 2806 into F45H7.2a,F45H7.2b 1375 CB6648_redo III 3347671 1 G A 48 1.00 63 32 0 4 4 @AAAA point 0 nongenic -13449 upstream F45H7.2c 1375 CB6648_redo III 3347671 1 G A 48 1.00 63 32 0 4 4 @AAAA point 0 nongenic 2807 into F45H7.2a,F45H7.2b 1380 CB6648_redo III 3373714 1 G A 255 1.00 63 62 0 36 36 @AAAAaaAaAAAAaAaaAAaAaAaaaAaaaaaAaAAa point 0 SNP none haw42340 1388 CB6648_redo III 3387032 1 T C 255 1.81 63 62 0 24 24 @CcCCccCccCcCcccccccccccc point 0 missense AAC->AGC[Asn->Ser] C56G7.2 4263 CB6648_redo III 3390531 0 X X -1000 -999.99 -1000 -1000 5 -2 3 @,,,,,gGg indel 0 nongenic -573 upstream C56G7.2 4263 CB6648_redo III 3390531 0 X X -1000 -999.99 -1000 -1000 5 -2 3 @,,,,,gGg indel 0 nongenic -623 downstream C56G7.3 1389 CB6648_redo III 3429127 1 A C 213 5.81 63 62 0 16 16 @cccccccccccccccc point 0 nongenic 721 into K01A11.1 4265 CB6648_redo III 3430900 0 X X -1000 -999.99 -1000 -1000 6 -1 5 @,.....ccc indel 0 nongenic -439 downstream K01A11.1 1392 CB6648_redo III 3436724 1 T G 21 1.00 63 48 3 4 7 @...GggG point 0 nongenic -5385 upstream K01A11.1 1399 CB6648_redo III 3463329 1 C G 255 1.00 63 62 0 44 44 @GGgGgGGGGGgGgggGGggGGggggggGgGGgggGgGGGGGGGG point 0 SNP none haw42422 1400 CB6648_redo III 3466299 1 G A 10 1.00 63 62 4 4 8 @AAAA.,,. point 0 nongenic 1349 into C34C12.3 1401 CB6648_redo III 3467137 1 T C 255 1.00 63 62 0 64 64 @CcCCCCCCCCCcCCCCCcCccCcCCcCCCCcCcCCCCCcCCcCCCcCcCCCCccCcCCCcCCCC point 0 SNP none haw42435 1401 CB6648_redo III 3467137 1 T C 255 1.00 63 62 0 64 64 @CcCCCCCCCCCcCCCCCcCccCcCCcCCCCcCcCCCCCcCCcCCCcCcCCCCccCcCCCcCCCC point 0 three_prime_UTR none C34C12.3 1402 CB6648_redo III 3467466 1 C T 255 1.00 63 62 0 60 60 @TttTttttTTtTtttTTTtTtttTttTTTTTttTttTtttTtttTTtttttTTtTTtttT point 0 SNP none haw42438 1402 CB6648_redo III 3467466 1 C T 255 1.00 63 62 0 60 60 @TttTttttTTtTtttTTTtTtttTttTTTTTttTttTtttTtttTTtttttTTtTTtttT point 0 three_prime_UTR none C34C12.3 1405 CB6648_redo III 3468663 1 A C 255 1.00 63 62 0 25 25 @cccccCcccccccCCcCccCcCCcC point 0 nongenic -3324 upstream C34C12.5.1,C34C12.5.2 1405 CB6648_redo III 3468663 1 A C 255 1.00 63 62 0 25 25 @cccccCcccccccCCcCccCcCCcC point 0 nongenic 1013 into C34C12.4.1 1405 CB6648_redo III 3468663 1 A C 255 1.00 63 62 0 25 25 @cccccCcccccccCCcCccCcCCcC point 0 nongenic 972 into C34C12.4.2 1406 CB6648_redo III 3517342 1 C T 178 9.00 63 62 0 12 12 @TttTtTtTtTtt point 0 nongenic -595 upstream M01F1.5.2 1406 CB6648_redo III 3517342 1 C T 178 9.00 63 62 0 12 12 @TttTtTtTtTtt point 0 nongenic 2250 into M01F1.5.1 1409 CB6648_redo III 3517372 1 A G 103 5.00 63 62 0 4 4 @gggg point 0 nongenic -625 upstream M01F1.5.2 1409 CB6648_redo III 3517372 1 A G 103 5.00 63 62 0 4 4 @gggg point 0 nongenic 2220 into M01F1.5.1 1410 CB6648_redo III 3517380 1 A G 157 3.88 63 62 0 8 8 @ggggGggg point 0 nongenic -633 upstream M01F1.5.2 1410 CB6648_redo III 3517380 1 A G 157 3.88 63 62 0 8 8 @ggggGggg point 0 nongenic 2212 into M01F1.5.1 1411 CB6648_redo III 3540487 1 A T 227 1.00 63 62 3 14 17 @,.,tttTTTTTttTtTT point 0 nongenic -3033 upstream C54C6.6 1411 CB6648_redo III 3540487 1 A T 227 1.00 63 62 3 14 17 @,.,tttTTTTTttTtTT point 0 nongenic 1106 into C54C6.2 1412 CB6648_redo III 3540491 1 C A 255 1.00 63 62 3 16 19 @,.,aaaAAAAAaaAaAAAA point 0 SNP none haw42478 1413 CB6648_redo III 3599952 1 G T 85 1.00 63 62 3 7 10 @,,,tTTtTTT point 0 nongenic -18274 upstream C48D5.3 1413 CB6648_redo III 3599952 1 G T 85 1.00 63 62 3 7 10 @,,,tTTtTTT point 0 nongenic 4748 into C48D5.2c 1413 CB6648_redo III 3599952 1 G T 85 1.00 63 62 3 7 10 @,,,tTTtTTT point 0 nongenic 834 into C48D5.2b 1413 CB6648_redo III 3599952 1 G T 85 1.00 63 62 3 7 10 @,,,tTTtTTT point 0 nongenic 9235 into C48D5.2a 1414 CB6648_redo III 3599953 1 T C 148 1.00 63 62 2 7 9 @,,cCCcCCC point 0 nongenic -18275 upstream C48D5.3 1414 CB6648_redo III 3599953 1 T C 148 1.00 63 62 2 7 9 @,,cCCcCCC point 0 nongenic 4749 into C48D5.2c 1414 CB6648_redo III 3599953 1 T C 148 1.00 63 62 2 7 9 @,,cCCcCCC point 0 nongenic 835 into C48D5.2b 1414 CB6648_redo III 3599953 1 T C 148 1.00 63 62 2 7 9 @,,cCCcCCC point 0 nongenic 9236 into C48D5.2a 1415 CB6648_redo III 3606223 1 A T 255 1.00 63 62 0 28 28 @ttTtttttttTTtttTTtttTtTttttt point 0 nongenic -24545 upstream C48D5.3 1415 CB6648_redo III 3606223 1 A T 255 1.00 63 62 0 28 28 @ttTtttttttTTtttTTtttTtTttttt point 0 nongenic 5324 into C48D5.2b,C48D5.2c 1415 CB6648_redo III 3606223 1 A T 255 1.00 63 62 0 28 28 @ttTtttttttTTtttTTtttTtTttttt point 0 nongenic 5753 into C48D5.2a 1416 CB6648_redo III 3611202 1 C A 255 1.00 63 62 0 11 11 @aaaaaAAaaaA point 0 SNP none haw42583 1419 CB6648_redo III 3613833 1 G T 255 1.00 63 62 0 28 28 @TTTtTTTTtTttTTTTTTTtTTTtTTTt point 0 SNP none haw42588 1421 CB6648_redo III 3616756 1 C T 255 1.00 63 62 0 35 35 @TtTtTttttTttTTTtTttTtttttTTTTTtTTTT point 0 SNP none haw42597 1422 CB6648_redo III 3625872 1 T A 255 1.00 63 62 0 37 37 @AaaAAaAaaAAAAAAaaAAAAaAaaAAAAaaAAAaAa point 0 SNP none haw42613 4270 CB6648_redo III 3640946 0 X X -1000 -999.99 -1000 -1000 4 -3 1 @,...g indel 0 nongenic -10405 upstream C32A3.2 4270 CB6648_redo III 3640946 0 X X -1000 -999.99 -1000 -1000 4 -3 1 @,...g indel 0 nongenic -2381 downstream C32A3.3a.2,C32A3.3a.3,C32A3.3b 4270 CB6648_redo III 3640946 0 X X -1000 -999.99 -1000 -1000 4 -3 1 @,...g indel 0 nongenic -2700 downstream C32A3.3a.1 4270 CB6648_redo III 3640946 0 X X -1000 -999.99 -1000 -1000 4 -3 1 @,...g indel 0 nongenic -3408 upstream C46F11.1a 1423 CB6648_redo III 3641475 1 G T 255 1.00 63 62 0 29 29 @ttttTtttTttTTTtttttTtttTTttTT point 0 SNP none haw42649 1424 CB6648_redo III 3641888 1 G A 255 1.00 63 62 0 28 28 @AaaAaAaAAAAAAaaaaaAAAaaAAAaA point 0 SNP none haw42650 1425 CB6648_redo III 3645769 1 C A 255 1.00 63 62 0 22 22 @aaAaaaAAaaaaaaaAaAaAaa point 0 nongenic 1404 into C46F11.1b 1425 CB6648_redo III 3645769 1 C A 255 1.00 63 62 0 22 22 @aaAaaaAAaaaaaaaAaAaAaa point 0 nongenic 1416 into C46F11.1a 1426 CB6648_redo III 3645821 1 T G 255 1.00 63 62 0 32 32 @GGgGgGgGgGGGGggGgGGgggGggggGgGgG point 0 nongenic 1456 into C46F11.1b 1426 CB6648_redo III 3645821 1 T G 255 1.00 63 62 0 32 32 @GGgGgGgGgGGGGggGgGGgggGggggGgGgG point 0 nongenic 1468 into C46F11.1a 1427 CB6648_redo III 3666746 1 T A 35 1.81 63 52 2 5 7 @,AaAa,a point 0 nongenic -2272 upstream C46F11.4 1427 CB6648_redo III 3666746 1 T A 35 1.81 63 52 2 5 7 @,AaAa,a point 0 nongenic 583 downstream C46F11.6 1428 CB6648_redo III 3666765 1 T G 44 2.19 63 62 4 8 12 @GgGg,gGgG,,. point 0 nongenic -2291 upstream C46F11.4 1428 CB6648_redo III 3666765 1 T G 44 2.19 63 62 4 8 12 @GgGg,gGgG,,. point 0 nongenic 564 downstream C46F11.6 1429 CB6648_redo III 3666893 1 T A 144 1.00 63 62 0 6 6 @AaAAAA point 0 nongenic -2419 upstream C46F11.4 1429 CB6648_redo III 3666893 1 T A 144 1.00 63 62 0 6 6 @AaAAAA point 0 nongenic 436 downstream C46F11.6 1430 CB6648_redo III 3666894 1 G T 150 1.00 63 62 0 6 6 @TtTTTT point 0 nongenic -2420 upstream C46F11.4 1430 CB6648_redo III 3666894 1 G T 150 1.00 63 62 0 6 6 @TtTTTT point 0 nongenic 435 downstream C46F11.6 1431 CB6648_redo III 3681015 1 T G 16 1.00 63 62 1 3 4 @ggG, point 0 nongenic -10599 upstream C46F11.6 1432 CB6648_redo III 3805251 1 C G 114 1.00 63 62 2 6 8 @,,GGGggg point 0 nongenic -904 upstream T24A11.2 1432 CB6648_redo III 3805251 1 C G 114 1.00 63 62 2 6 8 @,,GGGggg point 0 nongenic 501 into T24A11.3 1433 CB6648_redo III 3867251 1 C A 6 1.00 63 62 3 4 7 @aaaA.,. point 0 nongenic -578 upstream F13B10.2a.1,F13B10.2d.1,F13B10.2d.2 1433 CB6648_redo III 3867251 1 C A 6 1.00 63 62 3 4 7 @aaaA.,. point 0 nongenic -580 upstream F13B10.2a.2,F13B10.2a.3,F13B10.2c.1,F13B10.2c.2 1433 CB6648_redo III 3867251 1 C A 6 1.00 63 62 3 4 7 @aaaA.,. point 0 nongenic 173 downstream C36A4.9a.1 1433 CB6648_redo III 3867251 1 C A 6 1.00 63 62 3 4 7 @aaaA.,. point 0 nongenic 441 downstream C36A4.9a.2,C36A4.9a.3,C36A4.9b 1439 CB6648_redo III 3995385 1 G A 248 1.00 63 62 0 9 9 @aaAAAAAaa point 0 SNP none haw42814 1442 CB6648_redo III 3995403 1 G T 218 1.00 63 62 0 7 7 @TTTttTT point 0 nongenic -3250 upstream C36E8.2 4280 CB6648_redo III 4019157 0 X X -1000 -999.99 -1000 -1000 2 -1 1 @,,ggGg indel 0 nongenic -1537 upstream C36E8.5.1 4280 CB6648_redo III 4019157 0 X X -1000 -999.99 -1000 -1000 2 -1 1 @,,ggGg indel 0 nongenic -881 upstream T02C12.2 1443 CB6648_redo III 4056056 1 A T 163 1.00 63 62 0 11 11 @tTttTTttttt point 0 nongenic -19242 upstream T02C12.1 1443 CB6648_redo III 4056056 1 A T 163 1.00 63 62 0 11 11 @tTttTTttttt point 0 nongenic 1893 into E03A3.2 1444 CB6648_redo III 4056057 1 T A 155 1.00 63 62 0 10 10 @AaaAAaaaaa point 0 nongenic -19243 upstream T02C12.1 1444 CB6648_redo III 4056057 1 T A 155 1.00 63 62 0 10 10 @AaaAAaaaaa point 0 nongenic 1892 into E03A3.2 1445 CB6648_redo III 4056058 1 A C 171 1.00 63 62 0 7 7 @CCccccc point 0 nongenic -19244 upstream T02C12.1 1445 CB6648_redo III 4056058 1 A C 171 1.00 63 62 0 7 7 @CCccccc point 0 nongenic 1891 into E03A3.2 4282 CB6648_redo III 4059721 0 X X -1000 -999.99 -1000 -1000 2 2 4 @,.cCc indel 0 inframe none E03A3.4 1446 CB6648_redo III 4112942 1 G C 255 1.00 63 62 0 37 37 @CcCcccCCCCCCcCCCccCCCcCCCcCcCCCCccccc point 0 SNP none haw42904 1447 CB6648_redo III 4209221 1 C A 255 1.00 63 62 0 10 10 @AAaaAAaAAA point 0 nongenic -1312 upstream F43C1.1 1447 CB6648_redo III 4209221 1 C A 255 1.00 63 62 0 10 10 @AAaaAAaAAA point 0 nongenic 983 downstream R74.8a 1448 CB6648_redo III 4209222 1 A C 255 1.00 63 62 0 10 10 @CCccCCcCCC point 0 nongenic -1311 upstream F43C1.1 1448 CB6648_redo III 4209222 1 A C 255 1.00 63 62 0 10 10 @CCccCCcCCC point 0 nongenic 984 downstream R74.8a 1449 CB6648_redo III 4209243 1 C A 255 1.00 63 62 0 18 18 @AAAaAAAaAaAAAaAAAA point 0 nongenic -1290 upstream F43C1.1 1450 CB6648_redo III 4209244 1 G C 255 1.00 63 62 0 20 20 @CCCcCCCcCcCCCcCCCCCC point 0 nongenic -1289 upstream F43C1.1 1451 CB6648_redo III 4286569 1 C T 255 1.00 63 62 0 36 36 @tTtTtttTtTTTtTTtttTtTTTTTttTTtTTttTt point 0 SNP none haw42951 1454 CB6648_redo III 4440341 1 G A 255 1.00 63 62 1 45 46 @aaAAAAAAAaaaaAAaAaaaaaaA,AAAAAaaaaaaaAAaaaAaAA point 0 SNP none haw42977,snp_C28A5[2] 1455 CB6648_redo III 4440871 1 T A 255 1.00 63 62 1 36 37 @A.AaaaAaAAAAAaaaAAaAAAAAaAAaAAAaaAAaA point 0 SNP none haw42978 1456 CB6648_redo III 4445016 1 C G 3 1.00 63 2 2 4 6 @gGGG.. point 0 nongenic 882 downstream C28A5.3 1461 CB6648_redo III 4605000 1 T A 6 1.00 63 62 3 4 7 @,..Aaaa point 0 nongenic -11613 upstream F10F2.3 1461 CB6648_redo III 4605000 1 T A 6 1.00 63 62 3 4 7 @,..Aaaa point 0 nongenic 7302 into F10F2.1 1462 CB6648_redo III 4628542 1 T G 4 1.81 63 44 1 5 6 @.Ggggg point 0 missense CAT->CAG[His->Gln] F10F2.7 1463 CB6648_redo III 4640495 1 A G 9 1.00 63 62 2 3 5 @..ggg point 0 missense AAT->AGT[Asn->Ser] F10F2.5 1465 CB6648_redo III 4689555 1 T C 9 1.00 63 62 2 4 6 @.,CcCc point 0 nongenic -2395 upstream T04A8.4 1465 CB6648_redo III 4689555 1 T C 9 1.00 63 62 2 4 6 @.,CcCc point 0 nongenic 287 into T04A8.5 4295 CB6648_redo III 4708950 2 X X -1000 -999.99 -1000 -1000 8 -5 3 @,,..,,,. indel -2 SNP none uCE3-874 1466 CB6648_redo III 4712952 1 C G 255 1.00 63 62 0 28 28 @GgGggGGggGggGGgGgggGgggggGgG point 0 missense TGG->TGC[Trp->Cys] T04A8.15 1466 CB6648_redo III 4712952 1 C G 255 1.00 63 62 0 28 28 @GgGggGGggGggGGgGgggGgggggGgG point 0 SNP none haw43017,uCE3-875 1467 CB6648_redo III 4750685 1 A T 87 2.06 63 62 15 20 35 @T...TT..,.t,t.t.tttt..TTTTT.Ttt,tt. point 0 nongenic 435 downstream VB0393L.2 1468 CB6648_redo III 4761634 1 G A 255 1.00 63 62 0 57 57 @AaAaaAaaAAAaAaaAAAaAaaAaAaAaAaAAAaAaaaAAAaaAaAaaaaaAaaAaa point 0 SNP none haw43024 1469 CB6648_redo III 4845216 1 A T 255 1.00 63 62 0 36 36 @TTTTttttttttTtttttttTTtTTtTTtTTTTTTT point 0 missense AAT->ATT[Asn->Ile] F26A1.2 1469 CB6648_redo III 4845216 1 A T 255 1.00 63 62 0 36 36 @TTTTttttttttTtttttttTTtTTtTTtTTTTTTT point 0 SNP none haw43039 1470 CB6648_redo III 4947904 1 T C 3 1.00 63 62 2 2 4 @Cc,, point 0 nongenic -4179 upstream C26E6.2 1470 CB6648_redo III 4947904 1 T C 3 1.00 63 62 2 2 4 @Cc,, point 0 nongenic 636 downstream C26E6.3 1471 CB6648_redo III 4962073 1 T A 75 1.00 63 62 1 5 6 @aaaaa. point 0 nongenic -3548 upstream C27F2.2a 1471 CB6648_redo III 4962073 1 T A 75 1.00 63 62 1 5 6 @aaaaa. point 0 nongenic -397 upstream C27F2.5.2 1471 CB6648_redo III 4962073 1 T A 75 1.00 63 62 1 5 6 @aaaaa. point 0 nongenic 298 into C27F2.9 1471 CB6648_redo III 4962073 1 T A 75 1.00 63 62 1 5 6 @aaaaa. point 0 nongenic 929 into C27F2.5.1 1474 CB6648_redo III 5030205 1 G T 8 1.00 63 62 2 3 5 @,.TtT point 0 nongenic -686 upstream R144.1 1474 CB6648_redo III 5030205 1 G T 8 1.00 63 62 2 3 5 @,.TtT point 0 nongenic 607 downstream R144.2a 1475 CB6648_redo III 5032432 1 C G 27 1.00 63 0 3 5 8 @ggGgG.,. point 0 nongenic -4200 upstream C45G9.6b 1475 CB6648_redo III 5032432 1 C G 27 1.00 63 0 3 5 8 @ggGgG.,. point 0 nongenic 1541 into R144.1 4302 CB6648_redo III 5066884 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @,...gggggg indel 0 nongenic -1802 downstream C45G9.11 4302 CB6648_redo III 5066884 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @,...gggggg indel 0 nongenic -2145 upstream C45G9.2 1478 CB6648_redo III 5105940 1 C G 23 1.00 63 2 2 5 7 @GGgGG.. point 0 missense GCG->GGG[Ala->Gly] F54D8.6 1479 CB6648_redo III 5333258 1 T G 29 1.00 63 28 1 4 5 @,Gggg point 0 missense TGC->GGC[Cys->Gly] F52C9.1a 1480 CB6648_redo III 5333259 1 G C 29 1.00 63 28 1 4 5 @,Cccc point 0 missense TGC->TCC[Cys->Ser] F52C9.1a 4306 CB6648_redo III 5471937 0 X X -1000 -999.99 -1000 -1000 9 -6 3 @,..,....,cc indel 0 nongenic -2498 upstream F48E8.1a,F48E8.1b,F48E8.1c 4308 CB6648_redo III 5577371 0 X X -1000 -999.99 -1000 -1000 2 2 4 @,,gg indel 0 nongenic 731 downstream F09F7.1 1494 CB6648_redo III 5595879 1 T G 175 1.00 63 62 0 5 5 @GggGg point 0 nongenic 155 into F56D2.7 1494 CB6648_redo III 5595879 1 T G 175 1.00 63 62 0 5 5 @GggGg point 0 splice_donor none F56D2.7 4314 CB6648_redo III 5695323 1 X X -1000 -999.99 -1000 -1000 6 -3 3 @,,.,.. indel -1 SNP none uCE3-925 1496 CB6648_redo III 5699104 1 G A 108 1.00 63 12 1 4 5 @aAAa, point 0 nongenic -1144 upstream B0336.8 1496 CB6648_redo III 5699104 1 G A 108 1.00 63 12 1 4 5 @aAAa, point 0 nongenic 586 into B0336.4a 1496 CB6648_redo III 5699104 1 G A 108 1.00 63 12 1 4 5 @aAAa, point 0 nongenic 720 into B0336.4b 4316 CB6648_redo III 5706403 4 X X -1000 -999.99 -1000 -1000 12 -2 10 @..,.,..,..,, indel -4 SNP none uCE3-927 1500 CB6648_redo III 5765139 1 C T 6 1.00 63 2 3 3 6 @...TTT point 0 nongenic -2692 upstream B0244.11 1500 CB6648_redo III 5765139 1 C T 6 1.00 63 2 3 3 6 @...TTT point 0 nongenic 626 into B0244.2 1501 CB6648_redo III 5814252 1 T C 255 1.00 63 62 0 36 36 @CCCccccCcCCCcCCccCcCccccCccCccccCCcC point 0 SNP none haw43460 4319 CB6648_redo III 5814707 0 X X -1000 -999.99 -1000 -1000 11 -10 1 @........... indel 3 nongenic -289 upstream R12B2.7 1505 CB6648_redo III 5889988 1 T A 50 1.00 63 62 3 5 8 @AAaaa.,. point 0 nongenic -1262 upstream C28H8.8 1505 CB6648_redo III 5889988 1 T A 50 1.00 63 62 3 5 8 @AAaaa.,. point 0 nongenic 320 into C28H8.6b 1505 CB6648_redo III 5889988 1 T A 50 1.00 63 62 3 5 8 @AAaaa.,. point 0 nongenic 360 downstream C28H8.6a,C28H8.6c 1506 CB6648_redo III 5937104 1 T C 37 1.00 63 62 3 5 8 @,,.Ccccc point 0 nongenic -3087 upstream F25B5.4a.2 1506 CB6648_redo III 5937104 1 T C 37 1.00 63 62 3 5 8 @,,.Ccccc point 0 nongenic -35 upstream EGAP1.1 1507 CB6648_redo III 5938647 1 T C 18 1.00 63 62 3 4 7 @.,.ccCC point 0 nongenic -1544 upstream F25B5.4a.2 1507 CB6648_redo III 5938647 1 T C 18 1.00 63 62 3 4 7 @.,.ccCC point 0 nongenic -1578 upstream EGAP1.1 1508 CB6648_redo III 5953899 1 A G 187 1.00 63 62 0 6 6 @ggGGGg point 0 missense TCT->CCT[Ser->Pro] F25B5.7a,F25B5.7c 1509 CB6648_redo III 5953900 1 T A 171 1.00 63 62 0 7 7 @aaAAAaA point 0 missense AAA->AAT[Lys->Asn] F25B5.7a,F25B5.7c 1510 CB6648_redo III 5953904 1 G T 146 1.00 63 62 0 6 6 @TTTtTt point 0 missense CCA->CAA[Pro->Gln] F25B5.7a,F25B5.7c 1511 CB6648_redo III 5962999 1 C T 255 1.00 63 62 0 29 29 @TtTtTTTttTttTTttTtTTTtTTtttTt point 0 SNP none haw43492 1512 CB6648_redo III 6033358 1 A T 11 1.00 63 62 0 7 7 @TTtGgGG point 0 missense TCC->ACC[Ser->Thr] ZK328.7a 1516 CB6648_redo III 6229465 1 C T 255 1.00 63 62 0 31 31 @TTtTTttTTTtttttTTtTTtTTtTtTttTt point 0 SNP none haw43535 1517 CB6648_redo III 6231877 1 C T 255 1.00 63 62 0 49 49 @TTttTTttTTTTtTttTtttTTttttttttttttTTTTttTTTTttTtT point 0 SNP none haw43536 4331 CB6648_redo III 6280051 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @,,.,,,cC indel 0 nongenic -1750 upstream C18F10.7a.1 4331 CB6648_redo III 6280051 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @,,.,,,cC indel 0 nongenic -276 upstream F47D12.4a.1,F47D12.4a.2 4331 CB6648_redo III 6280051 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @,,.,,,cC indel 0 nongenic -324 upstream F47D12.4a.3 1518 CB6648_redo III 6283135 1 A T 91 1.00 63 20 0 5 5 @ttttt point 0 nongenic 748 into F47D12.5.1,F47D12.5.2 1518 CB6648_redo III 6283135 1 A T 91 1.00 63 20 0 5 5 @ttttt point 0 nongenic 774 downstream F47D12.4a.1,F47D12.4a.2,F47D12.4b,F47D12.4c 1518 CB6648_redo III 6283135 1 A T 91 1.00 63 20 0 5 5 @ttttt point 0 nongenic 776 downstream F47D12.4a.3 1522 CB6648_redo III 6283155 1 C A 109 1.00 63 10 0 4 4 @AAAA point 0 nongenic 768 into F47D12.5.1,F47D12.5.2 1522 CB6648_redo III 6283155 1 C A 109 1.00 63 10 0 4 4 @AAAA point 0 nongenic 794 downstream F47D12.4a.1,F47D12.4a.2,F47D12.4b,F47D12.4c 1522 CB6648_redo III 6283155 1 C A 109 1.00 63 10 0 4 4 @AAAA point 0 nongenic 796 downstream F47D12.4a.3 1523 CB6648_redo III 6300175 1 G A 136 1.00 63 62 1 5 6 @aAAAa, point 0 nongenic -9145 upstream F47D12.1a,F47D12.1b,F47D12.1c,F47D12.1d 1523 CB6648_redo III 6300175 1 G A 136 1.00 63 62 1 5 6 @aAAAa, point 0 nongenic 435 into F47D12.9a.1,F47D12.9a.2,F47D12.9b.4 1523 CB6648_redo III 6300175 1 G A 136 1.00 63 62 1 5 6 @aAAAa, point 0 nongenic 648 into F47D12.9b.3 1523 CB6648_redo III 6300175 1 G A 136 1.00 63 62 1 5 6 @aAAAa, point 0 nongenic 890 into F47D12.9b.1,F47D12.9b.2 1523 CB6648_redo III 6300175 1 G A 136 1.00 63 62 1 5 6 @aAAAa, point 0 nongenic 906 downstream F47D12.3 1524 CB6648_redo III 6301650 1 A T 11 1.62 63 56 2 3 5 @..ttt point 0 nongenic -154 upstream F47D12.9b.2 1524 CB6648_redo III 6301650 1 A T 11 1.62 63 56 2 3 5 @..ttt point 0 nongenic -155 upstream F47D12.9b.4 1524 CB6648_redo III 6301650 1 A T 11 1.62 63 56 2 3 5 @..ttt point 0 nongenic -7670 upstream F47D12.1a,F47D12.1b,F47D12.1c,F47D12.1d 1524 CB6648_redo III 6301650 1 A T 11 1.62 63 56 2 3 5 @..ttt point 0 nongenic 1513 into F47D12.9a.1 1524 CB6648_redo III 6301650 1 A T 11 1.62 63 56 2 3 5 @..ttt point 0 nongenic 803 into F47D12.9a.2,F47D12.9b.1,F47D12.9b.3 1525 CB6648_redo III 6301652 1 T C 57 1.81 63 10 1 4 5 @.cccc point 0 nongenic -156 upstream F47D12.9b.2 1525 CB6648_redo III 6301652 1 T C 57 1.81 63 10 1 4 5 @.cccc point 0 nongenic -157 upstream F47D12.9b.4 1525 CB6648_redo III 6301652 1 T C 57 1.81 63 10 1 4 5 @.cccc point 0 nongenic -7668 upstream F47D12.1a,F47D12.1b,F47D12.1c,F47D12.1d 1525 CB6648_redo III 6301652 1 T C 57 1.81 63 10 1 4 5 @.cccc point 0 nongenic 1511 into F47D12.9a.1 1525 CB6648_redo III 6301652 1 T C 57 1.81 63 10 1 4 5 @.cccc point 0 nongenic 801 into F47D12.9a.2,F47D12.9b.1,F47D12.9b.3 4333 CB6648_redo III 6304028 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @,.,,.CC indel 0 nongenic -5293 upstream F47D12.1a,F47D12.1b,F47D12.1c,F47D12.1d 4333 CB6648_redo III 6304028 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @,.,,.CC indel 0 nongenic -865 upstream F47D12.9a.1 1526 CB6648_redo III 6304029 1 T C 72 1.00 63 62 3 5 8 @CcCCc,,, point 0 nongenic -5291 upstream F47D12.1a,F47D12.1b,F47D12.1c,F47D12.1d 1526 CB6648_redo III 6304029 1 T C 72 1.00 63 62 3 5 8 @CcCCc,,, point 0 nongenic -866 upstream F47D12.9a.1 1527 CB6648_redo III 6322256 1 C A 19 1.00 63 62 3 5 8 @AaAaa,,. point 0 missense GGG->TGG[Gly->Trp] C56G2.5 1528 CB6648_redo III 6337503 1 C T 13 1.81 0 12 0 5 5 @TTTTT point 0 nongenic 948 downstream C56G2.7 1528 CB6648_redo III 6337503 1 C T 13 1.81 0 12 0 5 5 @TTTTT point 0 nongenic 951 downstream C56G2.6.1,C56G2.6.2 1529 CB6648_redo III 6371224 1 A G 255 1.00 63 62 0 49 49 @GgGGGgggGGGGgGggGgGgGgGGGgggggGGGgGgGGGGGGGGGGGGg point 0 missense GAT->GGT[Asp->Gly] C16A3.8 1529 CB6648_redo III 6371224 1 A G 255 1.00 63 62 0 49 49 @GgGGGgggGGGGgGggGgGgGgGGGgggggGGGgGgGGGGGGGGGGGGg point 0 SNP none haw43559 1530 CB6648_redo III 6387539 1 G A 194 1.00 63 62 9 28 37 @aA,aaaAA.AAAAA,.AaaaaA,a..A,AA.aAAAAA point 0 silent AAG->AAA[Lys->Lys] C16A3.3 1531 CB6648_redo III 6428922 1 G A 149 1.00 63 62 1 7 8 @aaaaaAa. point 0 SNP none haw43564 1533 CB6648_redo III 6619216 1 C T 255 1.00 63 62 0 46 46 @TTTTTtTttTtTTTTTTTttTTtTTtTTTTTTttttTtttTTtTTT point 0 missense CTC->TTC[Leu->Phe] Y40D12A.1a 1533 CB6648_redo III 6619216 1 C T 255 1.00 63 62 0 46 46 @TTTTTtTttTtTTTTTTTttTTtTTtTTTTTTttttTtttTTtTTT point 0 SNP none haw43601 1534 CB6648_redo III 6626308 1 G C 76 5.44 63 60 0 7 7 @CCcCCCC point 0 nongenic -1396 upstream C13B9.3 1534 CB6648_redo III 6626308 1 G C 76 5.44 63 60 0 7 7 @CCcCCCC point 0 nongenic -2636 upstream C13B9.1.1,C13B9.1.2 1535 CB6648_redo III 6626309 1 C A 66 8.50 63 60 0 4 4 @AAAA point 0 nongenic -1397 upstream C13B9.3 1535 CB6648_redo III 6626309 1 C A 66 8.50 63 60 0 4 4 @AAAA point 0 nongenic -2635 upstream C13B9.1.1,C13B9.1.2 1536 CB6648_redo III 6626310 1 A C 61 4.88 63 62 4 5 9 @,,,,CCCCc point 0 nongenic -1398 upstream C13B9.3 1536 CB6648_redo III 6626310 1 A C 61 4.88 63 62 4 5 9 @,,,,CCCCc point 0 nongenic -2634 upstream C13B9.1.1,C13B9.1.2 1537 CB6648_redo III 6626314 1 C A 178 2.00 63 62 0 15 15 @AAAAaAAaaaaaaAa point 0 nongenic -1402 upstream C13B9.3 1537 CB6648_redo III 6626314 1 C A 178 2.00 63 62 0 15 15 @AAAAaAAaaaaaaAa point 0 nongenic -2630 upstream C13B9.1.1,C13B9.1.2 1538 CB6648_redo III 6626315 1 G C 178 2.00 63 62 0 15 15 @CCCCcCCccccccCc point 0 nongenic -1403 upstream C13B9.3 1538 CB6648_redo III 6626315 1 G C 178 2.00 63 62 0 15 15 @CCCCcCCccccccCc point 0 nongenic -2629 upstream C13B9.1.1,C13B9.1.2 1540 CB6648_redo III 6688069 1 A T 165 1.00 63 62 0 6 6 @tttttt point 0 SNP none haw43620 1541 CB6648_redo III 6710989 1 A C 4 1.00 63 62 5 5 10 @cCccC..... point 0 nongenic -891 upstream F37A4.5 1541 CB6648_redo III 6710989 1 A C 4 1.00 63 62 5 5 10 @cCccC..... point 0 nongenic -994 upstream F37A4.8 1542 CB6648_redo III 6757601 1 G C 29 1.00 63 62 2 3 5 @..ccc point 0 nongenic -37973 upstream R05H11.1 1542 CB6648_redo III 6757601 1 G C 29 1.00 63 62 2 3 5 @..ccc point 0 nongenic 11355 into K07E12.1a.2 1542 CB6648_redo III 6757601 1 G C 29 1.00 63 62 2 3 5 @..ccc point 0 nongenic 11357 into K07E12.1a.1 1542 CB6648_redo III 6757601 1 G C 29 1.00 63 62 2 3 5 @..ccc point 0 nongenic 8527 into K07E12.1b 1543 CB6648_redo III 6923579 1 G A 255 1.00 63 62 0 25 25 @AAAAAAAAAAAAAAAAAAAAAAaAA point 0 SNP none haw43734 4343 CB6648_redo III 6925969 0 X X -1000 -999.99 -1000 -1000 2 1 3 @,,tTtt indel 0 nongenic -13551 upstream T07E3.6a,T07E3.6b.1,T07E3.6b.2 4343 CB6648_redo III 6925969 0 X X -1000 -999.99 -1000 -1000 2 1 3 @,,tTtt indel 0 nongenic -1656 downstream F57B9.7b 4343 CB6648_redo III 6925969 0 X X -1000 -999.99 -1000 -1000 2 1 3 @,,tTtt indel 0 nongenic -1930 downstream F57B9.7a 4343 CB6648_redo III 6925969 0 X X -1000 -999.99 -1000 -1000 2 1 3 @,,tTtt indel 0 nongenic -4005 upstream F57B9.6a.1 1559 CB6648_redo III 7013025 1 G C 49 1.00 63 42 1 4 5 @cCcC. point 0 nongenic -7727 upstream C06E8.5 1559 CB6648_redo III 7013025 1 G C 49 1.00 63 42 1 4 5 @cCcC. point 0 nongenic 3946 into F11H8.2 1560 CB6648_redo III 7013026 1 C A 43 1.00 63 48 1 3 4 @AaA. point 0 nongenic -7728 upstream C06E8.5 1560 CB6648_redo III 7013026 1 C A 43 1.00 63 48 1 3 4 @AaA. point 0 nongenic 3947 into F11H8.2 1561 CB6648_redo III 7013479 1 G A 255 1.00 63 62 0 54 54 @aaAaAaaAAAAAaAAaaaaAAAAaaAAAaaAaaAAaaaaaaaaaAaaAaAaAaA point 0 nongenic -8181 upstream C06E8.5 1561 CB6648_redo III 7013479 1 G A 255 1.00 63 62 0 54 54 @aaAaAaaAAAAAaAAaaaaAAAAaaAAAaaAaaAAaaaaaaaaaAaaAaAaAaA point 0 nongenic 4400 into F11H8.2 1562 CB6648_redo III 7021096 1 T G 58 1.00 63 62 3 6 9 @GgGGGg,,, point 0 nongenic -3 upstream F11H8.1.1 1562 CB6648_redo III 7021096 1 T G 58 1.00 63 62 3 6 9 @GgGGGg,,, point 0 nongenic -561 upstream F11H8.3 1562 CB6648_redo III 7021096 1 T G 58 1.00 63 62 3 6 9 @GgGGGg,,, point 0 nongenic -721 upstream F11H8.1.2 1563 CB6648_redo III 7028423 1 T A 255 1.00 63 62 0 38 38 @AAAaaaAAAAaaAAAaAAaaAaaAAaaAAAAAAAaaaa point 0 missense ACA->TCA[Thr->Ser] F11H8.4a,F11H8.4b 1563 CB6648_redo III 7028423 1 T A 255 1.00 63 62 0 38 38 @AAAaaaAAAAaaAAAaAAaaAaaAAaaAAAAAAAaaaa point 0 SNP none haw43822 1564 CB6648_redo III 7028541 1 G A 135 1.00 63 0 0 6 6 @aaaaaa point 0 nongenic 589 into F11H8.4a,F11H8.4b 1565 CB6648_redo III 7028623 1 A T 255 1.00 63 62 0 46 46 @ttttTTTTtTtTTTTTTtTTTTttTTTtttTTTtTtTTTtttTtTT point 0 SNP none haw43823 1566 CB6648_redo III 7028658 1 C T 255 1.00 63 62 0 35 35 @TtTTTtttTtTTtTTTTTTTtTTTTTTtTTtttTT point 0 missense GAA->AAA[Glu->Lys] F11H8.4a,F11H8.4b 1566 CB6648_redo III 7028658 1 C T 255 1.00 63 62 0 35 35 @TtTTTtttTtTTtTTTTTTTtTTTTTTtTTtttTT point 0 SNP none haw43824 1568 CB6648_redo III 7033325 1 T G 255 1.00 63 62 0 37 37 @ggGGgGGggGGGGGgGGggGGGGGggggGgggGGgGg point 0 nongenic -4195 upstream F11H8.4a,F11H8.4b 1573 CB6648_redo III 7075888 1 C G 53 1.00 63 54 3 3 6 @.,,gGg point 0 silent CCG->CCC[Pro->Pro] ZK418.6 1574 CB6648_redo III 7075890 1 G C 65 1.00 63 52 2 4 6 @,,cCcc point 0 missense CCG->GCG[Pro->Ala] ZK418.6 4354 CB6648_redo III 7079762 0 X X -1000 -999.99 -1000 -1000 2 1 3 @,.CcC indel 0 nongenic -756 downstream ZK418.7 4354 CB6648_redo III 7079762 0 X X -1000 -999.99 -1000 -1000 2 1 3 @,.CcC indel 0 nongenic -997 upstream ZK418.6 1575 CB6648_redo III 7118005 1 G A 255 1.00 63 62 0 41 41 @AAAaAAAAAAAAAAaAAAAAAaaAaAAAaaAaaaAAaaaAA point 0 SNP none haw43886 1576 CB6648_redo III 7214104 1 A C 255 1.00 63 62 0 44 44 @CCCcCCCCCCCcccCCcCcCCCCccCcCCccCCcCcCCCccCCC point 0 missense AGC->CGC[Ser->Arg] R151.2a,R151.2b.1,R151.2b.2,R151.2b.3,R151.2b.4,R151.2b.5,R151.2c,R151.2d.1,R151.2d.2 1577 CB6648_redo III 7236646 1 T G 15 2.50 63 8 0 4 4 @gggg point 0 nongenic -2308 upstream T20H4.3a,T20H4.3b 1577 CB6648_redo III 7236646 1 T G 15 2.50 63 8 0 4 4 @gggg point 0 nongenic -2515 upstream T20H4.5 1578 CB6648_redo III 7236653 1 G C 91 2.31 63 62 0 7 7 @ccccCCC point 0 nongenic -2301 upstream T20H4.3a,T20H4.3b 1578 CB6648_redo III 7236653 1 G C 91 2.31 63 62 0 7 7 @ccccCCC point 0 nongenic -2522 upstream T20H4.5 1579 CB6648_redo III 7236655 1 A G 136 2.31 63 62 0 7 7 @ggggGGG point 0 nongenic -2299 upstream T20H4.3a,T20H4.3b 1579 CB6648_redo III 7236655 1 A G 136 2.31 63 62 0 7 7 @ggggGGG point 0 nongenic -2524 upstream T20H4.5 1580 CB6648_redo III 7236657 1 C A 189 2.25 63 62 0 8 8 @aaaaAAAA point 0 nongenic -2297 upstream T20H4.3a,T20H4.3b 1580 CB6648_redo III 7236657 1 C A 189 2.25 63 62 0 8 8 @aaaaAAAA point 0 nongenic -2526 upstream T20H4.5 1583 CB6648_redo III 7363303 1 T G 4 2.00 0 16 23 31 54 @..,g..gGg...Gg.AggG,....g.GG,,GG,gggGGG,.ggg..G.GGGGGg point 0 missense TAC->TCC[Tyr->Ser] F08F8.5 1584 CB6648_redo III 7363343 1 A G 10 2.00 63 32 18 38 56 @,.ggg..G.GGGGGgg,.ggGGG,gg,Gg.GgGGG.,G..g..gGgggg.gGgGg. point 0 missense TTT->CTT[Phe->Leu] F08F8.5 1609 CB6648_redo III 7453148 1 C G 8 5.75 10 2 1 13 14 @GGGGGGGGGGGGG, point 0 nongenic -787 upstream Y69F12A.2a.1 1609 CB6648_redo III 7453148 1 C G 8 5.75 10 2 1 13 14 @GGGGGGGGGGGGG, point 0 nongenic -856 upstream Y69F12A.2a.2,Y69F12A.2b 1610 CB6648_redo III 7453152 1 G T 8 6.31 10 2 1 13 14 @TTTTTTCTTTTT,a point 0 nongenic -783 upstream Y69F12A.2a.1 1610 CB6648_redo III 7453152 1 G T 8 6.31 10 2 1 13 14 @TTTTTTCTTTTT,a point 0 nongenic -852 upstream Y69F12A.2a.2,Y69F12A.2b 1612 CB6648_redo III 7528175 1 C T 55 1.00 63 62 1 4 5 @,Tttt point 0 SNP none haw44215 1613 CB6648_redo III 7587271 1 G T 67 1.00 63 62 1 5 6 @.TTtTT point 0 nongenic -4369 upstream R13A5.10 1613 CB6648_redo III 7587271 1 G T 67 1.00 63 62 1 5 6 @.TTtTT point 0 nongenic 2661 into R13A5.1a.2,R13A5.1b,R13A5.1d 1613 CB6648_redo III 7587271 1 G T 67 1.00 63 62 1 5 6 @.TTtTT point 0 nongenic 3011 into R13A5.1a.1 1613 CB6648_redo III 7587271 1 G T 67 1.00 63 62 1 5 6 @.TTtTT point 0 nongenic 3144 into R13A5.1c 4362 CB6648_redo III 7587556 0 X X -1000 -999.99 -1000 -1000 3 0 3 @...TT indel 0 nongenic -2945 downstream R13A5.1a.2,R13A5.1b,R13A5.1d 4362 CB6648_redo III 7587556 0 X X -1000 -999.99 -1000 -1000 3 0 3 @...TT indel 0 nongenic -3295 downstream R13A5.1a.1 4362 CB6648_redo III 7587556 0 X X -1000 -999.99 -1000 -1000 3 0 3 @...TT indel 0 nongenic -3428 downstream R13A5.1c 4362 CB6648_redo III 7587556 0 X X -1000 -999.99 -1000 -1000 3 0 3 @...TT indel 0 nongenic -4654 upstream R13A5.10 1614 CB6648_redo III 7587557 1 G T 7 1.00 63 28 2 3 5 @ttt,, point 0 nongenic -4655 upstream R13A5.10 1614 CB6648_redo III 7587557 1 G T 7 1.00 63 28 2 3 5 @ttt,, point 0 nongenic 2947 into R13A5.1a.2,R13A5.1b,R13A5.1d 1614 CB6648_redo III 7587557 1 G T 7 1.00 63 28 2 3 5 @ttt,, point 0 nongenic 3297 into R13A5.1a.1 1614 CB6648_redo III 7587557 1 G T 7 1.00 63 28 2 3 5 @ttt,, point 0 nongenic 3430 into R13A5.1c 1616 CB6648_redo III 7588318 1 A G 255 1.00 63 62 0 35 35 @gGGGgGggggGggggggGggggGGgGGgggggggg point 0 SNP none haw44283 1618 CB6648_redo III 7608528 1 T C 14 1.00 63 62 3 4 7 @CCCC.,, point 0 missense AAG->AGG[Lys->Arg] T04A6.3 1619 CB6648_redo III 7643354 1 T A 255 1.00 63 62 0 31 31 @AaaAAAaaaaaaAaaaaAAAAaAaaAAAAaa point 0 SNP none haw44321 1623 CB6648_redo III 7708718 1 G T 255 6.06 63 62 0 33 33 @TtTTTTtTTTtTTTtTTTTTtttTTTTtTtttT point 0 nongenic -3660 upstream C03B8.3 1623 CB6648_redo III 7708718 1 G T 255 6.06 63 62 0 33 33 @TtTTTTtTTTtTTTtTTTTTtttTTTTtTtttT point 0 nongenic 682 into C03B8.4 4367 CB6648_redo III 7712933 1 X X -1000 -999.99 -1000 -1000 4 -1 3 @.,.. indel -1 SNP none uCE3-1027 1629 CB6648_redo III 7874571 1 C A 115 1.00 63 62 2 9 11 @AaaaaAAAA,, point 0 nongenic 865 into C02C2.1 1630 CB6648_redo III 7882068 1 C T 45 1.00 63 62 4 4 8 @.,,,Tttt point 0 nongenic -3301 upstream C02C2.5 1630 CB6648_redo III 7882068 1 C T 45 1.00 63 62 4 4 8 @.,,,Tttt point 0 nongenic 969 into ZK688.9 1631 CB6648_redo III 7882069 1 G C 83 1.00 63 44 2 6 8 @,,CCcccc point 0 nongenic -3302 upstream C02C2.5 1631 CB6648_redo III 7882069 1 G C 83 1.00 63 44 2 6 8 @,,CCcccc point 0 nongenic 970 into ZK688.9 1632 CB6648_redo III 7924181 1 C T 255 1.00 63 62 0 38 38 @TTtTTtTTtttttTTTTTttTTTttTttTTtttTTTtt point 0 SNP none haw44542 1633 CB6648_redo III 7958663 1 C T 255 1.00 63 62 0 43 43 @TTttTtttTTTTTtttTTTTtTtTtTtttTtTtTtTTTttTTT point 0 SNP none haw44573 1636 CB6648_redo III 8064604 1 C T 255 1.00 63 62 0 47 47 @TtTtTtTtTtttTTtTTttttTtttTtTTTTtttTtttTTTtttTtT point 0 SNP none haw44619,snp_K12H4[1] 4372 CB6648_redo III 8068401 0 X X -1000 -999.99 -1000 -1000 2 0 2 @..GGgg indel 0 inframe none K12H4.1 1637 CB6648_redo III 8124694 1 G A 255 1.00 63 62 0 51 51 @aAAaaAAaAaAAaaAaAaaaaAaAAAaaAaaaAaAAaAAaAAaaAaaaAaa point 0 SNP none haw44646 1638 CB6648_redo III 8130396 1 G A 255 1.00 63 62 0 49 49 @aAAAAAaaAAaAaAaaAaaAaAaaaAAaaaaaaAaaaaaaaAAaaAaaa point 0 SNP none haw44651 1640 CB6648_redo III 8154517 1 T A 255 1.00 63 62 0 49 49 @aAaaaaAaAAaaAAAaAaaaaaaaaAaAaAAAAAaaAaAaaAAAaaAaa point 0 SNP none haw44660 1645 CB6648_redo III 8336690 1 A G 3 4.75 0 2 11 14 25 @,G,,.TG,.,,,gg.ggg,gggggg point 0 nongenic -2538 upstream ZC262.4 1645 CB6648_redo III 8336690 1 A G 3 4.75 0 2 11 14 25 @,G,,.TG,.,,,gg.ggg,gggggg point 0 nongenic 731 downstream ZC262.9 1646 CB6648_redo III 8424571 1 T C 255 9.38 63 62 0 52 52 @cccCCcCCcCCCcccCCcCCccCCccccccCCcCCCccCcCccCccccCccc point 0 nongenic -1683 upstream ZK1236.2 1649 CB6648_redo III 8433819 1 A C 3 1.12 63 2 5 5 10 @,GG,,ccc,, point 0 nongenic -509 upstream ZK1236.9 160826 CB6648_redo III 8442015 127 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1379 to 1506 bp into ZK1236.7.2 160826 CB6648_redo III 8442015 127 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1382 to 1509 bp into ZK1236.7.3 160826 CB6648_redo III 8442015 127 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1384 to 1511 bp into ZK1236.7.1 160827 CB6648_redo III 8442194 84 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1243 to 1327 bp into ZK1236.7.2 160827 CB6648_redo III 8442194 84 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1246 to 1330 bp into ZK1236.7.3 160827 CB6648_redo III 8442194 84 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1248 to 1332 bp into ZK1236.7.1 1652 CB6648_redo III 8461978 1 C A 255 1.00 63 62 0 51 51 @aaaAaAAAAaAAAaaAAaaaaAaAAaaAAAaaAAaaaAAaAaaaaaaaAaa point 0 SNP none haw44763 1654 CB6648_redo III 8503007 1 A T 255 1.00 63 62 0 32 32 @TTTTTttttTtTTTTTTTtTTTttTtTTTTTT point 0 SNP none haw44793 1655 CB6648_redo III 8563931 1 G A 255 1.00 63 62 0 21 21 @aaaAaaAAAAAAAAAAaaaAA point 0 SNP none haw44859 4385 CB6648_redo III 8574370 0 X X -1000 -999.99 -1000 -1000 3 -2 1 @...aaa indel 0 nongenic -6640 upstream C06E1.3 1656 CB6648_redo III 8575624 1 C T 216 1.00 63 62 0 9 9 @TtTttTTtt point 0 nongenic -5385 upstream C06E1.3 1657 CB6648_redo III 8583354 1 C T 169 1.00 63 62 0 6 6 @ttTTTT point 0 three_prime_UTR none C06E1.3 1658 CB6648_redo III 8583358 1 G C 57 1.00 63 4 0 4 4 @CCCC point 0 three_prime_UTR none C06E1.3 4387 CB6648_redo III 8650750 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @...,GGg indel 0 inframe none F22B7.2 1665 CB6648_redo III 8684179 1 T A 255 1.00 63 62 0 33 33 @AaaaAaaAAAAAAAaaaaAAaAAAAAaAaaaAa point 0 SNP none haw44984 1666 CB6648_redo III 8684208 1 C T 255 1.00 63 62 0 36 36 @TTTTtTtttTtTtTtttTTTTttttTTtTttttTtt point 0 SNP none haw44985 1668 CB6648_redo III 8693607 1 G C 255 1.00 63 62 0 35 35 @CCCcccCcCccCccccccCcccccCCcccccCccc point 0 missense TGT->TCT[Cys->Ser] B0303.7a 1669 CB6648_redo III 8693611 1 G A 255 1.00 63 62 0 35 35 @AAaaaAaAaaAaaaaaaAaaaaaAAaaaaaAaaaa point 0 silent GGG->GGA[Gly->Gly] B0303.7a 1672 CB6648_redo III 8693743 1 G T 213 1.00 63 62 0 7 7 @TtTtTTt point 0 nongenic -3135 upstream B0303.7b 1672 CB6648_redo III 8693743 1 G T 213 1.00 63 62 0 7 7 @TtTtTTt point 0 nongenic 200 into B0303.7a 1672 CB6648_redo III 8693743 1 G T 213 1.00 63 62 0 7 7 @TtTtTTt point 0 nongenic 362 downstream B0303.4.1 1672 CB6648_redo III 8693743 1 G T 213 1.00 63 62 0 7 7 @TtTtTTt point 0 nongenic 892 downstream B0303.4.2 1673 CB6648_redo III 8693773 1 A T 255 1.00 63 62 0 29 29 @TtTtTTtTtTTTTTTTTtTTTTTtTTTTT point 0 SNP none haw44992 1675 CB6648_redo III 8701737 1 C T 255 1.00 63 62 0 48 48 @TTtTttttTTTTtttTttTTTTTtttTtttttTTttTttTTTTTtTTt point 0 silent TCC->TCT[Ser->Ser] B0303.9 1675 CB6648_redo III 8701737 1 C T 255 1.00 63 62 0 48 48 @TTtTttttTTTTtttTttTTTTTtttTtttttTTttTttTTTTTtTTt point 0 SNP none haw44997 1676 CB6648_redo III 8704000 1 T A 255 1.00 63 62 0 44 44 @AAAAaAAAAAaaAaaaaAAAaaaaaaAAaAaaAAAAaAaaAaaa point 0 SNP none haw44999 1677 CB6648_redo III 8706587 1 G C 12 1.00 63 62 2 3 5 @,,CCC point 0 missense CTT->GTT[Leu->Val] B0303.11 1678 CB6648_redo III 8710964 1 T A 255 1.00 63 62 0 25 25 @AAAaaAAAAAAAAAAAAaAAaAAAa point 0 SNP none haw45004 1679 CB6648_redo III 8711826 1 C T 237 1.00 63 62 0 13 13 @TTTTTTTTTTtTT point 0 SNP none haw45005 1680 CB6648_redo III 8711855 1 C A 87 1.00 63 62 1 5 6 @,AaAAa point 0 nongenic -1836 upstream B0303.11 1681 CB6648_redo III 8712013 1 G A 255 1.50 63 62 0 43 43 @aaaaaaAaaAaaaaaAaaaaaaaaaAAAaaaaaaaaAaAAAAA point 0 SNP none haw45006 1682 CB6648_redo III 8713028 1 A T 79 1.00 63 62 1 5 6 @Ttttt, point 0 nongenic -3009 upstream B0303.11 1682 CB6648_redo III 8713028 1 A T 79 1.00 63 62 1 5 6 @Ttttt, point 0 nongenic 866 downstream B0303.14 1683 CB6648_redo III 8713033 1 C T 123 1.00 63 62 1 6 7 @.TTTTTT point 0 nongenic -3014 upstream B0303.11 1683 CB6648_redo III 8713033 1 C T 123 1.00 63 62 1 6 7 @.TTTTTT point 0 nongenic 861 downstream B0303.14 1684 CB6648_redo III 8733582 1 A T 255 1.00 63 62 0 59 59 @TtttttTttTTTttTtTttTTTtTTTtttTtttttttttTtTttTTttTTtTTtTTtTT point 0 SNP none haw45014,uCE3-1086 1685 CB6648_redo III 8733611 1 A T 255 1.00 63 62 0 68 68 @TtttttttttTtTttTTttTTtTTtTTtTTtTttttTtttTTTttTtTTtTtTtTttTtTTTtttTtT point 0 SNP none haw45015,uCE3-1087 1687 CB6648_redo III 8740761 1 C T 255 1.00 63 62 0 38 38 @TttTtTTTTttTtTTTTttttTTTtTtTTTTTTtTTTt point 0 SNP none haw45017 1688 CB6648_redo III 8742380 1 G A 255 1.00 63 62 0 49 49 @aAAaaAaaaaAAaaaaaAaaaAAAAAaAaAaaaaAAaAaAAAAAaaAaa point 0 SNP none haw45020 1688 CB6648_redo III 8742380 1 G A 255 1.00 63 62 0 49 49 @aAAaaAaaaaAAaaaaaAaaaAAAAAaAaAaaaaAAaAaAAAAAaaAaa point 0 three_prime_UTR none ZK370.6 1689 CB6648_redo III 8744441 1 C T 255 1.00 63 62 0 23 23 @TTtttttTtTTttTTttttTTTT point 0 SNP none haw45021 1690 CB6648_redo III 8752722 1 C T 255 1.00 63 62 0 39 39 @TTttttTTttttTtTTTtttTTTtTtttTTtTTttttTT point 0 SNP none haw45024 1691 CB6648_redo III 8758065 1 T C 255 1.00 63 62 0 58 58 @cCccccCCCcCccCCCCCcCcCCccCCcCCCcCCCcccCCCCCcCCCcCCCCcCCcCC point 0 SNP none haw45027 1692 CB6648_redo III 8810252 1 T A 137 1.50 63 18 0 6 6 @aAaaaA point 0 nongenic -1016 upstream F54F2.8.1 1692 CB6648_redo III 8810252 1 T A 137 1.50 63 18 0 6 6 @aAaaaA point 0 nongenic -8555 upstream F54F2.1 1693 CB6648_redo III 8810253 1 T A 19 1.25 63 62 3 5 8 @aAaaa,,. point 0 nongenic -1017 upstream F54F2.8.1 1693 CB6648_redo III 8810253 1 T A 19 1.25 63 62 3 5 8 @aAaaa,,. point 0 nongenic -8554 upstream F54F2.1 1696 CB6648_redo III 8810391 1 G A 155 1.00 63 62 0 6 6 @AAAAAA point 0 nongenic -1155 upstream F54F2.8.1 1696 CB6648_redo III 8810391 1 G A 155 1.00 63 62 0 6 6 @AAAAAA point 0 nongenic -8416 upstream F54F2.1 1697 CB6648_redo III 8810392 1 T G 159 1.00 63 62 0 6 6 @GGGGGG point 0 nongenic -1156 upstream F54F2.8.1 1697 CB6648_redo III 8810392 1 T G 159 1.00 63 62 0 6 6 @GGGGGG point 0 nongenic -8415 upstream F54F2.1 1698 CB6648_redo III 8810393 1 C T 166 1.12 63 62 0 7 7 @TTTTTTT point 0 nongenic -1157 upstream F54F2.8.1 1698 CB6648_redo III 8810393 1 C T 166 1.12 63 62 0 7 7 @TTTTTTT point 0 nongenic -8414 upstream F54F2.1 1703 CB6648_redo III 8890775 1 G T 61 1.00 63 62 0 7 7 @CcTttTT point 0 SNP none haw45052 1706 CB6648_redo III 8929470 1 A C 5 1.00 63 62 4 4 8 @,,..CccC point 0 nongenic -2593 upstream ZK643.1 1706 CB6648_redo III 8929470 1 A C 5 1.00 63 62 4 4 8 @,,..CccC point 0 nongenic -3032 upstream ZK643.7 1708 CB6648_redo III 9025485 1 A T 255 1.00 63 62 0 41 41 @tTTTTTTTTtTTtTTTTTtTTTtTTTTttTttTttttTtTt point 0 SNP none haw45122 1709 CB6648_redo III 9066055 1 C G 255 1.00 63 62 0 28 28 @gggGgGgGgggGgGgGGgGGgGgggTGg point 0 nongenic 5616 into R107.8 1710 CB6648_redo III 9066056 1 G C 255 1.00 63 62 0 27 27 @ccCcCcCcccCcCcCCcCCcCcccCCc point 0 nongenic 5615 into R107.8 1711 CB6648_redo III 9101165 1 G T 221 0.00 63 62 0 14 14 @tttttttttttttt point 0 missense CAA->AAA[Gln->Lys] ZK507.1 1712 CB6648_redo III 9101166 1 C T 221 0.00 63 62 0 14 14 @tttttttttttttt point 0 non_start ATG->ATA[Met->Ile] ZK507.1 1713 CB6648_redo III 9101190 1 T A 66 2.00 63 62 2 4 6 @aaaa., point 0 nongenic -21 upstream ZK507.1 1713 CB6648_redo III 9101190 1 T A 66 2.00 63 62 2 4 6 @aaaa., point 0 nongenic -86 upstream ZK507.3 1714 CB6648_redo III 9101199 1 G A 70 2.00 63 62 2 4 6 @aaaa., point 0 nongenic -30 upstream ZK507.1 1714 CB6648_redo III 9101199 1 G A 70 2.00 63 62 2 4 6 @aaaa., point 0 nongenic -77 upstream ZK507.3 4404 CB6648_redo III 9150073 0 X X -1000 -999.99 -1000 -1000 2 2 4 @,.AA indel 0 nongenic -2760 downstream F54G8.4 4404 CB6648_redo III 9150073 0 X X -1000 -999.99 -1000 -1000 2 2 4 @,.AA indel 0 nongenic -4952 upstream F54G8.1 4405 CB6648_redo III 9260712 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,.,AAaa indel 0 nongenic -25243 upstream K01B6.1 4405 CB6648_redo III 9260712 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,.,AAaa indel 0 nongenic -263 downstream M01A8.2a 4405 CB6648_redo III 9260712 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,.,AAaa indel 0 nongenic -607 downstream M01A8.2b 4405 CB6648_redo III 9260712 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,.,AAaa indel 0 nongenic 791 downstream M01A8.1 1715 CB6648_redo III 9263153 1 G A 255 1.00 63 62 0 50 50 @AaAaAaaaaaaaAaaAAaAaAAaaaaaaaaaAAaAaaAAaaAAaaaaaAA point 0 SNP none haw45230 1716 CB6648_redo III 9264263 1 G A 255 1.00 63 62 0 37 37 @AAaAaaaAAaaaaaAaAAAAAAAAaaAaaaAaaaaaa point 0 SNP none haw45233 1722 CB6648_redo III 9298564 1 C T 255 1.00 63 62 0 39 39 @tTtTttTtTttTtTtttTttTtttTTttTtTtTTTtttt point 0 SNP none haw45256 1723 CB6648_redo III 9341369 1 T C 255 1.00 63 62 0 55 55 @CCcCCcCccccCCcCCCCCCCCccccccccccCCccccCCCcccCCCcCCcCccc point 0 missense AGA->GGA[Arg->Gly] K04H4.1a 1723 CB6648_redo III 9341369 1 T C 255 1.00 63 62 0 55 55 @CCcCCcCccccCCcCCCCCCCCccccccccccCCccccCCCcccCCCcCCcCccc point 0 SNP none haw45266 1724 CB6648_redo III 9350628 1 C T 255 1.00 63 62 0 24 24 @TtTTtTTTtTttttttTttttttT point 0 missense GGA->GAA[Gly->Glu] K04H4.2c.1,K04H4.2c.2 1724 CB6648_redo III 9350628 1 C T 255 1.00 63 62 0 24 24 @TtTTtTTTtTttttttTttttttT point 0 SNP none haw45273 1725 CB6648_redo III 9350653 1 C T 255 1.00 63 62 0 33 33 @TttttttTTTttTtTttTTTtTtTTttTTtTTt point 0 missense GAG->AAG[Glu->Lys] K04H4.2c.1,K04H4.2c.2 1725 CB6648_redo III 9350653 1 C T 255 1.00 63 62 0 33 33 @TttttttTTTttTtTttTTTtTtTTttTTtTTt point 0 SNP none haw45274 1726 CB6648_redo III 9350660 1 C T 255 1.00 63 62 0 34 34 @tTTTttTtTttTTTtTtTTttTTtTTtTttTtTT point 0 silent AGG->AGA[Arg->Arg] K04H4.2c.1,K04H4.2c.2 1726 CB6648_redo III 9350660 1 C T 255 1.00 63 62 0 34 34 @tTTTttTtTttTTTtTtTTttTTtTTtTttTtTT point 0 SNP none haw45275 1727 CB6648_redo III 9352561 1 C T 255 1.00 63 62 0 53 53 @tttttTtTTttTTtttTtTTtTTtTttttttttTtTtttTTtTTttTTtTtTT point 0 silent GAG->GAA[Glu->Glu] K04H4.2c.1,K04H4.2c.2 1727 CB6648_redo III 9352561 1 C T 255 1.00 63 62 0 53 53 @tttttTtTTttTTtttTtTTtTTtTttttttttTtTtttTTtTTttTTtTtTT point 0 SNP none haw45277 1728 CB6648_redo III 9355598 1 A C 255 1.00 63 62 0 39 39 @cccccCCcCccCCccccCcCCccCccCccCccCcccccc point 0 nongenic -216 upstream K04H4.2a.1,K04H4.2a.2 1728 CB6648_redo III 9355598 1 A C 255 1.00 63 62 0 39 39 @cccccCCcCccCCccccCcCCccCccCccCccCcccccc point 0 nongenic -234 upstream K04H4.2a.3,K04H4.2b,K04H4.2c.1,K04H4.2c.2 1728 CB6648_redo III 9355598 1 A C 255 1.00 63 62 0 39 39 @cccccCCcCccCCccccCcCCccCccCccCccCcccccc point 0 nongenic -4570 upstream K04H4.5 1729 CB6648_redo III 9355599 1 C G 255 1.00 63 62 0 40 40 @ggggGGgGggGGggggGgGGggGggGggGggGggggggGg point 0 nongenic -217 upstream K04H4.2a.1,K04H4.2a.2 1729 CB6648_redo III 9355599 1 C G 255 1.00 63 62 0 40 40 @ggggGGgGggGGggggGgGGggGggGggGggGggggggGg point 0 nongenic -235 upstream K04H4.2a.3,K04H4.2b,K04H4.2c.1,K04H4.2c.2 1729 CB6648_redo III 9355599 1 C G 255 1.00 63 62 0 40 40 @ggggGGgGggGGggggGgGGggGggGggGggGggggggGg point 0 nongenic -4569 upstream K04H4.5 1730 CB6648_redo III 9409056 1 T G 144 1.69 63 62 0 16 16 @GgGGGGGgggGggggg point 0 nongenic -2513 upstream T26G10.1 1731 CB6648_redo III 9409292 1 C G 255 1.25 63 62 0 16 16 @ggGgGggGgggGgggG point 0 nongenic -2749 upstream T26G10.1 1735 CB6648_redo III 9448445 1 C G 255 1.00 63 62 0 28 28 @gggGGggGGGggGgggGGggGgGGgGGg point 0 SNP none haw45304 1736 CB6648_redo III 9449797 1 C T 255 1.00 63 62 0 30 30 @ttTtTTtttttTtTTTttTTTTTTTTtTTt point 0 SNP none haw45305 1737 CB6648_redo III 9450593 1 C A 255 1.00 63 62 0 51 51 @AaaaaaaaAAaAaaaaAaaaAaaaAAAaaaAaAAaAAaAaaAaaaAAAaaa point 0 SNP none haw45306 1738 CB6648_redo III 9451505 1 G C 255 1.00 63 62 0 42 42 @CcCccccCCccCCccccCCCCcCCcCccccCcccCCcCCcCC point 0 SNP none haw45307 1738 CB6648_redo III 9451505 1 G C 255 1.00 63 62 0 42 42 @CcCccccCCccCCccccCCCCcCCcCccccCcccCCcCCcCC point 0 three_prime_UTR none F54C8.7a 1739 CB6648_redo III 9452439 1 G T 255 1.00 63 62 1 32 33 @ttTttTTttttttTttTtTttttTtttTTTTt. point 0 SNP none haw45308,snp_F54C8[1] 1740 CB6648_redo III 9463254 1 G A 55 1.00 63 62 2 5 7 @AaAaa,, point 0 nongenic -2419 upstream B0464.9 1740 CB6648_redo III 9463254 1 G A 55 1.00 63 62 2 5 7 @AaAaa,, point 0 nongenic 233 into B0464.6.2,B0464.6.3 1740 CB6648_redo III 9463254 1 G A 55 1.00 63 62 2 5 7 @AaAaa,, point 0 nongenic 365 downstream B0464.5b.1 1740 CB6648_redo III 9463254 1 G A 55 1.00 63 62 2 5 7 @AaAaa,, point 0 nongenic 365 into B0464.6.1 1740 CB6648_redo III 9463254 1 G A 55 1.00 63 62 2 5 7 @AaAaa,, point 0 nongenic 392 downstream B0464.5c.1,B0464.5c.2 1741 CB6648_redo III 9479166 1 G A 255 1.00 63 62 0 39 39 @aaAAaaaaAaAAAaaaaaAaaaaaAaaaaAaAAAAaAAA point 0 SNP none haw45312 160828 CB6648_redo III 9571116 148 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 7757 to 7905 bp into C48B4.4a,C48B4.4b,C48B4.4c 160828 CB6648_redo III 9571116 148 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 8510 to 8658 bp into C48B4.4d 1748 CB6648_redo III 9583725 1 A T 255 1.00 63 62 0 33 33 @TtTtTTTTtTtTttTTTttTTTtttttTTtTTt point 0 SNP none haw45342 1749 CB6648_redo III 9590111 1 T C 100 1.00 63 62 3 9 12 @,.,CCcCCCccc point 0 nongenic -7849 upstream C48B4.3 1749 CB6648_redo III 9590111 1 T C 100 1.00 63 62 3 9 12 @,.,CCcCCCccc point 0 nongenic 1983 into C48B4.1.2 1749 CB6648_redo III 9590111 1 T C 100 1.00 63 62 3 9 12 @,.,CCcCCCccc point 0 nongenic 1985 into C48B4.1.1 1750 CB6648_redo III 9590112 1 G T 84 1.00 63 62 3 9 12 @,.,TTtTTTttt point 0 nongenic -7850 upstream C48B4.3 1750 CB6648_redo III 9590112 1 G T 84 1.00 63 62 3 9 12 @,.,TTtTTTttt point 0 nongenic 1982 into C48B4.1.2 1750 CB6648_redo III 9590112 1 G T 84 1.00 63 62 3 9 12 @,.,TTtTTTttt point 0 nongenic 1984 into C48B4.1.1 1751 CB6648_redo III 9637545 1 A G 46 1.00 63 40 0 4 4 @Gggc point 0 nongenic -527 upstream F58A4.11 1752 CB6648_redo III 9643534 1 C G 255 1.00 63 62 0 34 34 @GgGgGGGGgggGGggGggGggGgGggGgGGggGg point 0 SNP none uCE3-1110 1753 CB6648_redo III 9643535 1 G C 255 1.00 63 62 0 32 32 @CcCCCCcccCCccCccCccCcCccCcCCccCc point 0 SNP none uCE3-1111 1754 CB6648_redo III 9647729 1 G T 95 1.00 63 0 0 4 4 @ttTt point 0 nongenic -10711 upstream F58A4.11 1756 CB6648_redo III 9754430 1 C A 255 1.00 63 62 0 37 37 @aAAAAaAAAAAAAaaAAaAaAAAAaaaaaAAaaaaaA point 0 missense GAG->GAT[Glu->Asp] T05G5.8.1,T05G5.8.2 1756 CB6648_redo III 9754430 1 C A 255 1.00 63 62 0 37 37 @aAAAAaAAAAAAAaaAAaAaAAAAaaaaaAAaaaaaA point 0 SNP none haw45405 1757 CB6648_redo III 9783614 1 T C 8 1.00 63 62 2 3 5 @ccc,, point 0 nongenic 391 into R10E11.6a,R10E11.6b 1757 CB6648_redo III 9783614 1 T C 8 1.00 63 62 2 3 5 @ccc,, point 0 nongenic 491 downstream R10E11.2.1,R10E11.2.2 1758 CB6648_redo III 9785421 1 G A 51 1.00 63 50 0 4 4 @Ccaa point 0 three_prime_UTR none R10E11.6b 1760 CB6648_redo III 9793256 1 A C 50 1.00 63 60 3 7 10 @cccccCC,.. point 0 nongenic -1009 upstream ZK632.1a 1760 CB6648_redo III 9793256 1 A C 50 1.00 63 60 3 7 10 @cccccCC,.. point 0 nongenic -3715 upstream R10E11.5 1760 CB6648_redo III 9793256 1 A C 50 1.00 63 60 3 7 10 @cccccCC,.. point 0 nongenic 202 into R10E11.9 1761 CB6648_redo III 9796154 1 T C 255 1.00 63 62 0 63 63 @CCcCccCccCcCCCCccCCccCcCCcccccccCCcCcCcCCcCccCcccCccCccccccCCcc point 0 SNP none haw45434 1764 CB6648_redo III 9853804 1 T G 9 1.50 63 6 1 4 5 @GGGg, point 0 nongenic 170 downstream K11H3.1b 1764 CB6648_redo III 9853804 1 T G 9 1.50 63 6 1 4 5 @GGGg, point 0 nongenic 397 downstream K11H3.1a,K11H3.1c.1,K11H3.1c.2,K11H3.1d.1,K11H3.1d.2 1764 CB6648_redo III 9853804 1 T G 9 1.50 63 6 1 4 5 @GGGg, point 0 nongenic 83 downstream K11H3.3 1765 CB6648_redo III 9870315 1 T G 81 1.00 63 62 4 8 12 @....gGGGGggg point 0 nongenic -2630 upstream ZK757.4a,ZK757.4c 1765 CB6648_redo III 9870315 1 T G 81 1.00 63 62 4 8 12 @....gGGGGggg point 0 nongenic 692 into ZK757.1 1766 CB6648_redo III 9870316 1 G C 90 1.00 63 62 4 8 12 @....cCCCCccc point 0 nongenic -2631 upstream ZK757.4a,ZK757.4c 1766 CB6648_redo III 9870316 1 G C 90 1.00 63 62 4 8 12 @....cCCCCccc point 0 nongenic 691 into ZK757.1 1768 CB6648_redo III 9913766 1 C A 255 1.12 63 62 1 56 57 @AAAAAAaAAaaAaaaaAAaaAAAaaAaAaAA.aaaaaaaAaaaaaAAaaAaaAaaaa point 0 nongenic -3211 upstream F40F12.5 1768 CB6648_redo III 9913766 1 C A 255 1.12 63 62 1 56 57 @AAAAAAaAAaaAaaaaAAaaAAAaaAaAaAA.aaaaaaaAaaaaaAAaaAaaAaaaa point 0 nongenic -390 upstream F40F12.7.1,F40F12.7.2 1768 CB6648_redo III 9913766 1 C A 255 1.12 63 62 1 56 57 @AAAAAAaAAaaAaaaaAAaaAAAaaAaAaAA.aaaaaaaAaaaaaAAaaAaaAaaaa point 0 nongenic -670 upstream F40F12.7.3 1769 CB6648_redo III 9918742 1 C G 255 1.00 63 62 0 35 35 @gGGGGGGGgGgGGGGGGGGGGggGGggGGGGgggg point 0 silent GGG->GGC[Gly->Gly] F40F12.3 1770 CB6648_redo III 9920715 1 G T 255 1.00 63 62 0 29 29 @tttttTtTttTTTTtTTtTTtTtTtTttt point 0 SNP none haw45505 1771 CB6648_redo III 9920824 1 C T 255 1.00 63 62 0 9 9 @TttttTTTt point 0 SNP none haw45506 1772 CB6648_redo III 9920856 1 G T 255 1.00 63 62 0 35 35 @TttttTTTttTttTtTTtttTtTtttTttttTTTt point 0 SNP none haw45507 1773 CB6648_redo III 9938706 1 T C 85 4.31 63 6 34 72 106 @,Cc.ccccC.CCcCcc,,CCccC,Cc.CCCCCccCcCCcCCCCCc.CCCCCcCccCC.cccCCccCCCc..cccccccccCC,...,c,,.......,. point 0 nongenic 902 into K03H1.5 1774 CB6648_redo III 9938707 1 C A 7 4.31 63 62 50 52 102 @aa.A.AA.,.a,,,AaaA,A..AAAAAaa,aAAaAAAAAa.AA,AAaA.a,A..aaAAaaA,Aa..a.aaaa.aa,,,...,.,,.......,.,..,. point 0 nongenic 901 into K03H1.5 1777 CB6648_redo III 9942889 1 T A 255 1.00 63 62 0 46 46 @AAAAaAAAaaaaaaAAAAAAAaaaAAAAaaAAAAAaaAAaaaaAaA point 0 SNP none haw45518 1778 CB6648_redo III 9956571 1 A C 255 1.00 63 62 0 29 29 @CCcCccCcCCccCcCcccCcccCCCCccc point 0 nongenic -458 upstream K03H1.2.1,K03H1.2.2 1778 CB6648_redo III 9956571 1 A C 255 1.00 63 62 0 29 29 @CCcCccCcCCccCcCcccCcccCCCCccc point 0 nongenic -682 upstream R10E12.1a 1778 CB6648_redo III 9956571 1 A C 255 1.00 63 62 0 29 29 @CCcCccCcCCccCcCcccCcccCCCCccc point 0 nongenic -683 upstream R10E12.1b,R10E12.1c,R10E12.1d 1780 CB6648_redo III 9971899 1 G T 166 1.00 63 16 0 9 9 @ttttttttt point 0 nongenic 1863 into R10E12.2 4427 CB6648_redo III 10004045 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,,ggg indel 0 nongenic -363 upstream C05B5.11 1781 CB6648_redo III 10016572 1 A G 255 1.00 63 62 0 24 24 @gGGgGggGgGGGGgGGGgGGgGGg point 0 SNP none haw45557 1782 CB6648_redo III 10019611 1 C T 3 1.00 63 62 4 4 8 @..,.tTtt point 0 SNP none haw45563 1783 CB6648_redo III 10019932 1 G T 255 1.00 63 62 0 26 26 @tTTtTtTTTTTTTTTTTTTTtTtttT point 0 SNP none haw45564 1785 CB6648_redo III 10027251 1 C A 57 1.00 63 62 1 3 4 @AAA. point 0 nongenic -892 upstream M04D8.3 1785 CB6648_redo III 10027251 1 C A 57 1.00 63 62 1 3 4 @AAA. point 0 nongenic 668 downstream M04D8.2.2 1785 CB6648_redo III 10027251 1 C A 57 1.00 63 62 1 3 4 @AAA. point 0 nongenic 670 downstream M04D8.2.1 1787 CB6648_redo III 10031243 1 T A 52 1.00 63 62 1 4 5 @,aaAA point 0 nongenic -222 upstream M04D8.4 1787 CB6648_redo III 10031243 1 T A 52 1.00 63 62 1 4 5 @,aaAA point 0 nongenic 996 downstream M04D8.5 1788 CB6648_redo III 10031246 1 G T 175 1.00 63 52 0 5 5 @ttTTt point 0 SNP none uCE3-1131 1789 CB6648_redo III 10032182 1 C T 96 1.00 63 50 2 5 7 @ttttT., point 0 SNP none haw45577 1790 CB6648_redo III 10032184 1 A C 51 1.00 63 62 2 5 7 @ccccC., point 0 nongenic -1163 upstream M04D8.4 1790 CB6648_redo III 10032184 1 A C 51 1.00 63 62 2 5 7 @ccccC., point 0 nongenic 55 downstream M04D8.5 1791 CB6648_redo III 10034770 1 A T 133 1.00 63 62 2 7 9 @..TTttttT point 0 nongenic -1127 upstream M04D8.6 1791 CB6648_redo III 10034770 1 A T 133 1.00 63 62 2 7 9 @..TTttttT point 0 nongenic -1560 upstream M04D8.5 1791 CB6648_redo III 10034770 1 A T 133 1.00 63 62 2 7 9 @..TTttttT point 0 nongenic 227 into M04D8.8 1792 CB6648_redo III 10035095 1 G T 255 1.00 63 62 0 22 22 @TtTTTTTTtttTTTTTtTtTTT point 0 SNP none haw45579 1793 CB6648_redo III 10035117 1 G T 191 1.00 63 62 0 7 7 @TtTtTTT point 0 nongenic -780 upstream M04D8.6 1793 CB6648_redo III 10035117 1 G T 191 1.00 63 62 0 7 7 @TtTtTTT point 0 nongenic 120 downstream M04D8.8 1794 CB6648_redo III 10035128 1 G T 131 1.00 63 62 0 4 4 @TTtT point 0 nongenic -769 upstream M04D8.6 1794 CB6648_redo III 10035128 1 G T 131 1.00 63 62 0 4 4 @TTtT point 0 nongenic 131 downstream M04D8.8 1795 CB6648_redo III 10035139 1 C T 173 1.00 63 62 0 5 5 @TtTTt point 0 nongenic -758 upstream M04D8.6 1795 CB6648_redo III 10035139 1 C T 173 1.00 63 62 0 5 5 @TtTTt point 0 nongenic 142 downstream M04D8.8 1796 CB6648_redo III 10035170 1 C T 255 1.56 63 62 0 36 36 @TtTTtTTttTtttttTttTtttTTTTtTttttTttt point 0 nongenic -727 upstream M04D8.6 1796 CB6648_redo III 10035170 1 C T 255 1.56 63 62 0 36 36 @TtTTtTTttTtttttTttTtttTTTTtTttttTttt point 0 nongenic 173 downstream M04D8.8 1797 CB6648_redo III 10035184 1 A T 255 3.31 63 62 0 46 46 @TTtTTttTtttttTttTtttTTTTtTttttTtttTtttttTttttT point 0 nongenic -713 upstream M04D8.6 1797 CB6648_redo III 10035184 1 A T 255 3.31 63 62 0 46 46 @TTtTTttTtttttTttTtttTTTTtTttttTtttTtttttTttttT point 0 nongenic 187 downstream M04D8.8 1798 CB6648_redo III 10035309 1 G T 255 1.00 63 62 0 54 54 @tTTTTTTTtTTTTTtTTTTtTTTtTtTTtTTTTtttTtTTTTTTtTTTttTTTT point 0 SNP none haw45580 1799 CB6648_redo III 10035384 1 G A 255 1.00 63 62 0 49 49 @AAAaAAAAaaAaAaAaaAaaAaaAAaaAAAaAaaAAAAaaAaAaaaaaA point 0 SNP none haw45581 1800 CB6648_redo III 10035425 1 C A 255 1.50 63 62 0 58 58 @aAaAaaaaaAaaAAAAAAAaAAaaAAAAaaAAaAaaAAAaAAAAAAaaAAaAAAaaAA point 0 nongenic -472 upstream M04D8.6 1800 CB6648_redo III 10035425 1 C A 255 1.50 63 62 0 58 58 @aAaAaaaaaAaaAAAAAAAaAAaaAAAAaaAAaAaaAAAaAAAAAAaaAAaAAAaaAA point 0 nongenic 428 downstream M04D8.8 1801 CB6648_redo III 10036023 1 G A 255 1.00 63 62 0 44 44 @aaaaaAatAaAaaaaAAAaaaAaaaAaAaaAaAaaAaaAaAaaa point 0 SNP none haw45582 160829 CB6648_redo III 10100796 59 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 623 to 682 bp into T16H12.6 1805 CB6648_redo III 10100858 1 C G 75 1.00 63 58 0 4 4 @Gggg point 0 nongenic -2883 upstream T16H12.5b.1 1805 CB6648_redo III 10100858 1 C G 75 1.00 63 58 0 4 4 @Gggg point 0 nongenic 620 into T16H12.6 4435 CB6648_redo III 10131665 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,.tt indel 0 nongenic -453 downstream ZK1128.6b.1,ZK1128.6b.2 4435 CB6648_redo III 10131665 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,.tt indel 0 nongenic -5301 upstream ZK1128.7 4435 CB6648_redo III 10131665 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,.tt indel 0 nongenic -954 downstream ZK1128.6a 1814 CB6648_redo III 10131666 1 C T 15 1.00 63 16 2 2 4 @Tt.. point 0 nongenic -5299 upstream ZK1128.7 1814 CB6648_redo III 10131666 1 C T 15 1.00 63 16 2 2 4 @Tt.. point 0 nongenic 452 into ZK1128.6b.1,ZK1128.6b.2 1814 CB6648_redo III 10131666 1 C T 15 1.00 63 16 2 2 4 @Tt.. point 0 nongenic 953 into ZK1128.6a 1817 CB6648_redo III 10147954 1 T G 171 1.56 63 62 0 7 7 @gGgggGg point 0 nongenic -4734 upstream K08E5.2a,K08E5.2b.2,K08E5.2b.3 1818 CB6648_redo III 10148031 1 C G 255 1.25 63 62 0 29 29 @GgggGGgggGggGGGgGgGGGGgGgGggg point 0 nongenic -4657 upstream K08E5.2a,K08E5.2b.2,K08E5.2b.3 1830 CB6648_redo III 10227407 1 C T 3 6.75 0 6 78 81 159 @.t...,..,Tt.t,..T,...,,T,Tt.T.T.,tt.t,Ttt.ttTTT,,,t,,,T.ttTtTTT..TtT,TTT,ttT,,,t,TTtTtTT,tt,Tt,,.tT point 0 nongenic 681 downstream Y70G10A.2 1833 CB6648_redo III 10277507 1 C T 255 1.00 63 62 0 36 36 @tttTtTttttttTtttTTtttTtttTtTTTTTtTTt point 0 nongenic -10231 upstream R01H10.7 1833 CB6648_redo III 10277507 1 C T 255 1.00 63 62 0 36 36 @tttTtTttttttTtttTTtttTtttTtTTTTTtTTt point 0 nongenic -1515 upstream K10G9.3 1833 CB6648_redo III 10277507 1 C T 255 1.00 63 62 0 36 36 @tttTtTttttttTtttTTtttTtttTtTTTTTtTTt point 0 nongenic 967 into R01H10.8 1834 CB6648_redo III 10282658 1 T G 60 1.00 63 22 1 4 5 @GGGg, point 0 nongenic -3158 upstream K10G9.2 1835 CB6648_redo III 10282659 1 C T 22 1.00 63 60 2 4 6 @TTTt,, point 0 nongenic -3157 upstream K10G9.2 1836 CB6648_redo III 10287323 1 C T 255 1.00 63 62 0 30 30 @TttTTTTtTTttTtTTTtTTTtTTTTtTTt point 0 SNP none haw45760 1838 CB6648_redo III 10289344 1 G C 255 1.00 63 62 0 35 35 @CCCcCccccCCCccCcccCCcCcCCCCCCCCcCCC point 0 SNP none haw45764 1839 CB6648_redo III 10291745 1 C A 67 1.00 63 62 1 3 4 @aaa. point 0 nongenic -3282 upstream K10G9.1 1840 CB6648_redo III 10291756 1 T A 185 1.00 63 62 0 8 8 @aaaaAaaA point 0 nongenic -3271 upstream K10G9.1 1842 CB6648_redo III 10320217 1 A G 126 5.75 63 56 0 4 4 @gggg point 0 nongenic -732 upstream T07C4.10 1842 CB6648_redo III 10320217 1 A G 126 5.75 63 56 0 4 4 @gggg point 0 nongenic 301 downstream T07A5.6b 1842 CB6648_redo III 10320217 1 A G 126 5.75 63 56 0 4 4 @gggg point 0 nongenic 326 downstream T07A5.6c 1843 CB6648_redo III 10354930 1 A T 255 1.00 63 62 0 45 45 @TTtTtTtTtttttTTtttttTtTTtTTTTTtTTttTTTTTtttTT point 0 SNP none haw45800 1843 CB6648_redo III 10354930 1 A T 255 1.00 63 62 0 45 45 @TTtTtTtTtttttTTtttttTtTTtTTTTTtTTttTTTTTtttTT point 0 three_prime_UTR none T07C4.3b 1845 CB6648_redo III 10361911 1 T G 255 1.00 63 62 0 24 24 @GgGGggGGgGggGGGgGgggGGgg point 0 SNP none haw45805 1846 CB6648_redo III 10368133 1 G A 255 1.00 63 62 0 51 51 @AAAAaaAaAaaAAaAaAAAaAAaaAAaaAaaAaaAAaAAaaaAAAaaaAAA point 0 SNP none haw45808 1847 CB6648_redo III 10368773 1 C G 255 1.00 63 62 0 27 27 @ggggggggggggggggGgggggggGgG point 0 silent TCC->TCG[Ser->Ser] C38H2.1 1847 CB6648_redo III 10368773 1 C G 255 1.00 63 62 0 27 27 @ggggggggggggggggGgggggggGgG point 0 SNP none haw45810 1848 CB6648_redo III 10368847 1 G A 78 1.00 63 24 1 3 4 @Aaa, point 0 nongenic -11260 upstream T07C4.1.1 1848 CB6648_redo III 10368847 1 G A 78 1.00 63 24 1 3 4 @Aaa, point 0 nongenic -12816 upstream C38H2.2 1848 CB6648_redo III 10368847 1 G A 78 1.00 63 24 1 3 4 @Aaa, point 0 nongenic 3861 into C38H2.1 1870 CB6648_redo III 10385216 1 C G 11 1.00 63 36 1 3 4 @.ggg point 0 nongenic 15 downstream C38H2.2 1870 CB6648_redo III 10385216 1 C G 11 1.00 63 36 1 3 4 @.ggg point 0 nongenic 301 downstream C38H2.3 1871 CB6648_redo III 10388877 1 A T 107 1.00 63 62 1 5 6 @TTtTT. point 0 nongenic -2413 upstream C38H2.3 4439 CB6648_redo III 10397838 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @,,,.GG indel 0 nongenic -1872 upstream M03C11.1 1872 CB6648_redo III 10399084 1 C A 255 1.00 63 62 0 43 43 @AAaAAaAaaaAaAAaaAAaAAAAAAaaAaAaaAAAAAAaaaaa point 0 SNP none haw45839 1874 CB6648_redo III 10428172 1 A T 72 1.00 63 62 2 4 6 @,,Tttt point 0 nongenic -298 upstream M03C11.7.1 1874 CB6648_redo III 10428172 1 A T 72 1.00 63 62 2 4 6 @,,Tttt point 0 nongenic -300 upstream M03C11.7.2 1874 CB6648_redo III 10428172 1 A T 72 1.00 63 62 2 4 6 @,,Tttt point 0 nongenic 49 downstream M03C11.8 1875 CB6648_redo III 10428174 1 T G 73 1.00 63 62 2 4 6 @,,Gggg point 0 nongenic -300 upstream M03C11.7.1 1875 CB6648_redo III 10428174 1 T G 73 1.00 63 62 2 4 6 @,,Gggg point 0 nongenic -302 upstream M03C11.7.2 1875 CB6648_redo III 10428174 1 T G 73 1.00 63 62 2 4 6 @,,Gggg point 0 nongenic 47 downstream M03C11.8 1876 CB6648_redo III 10454269 1 G A 255 1.00 63 62 0 20 20 @aaaaaAaAAaAaAAAaaAaa point 0 SNP none haw45927 4441 CB6648_redo III 10460400 0 X X -1000 -999.99 -1000 -1000 9 -6 3 @,,,,,,.,,GGg indel 0 nongenic -1115 upstream D2045.1a,D2045.1b.2,D2045.1c 4441 CB6648_redo III 10460400 0 X X -1000 -999.99 -1000 -1000 9 -6 3 @,,,,,,.,,GGg indel 0 nongenic -63 upstream D2045.2 1877 CB6648_redo III 10460401 1 A G 10 1.00 63 62 4 9 13 @GGGGGGgGG,,., point 0 nongenic -1113 upstream D2045.1a,D2045.1b.2,D2045.1c 1877 CB6648_redo III 10460401 1 A G 10 1.00 63 62 4 9 13 @GGGGGGgGG,,., point 0 nongenic -64 upstream D2045.2 1878 CB6648_redo III 10482439 1 G A 255 1.00 63 62 0 30 30 @AaaAAaAaaAaaAAAAAaaaAaaaAaAAaA point 0 nongenic -5576 upstream F43D9.1 1878 CB6648_redo III 10482439 1 G A 255 1.00 63 62 0 30 30 @AaaAAaAaaAaaAAAAAaaaAaaaAaAAaA point 0 nongenic 226 into D2045.8 1878 CB6648_redo III 10482439 1 G A 255 1.00 63 62 0 30 30 @AaaAAaAaaAaaAAAAAaaaAaaaAaAAaA point 0 nongenic 407 downstream D2045.7 1880 CB6648_redo III 10498007 1 G A 255 1.00 63 62 0 30 30 @aAAAaaaaAaaAAaaaaAAAaAaaAAAaAa point 0 SNP none haw45998 1881 CB6648_redo III 10498115 1 T C 25 1.00 63 18 0 4 4 @CCCc point 0 silent TTT->TTC[Phe->Phe] F43D9.1 1882 CB6648_redo III 10498116 1 C A 25 1.00 63 18 0 4 4 @AAAa point 0 missense CAG->AAG[Gln->Lys] F43D9.1 1883 CB6648_redo III 10498117 1 A G 39 1.00 63 18 0 6 6 @GGgGGg point 0 missense CAG->CGG[Gln->Arg] F43D9.1 1884 CB6648_redo III 10498118 1 G C 19 1.00 63 24 0 5 5 @CaCCc point 0 missense CAG->CAC[Gln->His] F43D9.1 1885 CB6648_redo III 10500602 1 G A 255 1.00 63 62 0 31 31 @AaAAaaAAAAAAaaaaAAaaAaAaaaAaaaa point 0 silent TTC->TTT[Phe->Phe] F43D9.2 1885 CB6648_redo III 10500602 1 G A 255 1.00 63 62 0 31 31 @AaAAaaAAAAAAaaaaAAaaAaAaaaAaaaa point 0 SNP none haw46003 1886 CB6648_redo III 10500798 1 C T 255 1.00 63 62 0 30 30 @ttTtttttttTttttttTtttTTttttttT point 0 SNP none haw46004 1887 CB6648_redo III 10500854 1 C T 255 1.00 63 62 0 39 39 @tttttTttttTttTttTttTTtTTttTtttTttttTTTt point 0 SNP none haw46006 1888 CB6648_redo III 10501170 1 C T 255 1.00 63 62 0 33 33 @TTTTTTTTtTTTtTTTttTTTtTTTTtTTTTtt point 0 SNP none haw46010 1889 CB6648_redo III 10502428 1 G A 255 1.00 63 62 0 34 34 @aaAaaaaaaAaAaaAaAaaaAAAaaAaaAAAaaa point 0 SNP none haw46016 1890 CB6648_redo III 10502726 1 C T 255 1.00 63 62 0 22 22 @TTTTTTttTttttTTtTTttTT point 0 SNP none haw46017 1891 CB6648_redo III 10503428 1 G A 255 1.00 63 62 0 34 34 @AAaAaAAAAAAaaAAAAaaaAAAAAaAaAAAAaA point 0 nongenic 311 into F43D9.2 1891 CB6648_redo III 10503428 1 G A 255 1.00 63 62 0 34 34 @AAaAaAAAAAAaaAAAAaaaAAAAAaAaAAAAaA point 0 nongenic 531 downstream F43D9.5 1892 CB6648_redo III 10512573 1 C T 255 1.00 63 62 0 39 39 @tttttttttttttTttTttttTTTtttttTtTTttttTT point 0 SNP none haw46030 1892 CB6648_redo III 10512573 1 C T 255 1.00 63 62 0 39 39 @tttttttttttttTttTttttTTTtttttTtTTttttTT point 0 three_prime_UTR none F43D9.3a 1893 CB6648_redo III 10512825 1 C T 255 1.00 63 62 0 48 48 @TTTttTTTTttTTtTtttTtTtTTTTTTTtTtttttTTTTttTtTTTt point 0 SNP none haw46031 1893 CB6648_redo III 10512825 1 C T 255 1.00 63 62 0 48 48 @TTTttTTTTttTTtTtttTtTtTTTTTTTtTtttttTTTTttTtTTTt point 0 three_prime_UTR none F43D9.3a 1894 CB6648_redo III 10513932 1 C T 255 1.00 63 62 0 38 38 @tTTTTTTTtTTTttttTTTttTTTttTTtTtTtTtTTT point 0 SNP none haw46034 1895 CB6648_redo III 10514115 1 G A 255 1.00 63 62 0 34 34 @AaAAaaaAaAaAAaaAaAAaaaaAaaaAAaaAaA point 0 SNP none haw46035 4443 CB6648_redo III 10514381 1 X X -1000 -999.99 -1000 -1000 9 -5 4 @,,,,,..,, indel -1 SNP none uCE3-1167 1896 CB6648_redo III 10515057 1 G C 110 1.00 63 18 0 6 6 @CCccCc point 0 nongenic -5504 upstream T21C12.1b 1896 CB6648_redo III 10515057 1 G C 110 1.00 63 18 0 6 6 @CCccCc point 0 nongenic 2807 into F43D9.3b 4445 CB6648_redo III 10516781 0 X X -1000 -999.99 -1000 -1000 1 0 1 @.TTt indel 0 nongenic -1083 downstream F43D9.3b 4445 CB6648_redo III 10516781 0 X X -1000 -999.99 -1000 -1000 1 0 1 @.TTt indel 0 nongenic -3781 upstream T21C12.1b 4447 CB6648_redo III 10520155 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @.,,.TTT indel 0 nongenic -407 upstream T21C12.1b 4447 CB6648_redo III 10520155 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @.,,.TTT indel 0 nongenic -533 upstream T21C12.1a 1898 CB6648_redo III 10520298 1 A C 255 1.00 63 62 0 40 40 @cccCCcCCcCcCccCCcCCCcccccCCcccccCCCCcCcC point 0 SNP none haw46040 1899 CB6648_redo III 10528187 1 G C 255 1.00 63 62 0 47 47 @ccCCcCcccccccccCccCCcCCCCCcCcccccCccCCccccccCCC point 0 SNP none haw46050 4448 CB6648_redo III 10529997 0 X X -1000 -999.99 -1000 -1000 2 2 4 @.,aa indel 0 inframe none T21C12.1a 1903 CB6648_redo III 10534164 1 A T 11 1.00 63 10 1 3 4 @,ttt point 0 nongenic -1247 upstream T21C12.2 1904 CB6648_redo III 10534165 1 G A 27 1.00 63 10 1 5 6 @,aaaAa point 0 nongenic -1246 upstream T21C12.2 4450 CB6648_redo III 10551513 0 X X -1000 -999.99 -1000 -1000 4 -3 1 @,,.,Cccc indel 0 three_prime_UTR none T21C12.4b 4451 CB6648_redo III 10552635 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,.,gg indel 0 three_prime_UTR none T21C12.4b 1906 CB6648_redo III 10552636 1 C G 38 1.00 63 62 2 3 5 @GgG.. point 0 three_prime_UTR none T21C12.4b 1907 CB6648_redo III 10553062 1 A C 53 1.00 63 24 2 4 6 @.,CcCc point 0 missense GTT->GGT[Val->Gly] T21C12.4a,T21C12.4b 1910 CB6648_redo III 11016885 1 T C 255 1.00 63 62 0 17 17 @ccCCcccCCCCCcCccC point 0 SNP none haw46705 1913 CB6648_redo III 11294888 1 C T 255 2.00 63 62 13 54 67 @t,tT,tTTt,T,ttttttttT,TTtTTtT,tTTtttTtT,,tttTtt,tTtt,,,T,tTTTtttTtt point 0 nongenic -4304 upstream Y47D3A.22 1913 CB6648_redo III 11294888 1 C T 255 2.00 63 62 13 54 67 @t,tT,tTTt,T,ttttttttT,TTtTTtT,tTTtttTtT,,tttTtt,tTtt,,,T,tTTTtttTtt point 0 nongenic 4094 into Y47D3A.26.2,Y47D3A.26b 1913 CB6648_redo III 11294888 1 C T 255 2.00 63 62 13 54 67 @t,tT,tTTt,T,ttttttttT,TTtTTtT,tTTtttTtT,,tttTtt,tTtt,,,T,tTTTtttTtt point 0 nongenic 4099 into Y47D3A.26.1 1914 CB6648_redo III 11326567 1 G T 126 1.00 63 62 3 10 13 @TtttttttTt,., point 0 SNP none haw46989 1914 CB6648_redo III 11326567 1 G T 126 1.00 63 62 3 10 13 @TtttttttTt,., point 0 three_prime_UTR none T28D6.6 1915 CB6648_redo III 11326568 1 A G 124 1.00 63 62 3 9 12 @gggggggGg,., point 0 SNP none haw46990 1915 CB6648_redo III 11326568 1 A G 124 1.00 63 62 3 9 12 @gggggggGg,., point 0 three_prime_UTR none T28D6.6 160830 CB6648_redo III 11399936 160 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2263 to 2423 bp into Y47D3B.3 1919 CB6648_redo III 11472333 1 T A 233 1.00 63 62 0 19 19 @aaaaaaaaaaaaaaaaaaa point 0 nongenic -1644 upstream Y47D3B.9 1924 CB6648_redo III 11480573 1 G A 255 1.00 63 62 0 40 40 @aAAAaAAAAaAaAAAAAaAAAAAAAaaAAaaAAAAAAAaA point 0 SNP none haw47230 1925 CB6648_redo III 11486301 1 G C 255 1.00 63 62 0 56 56 @CccccCCCCccCcccCCCcCccCCcccCccCcccCcccCccccCCCcccCccCCCc point 0 SNP none haw47238 1926 CB6648_redo III 11504646 1 C A 255 1.00 63 62 0 65 65 @AAAaaaAaaAaAAAaaAaAaaAAAAAaaaAAAAaAAaAAAaAaaAaaaAAAaAAAaAAAaAaaAa point 0 SNP none haw47276 1927 CB6648_redo III 11516787 1 C T 255 1.00 63 62 0 65 65 @tttTTttTTtTTTttttTttTttTtttTtTTTtTtTTTTTTttttTTttTTTTTttTTTTTTTTT point 0 SNP none haw47292 1931 CB6648_redo III 11529305 1 G A 155 1.00 63 62 0 5 5 @AaaAa point 0 nongenic -5251 upstream Y66D12A.14 1931 CB6648_redo III 11529305 1 G A 155 1.00 63 62 0 5 5 @AaaAa point 0 nongenic 3051 into Y66D12A.15 1932 CB6648_redo III 11529315 1 T A 129 1.00 63 62 0 5 5 @AaaAa point 0 nongenic -5241 upstream Y66D12A.14 1932 CB6648_redo III 11529315 1 T A 129 1.00 63 62 0 5 5 @AaaAa point 0 nongenic 3061 into Y66D12A.15 1935 CB6648_redo III 11529397 1 T G 16 1.19 63 62 21 32 53 @,,,.,,,g,,,GGgG..Gg.gG.g..gg,G.ggGg.gGGGg,ggG,gGggggg point 0 nongenic -5159 upstream Y66D12A.14 1935 CB6648_redo III 11529397 1 T G 16 1.19 63 62 21 32 53 @,,,.,,,g,,,GGgG..Gg.gG.g..gg,G.ggGg.gGGGg,ggG,gGggggg point 0 nongenic 3143 into Y66D12A.15 1936 CB6648_redo III 11543276 1 G A 255 1.00 63 62 0 43 43 @aAAaaAAAAAAAaaAAaAaAAAAAaAAAaaaAaAaAAaAaAAa point 0 missense GGA->GAA[Gly->Glu] Y66D12A.14 1936 CB6648_redo III 11543276 1 G A 255 1.00 63 62 0 43 43 @aAAaaAAAAAAAaaAAaAaAAAAAaAAAaaaAaAaAAaAaAAa point 0 SNP none haw47330,uCE3-1248 1937 CB6648_redo III 11573608 1 T G 28 1.00 63 28 3 5 8 @ggGgG... point 0 nongenic -496 upstream Y66D12A.8 1937 CB6648_redo III 11573608 1 T G 28 1.00 63 28 3 5 8 @ggGgG... point 0 nongenic 446 downstream Y66D12A.9 1938 CB6648_redo III 11573609 1 G A 28 1.00 63 28 3 4 7 @aAaA... point 0 nongenic -495 upstream Y66D12A.8 1938 CB6648_redo III 11573609 1 G A 28 1.00 63 28 3 4 7 @aAaA... point 0 nongenic 447 downstream Y66D12A.9 1939 CB6648_redo III 11576713 1 C G 255 1.00 63 62 0 43 43 @GggGgGgGGGgGGgggGGgGgggGgGgggggggggggGggggg point 0 missense GCA->GGA[Ala->Gly] Y66D12A.8 1939 CB6648_redo III 11576713 1 C G 255 1.00 63 62 0 43 43 @GggGgGgGGGgGGgggGGgGgggGgGgggggggggggGggggg point 0 SNP none haw47425 1941 CB6648_redo III 11682308 1 G T 255 5.62 63 62 0 37 37 @TTTTTTTTTTTTTTTTtTTTtTTTttTTTTTTTtTTT point 0 nongenic -14263 upstream Y41C4A.6 1941 CB6648_redo III 11682308 1 G T 255 5.62 63 62 0 37 37 @TTTTTTTTTTTTTTTTtTTTtTTTttTTTTTTTtTTT point 0 nongenic 11353 into Y41C4A.4c 1941 CB6648_redo III 11682308 1 G T 255 5.62 63 62 0 37 37 @TTTTTTTTTTTTTTTTtTTTtTTTttTTTTTTTtTTT point 0 nongenic 6764 into Y41C4A.4b 1941 CB6648_redo III 11682308 1 G T 255 5.62 63 62 0 37 37 @TTTTTTTTTTTTTTTTtTTTtTTTttTTTTTTTtTTT point 0 nongenic 6857 into Y41C4A.4a 1941 CB6648_redo III 11682308 1 G T 255 5.62 63 62 0 37 37 @TTTTTTTTTTTTTTTTtTTTtTTTttTTTTTTTtTTT point 0 nongenic 6864 into Y41C4A.4d 1941 CB6648_redo III 11682308 1 G T 255 5.62 63 62 0 37 37 @TTTTTTTTTTTTTTTTtTTTtTTTttTTTTTTTtTTT point 0 nongenic 7764 into Y41C4A.4e 1943 CB6648_redo III 11694298 1 C A 230 1.00 63 62 0 14 14 @aAAaAaaaaAAaaA point 0 nongenic -2273 upstream Y41C4A.6 1943 CB6648_redo III 11694298 1 C A 230 1.00 63 62 0 14 14 @aAAaAaaaaAAaaA point 0 nongenic 577 downstream Y41C4A.4a 1943 CB6648_redo III 11694298 1 C A 230 1.00 63 62 0 14 14 @aAAaAaaaaAAaaA point 0 nongenic 580 downstream Y41C4A.4e 1944 CB6648_redo III 11809758 1 T C 255 1.00 63 62 1 18 19 @cCccccccc,cccCCcCCc point 0 nongenic -121 upstream C18D11.6 1944 CB6648_redo III 11809758 1 T C 255 1.00 63 62 1 18 19 @cCccccccc,cccCCcCCc point 0 nongenic 313 downstream C18D11.9 1945 CB6648_redo III 11861725 1 A T 255 1.00 63 62 0 24 24 @TttTtTtttTtTTttTTtTtTTtt point 0 nongenic 408 into Y56A3A.2 1945 CB6648_redo III 11861725 1 A T 255 1.00 63 62 0 24 24 @TttTtTtttTtTTttTTtTtTTtt point 0 nongenic 564 downstream Y56A3A.4 1949 CB6648_redo III 11996058 1 A C 3 1.12 63 0 2 7 9 @CC,CCC,Cc point 0 nongenic 3278 into Y56A3A.32.2 1949 CB6648_redo III 11996058 1 A C 3 1.12 63 0 2 7 9 @CC,CCC,Cc point 0 nongenic 3418 into Y56A3A.32.1 1950 CB6648_redo III 12008909 1 C G 255 4.25 63 62 0 34 34 @GGgGGGGgGGGGGgggGgggGGGGGGGGgGGggG point 0 nongenic -11521 upstream Y79H2A.1a.1 1950 CB6648_redo III 12008909 1 C G 255 4.25 63 62 0 34 34 @GGgGGGGgGGGGGgggGgggGGGGGGGGgGGggG point 0 nongenic -6075 upstream Y56A3A.33 1952 CB6648_redo III 12060765 1 T A 255 1.00 63 62 0 22 22 @aaAAAAaAaAAAaAaaaaaaAa point 0 SNP none haw48229 1953 CB6648_redo III 12103249 1 G T 119 1.00 63 62 5 11 16 @tTtttttTttT...,, point 0 missense CAC->AAC[His->Asn] Y75B8A.3 1955 CB6648_redo III 12215131 1 A T 255 1.00 63 62 0 54 54 @ttttttttTttttttttTttttttTtTttTtttTttTtTTTTTTtttTttTttt point 0 SNP none haw48426 1956 CB6648_redo III 12239827 1 G A 151 4.94 63 62 0 16 16 @aaAAaAaaaaAAAaaa point 0 nongenic 421 downstream Y75B8A.22.1 1956 CB6648_redo III 12239827 1 G A 151 4.94 63 62 0 16 16 @aaAAaAaaaaAAAaaa point 0 nongenic 457 downstream Y75B8A.22.2 1956 CB6648_redo III 12239827 1 G A 151 4.94 63 62 0 16 16 @aaAAaAaaaaAAAaaa point 0 nongenic 728 downstream Y75B8A.21 160831 CB6648_redo III 12337673 311 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2036 to 2347 bp into Y75B8A.35a.1 160831 CB6648_redo III 12337673 311 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 884 to 1195 bp into Y75B8A.35a.3,Y75B8A.35b 160831 CB6648_redo III 12337673 311 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 886 to 1197 bp into Y75B8A.35a.2 1963 CB6648_redo III 12405696 1 T C 61 1.00 63 8 1 11 12 @.ccccccccccc point 0 silent GGA->GGG[Gly->Gly] Y49E10.11a,Y49E10.11b,Y49E10.11c 1964 CB6648_redo III 12511900 1 A G 29 3.44 19 28 0 11 11 @GGGGGGGGGGG point 0 ncRNA none Y111B2A.5b 1965 CB6648_redo III 12573264 1 G C 225 1.44 63 62 0 14 14 @CCCCCCCCCCCCcc point 0 SNP none haw49035 1966 CB6648_redo III 12583126 1 A G 255 1.00 63 62 0 20 20 @gGGGgGGgGGGggGGggGgg point 0 SNP none haw49061 1967 CB6648_redo III 12589042 1 T C 255 1.00 63 62 0 42 42 @cCCCCcccccccccCccCcCcCCccCccCCccccCCcCcCcC point 0 nongenic -13793 upstream Y111B2A.9a 1968 CB6648_redo III 12596781 1 T A 255 1.25 63 62 0 22 22 @AaaaAaaAaAAaAAAAAAAAAA point 0 nongenic -21532 upstream Y111B2A.9a 1968 CB6648_redo III 12596781 1 T A 255 1.25 63 62 0 22 22 @AaaaAaaAaAAaAAAAAAAAAA point 0 nongenic 755 into Y111B2A.10a,Y111B2A.10b.3 1968 CB6648_redo III 12596781 1 T A 255 1.25 63 62 0 22 22 @AaaaAaaAaAAaAAAAAAAAAA point 0 nongenic 843 into Y111B2A.10b.2 1968 CB6648_redo III 12596781 1 T A 255 1.25 63 62 0 22 22 @AaaaAaaAaAAaAAAAAAAAAA point 0 nongenic 880 into Y111B2A.10b.1 1969 CB6648_redo III 12603549 1 G T 53 1.75 63 32 0 4 4 @TTTT point 0 nongenic -5056 upstream Y111B2A.10b.1 1969 CB6648_redo III 12603549 1 G T 53 1.75 63 32 0 4 4 @TTTT point 0 nongenic -5621 upstream Y111B2A.12 1969 CB6648_redo III 12603549 1 G T 53 1.75 63 32 0 4 4 @TTTT point 0 nongenic 4364 into Y111B2A.11 1973 CB6648_redo III 12636079 1 T C 255 1.00 63 62 0 14 14 @CCcCCCCcccCcCc point 0 nongenic 9623 into Y111B2A.14.2 1973 CB6648_redo III 12636079 1 T C 255 1.00 63 62 0 14 14 @CCcCCCCcccCcCc point 0 nongenic 9628 into Y111B2A.14.1 1974 CB6648_redo III 12672105 1 G A 77 1.00 63 6 3 6 9 @.,.aaAaaa point 0 nongenic -1453 upstream Y111B2A.17 1974 CB6648_redo III 12672105 1 G A 77 1.00 63 6 3 6 9 @.,.aaAaaa point 0 nongenic -9953 upstream Y111B2A.15 1974 CB6648_redo III 12672105 1 G A 77 1.00 63 6 3 6 9 @.,.aaAaaa point 0 nongenic 830 into Y111B2A.16 1975 CB6648_redo III 12679326 1 G A 136 2.00 63 62 0 16 16 @aaaaaaaaaaaaaaaa point 0 nongenic -6020 upstream Y111B2A.16 1975 CB6648_redo III 12679326 1 G A 136 2.00 63 62 0 16 16 @aaaaaaaaaaaaaaaa point 0 nongenic 5768 into Y111B2A.17 1976 CB6648_redo III 12679350 1 A T 204 1.62 63 62 0 11 11 @ttttttttttt point 0 nongenic -6044 upstream Y111B2A.16 1976 CB6648_redo III 12679350 1 A T 204 1.62 63 62 0 11 11 @ttttttttttt point 0 nongenic 5792 into Y111B2A.17 1977 CB6648_redo III 12679354 1 G T 207 1.62 63 62 0 11 11 @ttttttttttt point 0 nongenic -6048 upstream Y111B2A.16 1977 CB6648_redo III 12679354 1 G T 207 1.62 63 62 0 11 11 @ttttttttttt point 0 nongenic 5796 into Y111B2A.17 1978 CB6648_redo III 12679386 1 A G 109 1.00 63 62 0 4 4 @gggg point 0 nongenic -6080 upstream Y111B2A.16 1978 CB6648_redo III 12679386 1 A G 109 1.00 63 62 0 4 4 @gggg point 0 nongenic 5828 into Y111B2A.17 1979 CB6648_redo III 12683449 1 A C 255 1.00 63 62 0 52 52 @ccccccCCCcCCccccCcccCCcCcCcCcCCccCcCCCCcCCCCCCcccCCc point 0 SNP none haw49231 1980 CB6648_redo III 12705127 1 T A 27 1.81 63 0 0 5 5 @AaaAA point 0 nongenic -6314 upstream Y111B2A.20 1980 CB6648_redo III 12705127 1 T A 27 1.81 63 0 0 5 5 @AaaAA point 0 nongenic 5316 into Y111B2A.24 1987 CB6648_redo III 12725512 1 A T 255 1.19 63 62 0 17 17 @TtTtTttTTTtTTTTtt point 0 nongenic -20820 upstream Y111B2A.21 1987 CB6648_redo III 12725512 1 A T 255 1.19 63 62 0 17 17 @TtTtTttTTTtTTTTtt point 0 nongenic 11065 into Y111B2A.22 1988 CB6648_redo III 12953211 1 T G 255 1.00 63 62 0 30 30 @GGGggGgggGggggggggggGggggggggg point 0 missense AAT->ACT[Asn->Thr] Y39E4A.2a,Y39E4A.2b 1988 CB6648_redo III 12953211 1 T G 255 1.00 63 62 0 30 30 @GGGggGgggGggggggggggGggggggggg point 0 SNP none snp_Y39E4A[3] 1996 CB6648_redo III 13032359 1 T C 59 1.69 63 14 3 3 6 @.C,,Cc point 0 nongenic -2812 upstream F14F7.4 1996 CB6648_redo III 13032359 1 T C 59 1.69 63 14 3 3 6 @.C,,Cc point 0 nongenic -7622 upstream F54F12.2a 1996 CB6648_redo III 13032359 1 T C 59 1.69 63 14 3 3 6 @.C,,Cc point 0 nongenic 1558 into F14F7.5 1997 CB6648_redo III 13032361 1 T C 19 8.88 63 58 0 8 8 @cCCCAcCc point 0 nongenic -2814 upstream F14F7.4 1997 CB6648_redo III 13032361 1 T C 19 8.88 63 58 0 8 8 @cCCCAcCc point 0 nongenic -7620 upstream F54F12.2a 1997 CB6648_redo III 13032361 1 T C 19 8.88 63 58 0 8 8 @cCCCAcCc point 0 nongenic 1560 into F14F7.5 2000 CB6648_redo III 13032431 1 T C 88 2.00 63 62 0 7 7 @CcCCCcC point 0 nongenic -2884 upstream F14F7.4 2000 CB6648_redo III 13032431 1 T C 88 2.00 63 62 0 7 7 @CcCCCcC point 0 nongenic -7550 upstream F54F12.2a 2000 CB6648_redo III 13032431 1 T C 88 2.00 63 62 0 7 7 @CcCCCcC point 0 nongenic 1630 into F14F7.5 2001 CB6648_redo III 13032541 1 G C 123 1.19 63 62 0 13 13 @CCCCCcCCCcccC point 0 nongenic -2994 upstream F14F7.4 2001 CB6648_redo III 13032541 1 G C 123 1.19 63 62 0 13 13 @CCCCCcCCCcccC point 0 nongenic -7440 upstream F54F12.2a 2001 CB6648_redo III 13032541 1 G C 123 1.19 63 62 0 13 13 @CCCCCcCCCcccC point 0 nongenic 1740 into F14F7.5 2002 CB6648_redo III 13032550 1 T C 60 1.31 63 40 1 7 8 @cCCCcc.C point 0 nongenic -3003 upstream F14F7.4 2002 CB6648_redo III 13032550 1 T C 60 1.31 63 40 1 7 8 @cCCCcc.C point 0 nongenic -7431 upstream F54F12.2a 2002 CB6648_redo III 13032550 1 T C 60 1.31 63 40 1 7 8 @cCCCcc.C point 0 nongenic 1749 into F14F7.5 2004 CB6648_redo III 13155781 1 G A 255 1.00 63 62 0 26 26 @AAaAaaAAAAaAAAaAAaAaAaAAaa point 0 SNP none haw49837 2005 CB6648_redo III 13202983 1 G T 255 5.31 63 62 0 19 19 @TTTTTtttttttTTtTttt point 0 nongenic -1880 upstream Y39E4B.11 2005 CB6648_redo III 13202983 1 G T 255 5.31 63 62 0 19 19 @TTTTTtttttttTTtTttt point 0 nongenic 1788 into Y39E4B.12b 2005 CB6648_redo III 13202983 1 G T 255 5.31 63 62 0 19 19 @TTTTTtttttttTTtTttt point 0 nongenic 1790 into Y39E4B.12a.1,Y39E4B.12a.2 2005 CB6648_redo III 13202983 1 G T 255 5.31 63 62 0 19 19 @TTTTTtttttttTTtTttt point 0 nongenic 1794 into Y39E4B.12c 2006 CB6648_redo III 13264546 1 C A 255 1.25 63 62 0 21 21 @aaaAAAaAAaAAAAAAAAAAA point 0 nongenic -1206 upstream F56A8.5 2006 CB6648_redo III 13264546 1 C A 255 1.25 63 62 0 21 21 @aaaAAAaAAaAAAAAAAAAAA point 0 nongenic 307 into F56A8.4 2007 CB6648_redo III 13264548 1 T A 255 1.12 63 62 0 20 20 @aAAAaAAaAAAAAAAAAAAA point 0 nongenic -1204 upstream F56A8.5 2007 CB6648_redo III 13264548 1 T A 255 1.12 63 62 0 20 20 @aAAAaAAaAAAAAAAAAAAA point 0 nongenic 305 into F56A8.4 2008 CB6648_redo III 13265024 1 A T 255 1.00 63 62 0 35 35 @ttTTtTTTTTTTTTtTTTTTTTttTTtTTtTTTtT point 0 nongenic -728 upstream F56A8.5 2008 CB6648_redo III 13265024 1 A T 255 1.00 63 62 0 35 35 @ttTTtTTTTTTTTTtTTTTTTTttTTtTTtTTTtT point 0 nongenic 171 downstream F56A8.4 2009 CB6648_redo III 13281779 1 A G 255 1.00 63 62 0 36 36 @GggggGggggggGgGgGggGgGgGGGGGGGGgGgGg point 0 SNP none haw49884 2013 CB6648_redo III 13533517 1 A G 3 5.38 0 20 6 17 23 @.GG.GGGGGGGG.G.G.GGG.GG point 0 nongenic -9541 upstream Y76A2B.1 2013 CB6648_redo III 13533517 1 A G 3 5.38 0 20 6 17 23 @.GG.GGGGGGGG.G.G.GGG.GG point 0 nongenic 6198 into Y76A2B.2 2014 CB6648_redo III 13536222 1 T A 142 1.00 63 46 1 6 7 @AaAaAA. point 0 nongenic -12246 upstream Y76A2B.1 2014 CB6648_redo III 13536222 1 T A 142 1.00 63 46 1 6 7 @AaAaAA. point 0 nongenic 3613 into Y76A2B.2 2015 CB6648_redo III 13536225 1 T C 46 1.00 63 62 2 4 6 @,,cccc point 0 nongenic -12249 upstream Y76A2B.1 2015 CB6648_redo III 13536225 1 T C 46 1.00 63 62 2 4 6 @,,cccc point 0 nongenic 3610 into Y76A2B.2 2016 CB6648_redo III 13536226 1 C A 107 1.00 63 46 0 6 6 @TTaaaa point 0 nongenic -12250 upstream Y76A2B.1 2016 CB6648_redo III 13536226 1 C A 107 1.00 63 46 0 6 6 @TTaaaa point 0 nongenic 3609 into Y76A2B.2 2034 CB6648_redo III 13750753 1 T C 255 5.38 63 62 0 21 21 @cCcccCcccCCcCcCcccccC point 0 nongenic -1597 upstream K08E3.10 2034 CB6648_redo III 13750753 1 T C 255 5.38 63 62 0 21 21 @cCcccCcccCCcCcCcccccC point 0 nongenic -2184 upstream K08E3.2 2037 CB6648_redo IV 149978 1 A G 255 1.00 63 62 0 42 42 @GgGGgGGgggGgGgggGgGGGgggGGgGGGGGGgGggGgggG point 0 SNP none haw50079 2041 CB6648_redo IV 495583 1 T G 255 1.00 63 62 0 34 34 @GGgGggGGgGGgGGGgGggggGggGGgGggGggG point 0 SNP none haw50110 4465 CB6648_redo IV 659197 0 X X -1000 -999.99 -1000 -1000 3 1 4 @,,.aa indel 2 nongenic -6326 upstream K11H12.7.1 4465 CB6648_redo IV 659197 0 X X -1000 -999.99 -1000 -1000 3 1 4 @,,.aa indel 2 nongenic 601 downstream K11H12.8b 4465 CB6648_redo IV 659197 0 X X -1000 -999.99 -1000 -1000 3 1 4 @,,.aa indel 2 nongenic 609 downstream K11H12.8a 2044 CB6648_redo IV 743294 1 A G 255 1.00 63 62 0 33 33 @GGGggGGGggggggggGGgGGGgGggGggGgGg point 0 nongenic -6572 upstream Y55F3C.3b 2044 CB6648_redo IV 743294 1 A G 255 1.00 63 62 0 33 33 @GGGggGGGggggggggGGgGGGgGggGggGgGg point 0 nongenic 1212 into Y55F3C.3a 2045 CB6648_redo IV 757658 1 T A 255 1.00 63 62 1 50 51 @AAaAAAaaAaaaaaAAaAAAaacaaaAa.AaAaaaAAaaaaaAaaaAAAaa point 0 missense TTC->TAC[Phe->Tyr] Y55F3C.2 2046 CB6648_redo IV 807998 1 T C 255 1.00 63 62 0 65 65 @CCCCCCCCCCccCcCCCcCCCCccccccCcccCCcccCCcCccccCCcccccCcCCcCCCCcccc point 0 SNP none haw50174 2047 CB6648_redo IV 976182 1 T C 255 1.00 63 62 0 27 27 @CCCcCCcCcccccCCcCcccCcCCCCC point 0 SNP none haw50433 2048 CB6648_redo IV 976984 1 A G 255 1.00 63 62 0 18 18 @gGgGgGgggggGgggGGG point 0 SNP none haw50435 2049 CB6648_redo IV 991371 1 G C 255 1.06 63 62 0 36 36 @cccccccccccCcccccCCccccccCcCCCCcCCCC point 0 nongenic -917 upstream Y55F3AM.6a,Y55F3AM.6b 2049 CB6648_redo IV 991371 1 G C 255 1.06 63 62 0 36 36 @cccccccccccCcccccCCccccccCcCCCCcCCCC point 0 nongenic -931 upstream Y55F3AM.7 2063 CB6648_redo IV 1197597 1 G T 255 1.00 63 62 0 88 88 @TTTTTtttTTTTTTtTttTtttttTtTTTtTTTTTtTTTTTttTTtTTttTTttTTtTTTTtTTTTtTTTTTttTTtTttTtttTTTt point 0 SNP none haw50776 2070 CB6648_redo IV 1386027 1 A G 255 1.00 63 62 0 34 34 @ggGGggGgggGggggGggGGGgGGgGGGgGGGGG point 0 nongenic -134 upstream Y104H12A.1 2070 CB6648_redo IV 1386027 1 A G 255 1.00 63 62 0 34 34 @ggGGggGgggGggggGggGGGgGGgGGGgGGGGG point 0 nongenic -9464 upstream F58F6.3 2071 CB6648_redo IV 1438459 1 A T 255 1.00 63 62 0 30 30 @ttTTtttTTttTtTtTtttTTttTTttttt point 0 missense TCC->ACC[Ser->Thr] Y77E11A.11.1,Y77E11A.11.2 2084 CB6648_redo IV 1695528 1 G C 255 1.00 63 62 0 42 42 @cCCcccccCCCCCCCcCcCCcCccCccCCCCCCcCCcccCCc point 0 nongenic -13370 upstream Y41D4B.24 2084 CB6648_redo IV 1695528 1 G C 255 1.00 63 62 0 42 42 @cCCcccccCCCCCCCcCcCCcCccCccCCCCCCcCCcccCCc point 0 nongenic -4368 upstream K08D12.5 4470 CB6648_redo IV 1726632 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @,,,.TTtT indel 0 nongenic -2490 upstream K08D12.7 2085 CB6648_redo IV 1812233 1 A G 99 7.56 63 62 0 35 35 @ggggGgGggggGgggggggGGGgggGGgggggggg point 0 nongenic -8252 upstream Y38C1BA.1 2085 CB6648_redo IV 1812233 1 A G 99 7.56 63 62 0 35 35 @ggggGgGggggGgggggggGGGgggGGgggggggg point 0 nongenic 2865 into Y38C1BA.2a,Y38C1BA.2b 160836 CB6648_redo IV 1823720 1264 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered 806 bp upstream to codon 36 (10 % of 349 codons) K07A9.2 2092 CB6648_redo IV 1907215 1 T C 85 1.00 63 42 0 4 4 @CCCC point 0 nongenic -6237 upstream F55A8.1.2 2092 CB6648_redo IV 1907215 1 T C 85 1.00 63 42 0 4 4 @CCCC point 0 nongenic 4894 into F55A8.1.1 2093 CB6648_redo IV 1907218 1 T C 42 1.00 63 30 0 4 4 @CCCC point 0 nongenic -6234 upstream F55A8.1.2 2093 CB6648_redo IV 1907218 1 T C 42 1.00 63 30 0 4 4 @CCCC point 0 nongenic 4897 into F55A8.1.1 2094 CB6648_redo IV 1917013 1 A C 255 1.00 63 62 0 15 15 @CccCCCCccCCCCcc point 0 SNP none haw51958 160837 CB6648_redo IV 1932355 214 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 8785 to 8999 bp into F52C12.4 160838 CB6648_redo IV 1951226 57 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3029 to 3086 bp into F52C12.3 2106 CB6648_redo IV 1971408 1 A G 82 1.00 63 62 3 7 10 @ggggggg,,, point 0 nongenic -2296 upstream Y76B12C.3 2106 CB6648_redo IV 1971408 1 A G 82 1.00 63 62 3 7 10 @ggggggg,,, point 0 nongenic 640 into Y76B12C.4 2107 CB6648_redo IV 2022963 1 C T 10 1.00 63 20 2 3 5 @ttt,, point 0 nongenic 10029 into Y76B12C.7 2108 CB6648_redo IV 2024663 1 C T 61 1.69 63 4 2 2 4 @tt,. point 0 nongenic 8329 into Y76B12C.7 2109 CB6648_redo IV 2024665 1 A C 4 1.69 63 6 0 4 4 @cCtt point 0 nongenic 8327 into Y76B12C.7 2110 CB6648_redo IV 2024666 1 T C 7 1.50 63 4 0 4 4 @Accc point 0 nongenic 8326 into Y76B12C.7 2111 CB6648_redo IV 2024667 1 C G 28 1.50 63 4 0 8 8 @TgggGGGG point 0 nongenic 8325 into Y76B12C.7 2112 CB6648_redo IV 2024668 1 G A 28 1.50 63 4 0 8 8 @CaaaAAAA point 0 nongenic 8324 into Y76B12C.7 2114 CB6648_redo IV 2106939 1 A C 35 1.19 63 62 3 8 11 @G.CCCCcC,,g point 0 nongenic -7049 upstream C23H5.11 2114 CB6648_redo IV 2106939 1 A C 35 1.19 63 62 3 8 11 @G.CCCCcC,,g point 0 nongenic 2885 into C23H5.7 2115 CB6648_redo IV 2130505 1 A T 255 1.00 63 62 0 55 55 @TtttTTttTTttTttttTtTTttTTtttTtTtttttttttTtTTttttttttTtT point 0 SNP none haw52294 2116 CB6648_redo IV 2226862 1 T C 255 1.69 63 62 0 22 22 @CCCCCccccCcCCCCcCCCcCc point 0 nongenic 4034 into T04C4.1a,T04C4.1b.2 2116 CB6648_redo IV 2226862 1 T C 255 1.69 63 62 0 22 22 @CCCCCccccCcCCCCcCCCcCc point 0 nongenic 4036 into T04C4.1b.1 2119 CB6648_redo IV 2357212 1 G T 255 1.00 63 62 0 40 40 @TtTCTttTTttTtTTtttttttTtTtttttttTttttTTt point 0 SNP none haw52736 2120 CB6648_redo IV 2359440 1 A G 255 1.00 63 62 0 23 23 @ggGggGGgGGGggggggGGGGgg point 0 SNP none haw52752 2124 CB6648_redo IV 2365373 1 T A 66 1.19 63 62 10 15 25 @,.,.,.,,,,AAAAaAAAaAAaaAA point 0 nongenic -13089 upstream Y38F2AR.13 2124 CB6648_redo IV 2365373 1 T A 66 1.19 63 62 10 15 25 @,.,.,.,,,,AAAAaAAAaAAaaAA point 0 nongenic 6444 into Y38F2AR.5 2125 CB6648_redo IV 2365375 1 A T 188 1.19 63 62 7 20 27 @,.,.,,T,TTTTtTTTtTTttTTTTTT point 0 nongenic -13087 upstream Y38F2AR.13 2125 CB6648_redo IV 2365375 1 A T 188 1.19 63 62 7 20 27 @,.,.,,T,TTTTtTTTtTTttTTTTTT point 0 nongenic 6446 into Y38F2AR.5 2126 CB6648_redo IV 2373373 1 T C 255 2.50 63 62 0 30 30 @cCccCCCCccCcCcCcccCcCCccCCcCCC point 0 nongenic -5089 upstream Y38F2AR.13 2126 CB6648_redo IV 2373373 1 T C 255 2.50 63 62 0 30 30 @cCccCCCCccCcCcCcccCcCCccCCcCCC point 0 nongenic 2742 into Y38F2AR.5 2129 CB6648_redo IV 2502956 1 A G 183 2.56 63 62 0 26 26 @ggGgGGggGgGgGGGggGgGgGGGgg point 0 nongenic -1368 upstream Y69A2AR.16 2129 CB6648_redo IV 2502956 1 A G 183 2.56 63 62 0 26 26 @ggGgGGggGgGgGGGggGgGgGGGgg point 0 nongenic 905 downstream Y69A2AR.17 2131 CB6648_redo IV 2519843 1 T A 114 1.00 63 62 0 4 4 @AAaa point 0 nongenic -11931 upstream Y69A2AR.22 2131 CB6648_redo IV 2519843 1 T A 114 1.00 63 62 0 4 4 @AAaa point 0 nongenic -22479 upstream Y69A2AR.15 2131 CB6648_redo IV 2519843 1 T A 114 1.00 63 62 0 4 4 @AAaa point 0 nongenic 10444 into Y69A2AR.16 2132 CB6648_redo IV 2519844 1 T A 108 1.00 63 62 0 4 4 @AAaa point 0 nongenic -11932 upstream Y69A2AR.22 2132 CB6648_redo IV 2519844 1 T A 108 1.00 63 62 0 4 4 @AAaa point 0 nongenic -22478 upstream Y69A2AR.15 2132 CB6648_redo IV 2519844 1 T A 108 1.00 63 62 0 4 4 @AAaa point 0 nongenic 10443 into Y69A2AR.16 2133 CB6648_redo IV 2544993 1 A T 255 1.00 63 62 0 22 22 @TtTTtTtTTtttTtTTTTTtTT point 0 nongenic 2671 into Y69A2AR.15 2136 CB6648_redo IV 2629533 1 T G 12 1.00 63 56 1 5 6 @GGGGG, point 0 nongenic -1305 upstream Y69A2AR.29 2138 CB6648_redo IV 2905125 1 A G 89 4.19 63 62 0 6 6 @GgGGgg point 0 nongenic -13604 upstream Y54G2A.50 2138 CB6648_redo IV 2905125 1 A G 89 4.19 63 62 0 6 6 @GgGGgg point 0 nongenic 2782 into Y54G2A.21 2139 CB6648_redo IV 2999123 1 A G 255 1.00 63 62 0 17 17 @GGGGggGGGGggGGggG point 0 silent CCT->CCC[Pro->Pro] Y54G2A.27 2142 CB6648_redo IV 3206809 1 G A 31 7.81 36 16 0 6 6 @AAAaAa point 0 nongenic -6958 upstream M4.1 2142 CB6648_redo IV 3206809 1 G A 31 7.81 36 16 0 6 6 @AAAaAa point 0 nongenic 2256 into M4.2 2150 CB6648_redo IV 3372547 1 A T 255 1.00 63 62 0 33 33 @TtTtTtTtttTTTtTTTTTtTTTTTTTTttTtt point 0 silent GTA->GTT[Val->Val] Y55H10A.1 2151 CB6648_redo IV 3525903 1 T A 255 1.00 63 62 0 28 28 @aaaaaaaaaaaaaaaaaaAaaAAaaaaa point 0 three_prime_UTR none Y37E11C.1 2152 CB6648_redo IV 3679598 1 A G 18 1.00 63 62 5 6 11 @,.,.,gggggg point 0 nongenic -10899 upstream Y37E11AL.6 2154 CB6648_redo IV 3824608 1 C A 44 1.00 63 20 5 9 14 @,.,,,aaAaAaAaa point 0 nongenic -2258 upstream F28F9.3 2154 CB6648_redo IV 3824608 1 C A 44 1.00 63 20 5 9 14 @,.,,,aaAaAaAaa point 0 nongenic -5289 upstream M02B7.5 2160 CB6648_redo IV 4166340 1 A T 255 1.06 63 62 0 45 45 @tTtTtTTtTTTttttttttttTTtTtTTTttttTtttttTtTttT point 0 nongenic -1690 upstream K08D10.5 2160 CB6648_redo IV 4166340 1 A T 255 1.06 63 62 0 45 45 @tTtTtTTtTTTttttttttttTTtTtTTTttttTtttttTtTttT point 0 nongenic 170 downstream K08D10.7.1,K08D10.7.2 2170 CB6648_redo IV 4821642 1 A G 11 1.00 63 62 4 7 11 @,..,ggGggGg point 0 nongenic -520 upstream H06H21.8a 2170 CB6648_redo IV 4821642 1 A G 11 1.00 63 62 4 7 11 @,..,ggGggGg point 0 nongenic -577 upstream H06H21.8b 2176 CB6648_redo IV 4931163 1 A C 255 1.00 63 62 0 47 47 @cccCCCCCCCCCccCcCcCCCcCCCCccccccccccCcCccccCcCC point 0 missense AAC->CAC[Asn->His] Y9C9A.8 2176 CB6648_redo IV 4931163 1 A C 255 1.00 63 62 0 47 47 @cccCCCCCCCCCccCcCcCCCcCCCCccccccccccCcCccccCcCC point 0 SNP none haw56120,snp_Y9C9A[1] 2177 CB6648_redo IV 4972666 1 C T 255 1.00 63 62 0 48 48 @TttTtttTtTTTttTttttTtTtttTtttTttttttTtttttttTttt point 0 missense GTT->ATT[Val->Ile] Y9C9A.15 2177 CB6648_redo IV 4972666 1 C T 255 1.00 63 62 0 48 48 @TttTtttTtTTTttTttttTtTtttTtttTttttttTtttttttTttt point 0 SNP none haw56128 2179 CB6648_redo IV 5308471 1 A C 255 1.00 63 62 0 40 40 @CcCcCcCCCcCCCccCcCcCCcCCCCcCCCcCCCCccCCc point 0 nongenic -1751 upstream ZK354.3 2179 CB6648_redo IV 5308471 1 A C 255 1.00 63 62 0 40 40 @CcCcCcCCCcCCCccCcCcCCcCCCCcCCCcCCCCccCCc point 0 nongenic -99 upstream ZK354.9 2180 CB6648_redo IV 5426794 1 G T 255 1.00 63 62 0 40 40 @ttTTtttTTtttTTTTtTTTttttttTTttTttttTTttt point 0 SNP none haw56297 2184 CB6648_redo IV 5609149 1 T A 31 1.00 63 62 5 6 11 @AAaaAA,.... point 0 nongenic -244 upstream F26D12.1d 2184 CB6648_redo IV 5609149 1 T A 31 1.00 63 62 5 6 11 @AAaaAA,.... point 0 nongenic -35052 upstream T12E12.6 2184 CB6648_redo IV 5609149 1 T A 31 1.00 63 62 5 6 11 @AAaaAA,.... point 0 nongenic 1201 into F26D12.1a 2184 CB6648_redo IV 5609149 1 T A 31 1.00 63 62 5 6 11 @AAaaAA,.... point 0 nongenic 466 into F26D12.1b,F26D12.1c 4490 CB6648_redo IV 5706864 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @,,....gg indel 2 nongenic -217 upstream C55C3.2 4490 CB6648_redo IV 5706864 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @,,....gg indel 2 nongenic -3410 upstream C55C3.5 2189 CB6648_redo IV 6359838 1 A G 36 9.44 63 62 27 42 69 @,gGG,.GGGGgGG.GG,GG..GGG,G.GGGGG,,GGgGGG.,gG,.G,GG.g,Gg,g.g,gg,G,,,.. point 0 nongenic -12374 upstream Y73B6BL.16 2189 CB6648_redo IV 6359838 1 A G 36 9.44 63 62 27 42 69 @,gGG,.GGGGgGG.GG,GG..GGG,G.GGGGG,,GGgGGG.,gG,.G,GG.g,Gg,g.g,gg,G,,,.. point 0 nongenic -2201 upstream Y73B6BL.47 2190 CB6648_redo IV 6359857 1 A C 14 9.50 40 36 18 23 41 @Cc,cCCcC,CCcc,Cc,ccc,cc,C,,,cgg,,,,,,,.g, point 0 nongenic -12393 upstream Y73B6BL.16 2190 CB6648_redo IV 6359857 1 A C 14 9.50 40 36 18 23 41 @Cc,cCCcC,CCcc,Cc,ccc,cc,C,,,cgg,,,,,,,.g, point 0 nongenic -2182 upstream Y73B6BL.47 2205 CB6648_redo IV 7053273 1 C T 36 1.00 63 20 0 4 4 @TttT point 0 missense CCT->CTT[Pro->Leu] C06G3.1a.1,C06G3.1a.2,C06G3.1b 2209 CB6648_redo IV 7056612 1 A G 255 1.00 63 62 0 36 36 @GggGGGgGGGGGgggGGGgGGgGGgGGgGgGGgggG point 0 SNP none haw57660 2210 CB6648_redo IV 7066275 1 T C 4 1.00 63 2 3 7 10 @,CCCCCc,,c point 0 nongenic -6118 upstream Y43B11AR.5 2210 CB6648_redo IV 7066275 1 T C 4 1.00 63 2 3 7 10 @,CCCCCc,,c point 0 nongenic 896 into Y43B11AL.1 2215 CB6648_redo IV 7226681 1 C T 18 1.00 63 62 1 4 5 @.tttt point 0 nongenic -74 upstream R13A1.10 2215 CB6648_redo IV 7226681 1 C T 18 1.00 63 62 1 4 5 @.tttt point 0 nongenic 585 downstream D2024.5b.1 2215 CB6648_redo IV 7226681 1 C T 18 1.00 63 62 1 4 5 @.tttt point 0 nongenic 586 downstream D2024.5a.1 2216 CB6648_redo IV 7278032 1 C G 146 1.12 63 62 0 7 7 @ggGGGGG point 0 nongenic -14811 upstream C06E4.7 2216 CB6648_redo IV 7278032 1 C G 146 1.12 63 62 0 7 7 @ggGGGGG point 0 nongenic -4243 upstream C06E4.2 2217 CB6648_redo IV 7527069 1 T G 255 1.00 63 62 0 41 41 @ggGGGgGGgGGGgGGGGgGGgGgggGgGGggGGGGGgGgGG point 0 SNP none haw57987 2218 CB6648_redo IV 7591627 1 A C 144 9.56 63 62 4 23 27 @CccCcCCcCcccCcccccc,,,cccc, point 0 missense GAA->GAC[Glu->Asp] Y2C2A.1 2224 CB6648_redo IV 7596465 1 T A 15 1.00 0 14 0 7 7 @aaaaaaa point 0 nongenic -9999 upstream F45E4.4 2224 CB6648_redo IV 7596465 1 T A 15 1.00 0 14 0 7 7 @aaaaaaa point 0 nongenic 5921 into Y2C2A.1 2225 CB6648_redo IV 7596476 1 G T 13 1.00 0 6 0 5 5 @ttttt point 0 nongenic -9988 upstream F45E4.4 2225 CB6648_redo IV 7596476 1 G T 13 1.00 0 6 0 5 5 @ttttt point 0 nongenic 5932 into Y2C2A.1 2226 CB6648_redo IV 7596529 1 G C 3 1.00 0 16 1 11 12 @ccccccccccc. point 0 nongenic -9935 upstream F45E4.4 2226 CB6648_redo IV 7596529 1 G C 3 1.00 0 16 1 11 12 @ccccccccccc. point 0 nongenic 5985 into Y2C2A.1 2227 CB6648_redo IV 7596545 1 T A 39 1.00 32 38 0 13 13 @aaaaaaaaaaaaa point 0 nongenic -9919 upstream F45E4.4 2227 CB6648_redo IV 7596545 1 T A 39 1.00 32 38 0 13 13 @aaaaaaaaaaaaa point 0 nongenic 6001 into Y2C2A.1 2228 CB6648_redo IV 7596564 1 G T 40 1.00 32 38 0 4 4 @tttt point 0 nongenic -9900 upstream F45E4.4 2228 CB6648_redo IV 7596564 1 G T 40 1.00 32 38 0 4 4 @tttt point 0 nongenic 6020 into Y2C2A.1 160842 CB6648_redo IV 7596582 50 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 6037 to 6087 bp into Y2C2A.1 2230 CB6648_redo IV 7597178 1 T A 21 3.25 0 20 0 9 9 @AAaAAaAAA point 0 nongenic -9286 upstream F45E4.4 2230 CB6648_redo IV 7597178 1 T A 21 3.25 0 20 0 9 9 @AAaAAaAAA point 0 nongenic 6634 into Y2C2A.1 160843 CB6648_redo IV 7598923 68 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered codon 2626 to codon 2630 (0 % of 4901 codons) Y2C2A.1 2245 CB6648_redo IV 7600485 1 A T 255 1.00 63 62 0 44 44 @TtttTTtTTTTTtttTTTttTTtTTTtTTttttttttttttTTt point 0 missense CAA->CAT[Gln->His] Y2C2A.1 2245 CB6648_redo IV 7600485 1 A T 255 1.00 63 62 0 44 44 @TtttTTtTTTTTtttTTTttTTtTTTtTTttttttttttttTTt point 0 SNP none haw58035 2246 CB6648_redo IV 7607350 1 A G 255 2.88 63 62 0 25 25 @gGGgggGGGGGggGGGGGgGGGgGG point 0 nongenic -12263 upstream F45E4.3b.1 2246 CB6648_redo IV 7607350 1 A G 255 2.88 63 62 0 25 25 @gGGgggGGGGGggGGGGGgGGGgGG point 0 nongenic 886 into F45E4.4 2247 CB6648_redo IV 7607351 1 A G 255 2.88 63 62 0 25 25 @gGGgggGGGGGggGGGGGgGGGgGG point 0 nongenic -12262 upstream F45E4.3b.1 2247 CB6648_redo IV 7607351 1 A G 255 2.88 63 62 0 25 25 @gGGgggGGGGGggGGGGGgGGGgGG point 0 nongenic 887 into F45E4.4 2248 CB6648_redo IV 7607353 1 A G 255 2.88 63 62 0 24 24 @GGgggGGGGGggGGGGGgGGGgGG point 0 nongenic -12260 upstream F45E4.3b.1 2248 CB6648_redo IV 7607353 1 A G 255 2.88 63 62 0 24 24 @GGgggGGGGGggGGGGGgGGGgGG point 0 nongenic 889 into F45E4.4 2249 CB6648_redo IV 7703023 1 G C 16 3.00 0 16 0 5 5 @CCCcc point 0 nongenic -4670 upstream F33D4.3 2249 CB6648_redo IV 7703023 1 G C 16 3.00 0 16 0 5 5 @CCCcc point 0 nongenic 848 downstream F33D4.4.1 2251 CB6648_redo IV 8012779 1 C A 208 1.00 63 62 0 8 8 @AAAaaaaa point 0 nongenic -1330 upstream C26B2.8 2251 CB6648_redo IV 8012779 1 C A 208 1.00 63 62 0 8 8 @AAAaaaaa point 0 nongenic -366 upstream Y42H9B.3 2252 CB6648_redo IV 8015831 1 G C 206 9.56 63 62 0 12 12 @cccccccccccc point 0 nongenic -363 upstream C26B2.7 2252 CB6648_redo IV 8015831 1 G C 206 9.56 63 62 0 12 12 @cccccccccccc point 0 nongenic 211 downstream C26B2.8 4498 CB6648_redo IV 8061990 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @,,.,,Cc indel 0 nongenic -660 upstream C18F3.2b,C18F3.2c 4499 CB6648_redo IV 8087154 0 X X -1000 -999.99 -1000 -1000 5 0 5 @.,.,.AAa indel 0 nongenic -12745 upstream Y42H9AR.2 4499 CB6648_redo IV 8087154 0 X X -1000 -999.99 -1000 -1000 5 0 5 @.,.,.AAa indel 0 nongenic -520 upstream C18F3.4 2259 CB6648_redo IV 8468403 1 C T 255 5.56 63 62 0 22 22 @TtTTTTttttttTtTTtTtttT point 0 nongenic -5677 upstream C28C12.11b 2259 CB6648_redo IV 8468403 1 C T 255 5.56 63 62 0 22 22 @TtTTTTttttttTtTTtTtttT point 0 nongenic -8143 upstream T01B11.4 2259 CB6648_redo IV 8468403 1 C T 255 5.56 63 62 0 22 22 @TtTTTTttttttTtTTtTtttT point 0 nongenic 3570 into T01B11.7.2 2259 CB6648_redo IV 8468403 1 C T 255 5.56 63 62 0 22 22 @TtTTTTttttttTtTTtTtttT point 0 nongenic 3654 into T01B11.7.1 2283 CB6648_redo IV 8575147 1 A C 14 6.62 0 2 0 103 103 @CCCCCccCCCcCCCCcCCCCccCcCCCCCCCCCCCcCCccCccCCCcccccccCcCCCccccCCccCCccCcCCCcCcCCCcccCCccCcccccccccc point 0 nongenic -10376 upstream Y59H11AR.2a.2 2302 CB6648_redo IV 8602902 1 C A 255 1.00 63 62 0 40 40 @aaaAAaaaAaaAaaaaaAaaaaaAaAAaaAaaAAAaaaaA point 0 SNP none haw58423 2303 CB6648_redo IV 8602934 1 C A 255 1.00 63 62 0 37 37 @AAaaAaaAAAaaaaAaaAAaaAaAAaaAAAAaaAAaa point 0 SNP none haw58424 2304 CB6648_redo IV 8719811 1 A G 14 1.00 63 62 5 9 14 @GGGG,GGGg,,g,, point 0 nongenic -4188 upstream F21D5.9.1 2304 CB6648_redo IV 8719811 1 A G 14 1.00 63 62 5 9 14 @GGGG,GGGg,,g,, point 0 nongenic 580 into H23L24.1 2305 CB6648_redo IV 9038439 1 G A 255 1.00 63 62 0 32 32 @AAaAaAaaAAAaaaaaaaAAaAAaAaaaAAaA point 0 SNP none haw58542 2310 CB6648_redo IV 9048306 1 A G 255 6.12 63 62 32 223 255 @GGGGGGGGGGGGGGgggggggggggGGGGGGGGGGGGGGggGGGGGGGGGGGGGGGGGggggGGGGGGGGGGGGGGGGGGGGGGgggggggGGGGGGGG point 0 SNP none haw58549 2312 CB6648_redo IV 9048807 1 C G 255 1.00 63 62 0 17 17 @gggGGGGgGgGGgggGg point 0 nongenic -21182 upstream ZC410.1a 2312 CB6648_redo IV 9048807 1 C G 255 1.00 63 62 0 17 17 @gggGGGGgGgGGgggGg point 0 nongenic -3474 upstream Y73F4A.1 2313 CB6648_redo IV 9048812 1 T A 255 1.00 63 62 0 17 17 @AAAAaAaAAaaaAaAaa point 0 nongenic -21177 upstream ZC410.1a 2313 CB6648_redo IV 9048812 1 T A 255 1.00 63 62 0 17 17 @AAAAaAaAAaaaAaAaa point 0 nongenic -3479 upstream Y73F4A.1 2318 CB6648_redo IV 9155021 1 A T 94 1.00 63 62 0 9 9 @ttttTtttt point 0 SNP none haw58572 4507 CB6648_redo IV 9195667 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @,.,cCc indel 0 inframe none C46C2.7 2319 CB6648_redo IV 9251676 1 C T 13 1.00 63 42 6 8 14 @,,..,.tTtTtttt point 0 nongenic 350 into Y11D7A.8 2319 CB6648_redo IV 9251676 1 C T 13 1.00 63 42 6 8 14 @,,..,.tTtTtttt point 0 nongenic 836 downstream Y11D7A.7 2320 CB6648_redo IV 9269038 1 T C 255 1.00 63 62 0 40 40 @CCCCCccccCCcCccCcCCccCcccCCCCCcCCcccCcCC point 0 nongenic -1035 upstream Y11D7A.13 2320 CB6648_redo IV 9269038 1 T C 255 1.00 63 62 0 40 40 @CCCCCccccCCcCccCcCCccCcccCCCCCcCCcccCcCC point 0 nongenic -2498 upstream Y11D7A.19 2321 CB6648_redo IV 9370614 1 T G 97 1.00 63 62 5 10 15 @..,,,gGggggGGgg point 0 nongenic -4130 upstream C10C5.1 2321 CB6648_redo IV 9370614 1 T G 97 1.00 63 62 5 10 15 @..,,,gGggggGGgg point 0 nongenic -870 upstream C10C5.2 2327 CB6648_redo IV 9538140 1 G A 68 1.00 63 62 1 4 5 @.AAAA point 0 nongenic -2642 upstream F56H11.1a.1 2327 CB6648_redo IV 9538140 1 G A 68 1.00 63 62 1 4 5 @.AAAA point 0 nongenic -5021 upstream F56H11.2a 4509 CB6648_redo IV 9715774 2 X X -1000 -999.99 -1000 -1000 9 -6 3 @,.,,..... indel -2 SNP none uCE4-1082 2328 CB6648_redo IV 9745669 1 G A 255 1.44 63 62 0 33 33 @aaAAaaaaAAAAAaAaAaaaaAAaaaaaaaaaA point 0 missense CAC->TAC[His->Tyr] C28D4.5 4510 CB6648_redo IV 9755286 0 X X -1000 -999.99 -1000 -1000 2 0 2 @.,Tt indel 0 nongenic -2336 upstream H27C11.1a,H27C11.1b.2 4510 CB6648_redo IV 9755286 0 X X -1000 -999.99 -1000 -1000 2 0 2 @.,Tt indel 0 nongenic -6868 upstream C28D4.8 2329 CB6648_redo IV 9764971 1 G T 13 1.62 63 0 0 8 8 @TtTtttCc point 0 nongenic 506 downstream H27C11.1a 2329 CB6648_redo IV 9764971 1 G T 13 1.62 63 0 0 8 8 @TtTtttCc point 0 nongenic 676 downstream T13F2.12 4512 CB6648_redo IV 9840851 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,.CCc indel 0 five_prime_UTR none K07F5.4b 4512 CB6648_redo IV 9840851 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,.CCc indel 0 inframe none K07F5.4a 4514 CB6648_redo IV 10112497 3 X X -1000 -999.99 -1000 -1000 2 0 2 @,. indel -3 SNP none uCE4-1092 4515 CB6648_redo IV 10329614 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,,TTt indel 0 nongenic -1243 downstream K11E8.1i.1 4515 CB6648_redo IV 10329614 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,,TTt indel 0 nongenic -137 downstream K11E8.1n 4515 CB6648_redo IV 10329614 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,,TTt indel 0 nongenic -1501 downstream K11E8.1m 4515 CB6648_redo IV 10329614 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,,TTt indel 0 nongenic -1519 downstream K11E8.1o 4515 CB6648_redo IV 10329614 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,,TTt indel 0 nongenic -1942 downstream K11E8.1k.2 4515 CB6648_redo IV 10329614 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,,TTt indel 0 nongenic -2186 downstream K11E8.1a 4515 CB6648_redo IV 10329614 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,,TTt indel 0 nongenic -462 downstream K11E8.1l.2 4515 CB6648_redo IV 10329614 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,,TTt indel 0 nongenic -4647 downstream K11E8.1c.1,K11E8.1c.2,K11E8.1d.2,K11E8.1e.1,K11E8.1e.2,K11E8.1f.1,K11E8.1f.2,K11E8.1g.1,K11E8.1g.2,K11E8.1h.1,K11E8.1h.2,K11E8.1p 4515 CB6648_redo IV 10329614 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,,TTt indel 0 nongenic -5373 downstream K11E8.1d.1,K11E8.1k.1,K11E8.1l.1 4515 CB6648_redo IV 10329614 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,,TTt indel 0 nongenic -557 downstream K11E8.1i.2 4515 CB6648_redo IV 10329614 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,,TTt indel 0 nongenic -8490 upstream R09E10.1.2 2334 CB6648_redo IV 10409487 1 C A 24 1.00 63 62 4 5 9 @,.,.AaaaA point 0 nongenic -37 upstream R10H10.6 2334 CB6648_redo IV 10409487 1 C A 24 1.00 63 62 4 5 9 @,.,.AaaaA point 0 nongenic 470 downstream R10H10.7.1 2334 CB6648_redo IV 10409487 1 C A 24 1.00 63 62 4 5 9 @,.,.AaaaA point 0 nongenic 542 downstream R10H10.7.2 2335 CB6648_redo IV 10425373 1 T G 118 1.00 63 50 0 6 6 @Gggggg point 0 nongenic -763 upstream F13B12.1.1 2335 CB6648_redo IV 10425373 1 T G 118 1.00 63 50 0 6 6 @Gggggg point 0 nongenic -765 upstream F13B12.1.2 2335 CB6648_redo IV 10425373 1 T G 118 1.00 63 50 0 6 6 @Gggggg point 0 nongenic 837 downstream F13B12.2 2336 CB6648_redo IV 10425374 1 G T 64 1.00 63 50 3 4 7 @tttt.,. point 0 nongenic -764 upstream F13B12.1.1 2336 CB6648_redo IV 10425374 1 G T 64 1.00 63 50 3 4 7 @tttt.,. point 0 nongenic -766 upstream F13B12.1.2 2336 CB6648_redo IV 10425374 1 G T 64 1.00 63 50 3 4 7 @tttt.,. point 0 nongenic 836 downstream F13B12.2 2337 CB6648_redo IV 10848627 1 T C 45 1.44 63 32 3 4 7 @,,,cccc point 0 nongenic -3735 upstream T11G6.7 2338 CB6648_redo IV 10878679 1 G A 255 1.00 63 62 0 43 43 @AAAAaaaaaAAAaaaaAAAAAaAAaaaAaAAaaAAaAAAAAAA point 0 missense CGT->TGT[Arg->Cys] F13E9.6 2338 CB6648_redo IV 10878679 1 G A 255 1.00 63 62 0 43 43 @AAAAaaaaaAAAaaaaAAAAAaAAaaaAaAAaaAAaAAAAAAA point 0 SNP none haw59179 2344 CB6648_redo IV 10950263 1 A C 72 1.31 63 62 37 70 107 @.CC.CCCcCcc,Cc,CCc..,C..C,,C,CCCcc.c,CC,c,,cc,ccc,cCcccCcc,CCccC,,,CC,CCC,c,C..cCcc..cCC,cCc.,.cCcC point 0 missense AAG->ACG[Lys->Thr] Y69E1A.2 2344 CB6648_redo IV 10950263 1 A C 72 1.31 63 62 37 70 107 @.CC.CCCcCcc,Cc,CCc..,C..C,,C,CCCcc.c,CC,c,,cc,ccc,cCcccCcc,CCccC,,,CC,CCC,c,C..cCcc..cCC,cCc.,.cCcC point 0 SNP none uCE4-1129 2345 CB6648_redo IV 10950264 1 G A 72 1.31 63 62 37 71 108 @AA.AAAaAaa,Aa,AAa..,A..A,,A,AAAaa.a,AA,a,,aa,aaa,aAaaaAaa,AAaaA,,,AA,AAA,a,A..aAaa..aAA,aAa.,.aAaAa point 0 silent AAG->AAA[Lys->Lys] Y69E1A.2 2345 CB6648_redo IV 10950264 1 G A 72 1.31 63 62 37 71 108 @AA.AAAaAaa,Aa,AAa..,A..A,,A,AAAaa.a,AA,a,,aa,aaa,aAaaaAaa,AAaaA,,,AA,AAA,a,A..aAaa..aAA,aAa.,.aAaAa point 0 SNP none uCE4-1130 2346 CB6648_redo IV 10950402 1 G A 21 1.00 63 62 48 62 110 @,,,aaaaaaaa.A,A,aaAa...c.AAAa,AA,aAA,,,aA,.,,,.,,,AA,a.a.Aa,,.aa.aA,AAAAA,a.A,a,.aaA,,aAaA,Aa,,,aaA point 0 silent GGG->GGA[Gly->Gly] Y69E1A.2 2346 CB6648_redo IV 10950402 1 G A 21 1.00 63 62 48 62 110 @,,,aaaaaaaa.A,A,aaAa...c.AAAa,AA,aAA,,,aA,.,,,.,,,AA,a.a.Aa,,.aa.aA,AAAAA,a.A,a,.aaA,,aAaA,Aa,,,aaA point 0 SNP none uCE4-1131 2347 CB6648_redo IV 10984634 1 T C 99 1.00 63 62 20 27 47 @CcCcC,CcCC,C,C,,cC,c,c,,,C,,c,ccCC,CCC..cc,.,,c point 0 three_prime_UTR none Y43E12A.2 2348 CB6648_redo IV 10997631 1 A G 11 8.31 63 22 1 3 4 @,ggg point 0 nongenic -4457 upstream F13H10.9 2350 CB6648_redo IV 11009137 1 G A 255 1.00 63 62 0 27 27 @aaAaaaAaAAAaaAaaaaaAAaAaAAa point 0 nongenic -126 upstream F13H10.6 2350 CB6648_redo IV 11009137 1 G A 255 1.00 63 62 0 27 27 @aaAaaaAaAAAaaAaaaaaAAaAaAAa point 0 nongenic 862 downstream F13H10.2a 2351 CB6648_redo IV 11071114 1 C T 225 2.88 63 62 687 -432 255 @TTTT,TT,,,TT,TTTTT,T,TTTTt.ttt.TTTTT,T,TTTTTTTT,T,,TTTTTTTTTTT,TTT,Tt.t.ttt..t.tTT,T,,T,TT,TTTT,,,, point 0 nongenic 884 downstream Y5F2A.3 2352 CB6648_redo IV 11071123 1 T C 255 1.56 63 62 2 253 255 @CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc point 0 SNP none haw59203 2353 CB6648_redo IV 11071124 1 T A 112 1.56 63 62 428 -173 255 @,,,,,,,,,,,,A,,,,,,,,,,A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,.............,,,,,,,,,,,A,,,,,,,,,,,,,,, point 0 nongenic 894 downstream Y5F2A.3 4522 CB6648_redo IV 11075254 0 X X -1000 -999.99 -1000 -1000 13 2 15 @,,,C,,,,,,,C,,,ccccc indel 1 nongenic 813 downstream Y5F2A.4 4523 CB6648_redo IV 11179024 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @.,,,,aa indel 0 nongenic -457 upstream C08F8.9 4523 CB6648_redo IV 11179024 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @.,,,,aa indel 0 nongenic -590 upstream R07H5.2a.1 4523 CB6648_redo IV 11179024 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @.,,,,aa indel 0 nongenic -592 upstream R07H5.2a.2,R07H5.2b 4523 CB6648_redo IV 11179024 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @.,,,,aa indel 0 nongenic 974 downstream C08F8.7 2376 CB6648_redo IV 11180495 1 A G 255 1.00 63 62 0 39 39 @gggGggggggggGgGggGggGggggGggGGgGgGGgGgG point 0 missense ATT->GTT[Ile->Val] R07H5.2a.1,R07H5.2a.2,R07H5.2b 2376 CB6648_redo IV 11180495 1 A G 255 1.00 63 62 0 39 39 @gggGggggggggGgGggGggGggggGggGGgGgGGgGgG point 0 SNP none haw59219 2377 CB6648_redo IV 11226241 1 A C 208 2.19 63 62 0 21 21 @CCcCcCcccCcCCCccccCCc point 0 missense CAA->CCA[Gln->Pro] C29F4.1 2378 CB6648_redo IV 11323988 1 C G 45 1.75 63 62 3 6 9 @GGGgGG... point 0 three_prime_UTR none B0035.7 2379 CB6648_redo IV 11551952 1 A G 18 1.00 63 62 3 6 9 @GggGgG.,, point 0 nongenic -21 upstream F12F6.9 2380 CB6648_redo IV 11581824 1 C A 255 1.00 63 62 0 38 38 @aAAaaAAAaaAAaaaAAaaaaAaAAAaaAaAaAaAAAa point 0 missense GAC->GAA[Asp->Glu] F12F6.3.1,F12F6.3.2,F12F6.3.3 2389 CB6648_redo IV 12069459 1 G A 255 1.00 63 62 0 30 30 @aAAAaAaAaaaaaaaaaAaAaaaAaaaaaa point 0 SNP none haw59564 2390 CB6648_redo IV 12105545 1 A T 255 1.00 63 62 0 47 47 @TtttTTtttttttTTTTtTTtTtTTtTTTtTTTtttTTTtTTtttTT point 0 three_prime_UTR none F11A10.4 2392 CB6648_redo IV 12239969 1 A C 255 1.62 63 62 0 13 13 @CCCCCcccCCCcc point 0 nongenic -1048 upstream Y39C12A.6 2393 CB6648_redo IV 12239976 1 C T 184 2.31 63 62 2 7 9 @ttTTTtt., point 0 nongenic -1055 upstream Y39C12A.6 2394 CB6648_redo IV 12239978 1 A G 99 2.81 63 62 2 6 8 @GGGggc,, point 0 nongenic -1057 upstream Y39C12A.6 2396 CB6648_redo IV 12248644 1 A G 82 3.44 50 62 0 14 14 @ggGgggGgGgggGg point 0 nongenic -3876 upstream Y39C12A.7 2410 CB6648_redo IV 12334254 1 C A 255 1.00 63 62 0 37 37 @AAaAaAaaAaaaAaAAaaAAAaAaAaaaaaAAAAAAa point 0 nongenic -3294 upstream F19B6.4 2410 CB6648_redo IV 12334254 1 C A 255 1.00 63 62 0 37 37 @AAaAaAaaAaaaAaAAaaAAAaAaAaaaaaAAAAAAa point 0 nongenic -3393 upstream F19B6.2a 2410 CB6648_redo IV 12334254 1 C A 255 1.00 63 62 0 37 37 @AAaAaAaaAaaaAaAAaaAAAaAaAaaaaaAAAAAAa point 0 nongenic 316 into F19B6.1a,F19B6.1b 2411 CB6648_redo IV 12334255 1 C A 255 1.00 63 62 0 38 38 @AAaAaAaaAaaaAaAAaaAAAaAaAaaaaaAAAAAAaA point 0 nongenic -3293 upstream F19B6.4 2411 CB6648_redo IV 12334255 1 C A 255 1.00 63 62 0 38 38 @AAaAaAaaAaaaAaAAaaAAAaAaAaaaaaAAAAAAaA point 0 nongenic -3394 upstream F19B6.2a 2411 CB6648_redo IV 12334255 1 C A 255 1.00 63 62 0 38 38 @AAaAaAaaAaaaAaAAaaAAAaAaAaaaaaAAAAAAaA point 0 nongenic 315 into F19B6.1a,F19B6.1b 4529 CB6648_redo IV 12336928 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @,,,..gg indel 0 nongenic -2358 upstream F19B6.1a,F19B6.1b 4529 CB6648_redo IV 12336928 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @,,,..gg indel 0 nongenic -621 upstream F19B6.4 2414 CB6648_redo IV 12393525 1 C A 255 1.00 63 62 0 40 40 @AAaAAAaAAAaAAaaAAAaAAAAAAAAAaAaaAaaAaAAA point 0 missense ATG->ATT[Met->Ile] F28D1.9 2414 CB6648_redo IV 12393525 1 C A 255 1.00 63 62 0 40 40 @AAaAAAaAAAaAAaaAAAaAAAAAAAAAaAaaAaaAaAAA point 0 SNP none haw59770 2415 CB6648_redo IV 12430402 1 A T 204 9.88 63 62 0 16 16 @tttttttttttttttc point 0 nongenic -1917 upstream F08G5.4 2415 CB6648_redo IV 12430402 1 A T 204 9.88 63 62 0 16 16 @tttttttttttttttc point 0 nongenic -2205 upstream F08G5.7 2415 CB6648_redo IV 12430402 1 A T 204 9.88 63 62 0 16 16 @tttttttttttttttc point 0 nongenic 2078 into F08G5.5.2 2415 CB6648_redo IV 12430402 1 A T 204 9.88 63 62 0 16 16 @tttttttttttttttc point 0 nongenic 2091 into F08G5.5.1 2419 CB6648_redo IV 12430471 1 C G 183 1.81 63 62 0 6 6 @gggggG point 0 nongenic -1986 upstream F08G5.4 2419 CB6648_redo IV 12430471 1 C G 183 1.81 63 62 0 6 6 @gggggG point 0 nongenic -2136 upstream F08G5.7 2419 CB6648_redo IV 12430471 1 C G 183 1.81 63 62 0 6 6 @gggggG point 0 nongenic 2009 into F08G5.5.2 2419 CB6648_redo IV 12430471 1 C G 183 1.81 63 62 0 6 6 @gggggG point 0 nongenic 2022 into F08G5.5.1 2420 CB6648_redo IV 12430475 1 G C 255 2.31 63 62 0 10 10 @cccccCccCC point 0 nongenic -1990 upstream F08G5.4 2420 CB6648_redo IV 12430475 1 G C 255 2.31 63 62 0 10 10 @cccccCccCC point 0 nongenic -2132 upstream F08G5.7 2420 CB6648_redo IV 12430475 1 G C 255 2.31 63 62 0 10 10 @cccccCccCC point 0 nongenic 2005 into F08G5.5.2 2420 CB6648_redo IV 12430475 1 G C 255 2.31 63 62 0 10 10 @cccccCccCC point 0 nongenic 2018 into F08G5.5.1 2421 CB6648_redo IV 12430477 1 A G 255 2.31 63 62 0 10 10 @gggggGggGG point 0 nongenic -1992 upstream F08G5.4 2421 CB6648_redo IV 12430477 1 A G 255 2.31 63 62 0 10 10 @gggggGggGG point 0 nongenic -2130 upstream F08G5.7 2421 CB6648_redo IV 12430477 1 A G 255 2.31 63 62 0 10 10 @gggggGggGG point 0 nongenic 2003 into F08G5.5.2 2421 CB6648_redo IV 12430477 1 A G 255 2.31 63 62 0 10 10 @gggggGggGG point 0 nongenic 2016 into F08G5.5.1 2422 CB6648_redo IV 12430533 1 C T 255 6.19 63 62 0 46 46 @tttttTtttttttTTTTtttTTtTTTttTtTtTTTttttTtttttT point 0 nongenic -2048 upstream F08G5.4 2422 CB6648_redo IV 12430533 1 C T 255 6.19 63 62 0 46 46 @tttttTtttttttTTTTtttTTtTTTttTtTtTTTttttTtttttT point 0 nongenic -2074 upstream F08G5.7 2422 CB6648_redo IV 12430533 1 C T 255 6.19 63 62 0 46 46 @tttttTtttttttTTTTtttTTtTTTttTtTtTTTttttTtttttT point 0 nongenic 1947 into F08G5.5.2 2422 CB6648_redo IV 12430533 1 C T 255 6.19 63 62 0 46 46 @tttttTtttttttTTTTtttTTtTTTttTtTtTTTttttTtttttT point 0 nongenic 1960 into F08G5.5.1 4535 CB6648_redo IV 12544080 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,,,aAa indel 1 nongenic -12967 upstream F53B2.5 4535 CB6648_redo IV 12544080 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,,,aAa indel 1 nongenic -1614 downstream F53B2.6 4535 CB6648_redo IV 12544080 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,,,aAa indel 1 nongenic -4021 upstream ZK795.1 2425 CB6648_redo IV 12544081 1 A T 5 1.00 63 48 0 5 5 @CCtTt point 0 nongenic -12968 upstream F53B2.5 2425 CB6648_redo IV 12544081 1 A T 5 1.00 63 48 0 5 5 @CCtTt point 0 nongenic -4019 upstream ZK795.1 2425 CB6648_redo IV 12544081 1 A T 5 1.00 63 48 0 5 5 @CCtTt point 0 nongenic 1613 into F53B2.6 2426 CB6648_redo IV 12545902 1 C T 255 1.00 63 62 0 52 52 @TTttTTtttTTTTTTTTTTtTtTTTtttTttttTttttTtTTttTTtTtTtt point 0 SNP none haw59832 2427 CB6648_redo IV 12571922 1 A G 61 1.00 63 62 3 5 8 @,.,GGGGg point 0 nongenic -1415 upstream K08E7.5c 2427 CB6648_redo IV 12571922 1 A G 61 1.00 63 62 3 5 8 @,.,GGGGg point 0 nongenic -731 upstream K08E7.4 2428 CB6648_redo IV 12581671 1 C T 255 1.00 63 62 0 35 35 @tTtttttttttTttTtttTTTTttTTtttttTttt point 0 SNP none haw59843 2430 CB6648_redo IV 12697437 1 G C 255 1.00 63 62 0 44 44 @ACCCccCCccCCCccCCcCCCCCCCccccCCCCCCcccCCCCCc point 0 SNP none haw59886 2431 CB6648_redo IV 12730473 1 A G 203 5.44 63 62 3 9 12 @ggGgggGGG,,, point 0 SNP none haw59889 2437 CB6648_redo IV 12781072 1 A C 253 1.00 63 62 0 20 20 @ccCcCcgCCCCCCCCCCgcC point 0 nongenic -23429 upstream C36H8.3.1 2437 CB6648_redo IV 12781072 1 A C 253 1.00 63 62 0 20 20 @ccCcCcgCCCCCCCCCCgcC point 0 nongenic -7953 upstream F07C6.3 2437 CB6648_redo IV 12781072 1 A C 253 1.00 63 62 0 20 20 @ccCcCcgCCCCCCCCCCgcC point 0 nongenic 5870 into ZK897.1 2439 CB6648_redo IV 12979116 1 T C 255 1.00 63 62 0 46 46 @CcCCCccCcCCCCCccCCCcccCCCccCCCCCCccccCccCCCccC point 0 SNP none haw60243 2440 CB6648_redo IV 13092702 1 G C 255 1.00 63 62 0 55 55 @CCCCCcCCcCCCCCCCCCCCcCCCccccCCcaCCCCCcCCCCccCCCCcCCcCcc point 0 nongenic -1272 upstream C39E9.12.1,C39E9.12.2 2440 CB6648_redo IV 13092702 1 G C 255 1.00 63 62 0 55 55 @CCCCCcCCcCCCCCCCCCCCcCCCccccCCcaCCCCCcCCCCccCCCCcCCcCcc point 0 nongenic -1666 upstream C39E9.9 2440 CB6648_redo IV 13092702 1 G C 255 1.00 63 62 0 55 55 @CCCCCcCCcCCCCCCCCCCCcCCCccccCCcaCCCCCcCCCCccCCCCcCCcCcc point 0 nongenic 1111 into C39E9.11 2441 CB6648_redo IV 13127459 1 T C 255 1.00 63 62 0 30 30 @cCCCccCCcccccCccCCcCCCCCcCcCcc point 0 SNP none haw60403 2443 CB6648_redo IV 13386538 1 G A 255 1.00 63 62 0 28 28 @aAaAaAAAaAAAaaaAaaAaaAaAaAaA point 0 five_prime_UTR none Y62E10A.11.1,Y62E10A.11.2,Y62E10A.11.3 2444 CB6648_redo IV 13451972 1 T C 255 1.00 63 62 0 64 64 @cCcCcCCCCCCCCCCcCCccCcCcccCcCCcCccCcccCcCCCcCccccCcCCccCccCcCccC point 0 SNP none haw60794 2446 CB6648_redo IV 13463712 1 G C 18 1.00 63 2 1 9 10 @CCCCCCCCC, point 0 nongenic -2393 upstream Y38H8A.5 2447 CB6648_redo IV 13463714 1 G C 3 1.00 63 2 4 7 11 @CCCCC,CC,,, point 0 nongenic -2391 upstream Y38H8A.5 2448 CB6648_redo IV 13463717 1 T C 3 1.00 63 0 2 8 10 @CCCCCCC,C, point 0 nongenic -2388 upstream Y38H8A.5 2450 CB6648_redo IV 13490388 1 A C 87 1.00 63 62 5 10 15 @.,...cCCCcCCccC point 0 nongenic -2149 upstream Y45F10A.7a 2450 CB6648_redo IV 13490388 1 A C 87 1.00 63 62 5 10 15 @.,...cCCCcCCccC point 0 nongenic 12425 into Y45F10A.6a,Y45F10A.6b,Y45F10A.6c 2451 CB6648_redo IV 13549411 1 T A 176 1.88 63 62 24 231 255 @,..,,.,.,,.,,...,.,,.AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA point 0 nongenic -1211 upstream F52G2.3.1 2451 CB6648_redo IV 13549411 1 T A 176 1.88 63 62 24 231 255 @,..,,.,.,,.,,...,.,,.AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA point 0 nongenic 209 downstream Y45F10B.13b 2451 CB6648_redo IV 13549411 1 T A 176 1.88 63 62 24 231 255 @,..,,.,.,,.,,...,.,,.AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA point 0 nongenic 317 downstream Y45F10B.13a,Y45F10B.13c 2453 CB6648_redo IV 13563245 1 G C 255 1.00 63 62 0 48 48 @cCCCCCcccCCCCCCcCCCcCCCccCCCCcCcCCccCcccCCccccCc point 0 SNP none haw60948 2454 CB6648_redo IV 13563393 1 G T 255 1.00 63 62 0 29 29 @ttTTTtTTttttTTTttTttttttTTTtT point 0 SNP none haw60949 2455 CB6648_redo IV 13602476 1 T A 255 1.00 63 62 0 48 48 @AAaaaAAaaAaAAaAAaAaAAaAaAAAAAaaaaaAAaAAAaAAAaAaa point 0 SNP none haw60978 2456 CB6648_redo IV 13662115 1 T G 255 1.00 63 62 0 36 36 @ggGGgGgGGgGggGggGggGgggGgGggGGgGgGGG point 0 SNP none haw61075 2456 CB6648_redo IV 13662115 1 T G 255 1.00 63 62 0 36 36 @ggGGgGgGGgGggGggGggGgggGgGggGGgGgGGG point 0 three_prime_UTR none Y45F10C.2 2458 CB6648_redo IV 13695677 1 C G 255 1.00 63 62 0 31 31 @gGGGGGGgGgGggGggGGGgGGGGGgGGGgg point 0 nongenic -6914 upstream T23G4.2 2459 CB6648_redo IV 13695678 1 G C 255 1.00 63 62 0 34 34 @CCCCCCcCcCccCccCCCcCCCCCcCCCacCCcc point 0 nongenic -6915 upstream T23G4.2 4542 CB6648_redo IV 13791000 0 X X -1000 -999.99 -1000 -1000 10 0 10 @.,,,,,,.,,ttt indel 0 inframe none Y45F10D.7 2462 CB6648_redo IV 13791001 1 C G 64 1.00 63 6 5 10 15 @gGGGGGGgGG...,. point 0 missense CCG->CGG[Pro->Arg] Y45F10D.7 2463 CB6648_redo IV 13793476 1 A C 255 1.00 63 62 0 20 20 @cCCccCCCCCCCccCCCCcc point 0 nongenic -4787 upstream Y45F10D.9 2463 CB6648_redo IV 13793476 1 A C 255 1.00 63 62 0 20 20 @cCCccCCCCCCCccCCCCcc point 0 nongenic 2715 into Y45F10D.7 2466 CB6648_redo IV 13838595 1 G A 255 1.00 63 62 0 27 27 @AaAAAAaAAaaaaaAAaaaAaaaaaaa point 0 nongenic -15726 upstream B0513.6 2466 CB6648_redo IV 13838595 1 G A 255 1.00 63 62 0 27 27 @AaAAAAaAAaaaaaAAaaaAaaaaaaa point 0 nongenic -2237 upstream H08M01.1 2466 CB6648_redo IV 13838595 1 G A 255 1.00 63 62 0 27 27 @AaAAAAaAAaaaaaAAaaaAaaaaaaa point 0 nongenic 6085 into H08M01.2a 2466 CB6648_redo IV 13838595 1 G A 255 1.00 63 62 0 27 27 @AaAAAAaAAaaaaaAAaaaAaaaaaaa point 0 nongenic 6351 into H08M01.2b 2467 CB6648_redo IV 13910050 1 C T 4 7.88 0 4 5 10 15 @t,tT,tTT,TtT.t. point 0 nongenic -24361 upstream Y37A1A.4 2467 CB6648_redo IV 13910050 1 C T 4 7.88 0 4 5 10 15 @t,tT,tTT,TtT.t. point 0 nongenic -7210 upstream Y37A1A.3 2467 CB6648_redo IV 13910050 1 C T 4 7.88 0 4 5 10 15 @t,tT,tTT,TtT.t. point 0 nongenic 2215 into Y37A1A.2 2468 CB6648_redo IV 13923107 1 C A 17 8.19 27 40 3 3 6 @,,A.aa point 0 nongenic -10842 upstream Y37A1A.2 2468 CB6648_redo IV 13923107 1 C A 17 8.19 27 40 3 3 6 @,,A.aa point 0 nongenic -11304 upstream Y37A1A.4 2479 CB6648_redo IV 14313679 1 T G 127 1.00 63 62 2 6 8 @GggGGG., point 0 nongenic 5851 into Y64G10A.7 2480 CB6648_redo IV 14347514 1 C A 255 1.00 63 62 0 51 51 @AAAaAaAaAaaaaaaAaAaaaaaaAaAaaaAAAaaaaAAAaaAaaaAaaAa point 0 SNP none haw62226 2482 CB6648_redo IV 14662594 1 T A 63 1.00 63 52 1 3 4 @,AAA point 0 nongenic -1041 upstream Y57G11C.37 2483 CB6648_redo IV 14670517 1 T G 55 1.00 63 40 1 3 4 @,GGG point 0 nongenic -12488 upstream Y57G11C.31 2483 CB6648_redo IV 14670517 1 T G 55 1.00 63 40 1 3 4 @,GGG point 0 nongenic 4586 into Y57G11C.37 2484 CB6648_redo IV 14691766 1 G A 255 1.00 63 62 0 52 52 @aAaaAaAaAAaAaAaaaaaAAAaaAAaaaAAaAAaaaAaaaaaaaaaaAaAa point 0 SNP none haw62984 2485 CB6648_redo IV 14992694 1 G T 255 1.00 63 62 0 33 33 @TTtttTTTTttttTtTTtTTTTtttTTTTttTt point 0 SNP none haw63537 2486 CB6648_redo IV 14998777 1 C T 255 1.00 63 62 0 19 19 @tTTTTTTTTttTTTtTTtt point 0 SNP none haw63554 2497 CB6648_redo IV 15313323 1 A T 255 1.00 63 62 0 53 53 @TtTTtTttttTttttTtTtttTTCtTTTttttttttttTTTtTttTttTTTtt point 0 SNP none haw64171 2500 CB6648_redo IV 15448957 1 A T 157 1.00 63 62 6 14 20 @ttTTtTTtTtTtTt.,.,.. point 0 nongenic -4415 upstream Y73F8A.23 2500 CB6648_redo IV 15448957 1 A T 157 1.00 63 62 6 14 20 @ttTTtTTtTtTtTt.,.,.. point 0 nongenic 3618 into Y73F8A.24 2503 CB6648_redo IV 15749705 1 A G 255 1.00 63 62 0 37 37 @GGggGgGgGggggGGgggGGGGggggggGgGggGGGG point 0 SNP none haw64925 4550 CB6648_redo IV 15798017 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @.,..Gg indel 1 nongenic 64 downstream Y105C5A.22 2510 CB6648_redo IV 15798018 1 T G 118 2.19 63 54 0 6 6 @GggGgg point 0 nongenic 62 downstream Y105C5A.22 2512 CB6648_redo IV 15871052 1 T G 255 1.00 63 62 0 23 23 @GGGggGGGggGGGGgggggGGgg point 0 missense TTG->TGG[Leu->Trp] Y105C5B.1 2512 CB6648_redo IV 15871052 1 T G 255 1.00 63 62 0 23 23 @GGGggGGGggGGGGgggggGGgg point 0 SNP none haw65169 2516 CB6648_redo IV 15925394 1 A T 255 1.00 63 62 0 26 26 @TtTTTtTtTTttTTtttttTTttTtt point 0 SNP none haw65323 2517 CB6648_redo IV 15935820 1 T C 255 1.00 63 62 0 52 52 @cccCcccCCCcCcCccCccccccCCCcCCcCCCccCccccCCCcCCCCCCCc point 0 SNP none haw65337 4551 CB6648_redo IV 15965558 2 X X -1000 -999.99 -1000 -1000 8 -7 1 @...,.... indel -2 frameshift none Y105C5B.18 4551 CB6648_redo IV 15965558 2 X X -1000 -999.99 -1000 -1000 8 -7 1 @...,.... indel -2 SNP none uCE4-1508 2518 CB6648_redo IV 16085619 1 C A 255 1.00 63 62 1 23 24 @AAaAaaaaaAAAAAaA.AaaaaAA point 0 SNP none haw65640 2520 CB6648_redo IV 16095879 1 T G 3 8.12 63 4 3 4 7 @GG.G,G. point 0 nongenic -36578 upstream Y105C5B.29 2521 CB6648_redo IV 16199503 1 T C 255 1.00 63 62 0 50 50 @cCcCcccCCCCccCCcCCCcCcCccCCCCcCCCccCCccccCCCCCCCcc point 0 silent CTT->CTC[Leu->Leu] Y7A9A.1 2527 CB6648_redo IV 16533636 1 T A 255 1.06 63 62 0 17 17 @AAAAAAAAaAAAAAAaA point 0 missense TTT->TTA[Phe->Leu] Y51H4A.6 2527 CB6648_redo IV 16533636 1 T A 255 1.06 63 62 0 17 17 @AAAAAAAAaAAAAAAaA point 0 SNP none haw66558 2531 CB6648_redo IV 16619813 1 C G 255 1.00 63 62 0 33 33 @GggggGgGggGGGGgGGGGgGGggGgGGgGGgg point 0 SNP none haw66710,snp_Y51H4A[11] 2533 CB6648_redo IV 16646588 1 T A 230 1.00 63 62 0 9 9 @aaaAaAaaa point 0 SNP none haw66770 2536 CB6648_redo IV 16760578 1 C T 255 1.25 63 62 0 38 38 @TttTTtTtTtTTtttTTtTTttTTTtttTTTtTtttTT point 0 SNP none haw66850 2537 CB6648_redo IV 16786381 1 G T 255 1.00 63 62 0 36 36 @ttTttTTTttTttTtTtTTtTTtTTTTTTttTTTTt point 0 SNP none haw66890 2538 CB6648_redo IV 16848870 1 A C 255 3.56 63 62 0 32 32 @cCCccCCCCCCCCCCccCCCccCCCcCcCCCC point 0 nongenic 1084 into Y116A8A.9.2 2538 CB6648_redo IV 16848870 1 A C 255 3.56 63 62 0 32 32 @cCCccCCCCCCCCCCccCCCccCCCcCcCCCC point 0 nongenic 430 into Y116A8A.9.3 2538 CB6648_redo IV 16848870 1 A C 255 3.56 63 62 0 32 32 @cCCccCCCCCCCCCCccCCCccCCCcCcCCCC point 0 nongenic 704 into Y116A8A.9.1 2543 CB6648_redo IV 16939349 1 T G 255 1.00 63 62 0 62 62 @GggGGgGGgGgggGGgGGgggGGGggggggGggGGGggGGGGGGGgGGgGGGGGGGGGGGGG point 0 SNP none haw67104 2544 CB6648_redo IV 16945230 1 A G 48 1.75 63 62 70 138 208 @GGg.g,GGGGGGGG,.gggG,,gGG.gGGGGGGgGGGGGgG,.ggg.,GGGG,G.,GG..G.GGG,.ggGGG..,,gggggGGGGggg.,.gG,..GGG point 0 nongenic -1854 upstream Y116A8C.12.1,Y116A8C.12.2 2544 CB6648_redo IV 16945230 1 A G 48 1.75 63 62 70 138 208 @GGg.g,GGGGGGGG,.gggG,,gGG.gGGGGGGgGGGGGgG,.ggg.,GGGG,G.,GG..G.GGG,.ggGGG..,,gggggGGGGggg.,.gG,..GGG point 0 nongenic -6161 upstream Y116A8C.10b.2 2544 CB6648_redo IV 16945230 1 A G 48 1.75 63 62 70 138 208 @GGg.g,GGGGGGGG,.gggG,,gGG.gGGGGGGgGGGGGgG,.ggg.,GGGG,G.,GG..G.GGG,.ggGGG..,,gggggGGGGggg.,.gG,..GGG point 0 nongenic 1583 into Y116A8C.9 2545 CB6648_redo IV 17011345 1 A C 3 2.00 63 58 4 14 18 @.cccc.ccc.cccc.ccc point 0 nongenic 3198 into Y116A8C.16b 2545 CB6648_redo IV 17011345 1 A C 3 2.00 63 58 4 14 18 @.cccc.ccc.cccc.ccc point 0 nongenic 3513 into Y116A8C.16a 2546 CB6648_redo IV 17011658 1 T G 29 2.00 63 24 1 16 17 @GGGGGGGGGGGGGGGG, point 0 nongenic 2885 into Y116A8C.16b 2546 CB6648_redo IV 17011658 1 T G 29 2.00 63 24 1 16 17 @GGGGGGGGGGGGGGGG, point 0 nongenic 3200 into Y116A8C.16a 2547 CB6648_redo IV 17086649 1 T C 255 1.00 63 62 0 39 39 @CcCCCccCcCCcCccCCcCCCCccccccCCccccccccC point 0 missense CAT->CGT[His->Arg] Y116A8C.26a 2548 CB6648_redo IV 17228760 1 T G 49 1.00 63 46 1 3 4 @.Ggg point 0 missense AAT->CAT[Asn->His] Y116A8B.5 2549 CB6648_redo IV 17228761 1 G C 47 1.00 63 48 1 3 4 @.Ccc point 0 premature_stop TAC->TAG[Tyr->stop] Y116A8B.5 2550 CB6648_redo IV 17340972 1 A T 255 1.00 63 62 0 57 57 @TtttTTTtttTTttttTTttTtTTtTTTTtttTttTTTtTttttttTTTtttTtTTt point 0 missense ATT->AAT[Ile->Asn] C49C3.9 2551 CB6648_redo IV 17491300 1 G A 255 1.00 63 62 0 70 70 @AaAAAaAAAaAAAAAAAAAAAAAAAAAAAaaAAAAaAAAAAAaaAAaAAAAAaAAaAAAAAaaaAaAAAa point 0 SNP none haw67744 2552 CB6648_redo IV 17491319 1 C T 255 1.00 63 62 0 61 61 @TTTTttTTTTtTTTTTTttTTtTTTTTtTTtTTTTTtttTtTTTtTTTtTTtTttTttTtt point 0 SNP none haw67745 3970 CB6648_redo MtDNA 5079 1 G A 255 1.00 63 62 0 255 255 @AAAAAAAAAAAAAAAAAAAAaaaaaaaaaaaaaaaaaAAAAAAAAAAAAAAAAAAAAAAAaaaaaaaaaaaaaAAAAAAAAAAAAAAAAAAAAAAAAAA point 0 silent GGG->GGA[Gly->Gly] MTCE.21 3971 CB6648_redo MtDNA 8429 1 A G 255 1.00 63 62 0 255 255 @GGGGGGGGGGGGGGGGGggggggggggggggggggGGGGGGGGGGGGGGGGGGGGGgggggggggggGGGGGGGGGGGGGGGGGGGGGGGGGGGGGggg point 0 silent GTA->GTG[Val->Val] MTCE.26 3971 CB6648_redo MtDNA 8429 1 A G 255 1.00 63 62 0 255 255 @GGGGGGGGGGGGGGGGGggggggggggggggggggGGGGGGGGGGGGGGGGGGGGGgggggggggggGGGGGGGGGGGGGGGGGGGGGGGGGGGGGggg point 0 three_prime_UTR none MTCE.25 3972 CB6648_redo MtDNA 12260 1 T A 255 1.00 63 62 0 255 255 @AAAAAAAAAAAaaaaaaaaaaaaaaAAAAAAAAAAAAAAAAAAAAAaaaaaaaaaAAAAAAAAAAAAAAAAAAAAAAAaaaaaaaaAAAAAAAAAAAAA point 0 silent GCT->GCA[Ala->Ala] MTCE.35 3972 CB6648_redo MtDNA 12260 1 T A 255 1.00 63 62 0 255 255 @AAAAAAAAAAAaaaaaaaaaaaaaaAAAAAAAAAAAAAAAAAAAAAaaaaaaaaaAAAAAAAAAAAAAAAAAAAAAAAaaaaaaaaAAAAAAAAAAAAA point 0 three_prime_UTR none MTCE.34 3973 CB6648_redo MtDNA 12998 1 C T 255 1.00 63 62 1 254 255 @tttttttttttTtttttttttttTtttttttttttttttttTttttttttttTttttttttttttttttttttttttttttttttttttTTtttttttt point 0 silent GGC->GGT[Gly->Gly] MTCE.35 3973 CB6648_redo MtDNA 12998 1 C T 255 1.00 63 62 1 254 255 @tttttttttttTtttttttttttTtttttttttttttttttTttttttttttTttttttttttttttttttttttttttttttttttttTTtttttttt point 0 three_prime_UTR none MTCE.34 2555 CB6648_redo V 705 1 C T 255 1.88 63 62 10 36 46 @T.ttTT..TT.TT.TTT,tt,T,,t.TTTTTTTTtTtttttTTTTT point 0 nongenic -774 upstream cTel3X.1 2556 CB6648_redo V 721 1 C G 255 1.69 63 62 3 32 35 @g,GG,g.GGGGGGGGgGgggggGGGGGGGGGgGgg point 0 nongenic -758 upstream cTel3X.1 2557 CB6648_redo V 46068 1 G C 240 1.00 63 62 0 12 12 @ccccccCccccc point 0 nongenic -2853 upstream B0348.1 2557 CB6648_redo V 46068 1 G C 240 1.00 63 62 0 12 12 @ccccccCccccc point 0 nongenic 602 into B0348.2 2558 CB6648_redo V 46069 1 T G 245 1.00 63 62 0 14 14 @ggggggGggggggg point 0 nongenic -2852 upstream B0348.1 2558 CB6648_redo V 46069 1 T G 245 1.00 63 62 0 14 14 @ggggggGggggggg point 0 nongenic 603 into B0348.2 2559 CB6648_redo V 46079 1 C A 255 1.00 63 62 0 16 16 @AaaaaaaaAAAaaaAa point 0 nongenic -2842 upstream B0348.1 2559 CB6648_redo V 46079 1 C A 255 1.00 63 62 0 16 16 @AaaaaaaaAAAaaaAa point 0 nongenic 613 into B0348.2 2560 CB6648_redo V 46135 1 C G 255 1.00 63 62 0 43 43 @ggGgGgGggggggGGGGgGggGgggGggGGgGgggGGGggGGG point 0 SNP none haw67774 2561 CB6648_redo V 112507 1 A G 255 1.00 63 62 0 36 36 @gGggGGGgGGGgGgGGGGgGGGgggGgGgggGGgGG point 0 silent GAA->GAG[Glu->Glu] Y38C9A.1 2562 CB6648_redo V 198833 1 A T 255 1.00 63 62 0 29 29 @TttTtTtTtTTttTTTTtTTTtTTTTTtt point 0 nongenic -3894 upstream DC2.8 2562 CB6648_redo V 198833 1 A T 255 1.00 63 62 0 29 29 @TttTtTtTtTTttTTTTtTTTtTTTTTtt point 0 nongenic 1855 into Y108G3AL.7 2563 CB6648_redo V 265179 1 C A 255 3.75 63 62 1 254 255 @AAAAaaaaAAAaaaAAAAAAAAAAAAAAAAaaaaaaaaaaaaAAAAaaaaaAAAAAAAaaaAAAAAaaaAA,AAAAAAAaaaaaaaaaAAAAAAAAaaa point 0 nongenic -3127 upstream Y58G8A.1 2563 CB6648_redo V 265179 1 C A 255 3.75 63 62 1 254 255 @AAAAaaaaAAAaaaAAAAAAAAAAAAAAAAaaaaaaaaaaaaAAAAaaaaaAAAAAAAaaaAAAAAaaaAA,AAAAAAAaaaaaaaaaAAAAAAAAaaa point 0 nongenic -7197 upstream R02C2.4 2564 CB6648_redo V 265207 1 C A 255 1.31 63 62 1 254 255 @AAAAAAAaAAAAAAAAAAAAAAAAAAAAaAAAAAAAAAAAAAAAAaaAAAAAAAAAAAAAaaaaaAAAAAAAAAAAAAAAAAAAAAAAAAAAAAaaaAA point 0 SNP none haw67964 2565 CB6648_redo V 265223 1 T C 255 3.00 63 62 356 -101 255 @Cc,CCC,cCCcCCCCCCCCCCCCCC,cccccCCC,CCCCCCCCCCCCCCCCCccc.cCCCCCCCCCCCCCC,CCCCCcccCCCCCCCCCCC,CCCc.c, point 0 nongenic -3083 upstream Y58G8A.1 2565 CB6648_redo V 265223 1 T C 255 3.00 63 62 356 -101 255 @Cc,CCC,cCCcCCCCCCCCCCCCCC,cccccCCC,CCCCCCCCCCCCCCCCCccc.cCCCCCCCCCCCCCC,CCCCCcccCCCCCCCCCCC,CCCc.c, point 0 nongenic -7241 upstream R02C2.4 2566 CB6648_redo V 265542 1 G A 110 3.12 63 62 185 70 255 @,,,,,,,,t..t.a.aa.a..a...,,,,,,,,,,,,a..a.aaaa...aa.a.,,,,,,,,,,,,ta....aaa.aaaata.aa...a.,,,,,,,,. point 0 SNP none haw67966 2567 CB6648_redo V 265892 1 G T 147 4.44 45 18 84 171 255 @TTCCTTTTATTCTttttttttcTT,CTTTTtttttatt,T,,ttctctttc.ttT,tttttttttTTtctcttcctcttttcttt,T,TTtctttt.tT point 0 nongenic -2414 upstream Y58G8A.1 2567 CB6648_redo V 265892 1 G T 147 4.44 45 18 84 171 255 @TTCCTTTTATTCTttttttttcTT,CTTTTtttttatt,T,,ttctctttc.ttT,tttttttttTTtctcttcctcttttcttt,T,TTtctttt.tT point 0 nongenic -7910 upstream R02C2.4 2568 CB6648_redo V 265967 1 A T 3 5.19 0 6 15 144 159 @ttttttttttttttttt,ttttttt,.,t.tttttttttttt,tttttttttttttttttttttttttttttt,ttttttttttttttttttttttttt point 0 nongenic -2339 upstream Y58G8A.1 2568 CB6648_redo V 265967 1 A T 3 5.19 0 6 15 144 159 @ttttttttttttttttt,ttttttt,.,t.tttttttttttt,tttttttttttttttttttttttttttttt,ttttttttttttttttttttttttt point 0 nongenic -7985 upstream R02C2.4 2569 CB6648_redo V 266107 1 T C 3 5.25 0 0 17 51 68 @CCCcCcCC,ccCc.c.c,C.C,,.C,C,.CC.cCCCC,cCccC,,.ccccC,cccCCcccCCccCccc point 0 nongenic -2199 upstream Y58G8A.1 2569 CB6648_redo V 266107 1 T C 3 5.25 0 0 17 51 68 @CCCcCcCC,ccCc.c.c,C.C,,.C,C,.CC.cCCCC,cCccC,,.ccccC,cccCCcccCCccCccc point 0 nongenic -8125 upstream R02C2.4 2570 CB6648_redo V 266166 1 A C 54 3.62 46 62 315 -60 255 @ccc.c.c.c.......C.c..c..c..ccc..c,,,C...c.c..CCC.c.c.cCc...cc.cC,c...c..CCCC,.cccccc,,,C,.ccccc.c.c point 0 nongenic -2140 upstream Y58G8A.1 2570 CB6648_redo V 266166 1 A C 54 3.62 46 62 315 -60 255 @ccc.c.c.c.......C.c..c..c..ccc..c,,,C...c.c..CCC.c.c.cCc...cc.cC,c...c..CCCC,.cccccc,,,C,.ccccc.c.c point 0 nongenic -8184 upstream R02C2.4 2571 CB6648_redo V 266622 1 T C 3 4.69 0 14 20 31 51 @CCCcc.,c..,CCC.cc,CCCC...,CCC.,C,,CC,Cc,,CC.ccC.CCc point 0 nongenic -1684 upstream Y58G8A.1 2571 CB6648_redo V 266622 1 T C 3 4.69 0 14 20 31 51 @CCCcc.,c..,CCC.cc,CCCC...,CCC.,C,,CC,Cc,,CC.ccC.CCc point 0 nongenic -8640 upstream R02C2.4 2572 CB6648_redo V 266681 1 A C 20 3.88 37 46 256 -1 255 @.,C.c.CCC.,CC..C,,CC,,Cccc,,C,CCCcc,C,,C,,C,ccc,,,,..c,,,,CC,.c.,C,C,,.,C.,,,,,ccccc,,,ccCCC,..cccc point 0 nongenic -1625 upstream Y58G8A.1 2572 CB6648_redo V 266681 1 A C 20 3.88 37 46 256 -1 255 @.,C.c.CCC.,CC..C,,CC,,Cccc,,C,CCCcc,C,,C,,C,ccc,,,,..c,,,,CC,.c.,C,C,,.,C.,,,,,ccccc,,,ccCCC,..cccc point 0 nongenic -8699 upstream R02C2.4 2573 CB6648_redo V 306867 1 G A 112 6.75 63 62 1 7 8 @aaaaaaa, point 0 nongenic -2152 upstream F33E11.3 2573 CB6648_redo V 306867 1 G A 112 6.75 63 62 1 7 8 @aaaaaaa, point 0 nongenic 1429 into F33E11.6b 2573 CB6648_redo V 306867 1 G A 112 6.75 63 62 1 7 8 @aaaaaaa, point 0 nongenic 552 downstream F33E11.6a 2574 CB6648_redo V 306925 1 G A 195 1.06 63 62 0 11 11 @AAAAAAAAAAA point 0 nongenic -2210 upstream F33E11.3 2574 CB6648_redo V 306925 1 G A 195 1.06 63 62 0 11 11 @AAAAAAAAAAA point 0 nongenic 1487 into F33E11.6b 2574 CB6648_redo V 306925 1 G A 195 1.06 63 62 0 11 11 @AAAAAAAAAAA point 0 nongenic 494 downstream F33E11.6a 2575 CB6648_redo V 361876 1 A G 255 1.00 63 62 0 32 32 @ggGgGGgGGGgggGgGgGgGGGGgggGggGGg point 0 SNP none haw68038 2576 CB6648_redo V 775416 1 C T 255 1.00 63 62 0 56 56 @TtTtTtTTTttTttttTtttttTttTtTtTtTttttTTtTttttttttTTTTtttT point 0 nongenic -2156 upstream R09E12.9 2576 CB6648_redo V 775416 1 C T 255 1.00 63 62 0 56 56 @TtTtTtTTTttTttttTtttttTttTtTtTtTttttTTtTttttttttTTTTtttT point 0 nongenic 420 into R09E12.2 2576 CB6648_redo V 775416 1 C T 255 1.00 63 62 0 56 56 @TtTtTtTTTttTttttTtttttTttTtTtTtTttttTTtTttttttttTTTTtttT point 0 nongenic 559 downstream R09E12.3 2577 CB6648_redo V 897208 1 C A 255 1.00 63 62 0 54 54 @aaaAaAAAAAaaaAaAaaaaaAaaaaaaAaAaaaaaAAaaAaaaaAAaAaAaAa point 0 nongenic -7931 upstream T02B11.6 2577 CB6648_redo V 897208 1 C A 255 1.00 63 62 0 54 54 @aaaAaAAAAAaaaAaAaaaaaAaaaaaaAaAaaaaaAAaaAaaaaAAaAaAaAa point 0 nongenic 1946 into T02B11.7 2578 CB6648_redo V 907030 1 C T 255 1.00 63 62 0 47 47 @tTTtTtttTttTtTttTTtttTttttttttttTttTtTttttTtTtT point 0 SNP none haw69383 4554 CB6648_redo V 931553 0 X X -1000 -999.99 -1000 -1000 4 0 4 @,,..Aaa indel 0 nongenic -4847 upstream Y50D4C.2 2579 CB6648_redo V 931554 1 G T 4 1.00 63 34 3 4 7 @TTtt,.. point 0 nongenic -4845 upstream Y50D4C.2 2585 CB6648_redo V 1123372 1 T G 24 1.00 63 42 1 3 4 @G.gg point 0 nongenic 1319 into W07B8.3 2589 CB6648_redo V 1210301 1 A G 85 1.00 63 62 1 4 5 @gggg, point 0 nongenic 2411 into Y50D4A.1a,Y50D4A.1b 160857 CB6648_redo V 1210370 219 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered codon 136 to codon 210 (9 % of 822 codons) Y50D4A.1a 160857 CB6648_redo V 1210370 219 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered codon 5 to codon 79 (11 % of 691 codons) Y50D4A.1b 2595 CB6648_redo V 1273548 1 C G 130 1.44 63 62 0 9 9 @ggggggggg point 0 nongenic 573 downstream Y75B7B.1 2595 CB6648_redo V 1273548 1 C G 130 1.44 63 62 0 9 9 @ggggggggg point 0 nongenic 663 downstream Y75B7B.2 2597 CB6648_redo V 1553951 1 T G 255 1.00 63 62 0 33 33 @GgGGGGGGgGGGGGgGGggggggGgGgGggGGG point 0 nongenic -6705 upstream F52F10.1 2597 CB6648_redo V 1553951 1 T G 255 1.00 63 62 0 33 33 @GgGGGGGGgGGGGGgGGggggggGgGgGggGGG point 0 nongenic -847 upstream F52F10.5 2598 CB6648_redo V 1637978 1 G T 231 5.69 63 62 65 86 151 @,T,..tTT..T.TTt.T..T.TTTT,TT,,,,,,,TtT,Tt.,.,TTt.,ttTTT.tTTTT,TTTTTT,TTTTTTttttTTTTTTTTTTtttTTTTTT, point 0 nongenic -2330 upstream Y46H3D.2 2598 CB6648_redo V 1637978 1 G T 231 5.69 63 62 65 86 151 @,T,..tTT..T.TTt.T..T.TTTT,TT,,,,,,,TtT,Tt.,.,TTt.,ttTTT.tTTTT,TTTTTT,TTTTTTttttTTTTTTTTTTtttTTTTTT, point 0 nongenic 1305 into Y46H3D.3 2599 CB6648_redo V 1638167 1 T A 3 7.00 0 2 58 86 144 @A.AA.AA...,..,,AAaaAAaA.AAa..aAA....,aaAaAaaaa,a.AaAaa.AaA.aaAAAA.aaaAAAAA..aAA.aaAAAAAA.aaAAa.aAAA point 0 nongenic -2141 upstream Y46H3D.2 2599 CB6648_redo V 1638167 1 T A 3 7.00 0 2 58 86 144 @A.AA.AA...,..,,AAaaAAaA.AAa..aAA....,aaAaAaaaa,a.AaAaa.AaA.aaAAAA.aaaAAAAA..aAA.aaAAAAAA.aaAAa.aAAA point 0 nongenic 1116 into Y46H3D.3 2600 CB6648_redo V 1638979 1 A G 255 3.00 63 62 106 149 255 @,,,G,Ggg..gggg...g.g.,,G,TGgggg..GGG,GG,,GGGGGg.gggg.gggggGG,G,GGGGGGGG,gggg.ggg..,G,GGGGG,,,Gggggg point 0 nongenic -1329 upstream Y46H3D.2 2600 CB6648_redo V 1638979 1 A G 255 3.00 63 62 106 149 255 @,,,G,Ggg..gggg...g.g.,,G,TGgggg..GGG,GG,,GGGGGg.gggg.gggggGG,G,GGGGGGGG,gggg.ggg..,G,GGGGG,,,Gggggg point 0 nongenic 304 into Y46H3D.3 2601 CB6648_redo V 1712941 1 C T 6 3.75 0 4 4 11 15 @TTTTT.Tt.t..Ttt point 0 nongenic -4302 upstream ZK697.5 2601 CB6648_redo V 1712941 1 C T 6 3.75 0 4 4 11 15 @TTTTT.Tt.t..Ttt point 0 nongenic 1550 into Y46H3C.1 2610 CB6648_redo V 1714669 1 T C 255 2.44 63 62 5 19 24 @.....CCCCCCCCccCCCCCCCCC point 0 nongenic -2574 upstream ZK697.5 2610 CB6648_redo V 1714669 1 T C 255 2.44 63 62 5 19 24 @.....CCCCCCCCccCCCCCCCCC point 0 nongenic 732 into Y46H3C.1 2611 CB6648_redo V 1732428 1 C T 255 1.00 63 62 0 41 41 @tTttTtttTTTtttTTttTTTtTttttTTTtTTTtTTTtTT point 0 nongenic -2441 upstream ZK697.10 2611 CB6648_redo V 1732428 1 C T 255 1.00 63 62 0 41 41 @tTttTtttTTTtttTTttTTTtTttttTTTtTTTtTTTtTT point 0 nongenic -426 upstream ZK697.6 2619 CB6648_redo V 1933692 1 G C 20 1.00 63 32 1 3 4 @,ccc point 0 nongenic -11263 upstream T06A1.4 4556 CB6648_redo V 2019954 0 X X -1000 -999.99 -1000 -1000 3 1 4 @,,,aAa indel 0 nongenic -2658 upstream F59A7.5b 4556 CB6648_redo V 2019954 0 X X -1000 -999.99 -1000 -1000 3 1 4 @,,,aAa indel 0 nongenic -3415 upstream F59A7.2 2622 CB6648_redo V 2255011 1 G A 255 2.38 63 62 0 19 19 @aaAaAaAaAAAAaAAAAAA point 0 nongenic -407 upstream F41B5.8 2626 CB6648_redo V 2578146 1 G C 255 1.00 63 62 0 28 28 @ccccCcccccccCccCccccCcccCcCc point 0 nongenic -2725 upstream C29G2.3 2626 CB6648_redo V 2578146 1 G C 255 1.00 63 62 0 28 28 @ccccCcccccccCccCccccCcccCcCc point 0 nongenic 244 into C29G2.4 2627 CB6648_redo V 2646661 1 G C 68 1.00 63 62 3 7 10 @...CCCCCCC point 0 nongenic 282 downstream W02H5.1 2627 CB6648_redo V 2646661 1 G C 68 1.00 63 62 3 7 10 @...CCCCCCC point 0 nongenic 404 downstream W02H5.8 2637 CB6648_redo V 2886702 1 T C 103 2.19 63 62 19 42 61 @,.,..,.,,.,,,......CccCcCCCCccccCcCccccCcCCcccCCccccCcCccCccc point 0 nongenic 277 downstream F37B4.9 2637 CB6648_redo V 2886702 1 T C 103 2.19 63 62 19 42 61 @,.,..,.,,.,,,......CccCcCCCCccccCcCccccCcCCcccCCccccCcCccCccc point 0 nongenic 487 downstream F37B4.8 2639 CB6648_redo V 3017813 1 A G 255 5.31 63 62 0 29 29 @GGgGggGGGGGGgGgGgggggGGGGGGgg point 0 nongenic 546 downstream K12D9.14 2642 CB6648_redo V 3276306 1 A C 103 1.00 63 62 4 7 11 @cCCCccC.... point 0 nongenic 196 downstream T28A11.3 2642 CB6648_redo V 3276306 1 A C 103 1.00 63 62 4 7 11 @cCCCccC.... point 0 nongenic 778 downstream T28A11.21 2643 CB6648_redo V 3475496 1 G A 255 1.00 63 62 0 27 27 @aaaAaAAaAAAAAaaaAaAaAaaaAAa point 0 nongenic -376 upstream C02A12.8 2643 CB6648_redo V 3475496 1 G A 255 1.00 63 62 0 27 27 @aaaAaAAaAAAAAaaaAaAaAaaaAAa point 0 nongenic 906 downstream C02A12.9 2644 CB6648_redo V 3553614 1 T C 255 1.00 63 62 0 41 41 @cccCccccCccCccCccCcCCCcccccCcCcccCcCCCCcc point 0 nongenic -1750 upstream T24A6.15 2644 CB6648_redo V 3553614 1 T C 255 1.00 63 62 0 41 41 @cccCccccCccCccCccCcCCCcccccCcCcccCcCCCCcc point 0 nongenic 468 into T24A6.20 2644 CB6648_redo V 3553614 1 T C 255 1.00 63 62 0 41 41 @cccCccccCccCccCccCcCCCcccccCcCcccCcCCCCcc point 0 nongenic 994 downstream T24A6.18 2647 CB6648_redo V 3568979 1 G T 206 5.25 63 62 0 13 13 @TTTTtTTttTTTT point 0 nongenic -1189 upstream F40C5.2 2647 CB6648_redo V 3568979 1 G T 206 5.25 63 62 0 13 13 @TTTTtTTttTTTT point 0 nongenic -3522 upstream T24A6.17 2648 CB6648_redo V 3811974 1 A G 29 1.00 63 2 1 4 5 @GgGG. point 0 nongenic -353 upstream H10D18.4 2648 CB6648_redo V 3811974 1 A G 29 1.00 63 2 1 4 5 @GgGG. point 0 nongenic -606 upstream H10D18.2 2649 CB6648_redo V 3844326 1 G A 122 1.00 63 0 0 4 4 @AAaa point 0 nongenic -333 upstream F47C10.6 2649 CB6648_redo V 3844326 1 G A 122 1.00 63 0 0 4 4 @AAaa point 0 nongenic 303 downstream F47C10.1 2655 CB6648_redo V 4139271 1 C G 12 1.00 63 0 4 5 9 @...,GgggG point 0 nongenic -146 upstream Y45G5AL.2 2655 CB6648_redo V 4139271 1 C G 12 1.00 63 0 4 5 9 @...,GgggG point 0 nongenic 460 downstream T05B4.1 2656 CB6648_redo V 4164869 1 A C 255 1.00 63 62 0 31 31 @ccCcccCCCCCCccCcCccccccCcCCCcCC point 0 missense ATT->CTT[Ile->Leu] Y45G5AM.3 2658 CB6648_redo V 4321387 1 T A 175 1.00 63 62 0 5 5 @AaAaA point 0 nongenic -2060 upstream ZC132.9 2658 CB6648_redo V 4321387 1 T A 175 1.00 63 62 0 5 5 @AaAaA point 0 nongenic -5728 upstream D2063.1 2658 CB6648_redo V 4321387 1 T A 175 1.00 63 62 0 5 5 @AaAaA point 0 nongenic 954 into R02D1.1 2659 CB6648_redo V 4321389 1 A T 136 1.00 63 62 1 5 6 @TtTtT, point 0 nongenic -2062 upstream ZC132.9 2659 CB6648_redo V 4321389 1 A T 136 1.00 63 62 1 5 6 @TtTtT, point 0 nongenic -5726 upstream D2063.1 2659 CB6648_redo V 4321389 1 A T 136 1.00 63 62 1 5 6 @TtTtT, point 0 nongenic 956 into R02D1.1 2660 CB6648_redo V 4329455 1 A C 255 1.00 63 62 0 33 33 @CCCcCcccCCCCcCCCCccCCcCCccCcCCCcc point 0 SNP none haw75410 2661 CB6648_redo V 4343578 1 A C 233 8.62 63 62 2 38 40 @CCCCCCCCCCCCCCCc.CCCCCCCCCCCC.cCCCCCcCCN point 0 nongenic -2281 upstream D2063.3a.1 2661 CB6648_redo V 4343578 1 A C 233 8.62 63 62 2 38 40 @CCCCCCCCCCCCCCCc.CCCCCCCCCCCC.cCCCCCcCCN point 0 nongenic 2154 into F32D1.1 2662 CB6648_redo V 4351933 1 T G 196 8.50 63 62 2 8 10 @gGgggggG.. point 0 nongenic 2164 into F32D1.3 2663 CB6648_redo V 4447836 1 C G 226 1.44 63 62 0 16 16 @GGGGGGGGGGGGGGGG point 0 nongenic -4760 upstream Y47D7A.16 2663 CB6648_redo V 4447836 1 C G 226 1.44 63 62 0 16 16 @GGGGGGGGGGGGGGGG point 0 nongenic 2706 into Y47D7A.14 2665 CB6648_redo V 4597289 1 A G 255 1.00 63 62 0 27 27 @GgggggGGGgggggGggggGGGGggGg point 0 SNP none haw75689 2668 CB6648_redo V 4612571 1 T G 255 1.00 63 62 0 34 34 @gGGGGGgGgGGgGGgGGGgggggGGGGGGGgggg point 0 missense GAG->GCG[Glu->Ala] Y61A9LA.10 2669 CB6648_redo V 4704362 1 T A 23 1.00 63 62 3 5 8 @...AAaAA point 0 nongenic -3896 upstream ZC266.1 2669 CB6648_redo V 4704362 1 T A 23 1.00 63 62 3 5 8 @...AAaAA point 0 nongenic -6551 upstream F39G3.6 160859 CB6648_redo V 4909246 91 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 389 to 480 bp into H23N18.1 2673 CB6648_redo V 5084618 1 G C 114 2.00 63 62 1 5 6 @CCCCC, point 0 silent GTC->GTG[Val->Val] Y58A7A.4 2674 CB6648_redo V 5084620 1 C G 114 2.00 63 62 1 5 6 @GGGGG, point 0 missense GTC->CTC[Val->Leu] Y58A7A.4 2675 CB6648_redo V 5084624 1 G A 87 2.00 63 4 1 3 4 @AAA, point 0 silent TAC->TAT[Tyr->Tyr] Y58A7A.4 2677 CB6648_redo V 5084723 1 A T 129 2.00 63 62 0 7 7 @tTTTTTt point 0 nongenic -3841 upstream Y58A7A.3 2677 CB6648_redo V 5084723 1 A T 129 2.00 63 62 0 7 7 @tTTTTTt point 0 nongenic 270 into Y58A7A.4 2678 CB6648_redo V 5084742 1 G A 235 2.00 63 62 0 22 22 @aAAAAAaaAaAAAAAaAaAAAA point 0 missense CCG->CTG[Pro->Leu] Y58A7A.4 2679 CB6648_redo V 5084780 1 A G 227 2.00 63 62 0 29 29 @GGGGGgGgGGGGggggGGggGGgGggGGg point 0 silent GAT->GAC[Asp->Asp] Y58A7A.4 2680 CB6648_redo V 5084791 1 C A 218 2.00 63 62 0 24 24 @aaaaAAaaAAaAaaAAaAaAAAaA point 0 missense GCA->TCA[Ala->Ser] Y58A7A.4 2681 CB6648_redo V 5117072 1 T G 3 1.00 63 0 1 8 9 @GGG,GGGGG point 0 nongenic -2882 upstream C04F5.1 2681 CB6648_redo V 5117072 1 T G 3 1.00 63 0 1 8 9 @GGG,GGGGG point 0 nongenic -3332 upstream C04F5.8 2681 CB6648_redo V 5117072 1 T G 3 1.00 63 0 1 8 9 @GGG,GGGGG point 0 nongenic 2123 into C04F5.9 2685 CB6648_redo V 5124714 1 T A 255 1.00 63 62 0 32 32 @aAaaaaaaAAAAaAaAaaaAAaAAAAaaAAAa point 0 SNP none haw76186 2686 CB6648_redo V 5162301 1 C G 63 1.00 63 4 0 4 4 @GGgG point 0 nongenic -423 upstream C03A7.7 2687 CB6648_redo V 5280059 1 C G 38 4.75 63 10 5 9 14 @,,G,,gg,gggggg point 0 nongenic -1973 upstream B0238.9 2690 CB6648_redo V 5284679 1 C T 198 8.81 63 62 0 32 32 @TttTttttTtttTtTTTtTTttTTTTTTTttt point 0 nongenic -6593 upstream B0238.9 2691 CB6648_redo V 5284688 1 T C 255 3.69 63 62 21 201 222 @..,....,.c.,cC,CcCCc.CCCCCC,cc.CCCCCCCCCCCccCCCCCCCCCCCccccCCCCCccccc.cccccCCCCCCCCCCCCC.cccccccccc point 0 nongenic -6602 upstream B0238.9 2699 CB6648_redo V 5755509 1 G T 44 1.00 63 62 6 12 18 @.t.ttt.tt..ttt.ttt point 0 missense CAG->AAG[Gln->Lys] K09H11.11 2704 CB6648_redo V 6048318 1 C A 255 1.00 63 62 0 33 33 @aaAAaaaaAAAAAaAAAAaAaAAAAAaaAaAAA point 0 SNP none haw77329 2704 CB6648_redo V 6048318 1 C A 255 1.00 63 62 0 33 33 @aaAAaaaaAAAAAaAAAAaAaAAAAAaaAaAAA point 0 three_prime_UTR none R01B10.5.1 2705 CB6648_redo V 6052074 1 T C 255 1.00 63 62 0 21 21 @cCcCCcCCCCCCCcCCCcccC point 0 SNP none haw77333 2706 CB6648_redo V 6070764 1 C G 32 6.12 14 26 0 10 10 @GGggGgggGg point 0 nongenic -25246 upstream Y38A10A.7 2706 CB6648_redo V 6070764 1 C G 32 6.12 14 26 0 10 10 @GGggGgggGg point 0 nongenic -712 upstream Y38A10A.4 2729 CB6648_redo V 6172858 1 T C 3 6.06 0 2 10 53 63 @c.,C....C..CC,CCCCCCCCCcCCCcCCccCCCCCCcCCCCCCCCCCCCCCC,CCCCCCCC point 0 silent CAA->CAG[Gln->Gln] W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g 2732 CB6648_redo V 6177079 1 C A 115 2.62 63 62 3 14 17 @AAaaaaaaaaaaaa,.. point 0 silent GTG->GTT[Val->Val] W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g 2733 CB6648_redo V 6177083 1 T G 3 4.81 0 18 3 5 8 @ggggg,.. point 0 missense CAA->CCA[Gln->Pro] W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g 2737 CB6648_redo V 6178815 1 T C 3 6.94 0 2 6 11 17 @,..,ccc,cccc,cccc point 0 missense ATT->GTT[Ile->Val] W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g 2738 CB6648_redo V 6179154 1 C T 3 7.12 0 2 11 13 24 @TT..,TTTTT.TT,Tt.t.T.... point 0 missense GCA->ACA[Ala->Thr] W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g 2740 CB6648_redo V 6183103 1 T A 33 5.38 63 62 41 75 116 @aaaaa,aaa,AA,aa.aaaaaaaaa,aaaA,Aaa,,Aaaa,.AaaaaaaaaAAAa.aa.aaaa,a.,Aaaa,.aa..a,.,a.a,A,.a,aaa,,..a. point 0 silent CCA->CCT[Pro->Pro] W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g 2741 CB6648_redo V 6302463 1 A G 255 1.75 63 62 0 32 32 @gGggGGGgGGGgggGgGGgggGgGgggggGGg point 0 nongenic -1318 upstream K12B6.1 2741 CB6648_redo V 6302463 1 A G 255 1.75 63 62 0 32 32 @gGggGGGgGGGgggGgGGgggGgGgggggGGg point 0 nongenic -3026 upstream K12B6.7 2748 CB6648_redo V 6865466 1 C G 20 1.00 63 36 1 3 4 @.GGg point 0 nongenic -10679 upstream C55H1.2 2748 CB6648_redo V 6865466 1 C G 20 1.00 63 36 1 3 4 @.GGg point 0 nongenic -4825 upstream T19F4.1a,T19F4.1b 2749 CB6648_redo V 6889636 1 C G 255 1.00 63 62 0 33 33 @gGgGgGggggGgggGgggggggGgggGggGggg point 0 silent GCC->GCG[Ala->Ala] K11C4.3b 2750 CB6648_redo V 6889637 1 G C 255 1.00 63 62 0 33 33 @CcCcCccccCcccCcccccccCcccCccCcccc point 0 missense GCA->CCA[Ala->Pro] K11C4.3b 2752 CB6648_redo V 6941197 1 T C 3 5.75 0 2 5 47 52 @,C.CccCCc.CCCCCCcc.ccCCCCCCCCCcCcCCCCCccCccc.ccCcCCC point 0 nongenic -5353 upstream Y57E12B.3 2756 CB6648_redo V 6942940 1 A G 3 8.12 0 0 9 49 58 @Gggg,gGggGgggGGGggGgggggggG,GggggGGgggGggggG,gg.gg,,,G,gg, point 0 nongenic -7096 upstream Y57E12B.3 2757 CB6648_redo V 6956711 1 T C 255 1.00 63 62 0 18 18 @CCCccCcCcCcccCCCcc point 0 five_prime_UTR none T07H8.4f.2,T07H8.4f.3 2757 CB6648_redo V 6956711 1 T C 255 1.00 63 62 0 18 18 @CCCccCcCcCcccCCCcc point 0 missense CTA->CCA[Leu->Pro] T07H8.4a,T07H8.4b,T07H8.4c,T07H8.4d.1,T07H8.4d.2,T07H8.4h.1,T07H8.4h.2,T07H8.4i,T07H8.4j 2758 CB6648_redo V 6956743 1 C G 255 1.00 63 62 0 16 16 @ggggggGGggggGggG point 0 five_prime_UTR none T07H8.4f.1,T07H8.4f.2,T07H8.4f.3 2758 CB6648_redo V 6956743 1 C G 255 1.00 63 62 0 16 16 @ggggggGGggggGggG point 0 missense CGC->GGC[Arg->Gly] T07H8.4a,T07H8.4b,T07H8.4c,T07H8.4d.1,T07H8.4d.2,T07H8.4h.1,T07H8.4h.2,T07H8.4i,T07H8.4j 2759 CB6648_redo V 6956744 1 G C 255 1.00 63 62 0 17 17 @cccccCCccccCccCcc point 0 five_prime_UTR none T07H8.4f.1,T07H8.4f.2,T07H8.4f.3 2759 CB6648_redo V 6956744 1 G C 255 1.00 63 62 0 17 17 @cccccCCccccCccCcc point 0 missense CGC->CCC[Arg->Pro] T07H8.4a,T07H8.4b,T07H8.4c,T07H8.4d.1,T07H8.4d.2,T07H8.4h.1,T07H8.4h.2,T07H8.4i,T07H8.4j 4564 CB6648_redo V 7205626 0 X X -1000 -999.99 -1000 -1000 6 -2 4 @,...,.aA indel 0 three_prime_UTR none C13F10.4 2762 CB6648_redo V 7205627 1 G C 38 1.00 63 34 3 6 9 @CcccCc.,, point 0 three_prime_UTR none C13F10.4 2763 CB6648_redo V 7205628 1 C A 35 1.00 63 38 3 5 8 @aaaAa.,, point 0 three_prime_UTR none C13F10.4 2764 CB6648_redo V 7245105 1 C G 255 1.00 63 62 0 39 39 @GgggGgGgggGgggggggGGgGGGgGGgGGggGgggGgg point 0 SNP none haw78505 4565 CB6648_redo V 7386791 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,,,Aa indel 0 nongenic -691 upstream C03G6.19 2765 CB6648_redo V 7403427 1 A G 255 1.00 63 62 0 53 53 @gGggGGGGGgGgGGgggGGGGGGGGGgGgGgggggggGGgGgGGGGggggggg point 0 silent GAA->GAG[Glu->Glu] R13D7.3 2765 CB6648_redo V 7403427 1 A G 255 1.00 63 62 0 53 53 @gGggGGGGGgGgGGgggGGGGGGGGGgGgGgggggggGGgGgGGGGggggggg point 0 SNP none uCE5-1535 2766 CB6648_redo V 7546600 1 G A 255 1.00 63 62 0 30 30 @AAAaAaaaaAAAaaaAaAaaAAAaaaAaaA point 0 missense CAC->TAC[His->Tyr] C54F6.14 2766 CB6648_redo V 7546600 1 G A 255 1.00 63 62 0 30 30 @AAAaAaaaaAAAaaaAaAaaAAAaaaAaaA point 0 SNP none uCE5-1545 2767 CB6648_redo V 7725862 1 G A 69 1.00 63 62 1 5 6 @Aaaaa, point 0 nongenic -1815 upstream ZK105.6 2767 CB6648_redo V 7725862 1 G A 69 1.00 63 62 1 5 6 @Aaaaa, point 0 nongenic -2931 upstream Y97E10C.1.1 2767 CB6648_redo V 7725862 1 G A 69 1.00 63 62 1 5 6 @Aaaaa, point 0 nongenic 230 into ZK105.8 2768 CB6648_redo V 7860214 1 C A 255 4.75 63 62 0 38 38 @AAAaaAaAaaAaaaAaaAaaaAAAaaAaaaAAaaaaaA point 0 nongenic 323 downstream C37C3.1a 2768 CB6648_redo V 7860214 1 C A 255 4.75 63 62 0 38 38 @AAAaaAaAaaAaaaAaaAaaaAAAaaAaaaAAaaaaaA point 0 nongenic 510 downstream C37C3.1b 2769 CB6648_redo V 7860248 1 A T 255 6.00 63 62 0 32 32 @TTttTtttTTtttttTTttttTTtTtTtttTt point 0 nongenic 357 downstream C37C3.1a 2769 CB6648_redo V 7860248 1 A T 255 6.00 63 62 0 32 32 @TTttTtttTTtttttTTttttTTtTtTtttTt point 0 nongenic 544 downstream C37C3.1b 2770 CB6648_redo V 7912537 1 G C 30 8.25 63 2 1 9 10 @CCCCCCCCc, point 0 nongenic -12695 upstream F40A3.7 2770 CB6648_redo V 7912537 1 G C 30 8.25 63 2 1 9 10 @CCCCCCCCc, point 0 nongenic -13225 upstream Y97E10B.4 2784 CB6648_redo V 8056170 1 G T 255 5.44 63 62 0 28 28 @tTTTttTttTttttTTTTtTtTtttTtt point 0 nongenic -235 upstream ZC513.1 2784 CB6648_redo V 8056170 1 G T 255 5.44 63 62 0 28 28 @tTTTttTttTttttTTTTtTtTtttTtt point 0 nongenic 165 downstream ZC513.2 2801 CB6648_redo V 8533786 1 G C 88 1.44 63 62 2 5 7 @,.ccccC point 0 nongenic -721 upstream F45F2.12 2801 CB6648_redo V 8533786 1 G C 88 1.44 63 62 2 5 7 @,.ccccC point 0 nongenic 45 downstream F45F2.4 2801 CB6648_redo V 8533786 1 G C 88 1.44 63 62 2 5 7 @,.ccccC point 0 nongenic 757 downstream F45F2.13 2804 CB6648_redo V 8804641 1 T A 255 1.00 63 62 0 36 36 @AaaAaAaaaaaaaaAAaAAaaaaAAaaAAAAAaaaa point 0 nongenic -3668 upstream C01B7.5 2804 CB6648_redo V 8804641 1 T A 255 1.00 63 62 0 36 36 @AaaAaAaaaaaaaaAAaAAaaaaAAaaAAAAAaaaa point 0 nongenic 750 downstream C01B7.6 2808 CB6648_redo V 9162494 1 T G 255 1.75 63 62 0 35 35 @GGGGgGgGgGGGGGGGgGGgGggGgGgGGgGGGGG point 0 missense CAA->CCA[Gln->Pro] B0222.7 2809 CB6648_redo V 9338832 1 A T 74 2.69 63 34 1 3 4 @tTt, point 0 nongenic 0 downstream K07B1.2 2809 CB6648_redo V 9338832 1 A T 74 2.69 63 34 1 3 4 @tTt, point 0 nongenic 215 downstream K07B1.8 2812 CB6648_redo V 9340789 1 T G 32 1.50 63 30 2 2 4 @gg., point 0 five_prime_UTR none K07B1.8 2813 CB6648_redo V 9340791 1 C T 30 1.50 63 30 2 2 4 @tt., point 0 five_prime_UTR none K07B1.8 2814 CB6648_redo V 9340793 1 A C 31 1.50 63 30 2 2 4 @cc., point 0 five_prime_UTR none K07B1.8 2816 CB6648_redo V 9376379 1 G T 255 1.00 63 62 0 67 67 @TTTttttTtttTTtttTtTtTTttTTTTtTtTttTttTTTTTTttTTTTTTTtTTTttttTTtTtTT point 0 missense CAA->AAA[Gln->Lys] E02C12.10 2816 CB6648_redo V 9376379 1 G T 255 1.00 63 62 0 67 67 @TTTttttTtttTTtttTtTtTTttTTTTtTtTttTttTTTTTTttTTTTTTTtTTTttttTTtTtTT point 0 SNP none haw80948 2821 CB6648_redo V 9603657 1 G T 255 9.75 63 62 10 37 47 @,t..T.tt.ttTtTTT,ttTTtT.T.TTTTtTTttTtTTTt.Ttt.t point 0 nongenic -4877 upstream K09G1.4a,K09G1.4b 2821 CB6648_redo V 9603657 1 G T 255 9.75 63 62 10 37 47 @,t..T.tt.ttTtTTT,ttTTtT.T.TTTTtTTttTtTTTt.Ttt.t point 0 nongenic -6117 upstream K09G1.3 2822 CB6648_redo V 9603798 1 A G 246 4.81 63 62 6 13 19 @,.g..,.ggggggggGgGG point 0 nongenic -4736 upstream K09G1.4a,K09G1.4b 2822 CB6648_redo V 9603798 1 A G 246 4.81 63 62 6 13 19 @,.g..,.ggggggggGgGG point 0 nongenic -6258 upstream K09G1.3 2825 CB6648_redo V 9662867 1 T C 249 1.00 63 62 0 11 11 @CcCCCcCCCCC point 0 nongenic -1279 upstream B0331.2 2825 CB6648_redo V 9662867 1 T C 249 1.00 63 62 0 11 11 @CcCCCcCCCCC point 0 nongenic -3805 upstream ZK287.1 2826 CB6648_redo V 9663159 1 T G 255 1.00 63 62 0 30 30 @GggggggGGGGgGGgGGgGGggGGGgGgGg point 0 SNP none haw81125 2827 CB6648_redo V 9707449 1 T C 255 1.00 63 62 0 41 41 @CCCCCCCCcCCCCCCCcCCCCCCCcCCccCcCCcCccCcCC point 0 SNP none haw81144 2830 CB6648_redo V 9927293 1 T A 255 1.00 63 62 0 39 39 @aAAaaAAaAaaAaaaaAAaAaaAaaaAaAAAaaaAaaaa point 0 SNP none haw81196 2831 CB6648_redo V 9928614 1 C T 255 1.00 63 62 0 26 26 @tTTTTttTTttTTTTTTTTtTTTTTT point 0 silent CAG->CAA[Gln->Gln] T07C12.12 2831 CB6648_redo V 9928614 1 C T 255 1.00 63 62 0 26 26 @tTTTTttTTttTTTTTTTTtTTTTTT point 0 SNP none haw81197 4581 CB6648_redo V 10164059 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @.,..GG indel 0 nongenic -3010 upstream C51E3.10 4581 CB6648_redo V 10164059 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @.,..GG indel 0 nongenic 172 downstream C51E3.6 2833 CB6648_redo V 10230415 1 C G 84 1.00 63 42 3 7 10 @GGgGGgG,,, point 0 nongenic -822 upstream C12D8.17 2833 CB6648_redo V 10230415 1 C G 84 1.00 63 42 3 7 10 @GGgGGgG,,, point 0 nongenic 310 downstream C12D8.16 2834 CB6648_redo V 10230416 1 A C 43 1.00 63 62 4 7 11 @CCcCCcC,,,. point 0 nongenic -821 upstream C12D8.17 2834 CB6648_redo V 10230416 1 A C 43 1.00 63 62 4 7 11 @CCcCCcC,,,. point 0 nongenic 311 downstream C12D8.16 2836 CB6648_redo V 10397712 1 C A 255 1.00 63 62 0 50 50 @AaAaAAaaaAaaaAAAAAAAAaaAAaaAAaAAAaAaaAaaAaaaaAAaaA point 0 SNP none haw81401 2837 CB6648_redo V 10444115 1 A T 255 1.00 63 62 0 35 35 @tTTtttttTtTTTTtttTTTtttTTtTtTTTtTTT point 0 SNP none haw81421 2839 CB6648_redo V 10449487 1 T C 239 5.81 63 62 36 101 137 @CCCccc.c.cc,.CCCc,CccCc.c,c.....c,,..,.cC..c,.cc..CCcccC.c....ccCCccCCCcCCCcCCCCcCCCccccCCCCcc,cccc point 0 nongenic 386 downstream Y32F6A.6 2842 CB6648_redo V 10449934 1 A G 3 8.38 0 18 1 19 20 @GGGGGGg,GGGgGGGGGGGG point 0 nongenic 833 downstream Y32F6A.6 2843 CB6648_redo V 10548754 1 G T 21 1.00 63 44 2 6 8 @ttttTt,. point 0 missense CCC->ACC[Pro->Thr] F32G8.1 2844 CB6648_redo V 10621928 1 C A 255 1.00 63 62 0 46 46 @aaAAaAaaAaAaaaAaaaAAAAAAAAAaaAaaaaaaAAAAAAaAaA point 0 SNP none haw81482 2846 CB6648_redo V 10866472 1 G A 213 1.69 63 62 9 24 33 @aAA,,aAAAaaAAAaaa,aAaaa,,AaA,a,,, point 0 nongenic -14381 upstream F32D8.1 2846 CB6648_redo V 10866472 1 G A 213 1.69 63 62 9 24 33 @aAA,,aAAAaaAAAaaa,aAaaa,,AaA,a,,, point 0 nongenic -702 upstream F53H10.2a 2847 CB6648_redo V 10893331 1 A C 255 1.00 63 62 0 56 56 @CcCccccCccCccccCcccCcCCCCccCcccCCcccCCcCcCCcCcCCCccCCCCC point 0 SNP none haw81672 2848 CB6648_redo V 11012491 1 A G 18 1.00 63 44 2 4 6 @.,gGgg point 0 nongenic -50 upstream C13G3.1 2854 CB6648_redo V 11026653 1 T G 34 1.00 63 0 0 6 6 @ggGGGg point 0 nongenic -3801 upstream C13G3.2 2854 CB6648_redo V 11026653 1 T G 34 1.00 63 0 0 6 6 @ggGGGg point 0 nongenic 506 downstream C13G3.3a.1 2854 CB6648_redo V 11026653 1 T G 34 1.00 63 0 0 6 6 @ggGGGg point 0 nongenic 837 downstream C13G3.3a.2,C13G3.3b.1,C13G3.3b.2,C13G3.3c 2855 CB6648_redo V 11180409 1 G A 255 1.00 63 62 0 42 42 @AaAaAAaaAAaaAAaaAAAaaAaaAaAaaAAaaAAaaaaaaa point 0 SNP none haw81856 2861 CB6648_redo V 11687322 1 C T 255 1.00 63 62 0 33 33 @TTTTTtTTTTttTtTttTTTTtTTtttTtttTt point 0 SNP none haw82144 2863 CB6648_redo V 11883417 1 A G 255 1.00 63 62 0 31 31 @GGgggggggGGggggGgggGGGgGgggGggg point 0 SNP none haw82276 2882 CB6648_redo V 12579466 1 G T 255 1.00 63 62 0 32 32 @TTttttTTTTTTtTttTttttttTTTtTTTTt point 0 SNP none haw83048 2885 CB6648_redo V 12647441 1 A C 62 1.00 63 62 6 9 15 @CCCCCCccc....,. point 0 nongenic -2396 upstream F56H9.5 2885 CB6648_redo V 12647441 1 A C 62 1.00 63 62 6 9 15 @CCCCCCccc....,. point 0 nongenic -6991 upstream F56H9.3 2885 CB6648_redo V 12647441 1 A C 62 1.00 63 62 6 9 15 @CCCCCCccc....,. point 0 nongenic 623 into F56H9.4 2886 CB6648_redo V 12864064 1 A T 255 1.38 63 62 0 45 45 @TTTttTTttTTTTtTTTTTtTtTtTTtTtttTttTttTTttttTT point 0 nongenic -1829 upstream T07F10.5 2886 CB6648_redo V 12864064 1 A T 255 1.38 63 62 0 45 45 @TTTttTTttTTTTtTTTTTtTtTtTTtTtttTttTttTTttttTT point 0 nongenic 251 downstream T07F10.1a 2886 CB6648_redo V 12864064 1 A T 255 1.38 63 62 0 45 45 @TTTttTTttTTTTtTTTTTtTtTtTTtTtttTttTttTTttttTT point 0 nongenic 300 into T07F10.6 2886 CB6648_redo V 12864064 1 A T 255 1.38 63 62 0 45 45 @TTTttTTttTTTTtTTTTTtTtTtTTtTtttTttTttTTttttTT point 0 nongenic 558 downstream T07F10.1b 2887 CB6648_redo V 12864636 1 A G 153 2.00 63 62 3 24 27 @GGGGG.GGGGG..GGGGGGGGGGGGGG point 0 nongenic -1257 upstream T07F10.5 2887 CB6648_redo V 12864636 1 A G 153 2.00 63 62 3 24 27 @GGGGG.GGGGG..GGGGGGGGGGGGGG point 0 nongenic 823 downstream T07F10.1a 2887 CB6648_redo V 12864636 1 A G 153 2.00 63 62 3 24 27 @GGGGG.GGGGG..GGGGGGGGGGGGGG point 0 nongenic 872 into T07F10.6 2888 CB6648_redo V 12864640 1 C G 160 1.81 63 62 3 23 26 @GGG.GGGGG..GGGGGGGGGGGGGGG point 0 nongenic -1253 upstream T07F10.5 2888 CB6648_redo V 12864640 1 C G 160 1.81 63 62 3 23 26 @GGG.GGGGG..GGGGGGGGGGGGGGG point 0 nongenic 827 downstream T07F10.1a 2888 CB6648_redo V 12864640 1 C G 160 1.81 63 62 3 23 26 @GGG.GGGGG..GGGGGGGGGGGGGGG point 0 nongenic 876 into T07F10.6 4595 CB6648_redo V 12867714 0 X X -1000 -999.99 -1000 -1000 2 -1 1 @,,GgG indel 0 nongenic -184 downstream T07F10.6 4595 CB6648_redo V 12867714 0 X X -1000 -999.99 -1000 -1000 2 -1 1 @,,GgG indel 0 nongenic 292 downstream T07F10.3 2889 CB6648_redo V 12915568 1 A T 255 1.00 63 62 0 52 52 @TTTttTTtTTTttTTtTTTTTTTtTtTttttTTttttttTtTTttTTTTtTt point 0 SNP none haw83378 2890 CB6648_redo V 12919477 1 A G 255 1.00 63 62 0 33 33 @GGggGggGgGGGGGGgGGGgggGGgGGGGGgGg point 0 SNP none haw83380 2891 CB6648_redo V 13150207 1 G A 67 1.00 63 60 3 6 9 @aAAAaa.,. point 0 missense GAT->AAT[Asp->Asn] B0365.7 2892 CB6648_redo V 13150208 1 A T 60 1.00 63 62 3 5 8 @TTTtt.,. point 0 missense GAT->GTT[Asp->Val] B0365.7 2893 CB6648_redo V 13183407 1 A T 24 1.25 63 62 0 9 9 @ggGGGTTTt point 0 nongenic -2258 upstream T09E8.5 2893 CB6648_redo V 13183407 1 A T 24 1.25 63 62 0 9 9 @ggGGGTTTt point 0 nongenic 813 into T09E8.4 2896 CB6648_redo V 13466076 1 G A 255 1.00 63 62 0 42 42 @AAAAaAaaaaaAAAAaAaaAAaaAaAAAAAAAAAAaAaAAaA point 0 SNP none haw83625 2897 CB6648_redo V 13506485 1 T A 186 1.00 63 62 2 9 11 @..AaAaaAaaa point 0 nongenic -3759 upstream R11G10.1b.1 2897 CB6648_redo V 13506485 1 T A 186 1.00 63 62 2 9 11 @..AaAaaAaaa point 0 nongenic 283 into R11G10.4 2897 CB6648_redo V 13506485 1 T A 186 1.00 63 62 2 9 11 @..AaAaaAaaa point 0 nongenic 5216 into R11G10.1a 2898 CB6648_redo V 13506487 1 C T 216 1.00 63 62 2 11 13 @..TtTttTtttTt point 0 nongenic -3761 upstream R11G10.1b.1 2898 CB6648_redo V 13506487 1 C T 216 1.00 63 62 2 11 13 @..TtTttTtttTt point 0 nongenic 281 into R11G10.4 2898 CB6648_redo V 13506487 1 C T 216 1.00 63 62 2 11 13 @..TtTttTtttTt point 0 nongenic 5214 into R11G10.1a 2899 CB6648_redo V 13539850 1 G T 255 1.00 63 62 0 13 13 @tTTTtTttttTTt point 0 SNP none haw83676 2912 CB6648_redo V 13645668 1 G T 99 7.88 63 62 5 8 13 @T,TTT.TTT,T,. point 0 nongenic -11464 upstream H37A05.2 2913 CB6648_redo V 13645670 1 A C 102 8.25 63 62 6 7 13 @,CCC.CCC,C,.. point 0 nongenic -11466 upstream H37A05.2 2914 CB6648_redo V 13645672 1 A C 93 8.25 63 62 6 7 13 @,CCC.CCC,C,.. point 0 nongenic -11468 upstream H37A05.2 2917 CB6648_redo V 13645955 1 T C 255 1.00 63 62 2 20 22 @cccCcccccccCCcccC,c,Cc point 0 SNP none haw83752 2918 CB6648_redo V 13717171 1 T C 255 1.00 63 62 0 35 35 @CcCCccCcccccCCcccCCCCCCCCCcccCCCccc point 0 SNP none haw83786 2924 CB6648_redo V 13886659 1 T C 255 1.00 63 62 0 27 27 @CcCcCCCCCCCCcCcccCccCcCCcac point 0 SNP none haw83916 2925 CB6648_redo V 13888688 1 A G 255 1.00 63 62 0 54 54 @GGGgGGgggGgGGgGGgGGGGggGGGGGGGGGGGGgGgggGGGgGGgggGGGgg point 0 SNP none haw83918 2926 CB6648_redo V 13931064 1 A T 255 1.00 63 62 0 47 47 @TTTTTTtTtttTTttttttTTTTTtTttTTTTTttttTttttttTtt point 0 missense TTA->TTT[Leu->Phe] C06B3.14 2926 CB6648_redo V 13931064 1 A T 255 1.00 63 62 0 47 47 @TTTTTTtTtttTTttttttTTTTTtTttTTTTTttttTttttttTtt point 0 SNP none haw83931 2927 CB6648_redo V 13981688 1 G A 26 1.00 63 62 12 18 30 @A.AAA..A.AAAAA..AA..AAAA...AA. point 0 silent GTC->GTT[Val->Val] T26F2.2 2928 CB6648_redo V 14130699 1 A T 255 1.00 63 62 0 23 23 @tTtttTTtTTTttTTTTTtTTtt point 0 nongenic -1734 upstream H39E23.1c 2928 CB6648_redo V 14130699 1 A T 255 1.00 63 62 0 23 23 @tTtttTTtTTTttTTTTTtTTtt point 0 nongenic 10400 into H39E23.1a 2928 CB6648_redo V 14130699 1 A T 255 1.00 63 62 0 23 23 @tTtttTTtTTTttTTTTTtTTtt point 0 nongenic 1635 into H39E23.1b 2930 CB6648_redo V 14380092 1 A G 255 1.00 63 62 0 31 31 @GgGggGggGggGgGGGgGgGGgGggggggGg point 0 nongenic -1046 upstream F56A12.2 2930 CB6648_redo V 14380092 1 A G 255 1.00 63 62 0 31 31 @GgGggGggGggGgGGGgGgGGgGggggggGg point 0 nongenic -11726 upstream C15H11.10 2931 CB6648_redo V 14524337 1 C G 31 1.00 63 12 0 4 4 @Gggg point 0 nongenic -1028 upstream C53A5.3.1 2931 CB6648_redo V 14524337 1 C G 31 1.00 63 12 0 4 4 @Gggg point 0 nongenic -227 upstream C53A5.1.1 2931 CB6648_redo V 14524337 1 C G 31 1.00 63 12 0 4 4 @Gggg point 0 nongenic -228 upstream C53A5.1.3 2936 CB6648_redo V 14733448 1 G C 255 1.00 63 62 0 37 37 @CCCCccCcCcCCCCcCcCccCccCCCcCCcCCCcccc point 0 missense CTT->GTT[Leu->Val] Y50E8A.4a,Y50E8A.4b,Y50E8A.4c 2937 CB6648_redo V 14743838 1 T C 255 1.12 63 62 0 14 14 @CCCcCCCcCCccCC point 0 nongenic -2532 upstream Y50E8A.6 2943 CB6648_redo V 14744337 1 G C 198 2.19 40 62 0 18 18 @CcccCCCCCcCcCCCCCC point 0 nongenic -3031 upstream Y50E8A.6 2944 CB6648_redo V 14744895 1 T A 226 1.00 63 62 1 13 14 @AAAAaAa.AAAaAA point 0 nongenic -3589 upstream Y50E8A.6 2944 CB6648_redo V 14744895 1 T A 226 1.00 63 62 1 13 14 @AAAAaAa.AAAaAA point 0 nongenic 767 downstream Y50E8A.7 4606 CB6648_redo V 14768216 1 X X -1000 -999.99 -1000 -1000 11 -1 10 @..gg..gg.,g.ggg,... indel -1 nongenic -17779 upstream Y50E8A.17 4606 CB6648_redo V 14768216 1 X X -1000 -999.99 -1000 -1000 11 -1 10 @..gg..gg.,g.ggg,... indel -1 nongenic -5119 upstream Y50E8A.16 2994 CB6648_redo V 15434045 1 G A 104 1.81 63 62 23 52 75 @AA.A,A,AAAAAAAAA,,AAAA,,,AAAAA,AAAA,A,,,,,,AAaAA,a..A.Aaa,AAAAaaAAAaaAA..aA point 0 nongenic -1501 upstream T26H5.8 2995 CB6648_redo V 15434980 1 G C 67 1.00 63 62 50 99 149 @CCC.cccccccc,..cccC,CccC.ccC.c.cc,C.c,.,.c.....cc.C.c,CccccC.C,C.ccCcc,.c,C.cCCC,,ccCc,cCCc,Ccc,C.. point 0 SNP none haw85321 2996 CB6648_redo V 15479200 1 C A 255 1.00 63 62 0 35 35 @AaaaAaAAAAAaaaaAaAAAaaaAaaAAAAaAAAa point 0 SNP none haw85361 2997 CB6648_redo V 15581676 1 T C 255 1.62 63 62 0 38 38 @cccCCccccccCCccccCccCCccccCccCccCccCCC point 0 nongenic -3995 upstream B0391.10 2997 CB6648_redo V 15581676 1 T C 255 1.62 63 62 0 38 38 @cccCCccccccCCccccCccCCccccCccCccCccCCC point 0 nongenic -854 upstream F28F8.7 2998 CB6648_redo V 15581801 1 T C 255 1.00 63 62 0 12 12 @ccCccCCCCcCC point 0 nongenic -3870 upstream B0391.10 2998 CB6648_redo V 15581801 1 T C 255 1.00 63 62 0 12 12 @ccCccCCCCcCC point 0 nongenic -979 upstream F28F8.7 3000 CB6648_redo V 16093681 1 C A 100 1.50 63 24 1 5 6 @aaAAA. point 0 nongenic -1516 upstream F22B8.7 3001 CB6648_redo V 16093682 1 G C 64 1.56 63 24 2 5 7 @ccCCC., point 0 nongenic -1515 upstream F22B8.7 3002 CB6648_redo V 16093684 1 A G 25 1.69 63 62 3 3 6 @GGG.,, point 0 nongenic -1513 upstream F22B8.7 3003 CB6648_redo V 16393797 1 G C 255 1.00 63 62 0 42 42 @ccccCCCcCccCccCcCccccccccCccccCCccccCccccC point 0 missense GAC->GAG[Asp->Glu] F13A7.2 3004 CB6648_redo V 16420522 1 G A 255 1.00 63 62 0 47 47 @AaAAAAaAAAaAAaaaAAaAAAaAAAaaAaaaAAAAAaAAaAaAaAA point 0 SNP none haw88457 4613 CB6648_redo V 16460134 1 X X -1000 -999.99 -1000 -1000 11 -7 4 @,,..,.,,,.. indel -1 SNP none uCE5-2399 3009 CB6648_redo V 16525299 1 A T 181 5.00 63 62 0 9 9 @TTTTTTTTt point 0 nongenic -1831 upstream F36D3.8 3009 CB6648_redo V 16525299 1 A T 181 5.00 63 62 0 9 9 @TTTTTTTTt point 0 nongenic -3055 upstream F36D3.13 3020 CB6648_redo V 16707959 1 T C 9 8.50 63 62 86 98 184 @,C,,C,,CCCC,C..CCCCC,,Cc.cCCC,,cCCCCCCCCC,CCCCCC,CCC.,CCCccCCC,CCCCCCCCC,,C,,CCCCCcCCCCCCCC.C,,.,cC point 0 nongenic -1339 upstream Y70C5C.2 3032 CB6648_redo V 16709145 1 G A 14 8.31 0 0 0 44 44 @AAAAaAAAAAAaAAAAAAAAaAAAaAAAAaaAAAAAaAAaAAaa point 0 nongenic -2525 upstream Y70C5C.2 3033 CB6648_redo V 16723977 1 T C 255 1.00 63 62 0 32 32 @CCCcCCcCcCcCCCccCCCcCCccCcCcCccc point 0 nongenic -160 upstream Y70C5C.6a,Y70C5C.6b 3033 CB6648_redo V 16723977 1 T C 255 1.00 63 62 0 32 32 @CCCcCCcCcCcCCCccCCCcCCccCcCcCccc point 0 nongenic -3209 upstream T25E12.14 3034 CB6648_redo V 16723993 1 G C 255 1.00 63 62 0 25 25 @CCCcCCccCcCcCcccccccccccc point 0 nongenic -176 upstream Y70C5C.6a,Y70C5C.6b 3034 CB6648_redo V 16723993 1 G C 255 1.00 63 62 0 25 25 @CCCcCCccCcCcCcccccccccccc point 0 nongenic -3193 upstream T25E12.14 3035 CB6648_redo V 16733914 1 A C 255 1.00 63 62 0 42 42 @CccCcCcCcccCcccCCccCCCCCcCCCcCCCCccCccCCCc point 0 missense TTT->GTT[Phe->Val] T25E12.10 3035 CB6648_redo V 16733914 1 A C 255 1.00 63 62 0 42 42 @CccCcCcCcccCcccCCccCCCCCcCCCcCCCCccCccCCCc point 0 SNP none haw89342,snp_T25E12[1] 3036 CB6648_redo V 16816476 1 T C 255 1.00 63 62 0 41 41 @CCcCCccccCccCcCcCCCCcCCccCCcCccCcccCCCcCc point 0 nongenic 938 into T20B3.1 3037 CB6648_redo V 16874737 1 C G 188 1.00 63 14 1 9 10 @GGggggGGG, point 0 nongenic -1110 upstream F49A5.10 3037 CB6648_redo V 16874737 1 C G 188 1.00 63 14 1 9 10 @GGggggGGG, point 0 nongenic -3277 upstream F49A5.6 3037 CB6648_redo V 16874737 1 C G 188 1.00 63 14 1 9 10 @GGggggGGG, point 0 nongenic 690 into F49A5.8 3040 CB6648_redo V 17040175 1 C A 108 7.00 50 20 0 5 5 @aaaaa point 0 nongenic -2386 upstream F28B1.1 3040 CB6648_redo V 17040175 1 C A 108 7.00 50 20 0 5 5 @aaaaa point 0 nongenic -4254 upstream F49H6.11 3041 CB6648_redo V 17040210 1 T C 125 5.25 63 62 0 4 4 @CCCC point 0 nongenic -2351 upstream F28B1.1 3041 CB6648_redo V 17040210 1 T C 125 5.25 63 62 0 4 4 @CCCC point 0 nongenic -4289 upstream F49H6.11 3047 CB6648_redo V 17378169 1 G A 255 1.00 63 62 0 45 45 @AAaAAAAAaaAAAaaaaAaaaAaaAaAAaAaaAaAAAAaAAaaaa point 0 SNP none haw90646 3048 CB6648_redo V 17385237 1 T C 7 4.94 0 14 11 12 23 @.......CCCCC.Cc..ccC.CC point 0 nongenic -10405 upstream T27C5.1 3050 CB6648_redo V 17469462 1 T A 140 1.00 63 46 1 7 8 @aaAaAAA, point 0 nongenic -241 upstream F20E11.17 3050 CB6648_redo V 17469462 1 T A 140 1.00 63 46 1 7 8 @aaAaAAA, point 0 nongenic 728 downstream F08E10.1 3050 CB6648_redo V 17469462 1 T A 140 1.00 63 46 1 7 8 @aaAaAAA, point 0 nongenic 902 downstream F20E11.6 3051 CB6648_redo V 17619073 1 C G 255 1.25 63 62 0 41 41 @GGgggGgGGggggGGggGgGGgGgGGgGGGGgGGggggggg point 0 nongenic -1088 upstream Y6G8.8 3051 CB6648_redo V 17619073 1 C G 255 1.25 63 62 0 41 41 @GGgggGgGGggggGGggGgGGgGgGGgGGGGgGGggggggg point 0 nongenic -2183 upstream Y6G8.6 3055 CB6648_redo V 17738056 1 T C 48 9.44 63 44 0 15 15 @CcCCCCCCCCCCCCC point 0 nongenic -7706 upstream W06D12.2 3055 CB6648_redo V 17738056 1 T C 48 9.44 63 44 0 15 15 @CcCCCCCCCCCCCCC point 0 nongenic 1805 into W06D12.1 3056 CB6648_redo V 17738078 1 A C 42 7.19 63 32 0 17 17 @CCCCCCCCCCCCCCCCC point 0 nongenic -7728 upstream W06D12.2 3056 CB6648_redo V 17738078 1 A C 42 7.19 63 32 0 17 17 @CCCCCCCCCCCCCCCCC point 0 nongenic 1783 into W06D12.1 3057 CB6648_redo V 17738120 1 T C 13 5.81 0 12 0 5 5 @CCCCC point 0 nongenic -7770 upstream W06D12.2 3057 CB6648_redo V 17738120 1 T C 13 5.81 0 12 0 5 5 @CCCCC point 0 nongenic 1741 into W06D12.1 3058 CB6648_redo V 17738152 1 T C 12 5.00 0 12 0 4 4 @CCCC point 0 nongenic -7802 upstream W06D12.2 3058 CB6648_redo V 17738152 1 T C 12 5.00 0 12 0 4 4 @CCCC point 0 nongenic 1709 into W06D12.1 3059 CB6648_redo V 17738184 1 T C 41 6.69 35 36 0 14 14 @CCCCCCCCCCCCCC point 0 nongenic -7834 upstream W06D12.2 3059 CB6648_redo V 17738184 1 T C 41 6.69 35 36 0 14 14 @CCCCCCCCCCCCCC point 0 nongenic 1677 into W06D12.1 3060 CB6648_redo V 17738206 1 T C 68 7.56 63 30 0 16 16 @CCCCCCCCCCCCCCCC point 0 nongenic -7856 upstream W06D12.2 3060 CB6648_redo V 17738206 1 T C 68 7.56 63 30 0 16 16 @CCCCCCCCCCCCCCCC point 0 nongenic 1655 into W06D12.1 3061 CB6648_redo V 17738238 1 T C 180 7.94 63 62 0 21 21 @CCCCCCCCCCCCCCCCCcCCC point 0 nongenic -7888 upstream W06D12.2 3061 CB6648_redo V 17738238 1 T C 180 7.94 63 62 0 21 21 @CCCCCCCCCCCCCCCCCcCCC point 0 nongenic 1623 into W06D12.1 3062 CB6648_redo V 17835640 1 G T 255 1.00 63 62 0 50 50 @ttttTTtTTTTtTttTTtTTtTTttttTTTTTttTTttTTtTTtTttttT point 0 SNP none haw91665 3063 CB6648_redo V 17867118 1 T G 155 1.56 63 62 0 12 12 @gGggggGggggg point 0 nongenic -11158 upstream Y59A8A.3.1 3063 CB6648_redo V 17867118 1 T G 155 1.56 63 62 0 12 12 @gGggggGggggg point 0 nongenic -4254 upstream Y59A8A.2 3063 CB6648_redo V 17867118 1 T G 155 1.56 63 62 0 12 12 @gGggggGggggg point 0 nongenic 3502 into Y59A8A.1 3064 CB6648_redo V 17867263 1 A G 68 4.06 63 62 6 7 13 @g,G,g,,Gggg,, point 0 nongenic -11303 upstream Y59A8A.3.1 3064 CB6648_redo V 17867263 1 A G 68 4.06 63 62 6 7 13 @g,G,g,,Gggg,, point 0 nongenic -4109 upstream Y59A8A.2 3064 CB6648_redo V 17867263 1 A G 68 4.06 63 62 6 7 13 @g,G,g,,Gggg,, point 0 nongenic 3357 into Y59A8A.1 3073 CB6648_redo V 17885927 1 A G 16 2.25 0 16 0 9 9 @GGGGGGGGG point 0 nongenic 3026 into C06H5.6 3084 CB6648_redo V 17886212 1 G A 12 1.75 0 12 0 4 4 @aaaa point 0 nongenic 2741 into C06H5.6 3087 CB6648_redo V 17898272 1 G A 255 6.00 63 62 0 41 41 @AAAaAAAAAAAaAAAAAAAAaAaaaAAAAAAaAAAAAAAaA point 0 nongenic -1517 upstream C06H5.1 3087 CB6648_redo V 17898272 1 G A 255 6.00 63 62 0 41 41 @AAAaAAAAAAAaAAAAAAAAaAaaaAAAAAAaAAAAAAAaA point 0 nongenic -1523 upstream C06H5.2 3094 CB6648_redo V 17950254 1 T A 255 1.00 63 62 0 34 34 @AAaAaaAAAAAaAAaaAAaAaaAaAAaAaAaAaa point 0 SNP none haw91922 3095 CB6648_redo V 17961088 1 T A 255 2.19 63 62 0 42 42 @aAAAaAaaaAAaaAAaaaAaAaAaAAAaAaaaaAAaAAAaAa point 0 nongenic 5728 into Y59A8B.23a,Y59A8B.23b 3096 CB6648_redo V 17972070 1 G T 255 1.25 63 62 3 32 35 @,,tT,TtTTTTttTttttTTTTTtTTttttTttTt point 0 nongenic -14154 upstream Y59A8B.21 3096 CB6648_redo V 17972070 1 G T 255 1.25 63 62 3 32 35 @,,tT,TtTTTTttTttttTTTTTtTTttttTttTt point 0 nongenic -5254 upstream Y59A8B.23a,Y59A8B.23b 3096 CB6648_redo V 17972070 1 G T 255 1.25 63 62 3 32 35 @,,tT,TtTTTTttTttttTTTTTtTTttttTttTt point 0 nongenic 3512 into Y59A8B.22.1 3096 CB6648_redo V 17972070 1 G T 255 1.25 63 62 3 32 35 @,,tT,TtTTTTttTttttTTTTTtTTttttTttTt point 0 nongenic 3570 into Y59A8B.22.2 3097 CB6648_redo V 17972080 1 G T 255 1.25 63 62 3 34 37 @T,,tTTT,ttTttttTTTTTtTTttttTttTtttttt point 0 nongenic -14144 upstream Y59A8B.21 3097 CB6648_redo V 17972080 1 G T 255 1.25 63 62 3 34 37 @T,,tTTT,ttTttttTTTTTtTTttttTttTtttttt point 0 nongenic -5264 upstream Y59A8B.23a,Y59A8B.23b 3097 CB6648_redo V 17972080 1 G T 255 1.25 63 62 3 34 37 @T,,tTTT,ttTttttTTTTTtTTttttTttTtttttt point 0 nongenic 3522 into Y59A8B.22.1 3097 CB6648_redo V 17972080 1 G T 255 1.25 63 62 3 34 37 @T,,tTTT,ttTttttTTTTTtTTttttTttTtttttt point 0 nongenic 3580 into Y59A8B.22.2 3098 CB6648_redo V 17975954 1 T A 72 1.69 63 62 3 9 12 @AAAAAaaaa,,. point 0 nongenic -10270 upstream Y59A8B.21 3098 CB6648_redo V 17975954 1 T A 72 1.69 63 62 3 9 12 @AAAAAaaaa,,. point 0 nongenic -9138 upstream Y59A8B.23a,Y59A8B.23b 3098 CB6648_redo V 17975954 1 T A 72 1.69 63 62 3 9 12 @AAAAAaaaa,,. point 0 nongenic 4096 into Y59A8B.22.1,Y59A8B.22.2 3099 CB6648_redo V 17989158 1 A T 52 1.00 63 62 3 7 10 @,..tTttttt point 0 nongenic -9108 upstream Y59A8B.22.1,Y59A8B.22.2 3099 CB6648_redo V 17989158 1 A T 52 1.00 63 62 3 7 10 @,..tTttttt point 0 nongenic 2934 into Y59A8B.21 3100 CB6648_redo V 17989159 1 T C 108 1.00 63 52 2 7 9 @..cCccccc point 0 nongenic -9109 upstream Y59A8B.22.1,Y59A8B.22.2 3100 CB6648_redo V 17989159 1 T C 108 1.00 63 52 2 7 9 @..cCccccc point 0 nongenic 2935 into Y59A8B.21 4617 CB6648_redo V 17989160 1 X X -1000 -999.99 -1000 -1000 9 -4 5 @...,..... indel -1 SNP none uCE5-2743 3102 CB6648_redo V 18022415 1 G A 255 1.00 63 62 0 83 83 @AAAAaAaaaAaaAAaAaaAAaAAaaAAAAaaAaAAaaAaAaaaAAaaAaaAAaaaaaaAAaAAAAaAaaAaAAaAaAAAAaAA point 0 nongenic -27 upstream Y59A8B.6.1 3102 CB6648_redo V 18022415 1 G A 255 1.00 63 62 0 83 83 @AAAAaAaaaAaaAAaAaaAAaAAaaAAAAaaAaAAaaAaAaaaAAaaAaaAAaaaaaaAAaAAAAaAaaAaAAaAaAAAAaAA point 0 nongenic -29 upstream Y59A8B.6.2 3102 CB6648_redo V 18022415 1 G A 255 1.00 63 62 0 83 83 @AAAAaAaaaAaaAAaAaaAAaAAaaAAAAaaAaAAaaAaAaaaAAaaAaaAAaaaaaaAAaAAAAaAaaAaAAaAaAAAAaAA point 0 nongenic -5122 upstream Y59A8B.4 160875 CB6648_redo V 18139744 148 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 783 to 931 bp into Y37H2A.10 3105 CB6648_redo V 18211054 1 G A 124 3.31 63 22 0 6 6 @aaAaAA point 0 nongenic -2002 upstream F16H6.7 3107 CB6648_redo V 18220489 1 G A 255 1.00 63 62 0 37 37 @AaAAAAaAAaaAaaAAaAaAAAaAAAAaAAAAaaaaA point 0 nongenic -4247 upstream F16H6.8 3107 CB6648_redo V 18220489 1 G A 255 1.00 63 62 0 37 37 @AaAAAAaAAaaAaaAAaAaAAAaAAAAaAAAAaaaaA point 0 nongenic 1777 into F16H6.9 3108 CB6648_redo V 18314059 1 G A 65 1.00 63 40 1 4 5 @,AAaA point 0 nongenic -4501 upstream B0462.3 3108 CB6648_redo V 18314059 1 G A 65 1.00 63 40 1 4 5 @,AAaA point 0 nongenic -8521 upstream Y51A2A.7 3109 CB6648_redo V 18314060 1 A C 79 1.00 63 62 1 5 6 @,CCcCC point 0 nongenic -4500 upstream B0462.3 3109 CB6648_redo V 18314060 1 A C 79 1.00 63 62 1 5 6 @,CCcCC point 0 nongenic -8522 upstream Y51A2A.7 3116 CB6648_redo V 18465979 1 G A 18 1.00 63 0 0 4 4 @aaaa point 0 nongenic 692 downstream ZK228.4a,ZK228.4b 3117 CB6648_redo V 18465992 1 G A 211 1.81 63 62 0 11 11 @aaaaAAAaaaa point 0 nongenic 705 downstream ZK228.4a,ZK228.4b 3118 CB6648_redo V 18465993 1 T G 201 1.81 63 62 0 11 11 @ggggGGGgggg point 0 nongenic 706 downstream ZK228.4a,ZK228.4b 3120 CB6648_redo V 18537035 1 C T 107 1.00 63 16 0 6 6 @TTtttT point 0 nongenic 3116 into Y51A2D.7a,Y51A2D.7b 3121 CB6648_redo V 18537037 1 G C 31 1.00 63 16 0 4 4 @cccC point 0 nongenic 3118 into Y51A2D.7a,Y51A2D.7b 3124 CB6648_redo V 18537057 1 A G 182 1.00 63 62 0 7 7 @GGggggG point 0 nongenic 3138 into Y51A2D.7a,Y51A2D.7b 3125 CB6648_redo V 18537058 1 G A 149 1.25 63 62 0 8 8 @AAaataAA point 0 nongenic 3139 into Y51A2D.7a,Y51A2D.7b 3128 CB6648_redo V 18656480 1 T C 255 1.00 63 62 1 32 33 @CCcCCCCcccCccCccccCcCccCCccccCCc. point 0 nongenic 324 into Y69H2.3c 3128 CB6648_redo V 18656480 1 T C 255 1.00 63 62 1 32 33 @CCcCCCCcccCccCccccCcCccCCccccCCc. point 0 nongenic 348 downstream Y69H2.12 3128 CB6648_redo V 18656480 1 T C 255 1.00 63 62 1 32 33 @CCcCCCCcccCccCccccCcCccCCccccCCc. point 0 nongenic 408 into Y69H2.3b 3142 CB6648_redo V 18683437 1 G T 19 5.00 0 16 0 6 6 @TTTttt point 0 nongenic 890 into Y69H2.10b 3143 CB6648_redo V 18720594 1 T A 255 1.00 63 62 0 18 18 @aAaAaaaaaaAAAaaaAa point 0 nongenic -770 upstream Y17D7C.2 3144 CB6648_redo V 18858714 1 C T 255 1.06 63 62 0 25 25 @tttttTttttttTtTTTtTttTTtt point 0 SNP none haw93705 3146 CB6648_redo V 18883478 1 C A 65 6.06 63 62 13 23 36 @,,,a,Aa.A,A,,aAAaaAa.A,,AaAAAAAaA,.A point 0 nongenic 11462 into Y80D3A.2.2 3146 CB6648_redo V 18883478 1 C A 65 6.06 63 62 13 23 36 @,,,a,Aa.A,A,,aAAaaAa.A,,AaAAAAAaA,.A point 0 nongenic 11463 into Y80D3A.2.1 3147 CB6648_redo V 18883481 1 A G 65 6.38 63 62 11 25 36 @,g,Gg.G,G,,gGGggGg.G,,GgGGGGGgG,.GGG point 0 nongenic 11459 into Y80D3A.2.2 3147 CB6648_redo V 18883481 1 A G 65 6.38 63 62 11 25 36 @,g,Gg.G,G,,gGGggGg.G,,GgGGGGGgG,.GGG point 0 nongenic 11460 into Y80D3A.2.1 3149 CB6648_redo V 18941842 1 A C 255 2.00 63 62 2 39 41 @cCCcc,cCcCCccCcCcCc,ccCccccccCCCcCcCCCCCC point 0 missense GAA->GCA[Glu->Ala] Y80D3A.8 3152 CB6648_redo V 18959114 1 A G 156 6.62 50 62 0 14 14 @ggggGgggGggggg point 0 nongenic -1842 upstream Y80D3A.9 3152 CB6648_redo V 18959114 1 A G 156 6.62 50 62 0 14 14 @ggggGgggGggggg point 0 nongenic 910 into Y39B6A.46 3153 CB6648_redo V 18959149 1 A G 255 8.12 63 62 0 35 35 @gggggggGggGgGGGggggggGGGGgggggggggg point 0 nongenic -1877 upstream Y80D3A.9 3153 CB6648_redo V 18959149 1 A G 255 8.12 63 62 0 35 35 @gggggggGggGgGGGggggggGGGGgggggggggg point 0 nongenic 945 into Y39B6A.46 3154 CB6648_redo V 18959246 1 A T 106 8.62 63 62 6 25 31 @.t.ttT.T..,TTTTTTTTtTTTTTTTTTTt point 0 nongenic -1974 upstream Y80D3A.9 3154 CB6648_redo V 18959246 1 A T 106 8.62 63 62 6 25 31 @.t.ttT.T..,TTTTTTTTtTTTTTTTTTTt point 0 nongenic 892 into Y39B6A.46 3156 CB6648_redo V 18959251 1 A G 138 9.50 63 62 5 22 27 @.G..,GGGGGGGG.GGGGGGGGGGtgg point 0 nongenic -1979 upstream Y80D3A.9 3156 CB6648_redo V 18959251 1 A G 138 9.50 63 62 5 22 27 @.G..,GGGGGGGG.GGGGGGGGGGtgg point 0 nongenic 887 into Y39B6A.46 3157 CB6648_redo V 18959538 1 C T 255 1.00 63 62 0 32 32 @TtTttttTtTtTTttttttttttttttttttt point 0 missense GAA->AAA[Glu->Lys] Y39B6A.46 3158 CB6648_redo V 18962810 1 C T 228 1.00 63 62 0 9 9 @TTttTTttt point 0 nongenic -2672 upstream Y39B6A.46 3158 CB6648_redo V 18962810 1 C T 228 1.00 63 62 0 9 9 @TTttTTttt point 0 nongenic 1745 into Y39B6A.43a,Y39B6A.43b 3159 CB6648_redo V 18962825 1 C T 126 1.00 63 2 0 4 4 @TTTT point 0 nongenic -2687 upstream Y39B6A.46 3159 CB6648_redo V 18962825 1 C T 126 1.00 63 2 0 4 4 @TTTT point 0 nongenic 1760 into Y39B6A.43a,Y39B6A.43b 3160 CB6648_redo V 18962826 1 T G 139 1.19 63 2 0 6 6 @GGGGGg point 0 nongenic -2688 upstream Y39B6A.46 3160 CB6648_redo V 18962826 1 T G 139 1.19 63 2 0 6 6 @GGGGGg point 0 nongenic 1761 into Y39B6A.43a,Y39B6A.43b 3161 CB6648_redo V 18965154 1 T A 255 1.00 63 62 0 44 44 @aaaAAaAAAaAAAAaaaaAAaaAAaAAaaAaAaaaAAAaaAaaa point 0 SNP none haw94014 3167 CB6648_redo V 19052087 1 T C 255 1.00 63 62 0 32 32 @cCCcCcCcccCcccccccccCcccccCccccc point 0 SNP none haw94226 3171 CB6648_redo V 19119922 1 T C 230 8.38 63 62 0 25 25 @ccccccccccccccccccccccccc point 0 nongenic -589 upstream Y39B6A.13 3171 CB6648_redo V 19119922 1 T C 230 8.38 63 62 0 25 25 @ccccccccccccccccccccccccc point 0 nongenic -7572 upstream Y39B6A.11 3171 CB6648_redo V 19119922 1 T C 230 8.38 63 62 0 25 25 @ccccccccccccccccccccccccc point 0 nongenic 335 into Y39B6A.12b 3171 CB6648_redo V 19119922 1 T C 230 8.38 63 62 0 25 25 @ccccccccccccccccccccccccc point 0 nongenic 368 into Y39B6A.12a 3172 CB6648_redo V 19187353 1 T C 255 1.00 63 62 0 17 17 @CCCCCcccccCCcCccc point 0 nongenic 512 into Y39B6A.48 3175 CB6648_redo V 19362470 1 T C 255 1.00 63 62 0 44 44 @cCCcCcccCCcCcccCcCCcCCcccCccCCCCCcccccCCcccc point 0 nongenic -13017 upstream C14B4.2 3175 CB6648_redo V 19362470 1 T C 255 1.00 63 62 0 44 44 @cCCcCcccCCcCcccCcCCcCCcccCccCCCCCcccccCCcccc point 0 nongenic -8096 upstream Y43F8A.1 3179 CB6648_redo V 19499424 1 G C 183 1.00 63 62 0 7 7 @cccCccc point 0 nongenic -3651 upstream Y43F8B.3a,Y43F8B.3b 3179 CB6648_redo V 19499424 1 G C 183 1.00 63 62 0 7 7 @cccCccc point 0 nongenic -3772 upstream Y43F8B.5 3180 CB6648_redo V 19506793 1 T A 255 1.00 63 62 0 12 12 @AAaAaAAAAaaA point 0 nongenic -11141 upstream Y43F8B.5 3180 CB6648_redo V 19506793 1 T A 255 1.00 63 62 0 12 12 @AAaAaAAAAaaA point 0 nongenic 3718 into Y43F8B.3a,Y43F8B.3b 3181 CB6648_redo V 19649737 1 G A 255 1.00 63 62 0 24 24 @AaAAaaaAAAAaAaaaAaaaaaAa point 0 nongenic 664 downstream Y43F8C.10 3197 CB6648_redo V 19754364 1 A T 9 1.00 63 46 3 3 6 @,.,TtT point 0 nongenic -2152 upstream W04E12.9 3197 CB6648_redo V 19754364 1 A T 9 1.00 63 46 3 3 6 @,.,TtT point 0 nongenic -3187 upstream W04E12.6 3197 CB6648_redo V 19754364 1 A T 9 1.00 63 46 3 3 6 @,.,TtT point 0 nongenic 964 into W04E12.8 3198 CB6648_redo V 19816962 1 C T 255 1.06 63 62 0 45 45 @TTTtttTttTTTtTtTtttttttTtTTTtTttTTTtTtttttTtt point 0 SNP none haw96009 3199 CB6648_redo V 19828951 1 T C 255 1.00 63 62 0 34 34 @CccCcCCCccCCCccccccCCccccCcCCCccCC point 0 silent CAA->CAG[Gln->Gln] Y116F11B.3.1,Y116F11B.3.2 3200 CB6648_redo V 19862667 1 A C 255 1.00 63 62 0 21 21 @CCCCCCcCCccCcccCCCCcC point 0 ncRNA none Y116F11B.9b 3200 CB6648_redo V 19862667 1 A C 255 1.00 63 62 0 21 21 @CCCCCCcCCccCcccCCCCcC point 0 SNP none haw96106 3201 CB6648_redo V 19868214 1 C G 255 1.00 63 62 0 33 33 @ggGGggGggGGgGGgggGGGgGGggGGggGGGG point 0 nongenic -267 upstream Y116F11B.9a 3201 CB6648_redo V 19868214 1 C G 255 1.00 63 62 0 33 33 @ggGGggGggGGgGGgggGGGgGGggGGggGGGG point 0 nongenic -9969 upstream Y116F11B.11 3206 CB6648_redo V 20122792 1 A G 42 1.00 63 22 0 4 4 @GGGG point 0 nongenic -2155 upstream Y113G7A.4a 3207 CB6648_redo V 20308943 1 C T 255 1.06 63 62 0 32 32 @TtTTtttTTtTttTtttTttTTTTtTtttttt point 0 nongenic -1755 upstream ZC15.10 3207 CB6648_redo V 20308943 1 C T 255 1.06 63 62 0 32 32 @TtTTtttTTtTttTtttTttTTTTtTtttttt point 0 nongenic 60 downstream ZC15.1 3209 CB6648_redo V 20337877 1 C T 255 1.00 63 62 0 30 30 @tTTTttTtttttTtttTtTTtTTttTttTt point 0 SNP none haw97199 3210 CB6648_redo V 20384799 1 C T 255 1.00 63 62 0 38 38 @TtTTTTtTTTTTTTTtTttTTTTTtTTTtTTttTtTTt point 0 missense CGG->CAG[Arg->Gln] K02E2.7 3214 CB6648_redo V 20508851 1 C A 255 1.00 63 62 0 51 51 @AAAaAAAAAaAAAAaAaAAaaAAAAaAaaaaAaAAaaAaAAaaAAaAAAaA point 0 nongenic -3790 upstream Y38H6C.4 3214 CB6648_redo V 20508851 1 C A 255 1.00 63 62 0 51 51 @AAAaAAAAAaAAAAaAaAAaaAAAAaAaaaaAaAAaaAaAAaaAAaAAAaA point 0 nongenic -5877 upstream Y38H6C.8 3214 CB6648_redo V 20508851 1 C A 255 1.00 63 62 0 51 51 @AAAaAAAAAaAAAAaAaAAaaAAAAaAaaaaAaAAaaAaAAaaAAaAAAaA point 0 nongenic 1120 into Y38H6C.5 3215 CB6648_redo V 20550701 1 C T 255 1.00 63 62 0 41 41 @tTtTttTttTttTTtTttTTTtTTtTttTTtttTttTtttT point 0 nongenic -3589 upstream Y38H6C.18 3215 CB6648_redo V 20550701 1 C T 255 1.00 63 62 0 41 41 @tTtTttTttTttTTtTttTTTtTTtTttTTtttTttTtttT point 0 nongenic 427 into Y38H6C.20 3216 CB6648_redo V 20730251 1 T G 255 1.00 63 62 0 17 17 @GGGGggGGGgGgggGgg point 0 missense AAT->ACT[Asn->Thr] W07A8.3.1,W07A8.3.2 3224 CB6648_redo X 5703 1 A T 169 1.19 63 40 0 6 6 @ttTTtt point 0 missense ATT->TTT[Ile->Phe] CE7X_3.1 3228 CB6648_redo X 106540 1 T A 4 2.56 0 24 8 15 23 @.A.aAA.AaA.aA,aaAa..A,a point 0 nongenic -1777 upstream Y73B3A.4 3228 CB6648_redo X 106540 1 T A 4 2.56 0 24 8 15 23 @.A.aAA.AaA.aA,aaAa..A,a point 0 nongenic 430 downstream Y73B3A.5 3229 CB6648_redo X 106668 1 G T 23 3.75 63 38 4 5 9 @Ttt.t.T.. point 0 nongenic -1905 upstream Y73B3A.4 3229 CB6648_redo X 106668 1 G T 23 3.75 63 38 4 5 9 @Ttt.t.T.. point 0 nongenic 302 downstream Y73B3A.5 3230 CB6648_redo X 106701 1 A G 208 2.25 50 62 3 13 16 @...ggGgggGGgGgGg point 0 nongenic -1938 upstream Y73B3A.4 3230 CB6648_redo X 106701 1 A G 208 2.25 50 62 3 13 16 @...ggGgggGGgGgGg point 0 nongenic 269 downstream Y73B3A.5 3231 CB6648_redo X 161175 1 G T 255 6.62 63 62 0 52 52 @TTtttttTtttttttttTttTTtTtTtttttTTTtttTtTtttTtttttTtt point 0 nongenic -3814 upstream Y73B3A.10 3232 CB6648_redo X 187274 1 C G 255 1.00 63 62 0 59 59 @GGgGggGGgGGGGGGgGGggGggggGGggGggGggGgGgGGGGGggGgGGggGgGGGGg point 0 SNP none haw98538 3233 CB6648_redo X 289841 1 G C 255 5.12 63 62 2 24 26 @CcCCCCCCcCCcCCCCcccccc,c,c point 0 nongenic -3316 upstream Y47C4A.1 3233 CB6648_redo X 289841 1 G C 255 5.12 63 62 2 24 26 @CcCCCCCCcCCcCCCCcccccc,c,c point 0 nongenic -7406 upstream R57.2 3234 CB6648_redo X 289852 1 G C 255 7.56 63 62 4 29 33 @CCcCCcCCCCcccccc,c,c,CccCcc.CcccC point 0 nongenic -3327 upstream Y47C4A.1 3234 CB6648_redo X 289852 1 G C 255 7.56 63 62 4 29 33 @CCcCCcCCCCcccccc,c,c,CccCcc.CcccC point 0 nongenic -7395 upstream R57.2 3240 CB6648_redo X 299633 1 T A 255 1.00 63 62 0 31 31 @aAAAAAaaaAAAaaaaaaAaAaaaaAaaAAa point 0 SNP none haw98564 3241 CB6648_redo X 320955 1 T G 105 1.81 63 62 1 6 7 @ggggGG. point 0 nongenic -1567 upstream M02E1.3 3241 CB6648_redo X 320955 1 T G 105 1.81 63 62 1 6 7 @ggggGG. point 0 nongenic -9631 upstream M02E1.2 3242 CB6648_redo X 320956 1 C T 94 2.31 63 62 1 4 5 @ttTT. point 0 nongenic -1566 upstream M02E1.3 3242 CB6648_redo X 320956 1 C T 94 2.31 63 62 1 4 5 @ttTT. point 0 nongenic -9632 upstream M02E1.2 3245 CB6648_redo X 341454 1 G C 255 1.00 63 62 0 22 22 @cCcccccCccCCCCCccccCcC point 0 nongenic -221 upstream C04E7.4 3246 CB6648_redo X 346995 1 G T 201 1.31 63 62 0 7 7 @tTttTtt point 0 nongenic -6624 upstream C04E7.2 3246 CB6648_redo X 346995 1 G T 201 1.31 63 62 0 7 7 @tTttTtt point 0 nongenic -705 upstream C04E7.3 3247 CB6648_redo X 347000 1 G T 166 1.00 63 40 0 5 5 @ttTtt point 0 nongenic -6619 upstream C04E7.2 3247 CB6648_redo X 347000 1 G T 166 1.00 63 40 0 5 5 @ttTtt point 0 nongenic -710 upstream C04E7.3 3249 CB6648_redo X 347042 1 G T 193 1.00 63 62 0 8 8 @ttttTtTt point 0 nongenic -6577 upstream C04E7.2 3249 CB6648_redo X 347042 1 G T 193 1.00 63 62 0 8 8 @ttttTtTt point 0 nongenic -752 upstream C04E7.3 3250 CB6648_redo X 348115 1 C A 255 1.00 63 62 0 36 36 @AaaaaaAaaAaaaAaaaAAAAaAAaAAAaAaAAAaa point 0 SNP none haw98580 3254 CB6648_redo X 365026 1 T G 74 1.00 63 62 1 3 4 @ggG. point 0 nongenic -7209 upstream R04A9.2 3255 CB6648_redo X 379726 1 G C 168 8.56 63 8 2 10 12 @CCcccCCcCc,. point 0 nongenic 844 into R04A9.3 3256 CB6648_redo X 379727 1 A G 102 7.38 63 8 5 9 14 @GGgggG,gGg,.,, point 0 nongenic 843 into R04A9.3 3257 CB6648_redo X 382890 1 C G 255 1.00 63 62 0 29 29 @GGgGggGgGggGGgggGGGgggGGGgggG point 0 nongenic -179 upstream R04A9.4 3258 CB6648_redo X 424545 1 T C 255 1.94 63 62 0 48 48 @cccCCcCcccCCcCcccCccCcccccCcCCccCcCCcCCCCCcCcccC point 0 nongenic 1240 into ZK1193.4 3259 CB6648_redo X 424576 1 T C 255 2.12 63 62 0 44 44 @CccCcCCcCCCCCcCcccCCCCcCCcCCCCccccccCcCCccCc point 0 SNP none haw98625 3260 CB6648_redo X 424587 1 T C 255 1.75 63 62 0 40 40 @CcccCCCCcCCcCCCCccccccCcCCccCccccCcCCcCC point 0 SNP none haw98626 3261 CB6648_redo X 424629 1 T C 255 1.00 63 62 0 35 35 @CcCCcCCcCCcccCccccccccCcccccccCcCCC point 0 nongenic 1324 into ZK1193.4 3262 CB6648_redo X 424765 1 G T 255 4.50 63 62 0 58 58 @TtTtTTtTtttTTTTTtTTTTtTTTttttTTtttttTtTTTTtTtTtTTTTTTtTTTt point 0 SNP none haw98627 3263 CB6648_redo X 425164 1 T C 42 1.00 63 2 0 4 4 @cccg point 0 nongenic 1240 into ZK1193.4 160880 CB6648_redo X 425408 53 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 943 to 996 bp into ZK1193.4 3272 CB6648_redo X 425547 1 C G 255 1.00 63 62 0 34 34 @GGGGGGGGGgGGGGgGGGGGggGgGggGGGgGGg point 0 nongenic 857 into ZK1193.4 3273 CB6648_redo X 443404 1 C G 201 3.50 38 62 0 14 14 @GgGgGggggggggg point 0 nongenic -9602 upstream ZK1193.5a,ZK1193.5b 3274 CB6648_redo X 486102 1 A G 255 1.00 63 62 0 55 55 @GGGGggGGGGgGggGGGgGgGggggGgGGGgGgGGGGGGgggGGgggGggGGGGg point 0 SNP none haw98666 3275 CB6648_redo X 488781 1 A C 255 9.25 63 62 0 21 21 @GccCCccccccCCcccCcCcC point 0 nongenic -915 upstream F38G1.2 3276 CB6648_redo X 488806 1 G T 255 2.31 63 62 0 23 23 @TtttTtTtTttTttttttTTtTt point 0 SNP none haw98668 3277 CB6648_redo X 491245 1 T C 33 1.00 63 62 5 8 13 @,.,,.cCccCCCC point 0 nongenic -1992 upstream B0310.1b 3277 CB6648_redo X 491245 1 T C 33 1.00 63 62 5 8 13 @,.,,.cCccCCCC point 0 nongenic 1031 into F38G1.2 3278 CB6648_redo X 491868 1 C A 255 1.00 63 62 0 37 37 @aaAAaaAaAAAAAaaaAAAAAAAAaAAaAaAAaAaaa point 0 SNP none haw98673 3291 CB6648_redo X 538182 1 A G 211 1.06 63 62 0 13 13 @ggggggggggggg point 0 nongenic -2345 upstream F28C10.3 3291 CB6648_redo X 538182 1 A G 211 1.06 63 62 0 13 13 @ggggggggggggg point 0 nongenic -4926 upstream F28C10.1 3291 CB6648_redo X 538182 1 A G 211 1.06 63 62 0 13 13 @ggggggggggggg point 0 nongenic 996 into F28C10.4 3294 CB6648_redo X 817619 1 A T 255 1.00 63 62 0 32 32 @TTTTTTTtTTtTTtTtTtTttTttTTtTTTtT point 0 SNP none haw98919 4634 CB6648_redo X 872120 0 X X -1000 -999.99 -1000 -1000 2 2 4 @.,ggG indel 0 nongenic -1040 upstream F56F10.4 4634 CB6648_redo X 872120 0 X X -1000 -999.99 -1000 -1000 2 2 4 @.,ggG indel 0 nongenic -396 upstream F56F10.1.1 4634 CB6648_redo X 872120 0 X X -1000 -999.99 -1000 -1000 2 2 4 @.,ggG indel 0 nongenic -482 upstream F56F10.1.2 3296 CB6648_redo X 1017350 1 T A 255 1.00 63 62 0 33 33 @aaaaaaaAaaAAAaaaaaaAaaAaAaaaaAaaa point 0 missense AAC->ATC[Asn->Ile] F55A4.2 3297 CB6648_redo X 1047732 1 C T 255 1.00 63 62 0 50 50 @TTtTTTtTTTttTTTtttTtTttTTttTttTTTTTTtTtttTttttttTt point 0 nongenic -1527 upstream F55A4.8a 3297 CB6648_redo X 1047732 1 C T 255 1.00 63 62 0 50 50 @TTtTTTtTTTttTTTtttTtTttTTttTttTTTTTTtTtttTttttttTt point 0 nongenic -6479 upstream K03E6.3 3298 CB6648_redo X 1073732 1 G T 255 1.00 63 62 0 37 37 @tTttTTTttTtTTTtttTtTTTtttttttTtTTtTTT point 0 SNP none haw99047 3299 CB6648_redo X 1133524 1 T A 255 1.00 63 62 0 36 36 @AaAAaAAaaaAAaaAAAAAAAaAAAaAAAAAAaaaA point 0 SNP none haw99081 3300 CB6648_redo X 1133556 1 T A 255 1.00 63 62 0 36 36 @AAaAAAaAAAAAAaaaAAAaaAaaaaaaAAaAAaaa point 0 SNP none haw99082 3302 CB6648_redo X 1198526 1 A G 11 1.00 63 62 7 7 14 @,.,,.,,GgGGGgg point 0 nongenic -47 upstream T13G4.5 3304 CB6648_redo X 1226077 1 G C 207 1.00 63 62 0 8 8 @ccccCccc point 0 SNP none haw99127 3305 CB6648_redo X 1239148 1 C T 255 1.00 63 62 0 37 37 @tTtttTTtttTTtTTTTtTttttttTtTttttTttTt point 0 SNP none haw99128 3306 CB6648_redo X 1294827 1 C G 255 1.00 63 62 0 38 38 @gGgGGgGGGGGGGGGGGGGgGgGGggGGggGGGGgGGG point 0 nongenic -446 upstream C52B11.3 3307 CB6648_redo X 1308534 1 C A 255 1.00 63 62 0 28 28 @aAaaAaaAaaaaAaaaAaaaAAAAaaAa point 0 SNP none haw99198 3308 CB6648_redo X 1333863 1 A C 208 1.00 63 62 0 8 8 @CcccCCCC point 0 SNP none haw99214 3309 CB6648_redo X 1472305 1 G T 255 1.00 63 62 0 40 40 @tttTtttTTtTttttTttttttTTTtttttTtTTttTTTT point 0 SNP none haw99409 3313 CB6648_redo X 1519786 1 C A 216 1.00 63 62 0 8 8 @AAAAaAAA point 0 nongenic 1698 into F09E10.8a,F09E10.8b 3314 CB6648_redo X 1519787 1 C A 217 1.00 63 62 0 9 9 @AAAAaAAAA point 0 nongenic 1697 into F09E10.8a,F09E10.8b 3315 CB6648_redo X 1604340 1 G T 161 1.00 63 62 0 6 6 @tttttt point 0 nongenic -561 upstream H11E01.3 3317 CB6648_redo X 1615121 1 C A 36 1.00 63 0 0 4 4 @AAaa point 0 silent CCC->CCA[Pro->Pro] H11E01.3 3321 CB6648_redo X 1615136 1 C T 143 1.00 63 0 0 5 5 @TtttT point 0 silent TTC->TTT[Phe->Phe] H11E01.3 3331 CB6648_redo X 1717742 1 C A 255 1.00 63 62 0 24 24 @AAaaaaaAaAAaAAaAAaAAaAAA point 0 SNP none haw99773 3337 CB6648_redo X 1884561 1 T A 3 5.75 0 2 10 16 26 @,AAAAaA,aA.AaaAAAAA,,..,.. point 0 nongenic -7620 upstream B0294.3 3341 CB6648_redo X 1885828 1 C T 3 6.62 0 0 11 50 61 @ttttt.ttttttttTT,TTttTTt.tttTttTtt.tttTt,.TttTttTtT,t,.,Tttt. point 0 nongenic -6353 upstream B0294.3 3347 CB6648_redo X 2122994 1 A T 255 1.00 63 62 0 42 42 @TtTTtttttttttTtTTtttttTTTTTTTttTTTTTTTTTTT point 0 nongenic -1937 upstream F53B1.7 3347 CB6648_redo X 2122994 1 A T 255 1.00 63 62 0 42 42 @TtTTtttttttttTtTTtttttTTTTTTTttTTTTTTTTTTT point 0 nongenic 417 downstream F53B1.8 3348 CB6648_redo X 2165879 1 A G 59 1.00 63 62 1 4 5 @GGGg. point 0 silent GTA->GTG[Val->Val] F48B9.3 3349 CB6648_redo X 2370397 1 A C 180 1.00 63 62 0 8 8 @CcCCCCCc point 0 nongenic -4460 upstream T24D8.6 3349 CB6648_redo X 2370397 1 A C 180 1.00 63 62 0 8 8 @CcCCCCCc point 0 nongenic -5594 upstream F47G3.3 3350 CB6648_redo X 2370398 1 C A 166 1.00 63 62 0 6 6 @AAAAAa point 0 nongenic -4461 upstream T24D8.6 3350 CB6648_redo X 2370398 1 C A 166 1.00 63 62 0 6 6 @AAAAAa point 0 nongenic -5593 upstream F47G3.3 3354 CB6648_redo X 2428302 1 T C 35 0.00 63 34 0 4 4 @cccC point 0 nongenic -802 upstream T07D1.1a,T07D1.1b 3354 CB6648_redo X 2428302 1 T C 35 0.00 63 34 0 4 4 @cccC point 0 nongenic -851 upstream T07D1.1c 3355 CB6648_redo X 2428303 1 C T 35 0.00 63 34 0 4 4 @tttT point 0 nongenic -803 upstream T07D1.1a,T07D1.1b 3355 CB6648_redo X 2428303 1 C T 35 0.00 63 34 0 4 4 @tttT point 0 nongenic -852 upstream T07D1.1c 3359 CB6648_redo X 2522234 1 C A 129 1.00 63 56 3 7 10 @aAAaaaA,,, point 0 nongenic -6922 upstream K02E10.8a,K02E10.8b 3360 CB6648_redo X 2522237 1 A T 57 1.00 63 62 4 6 10 @TTtttT,,,. point 0 nongenic -6925 upstream K02E10.8a,K02E10.8b 3363 CB6648_redo X 2826263 1 A T 69 1.00 63 62 4 7 11 @,,..ttTTttt point 0 nongenic -12143 upstream C14A11.6 3363 CB6648_redo X 2826263 1 A T 69 1.00 63 62 4 7 11 @,,..ttTTttt point 0 nongenic 559 into C14A11.7 4647 CB6648_redo X 2893761 0 X X -1000 -999.99 -1000 -1000 6 -1 5 @,,.,,.aAAa indel 0 nongenic -1213 downstream F52B10.3 4647 CB6648_redo X 2893761 0 X X -1000 -999.99 -1000 -1000 6 -1 5 @,,.,,.aAAa indel 0 nongenic -2275 upstream B0410.3 4647 CB6648_redo X 2893761 0 X X -1000 -999.99 -1000 -1000 6 -1 5 @,,.,,.aAAa indel 0 nongenic -805 upstream B0410.1 3364 CB6648_redo X 2894432 1 A T 255 3.38 63 62 0 36 36 @TTTTtTTtTTTTTTTTtttTtTtTTTTTtTTTTttt point 0 SNP none snp_B0410[1] 3365 CB6648_redo X 2899577 1 G C 26 1.00 63 18 1 4 5 @CCcC, point 0 nongenic -1367 upstream F52B10.3 3365 CB6648_redo X 2899577 1 G C 26 1.00 63 18 1 4 5 @CCcC, point 0 nongenic -9970 upstream F52B10.1 3366 CB6648_redo X 2899578 1 C G 18 1.00 63 26 1 3 4 @GgG, point 0 nongenic -1368 upstream F52B10.3 3366 CB6648_redo X 2899578 1 C G 18 1.00 63 26 1 3 4 @GgG, point 0 nongenic -9969 upstream F52B10.1 4649 CB6648_redo X 3007736 0 X X -1000 -999.99 -1000 -1000 49 -45 4 @,......,,,,,,,,....,......,,,,...,.....,,,.......tt indel 5 nongenic -1755 upstream Y48D7A.1 4649 CB6648_redo X 3007736 0 X X -1000 -999.99 -1000 -1000 49 -45 4 @,......,,,,,,,,....,......,,,,...,.....,,,.......tt indel 5 nongenic -3940 upstream Y41G9A.6 3372 CB6648_redo X 3027787 1 C G 255 2.31 63 62 0 36 36 @GGgGGgggGGggGGggggGggGGGggggGggggggg point 0 SNP none haw101125 3373 CB6648_redo X 3102869 1 A C 84 1.00 63 52 0 6 6 @CCccCC point 0 nongenic -644 upstream F52E4.8 3373 CB6648_redo X 3102869 1 A C 84 1.00 63 52 0 6 6 @CCccCC point 0 nongenic 372 downstream K10B3.5 3374 CB6648_redo X 3158187 1 C T 127 1.00 63 10 0 5 5 @TtTTt point 0 nongenic -1742 upstream C15C7.2.1 3374 CB6648_redo X 3158187 1 C T 127 1.00 63 10 0 5 5 @TtTTt point 0 nongenic -5733 upstream C15C7.5 3375 CB6648_redo X 3158207 1 C A 255 1.00 63 62 0 14 14 @AAaaAaAAAAAAAA point 0 nongenic -1722 upstream C15C7.2.1 3375 CB6648_redo X 3158207 1 C A 255 1.00 63 62 0 14 14 @AAaaAaAAAAAAAA point 0 nongenic -5753 upstream C15C7.5 3378 CB6648_redo X 3207501 1 C T 96 2.38 63 62 0 5 5 @Ttttt point 0 nongenic 692 into F28B4.4 3384 CB6648_redo X 3225118 1 T G 189 1.00 63 62 0 7 7 @GggGGGG point 0 nongenic -4758 upstream F28B4.2a 3385 CB6648_redo X 3237694 1 A G 255 1.00 63 62 0 49 49 @gGGggGggggGGgGgggGGGGgggGGggGGgggGGGggGGggGGGggGg point 0 missense TTT->TCT[Phe->Ser] F40F4.6 3385 CB6648_redo X 3237694 1 A G 255 1.00 63 62 0 49 49 @gGGggGggggGGgGgggGGGGgggGGggGGgggGGGggGGggGGGggGg point 0 SNP none haw101350 4652 CB6648_redo X 3293918 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @,,.,,.tTT indel 0 nongenic -3728 upstream K09C4.2 3386 CB6648_redo X 3367002 1 C G 255 1.00 63 62 0 38 38 @gggGggGgggGggGGgGGgGGggGgGGgGGGGgggggg point 0 nongenic -1945 upstream ZK563.2 3386 CB6648_redo X 3367002 1 C G 255 1.00 63 62 0 38 38 @gggGggGgggGggGGgGGgGGggGgGGgGGGGgggggg point 0 nongenic -4519 upstream ZK816.5 3387 CB6648_redo X 3367003 1 G C 255 1.00 63 62 0 39 39 @cccCccCcccCccCCcCCcCCccCcCCcCCCCccccccc point 0 nongenic -1944 upstream ZK563.2 3387 CB6648_redo X 3367003 1 G C 255 1.00 63 62 0 39 39 @cccCccCcccCccCCcCCcCCccCcCCcCCCCccccccc point 0 nongenic -4520 upstream ZK816.5 4654 CB6648_redo X 3376415 0 X X -1000 -999.99 -1000 -1000 3 1 4 @..,GGgg indel 0 nongenic -1685 upstream ZK563.4a,ZK563.4b 4654 CB6648_redo X 3376415 0 X X -1000 -999.99 -1000 -1000 3 1 4 @..,GGgg indel 0 nongenic 774 downstream ZK563.5 3388 CB6648_redo X 3408399 1 T C 255 1.81 63 62 0 35 35 @cCcCCCCcCcCCCCCccCcCCCccCCcCcCcCcCC point 0 silent ATT->ATC[Ile->Ile] C04F6.1.1,C04F6.1.2,C04F6.1.3 3389 CB6648_redo X 3520397 1 C G 89 1.00 63 62 0 6 6 @GAggGG point 0 nongenic -14043 upstream C12D12.5 3389 CB6648_redo X 3520397 1 C G 89 1.00 63 62 0 6 6 @GAggGG point 0 nongenic -8402 upstream F56B6.5a,F56B6.5b 3390 CB6648_redo X 3631398 1 C G 11 2.75 63 62 12 15 27 @gGGGgggGaG,,,,,,,g,,A,,Ga,G point 0 nongenic 525 downstream C18B2.1 3391 CB6648_redo X 3631566 1 G A 35 2.75 63 62 46 75 121 @,..,,a.,AA.,...A,,.A,.,,,..,,.,,.,,.,,,,,a,A,,a,.a,aaaaAAAAaaAAAAAAAaaaAAAAAAaAAAAAaaAAAAAAAAAAaaaa point 0 nongenic 693 downstream C18B2.1 3391 CB6648_redo X 3631566 1 G A 35 2.75 63 62 46 75 121 @,..,,a.,AA.,...A,,.A,.,,,..,,.,,.,,.,,,,,a,A,,a,.a,aaaaAAAAaaAAAAAAAaaaAAAAAAaAAAAAaaAAAAAAAAAAaaaa point 0 nongenic 976 downstream R11G1.3 3392 CB6648_redo X 3631690 1 C G 44 3.62 63 62 102 137 239 @g.,,,,,,,.,GG,,,g.,G,.,,,,.g,,,G,,Gg,G,,g,,,,,,GGGG,,G.g,G,GgG,,gg,,g.GG,G,G.GG,,,gGGGGg.GGGGgGGgGg point 0 SNP none haw101541 3393 CB6648_redo X 3631792 1 G T 168 1.06 63 62 32 135 167 @.,ttT,tttttttTTTTTtt.tttTttTTttT,TTtttttTTt.T,TttTTTTttttttt.TTttTtttTTtttTtT,t,,,Ttt,tt,.tt,,tt.tt point 0 SNP none haw101542 3394 CB6648_redo X 3653458 1 T C 255 1.00 63 62 0 21 21 @cCCCCCCcCCCCCCCCCCCCc point 0 SNP none haw101553 3401 CB6648_redo X 3796657 1 T C 15 1.00 63 38 1 6 7 @C,ccccc point 0 nongenic -1276 upstream F35A5.5 3401 CB6648_redo X 3796657 1 T C 15 1.00 63 38 1 6 7 @C,ccccc point 0 nongenic -1506 upstream F35A5.3 3402 CB6648_redo X 3811996 1 T G 161 1.69 63 62 6 6 12 @ggGgGg..,,., point 0 nongenic 4398 into F35A5.1 3404 CB6648_redo X 3812199 1 A G 36 1.38 63 62 10 10 20 @.gGg...GG..G,.GGg.g. point 0 nongenic 4195 into F35A5.1 3405 CB6648_redo X 3882478 1 T C 22 1.00 63 52 1 9 10 @CCCc.ccccc point 0 nongenic -1690 upstream F47F2.1b 3405 CB6648_redo X 3882478 1 T C 22 1.00 63 52 1 9 10 @CCCc.ccccc point 0 nongenic -9201 upstream ZC64.4 3407 CB6648_redo X 3902119 1 A C 134 1.00 63 62 0 6 6 @cccccc point 0 nongenic -2451 upstream T22B2.4a 3407 CB6648_redo X 3902119 1 A C 134 1.00 63 62 0 6 6 @cccccc point 0 nongenic -6460 upstream F47F2.3 3408 CB6648_redo X 3903048 1 T C 181 1.00 63 62 0 6 6 @ccCCCc point 0 nongenic -1522 upstream T22B2.4a 3408 CB6648_redo X 3903048 1 T C 181 1.00 63 62 0 6 6 @ccCCCc point 0 nongenic -7389 upstream F47F2.3 3409 CB6648_redo X 3924055 1 A G 255 1.00 63 62 0 29 29 @GggGGgggGgGGGgggGGgggggggGGgg point 0 nongenic -2005 upstream T22B2.1 3409 CB6648_redo X 3924055 1 A G 255 1.00 63 62 0 29 29 @GggGGgggGgGGGgggGGgggggggGGgg point 0 nongenic 841 downstream T22B2.2 3410 CB6648_redo X 4025107 1 A G 255 1.00 63 62 0 33 33 @GGgGgGGgGgggGGggGGGgGGGGggGGGgGGG point 0 silent AAA->AAG[Lys->Lys] R02E12.8 3449 CB6648_redo X 4241735 1 A C 255 1.38 63 62 0 29 29 @cccccCccCCcccCCcccCcCCcCcCCcc point 0 SNP none haw101997 3450 CB6648_redo X 4241797 1 A G 107 2.00 63 62 3 4 7 @...gggg point 0 nongenic -5974 upstream W01H2.3a 3452 CB6648_redo X 4241827 1 T C 176 1.69 40 62 0 20 20 @CcccCCCCCcCCCcccCCCc point 0 nongenic -6004 upstream W01H2.3a 3453 CB6648_redo X 4241867 1 G T 188 2.81 40 62 27 40 67 @,,,ttt,,Tt,tttt,,,tttt.t,tTT,ttt,,T,TT,tTtTt,T,tT,,T,,,,,T,tTttT,tT point 0 nongenic -6044 upstream W01H2.3a 3454 CB6648_redo X 4241902 1 T C 15 3.12 1 2 0 32 32 @CcCccCCcCCCCCCCCCCCCCCCCCCCCCCcC point 0 nongenic -6079 upstream W01H2.3a 3455 CB6648_redo X 4241950 1 A G 20 2.12 37 16 0 7 7 @GgGgGgg point 0 nongenic -6127 upstream W01H2.3a 3457 CB6648_redo X 4242071 1 T C 179 2.88 63 62 0 18 18 @CCCcCCcCcCCccccccc point 0 nongenic -6248 upstream W01H2.3a 3458 CB6648_redo X 4242094 1 G A 90 3.00 63 62 0 8 8 @aaaAAAAA point 0 nongenic -6271 upstream W01H2.3a 3459 CB6648_redo X 4242110 1 A C 64 2.12 50 62 2 8 10 @CCCCCCc,,C point 0 nongenic -6287 upstream W01H2.3a 4668 CB6648_redo X 4512910 0 X X -1000 -999.99 -1000 -1000 3 1 4 @,,.GGg indel 0 nongenic -1161 upstream C07A12.5a,C07A12.5b 3462 CB6648_redo X 4513922 1 C T 255 1.00 63 62 0 22 22 @tttttTttttttttttTTtTtT point 0 SNP none snp_F46H6[6] 4670 CB6648_redo X 4550017 0 X X -1000 -999.99 -1000 -1000 4 0 4 @.,.,cc indel 1 nongenic -4648 upstream C07A12.1b 3463 CB6648_redo X 4550018 1 A C 12 1.00 63 62 0 6 6 @CcCggG point 0 nongenic -4646 upstream C07A12.1b 3464 CB6648_redo X 4556553 1 T G 28 1.00 63 62 3 3 6 @...GGg point 0 nongenic -555 upstream C07A12.1c 3464 CB6648_redo X 4556553 1 T G 28 1.00 63 62 3 3 6 @...GGg point 0 nongenic 1888 into C07A12.1a 3464 CB6648_redo X 4556553 1 T G 28 1.00 63 62 3 3 6 @...GGg point 0 nongenic 1889 into C07A12.1b 3465 CB6648_redo X 4556555 1 G T 130 1.00 63 28 2 7 9 @..TTtTTTt point 0 nongenic -553 upstream C07A12.1c 3465 CB6648_redo X 4556555 1 G T 130 1.00 63 28 2 7 9 @..TTtTTTt point 0 nongenic 1890 into C07A12.1a 3465 CB6648_redo X 4556555 1 G T 130 1.00 63 28 2 7 9 @..TTtTTTt point 0 nongenic 1891 into C07A12.1b 3469 CB6648_redo X 4577121 1 T G 79 1.00 63 26 1 4 5 @ggGg, point 0 nongenic -2357 upstream C05E11.3 3470 CB6648_redo X 4577179 1 A T 255 1.00 63 62 0 39 39 @TtttTtTTtttttttttttTTtTtTTTtTTTtTTTtTTt point 0 SNP none haw102400 3471 CB6648_redo X 4578097 1 T C 255 1.00 63 62 0 35 35 @CcCCCcCccCCcccccCCcccCCCcCCcCCCccCc point 0 nongenic -1381 upstream C05E11.3 4672 CB6648_redo X 4603454 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @....,Cc indel 0 inframe none T13H2.5a 3478 CB6648_redo X 4971580 1 C T 255 1.00 63 62 0 40 40 @tttttTttTTTtTtttTtTttTttttttTtTTTttTtTtT point 0 nongenic -699 upstream M03F4.7a 3478 CB6648_redo X 4971580 1 C T 255 1.00 63 62 0 40 40 @tttttTttTTTtTtttTtTttTttttttTtTTTttTtTtT point 0 nongenic -715 upstream M03F4.7b 3478 CB6648_redo X 4971580 1 C T 255 1.00 63 62 0 40 40 @tttttTttTTTtTtttTtTttTttttttTtTTTttTtTtT point 0 nongenic 989 downstream ZC8.6 3479 CB6648_redo X 4971581 1 A C 255 1.00 63 62 0 40 40 @cccccCccCCCcCcccCcCccCccccccCcCCCccCcCcC point 0 nongenic -700 upstream M03F4.7a 3479 CB6648_redo X 4971581 1 A C 255 1.00 63 62 0 40 40 @cccccCccCCCcCcccCcCccCccccccCcCCCccCcCcC point 0 nongenic -716 upstream M03F4.7b 3479 CB6648_redo X 4971581 1 A C 255 1.00 63 62 0 40 40 @cccccCccCCCcCcccCcCccCccccccCcCCCccCcCcC point 0 nongenic 988 downstream ZC8.6 3484 CB6648_redo X 5123322 1 T G 255 1.00 63 62 1 55 56 @gggGgGggGGGGgggggGgGgG.GggggGgggggGgGGggggGggGGggGgGGGGg point 0 nongenic -15637 upstream C31H2.1a,C31H2.1b 3484 CB6648_redo X 5123322 1 T G 255 1.00 63 62 1 55 56 @gggGgGggGGGGgggggGgGgG.GggggGgggggGgGGggggGggGGggGgGGGGg point 0 nongenic -6482 upstream C42D8.8b.1 3485 CB6648_redo X 5134151 1 C G 255 1.00 63 62 0 41 41 @GgGgggGgggGgGggggGgggggGggGggGggggGGGgGgg point 0 nongenic -17311 upstream C42D8.8b.1 3485 CB6648_redo X 5134151 1 C G 255 1.00 63 62 0 41 41 @GgGgggGgggGgGggggGgggggGggGggGggggGGGgGgg point 0 nongenic -4808 upstream C31H2.1a,C31H2.1b 3486 CB6648_redo X 5134152 1 G C 255 1.00 63 62 0 43 43 @cCcccCcccCcCccccCcccccCccCccCccccCCCcCccCcc point 0 nongenic -17312 upstream C42D8.8b.1 3486 CB6648_redo X 5134152 1 G C 255 1.00 63 62 0 43 43 @cCcccCcccCcCccccCcccccCccCccCccccCCCcCccCcc point 0 nongenic -4807 upstream C31H2.1a,C31H2.1b 3488 CB6648_redo X 5195550 1 G C 67 1.00 63 20 1 7 8 @CCCcccC. point 0 nongenic -2201 upstream T03G11.1 3488 CB6648_redo X 5195550 1 G C 67 1.00 63 20 1 7 8 @CCCcccC. point 0 nongenic -6541 upstream T03G11.8 3494 CB6648_redo X 5432160 1 T C 255 1.00 63 62 0 42 42 @CCCcccCcCCCCCcccccCccCcCCccCccccCCcCcCcCcc point 0 missense GTC->GCC[Val->Ala] C41A3.1 4680 CB6648_redo X 5508058 4 X X -1000 -999.99 -1000 -1000 12 -11 1 @,..,,..,,.., indel -4 SNP none uCE6-931 3496 CB6648_redo X 5526944 1 A C 32 1.00 63 36 3 5 8 @cCccC,., point 0 missense TGT->GGT[Cys->Gly] C54G7.3a 3497 CB6648_redo X 5819246 1 G C 13 1.00 63 10 1 3 4 @,cCC point 0 nongenic -13361 upstream F13D11.3.1 3497 CB6648_redo X 5819246 1 G C 13 1.00 63 10 1 3 4 @,cCC point 0 nongenic -2990 upstream F13D11.2a 4684 CB6648_redo X 5819247 1 X X -1000 -999.99 -1000 -1000 4 -1 3 @,.,, indel -1 SNP none uCE6-959 3498 CB6648_redo X 5857436 1 T G 255 1.00 63 62 0 25 25 @gggGGggGgGggGgGggGggGGgGg point 0 nongenic -3221 upstream W06B11.4 3498 CB6648_redo X 5857436 1 T G 255 1.00 63 62 0 25 25 @gggGGggGgGggGgGggGggGGgGg point 0 nongenic -5280 upstream F49E10.5 3499 CB6648_redo X 5883992 1 C T 255 1.00 63 62 0 45 45 @tttTtTttTTtttTTttTTTtTttTttTtttttTtTtTtTtTtTt point 0 SNP none haw103817 3500 CB6648_redo X 6059575 1 C T 134 1.00 63 2 2 7 9 @..tTTtttT point 0 missense CCC->TCC[Pro->Ser] C45B2.5.1,C45B2.5.2 4687 CB6648_redo X 6075482 0 X X -1000 -999.99 -1000 -1000 5 -2 3 @,.,..GGG indel 0 five_prime_UTR none C45B2.4b.1 3501 CB6648_redo X 6107174 1 T A 255 1.00 63 62 0 56 56 @AaAaaAaAaAaAAAAAAAAAaAAaAaaaaaAaaAAaaaAAaAAAAaAaAAaAaAaa point 0 nongenic 289 into C15H9.7 3502 CB6648_redo X 6224848 1 C T 30 1.00 63 62 3 6 9 @,..TTTTtt point 0 nongenic -10976 upstream C14F11.2 3504 CB6648_redo X 6287233 1 C T 3 5.81 0 18 2 6 8 @T,t.tttt point 0 nongenic -1102 upstream T07H6.4 3504 CB6648_redo X 6287233 1 C T 3 5.81 0 18 2 6 8 @T,t.tttt point 0 nongenic -5851 upstream T07H6.2 3504 CB6648_redo X 6287233 1 C T 3 5.81 0 18 2 6 8 @T,t.tttt point 0 nongenic 810 into T07H6.5 3505 CB6648_redo X 6287251 1 T A 21 5.88 0 2 0 9 9 @AAaaaaaaa point 0 nongenic -1120 upstream T07H6.4 3505 CB6648_redo X 6287251 1 T A 21 5.88 0 2 0 9 9 @AAaaaaaaa point 0 nongenic -5833 upstream T07H6.2 3505 CB6648_redo X 6287251 1 T A 21 5.88 0 2 0 9 9 @AAaaaaaaa point 0 nongenic 828 into T07H6.5 3510 CB6648_redo X 6287365 1 T A 80 3.31 50 62 0 6 6 @aaaaaa point 0 nongenic -1234 upstream T07H6.4 3510 CB6648_redo X 6287365 1 T A 80 3.31 50 62 0 6 6 @aaaaaa point 0 nongenic -5719 upstream T07H6.2 3510 CB6648_redo X 6287365 1 T A 80 3.31 50 62 0 6 6 @aaaaaa point 0 nongenic 942 into T07H6.5 160894 CB6648_redo X 6287459 347 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3732 to 4079 bp into T07H6.5 3515 CB6648_redo X 6412638 1 A T 255 1.00 63 62 0 32 32 @TTTttTTTtTtTttTTttttTttttttttTtT point 0 SNP none haw104221 3519 CB6648_redo X 6792031 1 G C 255 1.00 63 62 0 42 42 @cCcCCcCCCCCCcCCCccCCcccCCCCcCcccccCccCCcCc point 0 missense GAG->GAC[Glu->Asp] H22K11.1 3520 CB6648_redo X 6833268 1 G A 29 1.00 63 14 3 3 6 @a,A,.A point 0 nongenic -1409 upstream F41B4.2b.1 3520 CB6648_redo X 6833268 1 G A 29 1.00 63 14 3 3 6 @a,A,.A point 0 nongenic 1924 into F41B4.2a 3520 CB6648_redo X 6833268 1 G A 29 1.00 63 14 3 3 6 @a,A,.A point 0 nongenic 1953 into F41B4.2b.2 4694 CB6648_redo X 6833278 0 X X -1000 -999.99 -1000 -1000 5 -2 3 @.,a,a,, indel 5 nongenic -1419 upstream F41B4.2b.1 4694 CB6648_redo X 6833278 0 X X -1000 -999.99 -1000 -1000 5 -2 3 @.,a,a,, indel 5 nongenic -1914 downstream F41B4.2a 4694 CB6648_redo X 6833278 0 X X -1000 -999.99 -1000 -1000 5 -2 3 @.,a,a,, indel 5 nongenic -1943 downstream F41B4.2b.2 4696 CB6648_redo X 6917594 0 X X -1000 -999.99 -1000 -1000 3 2 5 @...GgGgG indel 0 nongenic -3096 downstream F14B8.1b.2 4696 CB6648_redo X 6917594 0 X X -1000 -999.99 -1000 -1000 3 2 5 @...GgGgG indel 0 nongenic -312 downstream F14B8.1b.1 4696 CB6648_redo X 6917594 0 X X -1000 -999.99 -1000 -1000 3 2 5 @...GgGgG indel 0 nongenic -3351 downstream F14B8.1a 4701 CB6648_redo X 7037469 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @,,..,ggggg indel 2 nongenic -13109 upstream B0403.2 4701 CB6648_redo X 7037469 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @,,..,ggggg indel 2 nongenic -1430 upstream R173.3 3559 CB6648_redo X 7070737 1 A C 10 1.62 63 2 4 15 19 @..c.cc.cccccccccccc point 0 nongenic -2223 upstream B0403.4 3559 CB6648_redo X 7070737 1 A C 10 1.62 63 2 4 15 19 @..c.cc.cccccccccccc point 0 nongenic 740 downstream B0403.6 3560 CB6648_redo X 7077720 1 T C 185 5.62 63 62 85 170 255 @CCCCC,,C,CCCCCcccccCCCCCCCCCcccccc.cccccccccccc.ccccc.CCC,,CC,CCCCCCCCcc.cccc,.c..,CcC,,,.,CC...,.. point 0 nongenic -2432 upstream B0403.6 3560 CB6648_redo X 7077720 1 T C 185 5.62 63 62 85 170 255 @CCCCC,,C,CCCCCcccccCCCCCCCCCcccccc.cccccccccccc.ccccc.CCC,,CC,CCCCCCCCcc.cccc,.c..,CcC,,,.,CC...,.. point 0 nongenic -7596 upstream Y1B5A.1 3561 CB6648_redo X 7077771 1 T A 21 6.44 63 62 118 137 255 @CCCCCCCCCCCCACCCcc.cccCCCCCCCCACCCCCCCCCCCCCccaccccaccccCCCCC,CCCCACCCCCC.cccc.ccaCAACCCCACAccccccc point 0 nongenic -2483 upstream B0403.6 3561 CB6648_redo X 7077771 1 T A 21 6.44 63 62 118 137 255 @CCCCCCCCCCCCACCCcc.cccCCCCCCCCACCCCCCCCCCCCCccaccccaccccCCCCC,CCCCACCCCCC.cccc.ccaCAACCCCACAccccccc point 0 nongenic -7545 upstream Y1B5A.1 3563 CB6648_redo X 7078149 1 A T 11 5.00 37 62 236 19 255 @,,........,,,,,,,,.........T,,,,,,,,,.....t..tt....ttt.,,,T,,,,,T.....t...........t...........,T,T, point 0 nongenic -2861 upstream B0403.6 3563 CB6648_redo X 7078149 1 A T 11 5.00 37 62 236 19 255 @,,........,,,,,,,,.........T,,,,,,,,,.....t..tt....ttt.,,,T,,,,,T.....t...........t...........,T,T, point 0 nongenic -7167 upstream Y1B5A.1 3565 CB6648_redo X 7078203 1 A G 55 8.62 0 62 112 143 255 @,,.gg.G,.ggggg...gggg,,gggg..g,,GGGGGgggggg.G,G.ggggggg.gg.gggggGG,,...gGGGggg.ggG.gggg.gggggggggG. point 0 nongenic -2915 upstream B0403.6 3565 CB6648_redo X 7078203 1 A G 55 8.62 0 62 112 143 255 @,,.gg.G,.ggggg...gggg,,gggg..g,,GGGGGgggggg.G,G.ggggggg.gg.gggggGG,,...gGGGggg.ggG.gggg.gggggggggG. point 0 nongenic -7113 upstream Y1B5A.1 3566 CB6648_redo X 7078298 1 G A 11 6.38 30 46 184 71 255 @ACA,AAA,AAAA,A,Aaaaaaaaaaa.A,,AA,AA,,,Aaa.aaacaaaaa.aa,,AA,A,A,AAaaaa...aaaaaa.AA,,Aaaaaaaa.a.,AA,, point 0 nongenic -3010 upstream B0403.6 3566 CB6648_redo X 7078298 1 G A 11 6.38 30 46 184 71 255 @ACA,AAA,AAAA,A,Aaaaaaaaaaa.A,,AA,AA,,,Aaa.aaacaaaaa.aa,,AA,A,A,AAaaaa...aaaaaa.AA,,Aaaaaaaa.a.,AA,, point 0 nongenic -7018 upstream Y1B5A.1 3568 CB6648_redo X 7078449 1 A T 26 6.25 63 62 209 46 255 @,,,,,..,T,,,tt......TT,T,,,.t..tt.T,T,T,,,,,,,..tt...tt..t.,,,,,,,,,,.ttt......tTt,,,TTt,,,,,,T,t.t point 0 nongenic -3161 upstream B0403.6 3568 CB6648_redo X 7078449 1 A T 26 6.25 63 62 209 46 255 @,,,,,..,T,,,tt......TT,T,,,.t..tt.T,T,T,,,,,,,..tt...tt..t.,,,,,,,,,,.ttt......tTt,,,TTt,,,,,,T,t.t point 0 nongenic -6867 upstream Y1B5A.1 3570 CB6648_redo X 7078503 1 A G 5 9.12 0 28 73 182 255 @G.tg,,,,gGgg,,,,GgggGggggggg,gGGg..gg,,g.g...gGGGgggg,GGGGggggg.g,GG,G,GGgggggGGGggggggGGGGGGGgg.gg point 0 nongenic -3215 upstream B0403.6 3570 CB6648_redo X 7078503 1 A G 5 9.12 0 28 73 182 255 @G.tg,,,,gGgg,,,,GgggGggggggg,gGGg..gg,,g.g...gGGGgggg,GGGGggggg.g,GG,G,GGgggggGGGggggggGGGGGGGgg.gg point 0 nongenic -6813 upstream Y1B5A.1 3571 CB6648_redo X 7078663 1 A G 3 9.19 0 30 66 189 255 @..,...ggG,.ggg..Gg.gg.,g.ggggGGg,GGGggggGG,gggGGGGGGGGGGGGgggggGGGGGggggggggGGGGGG,GGGGGggggg.gGGGG point 0 nongenic -3375 upstream B0403.6 3571 CB6648_redo X 7078663 1 A G 3 9.19 0 30 66 189 255 @..,...ggG,.ggg..Gg.gg.,g.ggggGGg,GGGggggGG,gggGGGGGGGGGGGGgggggGGGGGggggggggGGGGGG,GGGGGggggg.gGGGG point 0 nongenic -6653 upstream Y1B5A.1 3572 CB6648_redo X 7078698 1 T A 3 5.25 0 20 94 161 255 @g.,.a,,Aa,.A,,,,.a...a.a.a...,,,gg,,Gag,ggaaa,,g.aa,.gg.g.aa..a,,...a.a,,,gg.a..a.,,GG..g.gGgagaagA point 0 nongenic -3410 upstream B0403.6 3572 CB6648_redo X 7078698 1 T A 3 5.25 0 20 94 161 255 @g.,.a,,Aa,.A,,,,.a...a.a.a...,,,gg,,Gag,ggaaa,,g.aa,.gg.g.aa..a,,...a.a,,,gg.a..a.,,GG..g.gGgagaagA point 0 nongenic -6618 upstream Y1B5A.1 3575 CB6648_redo X 7078863 1 A G 10 9.12 19 44 84 171 255 @G.....,,.Ggggg...gg,Gg.gg,,gg,GGGGgg.gg,G,,,G,g.ggGGGggGGggggggGGGGGGgggGGGGGGgggggg.gggG,,GGGGGGGG point 0 nongenic -3575 upstream B0403.6 3575 CB6648_redo X 7078863 1 A G 10 9.12 19 44 84 171 255 @G.....,,.Ggggg...gg,Gg.gg,,gg,GGGGgg.gg,G,,,G,g.ggGGGggGGggggggGGGGGGgggGGGGGGgggggg.gggG,,GGGGGGGG point 0 nongenic -6453 upstream Y1B5A.1 3578 CB6648_redo X 7224737 1 A T 255 1.00 63 62 0 41 41 @tttTtTTTTTttTTtTtTtTTttTtTTtTtTTtTttTtTtt point 0 nongenic 2032 into ZK867.1a,ZK867.1b,ZK867.1c,ZK867.1d 3579 CB6648_redo X 7247377 1 C A 255 1.00 63 62 0 44 44 @AAAAAAAaAaaaAAaaaaaaaAAAaAaAAAaaaAAaAaAAAaAA point 0 SNP none haw104705 3581 CB6648_redo X 7310131 1 G C 20 3.25 63 16 3 7 10 @.,.cCCcCcC point 0 nongenic -1991 upstream T08A9.6 3581 CB6648_redo X 7310131 1 G C 20 3.25 63 16 3 7 10 @.,.cCCcCcC point 0 nongenic -306 upstream K03A1.6 3585 CB6648_redo X 7361569 1 A G 178 1.81 63 62 0 12 12 @GGGgggGGgGgg point 0 nongenic -3945 upstream C56G3.2 3590 CB6648_redo X 7436795 1 C T 23 1.00 63 62 2 4 6 @TtTt.. point 0 missense GGA->GAA[Gly->Glu] C01C10.2b 3591 CB6648_redo X 7527774 1 C T 255 1.00 63 62 0 26 26 @tttttttttttttttttTtttttttt point 0 SNP none haw104910 4709 CB6648_redo X 7559950 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @...,..cCc indel 0 nongenic -126 upstream F08C6.5 4709 CB6648_redo X 7559950 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @...,..cCc indel 0 nongenic -950 upstream PDB1.1b.1 3592 CB6648_redo X 7559951 1 G C 34 1.00 63 38 3 3 6 @Ccc.,. point 0 nongenic -124 upstream F08C6.5 3592 CB6648_redo X 7559951 1 G C 34 1.00 63 38 3 3 6 @Ccc.,. point 0 nongenic -951 upstream PDB1.1b.1 3593 CB6648_redo X 7566551 1 T C 255 1.00 63 62 0 42 42 @ccCcCcCCcccCcCcccccccCCccCcccCCcCCcccCcCCc point 0 missense GTT->GCT[Val->Ala] F08C6.3 3593 CB6648_redo X 7566551 1 T C 255 1.00 63 62 0 42 42 @ccCcCcCCcccCcCcccccccCCccCcccCCcCCcccCcCCc point 0 SNP none haw104923 3594 CB6648_redo X 7588883 1 T C 255 1.00 63 62 0 39 39 @cccCCccCCccCCCcCcccCCcCcccCccCCcCCcCcCc point 0 missense TCA->CCA[Ser->Pro] F08C6.1a.1,F08C6.1a.2,F08C6.1c 3597 CB6648_redo X 7644184 1 C G 73 1.00 63 62 1 5 6 @GGGGG, point 0 nongenic -6889 upstream F27D9.3 3597 CB6648_redo X 7644184 1 C G 73 1.00 63 62 1 5 6 @GGGGG, point 0 nongenic -7153 upstream F26A10.2 3598 CB6648_redo X 7649426 1 A G 117 1.00 63 62 1 8 9 @Gggggggg, point 0 nongenic -12395 upstream F26A10.2 3598 CB6648_redo X 7649426 1 A G 117 1.00 63 62 1 8 9 @Gggggggg, point 0 nongenic -1647 upstream F27D9.3 3599 CB6648_redo X 7671835 1 G C 116 1.00 63 26 2 6 8 @CccCCc,, point 0 nongenic -1099 upstream F27D9.2 3599 CB6648_redo X 7671835 1 G C 116 1.00 63 26 2 6 8 @CccCCc,, point 0 nongenic -2462 upstream F27D9.7 3600 CB6648_redo X 7671837 1 T G 26 1.00 63 62 3 5 8 @ggGGg,,, point 0 nongenic -1097 upstream F27D9.2 3600 CB6648_redo X 7671837 1 T G 26 1.00 63 62 3 5 8 @ggGGg,,, point 0 nongenic -2464 upstream F27D9.7 3601 CB6648_redo X 7719008 1 G C 24 1.00 63 62 8 8 16 @cCCCCccC....,,.. point 0 nongenic -205 upstream K09F5.6 3601 CB6648_redo X 7719008 1 G C 24 1.00 63 62 8 8 16 @cCCCCccC....,,.. point 0 nongenic -8349 upstream K09F5.4 3602 CB6648_redo X 7729211 1 C T 255 1.00 63 62 0 40 40 @tTTTtTtTtttTTtTTTTttTtTtTTTTTtttTtTTttTt point 0 silent CTC->CTT[Leu->Leu] K09F5.2 3603 CB6648_redo X 7764853 1 T A 184 5.19 63 62 0 14 14 @AAAAAaaaAaaaaa point 0 nongenic -6756 upstream C47C12.4 3603 CB6648_redo X 7764853 1 T A 184 5.19 63 62 0 14 14 @AAAAAaaaAaaaaa point 0 nongenic 1693 into C47C12.6.1,C47C12.6.2 3603 CB6648_redo X 7764853 1 T A 184 5.19 63 62 0 14 14 @AAAAAaaaAaaaaa point 0 nongenic 1703 into C47C12.6.3 3604 CB6648_redo X 7764866 1 C T 16 9.00 5 2 0 6 6 @tttttt point 0 nongenic -6769 upstream C47C12.4 3604 CB6648_redo X 7764866 1 C T 16 9.00 5 2 0 6 6 @tttttt point 0 nongenic 1706 into C47C12.6.1,C47C12.6.2 3604 CB6648_redo X 7764866 1 C T 16 9.00 5 2 0 6 6 @tttttt point 0 nongenic 1716 into C47C12.6.3 3611 CB6648_redo X 7771370 1 G A 220 1.12 63 62 0 14 14 @aaaaaaaaaaaaaa point 0 nongenic -13273 upstream C47C12.4 3611 CB6648_redo X 7771370 1 G A 220 1.12 63 62 0 14 14 @aaaaaaaaaaaaaa point 0 nongenic 3389 into C47C12.6.2 3611 CB6648_redo X 7771370 1 G A 220 1.12 63 62 0 14 14 @aaaaaaaaaaaaaa point 0 nongenic 3390 into C47C12.6.3 3611 CB6648_redo X 7771370 1 G A 220 1.12 63 62 0 14 14 @aaaaaaaaaaaaaa point 0 nongenic 3488 into C47C12.6.1 3612 CB6648_redo X 7771404 1 G A 186 1.31 63 62 0 9 9 @aaaaaaaaa point 0 nongenic -13307 upstream C47C12.4 3612 CB6648_redo X 7771404 1 G A 186 1.31 63 62 0 9 9 @aaaaaaaaa point 0 nongenic 3355 into C47C12.6.2 3612 CB6648_redo X 7771404 1 G A 186 1.31 63 62 0 9 9 @aaaaaaaaa point 0 nongenic 3356 into C47C12.6.3 3612 CB6648_redo X 7771404 1 G A 186 1.31 63 62 0 9 9 @aaaaaaaaa point 0 nongenic 3454 into C47C12.6.1 3613 CB6648_redo X 7771436 1 A T 50 1.44 63 46 0 9 9 @TTTTTTTTT point 0 nongenic -13339 upstream C47C12.4 3613 CB6648_redo X 7771436 1 A T 50 1.44 63 46 0 9 9 @TTTTTTTTT point 0 nongenic 3323 into C47C12.6.2 3613 CB6648_redo X 7771436 1 A T 50 1.44 63 46 0 9 9 @TTTTTTTTT point 0 nongenic 3324 into C47C12.6.3 3613 CB6648_redo X 7771436 1 A T 50 1.44 63 46 0 9 9 @TTTTTTTTT point 0 nongenic 3422 into C47C12.6.1 3614 CB6648_redo X 7823444 1 G T 94 1.00 63 0 0 5 5 @tttTT point 0 nongenic -149 upstream R03G5.1a.1,R03G5.1a.2,R03G5.1b.1,R03G5.1c.1,R03G5.1c.2,R03G5.1c.3 3614 CB6648_redo X 7823444 1 G T 94 1.00 63 0 0 5 5 @tttTT point 0 nongenic -151 upstream R03G5.1a.3,R03G5.1b.2,R03G5.1c.4,R03G5.1d 3616 CB6648_redo X 7823468 1 A T 156 1.00 63 0 0 5 5 @TTTtt point 0 nongenic -125 upstream R03G5.1a.1,R03G5.1a.2,R03G5.1b.1,R03G5.1c.1,R03G5.1c.2,R03G5.1c.3 3616 CB6648_redo X 7823468 1 A T 156 1.00 63 0 0 5 5 @TTTtt point 0 nongenic -127 upstream R03G5.1a.3,R03G5.1b.2,R03G5.1c.4,R03G5.1d 3617 CB6648_redo X 7841129 1 G T 162 1.00 63 62 1 7 8 @tTTtTTT, point 0 nongenic -1445 upstream C54D2.1 3618 CB6648_redo X 7872981 1 C A 255 1.00 63 62 0 43 43 @AaaaAAaAAAaAaAaAAaaAAaAaaaAaaAaAAaAaAaaAaAa point 0 SNP none haw105178 4717 CB6648_redo X 7984029 4 X X -1000 -999.99 -1000 -1000 7 -6 1 @...,,,,aAa indel -4 nongenic -1894 upstream F45E1.4 4717 CB6648_redo X 7984029 4 X X -1000 -999.99 -1000 -1000 7 -6 1 @...,,,,aAa indel -4 nongenic -2008 upstream F45E1.6.1 3619 CB6648_redo X 8026787 1 G T 38 1.00 63 62 2 3 5 @,,TtT point 0 three_prime_UTR none C34D10.2.1,C34D10.2.2 3620 CB6648_redo X 8029563 1 C T 255 1.00 63 62 0 32 32 @TttttttTTtTtTTtttTTtTTtTtttTtttt point 0 SNP none haw105378 3621 CB6648_redo X 8033820 1 G C 255 1.00 63 62 0 11 11 @cCccCCCCCcc point 0 missense GCC->GGC[Ala->Gly] C18A11.6 3622 CB6648_redo X 8076590 1 A T 194 1.00 63 62 0 9 9 @CCTTTtttt point 0 nongenic -1097 upstream C46F2.1 3624 CB6648_redo X 8207445 1 A C 16 1.00 63 14 2 3 5 @,,CcC point 0 nongenic -3718 upstream C17H11.6c.1 3625 CB6648_redo X 8207446 1 C T 14 1.00 63 16 2 3 5 @,,TtT point 0 nongenic -3719 upstream C17H11.6c.1 3626 CB6648_redo X 8274483 1 G C 10 1.00 63 62 2 5 7 @cccCC,, point 0 nongenic -3520 upstream F13B9.6 3626 CB6648_redo X 8274483 1 G C 10 1.00 63 62 2 5 7 @cccCC,, point 0 nongenic -614 upstream F13B9.5.1 3626 CB6648_redo X 8274483 1 G C 10 1.00 63 62 2 5 7 @cccCC,, point 0 nongenic -625 upstream F13B9.5.2 3627 CB6648_redo X 8325358 1 G T 33 1.00 63 62 3 5 8 @,.,TTtTt point 0 missense CAA->AAA[Gln->Lys] R09F10.8.1,R09F10.8.2 4727 CB6648_redo X 8374022 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @...,.AAA indel 0 nongenic -1999 upstream F40B5.1 4727 CB6648_redo X 8374022 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @...,.AAA indel 0 nongenic -393 downstream F40B5.3 3634 CB6648_redo X 8502322 1 G T 148 1.00 63 0 0 5 5 @TttTt point 0 nongenic -5491 upstream H03E18.1.1 3634 CB6648_redo X 8502322 1 G T 148 1.00 63 0 0 5 5 @TttTt point 0 nongenic 232 downstream T01B10.1 3640 CB6648_redo X 8602894 1 T A 33 1.19 63 62 8 9 17 @a..a..a.aaa.aAa,. point 0 nongenic 569 downstream H35N09.2 3640 CB6648_redo X 8602894 1 T A 33 1.19 63 62 8 9 17 @a..a..a.aaa.aAa,. point 0 nongenic 768 downstream F18E9.1 3641 CB6648_redo X 8602905 1 T G 176 1.25 63 44 0 9 9 @gggggGgGg point 0 nongenic 558 downstream H35N09.2 3641 CB6648_redo X 8602905 1 T G 176 1.25 63 44 0 9 9 @gggggGgGg point 0 nongenic 779 downstream F18E9.1 3643 CB6648_redo X 8603049 1 A G 255 1.00 63 62 0 13 13 @gGGGGGGGGGggg point 0 nongenic 414 downstream H35N09.2 3643 CB6648_redo X 8603049 1 A G 255 1.00 63 62 0 13 13 @gGGGGGGGGGggg point 0 nongenic 923 downstream F18E9.1 3644 CB6648_redo X 8629824 1 A C 255 1.00 63 62 0 47 47 @ccCcCcccCCCCccccCcCCCcccccccCCCcCCCCCCccccCcCcC point 0 SNP none haw105786 3651 CB6648_redo X 8769996 1 A G 75 1.00 63 62 2 7 9 @GGGGgg.g, point 0 nongenic -8791 upstream ZK721.4.1 3652 CB6648_redo X 8801882 1 A G 23 1.00 63 62 4 12 16 @.GG,,GGgg.gggggg point 0 three_prime_UTR none R04E5.8a 3653 CB6648_redo X 8941347 1 C T 51 1.00 63 62 3 5 8 @,,.Ttttt point 0 missense CGA->CAA[Arg->Gln] D1073.1a,D1073.1b 3654 CB6648_redo X 9171369 1 G T 255 1.00 63 62 0 42 42 @TTtttTttTttTTttttttTtTttTTTtttTtttTTTttTtt point 0 SNP none haw106181 3656 CB6648_redo X 9188219 1 C T 255 4.12 63 62 78 177 255 @,,tt...,,.,....,,..,....,,T,T,,..T,..,t..,....,..,,.t.,..,,t.TTTTTtTTTTttTTTtTTtTTTTTtTTtt,TTTTTttt point 0 SNP none haw106187 160896 CB6648_redo X 9189206 252 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 5107 to 5359 bp into Y81B9A.2 3660 CB6648_redo X 9198534 1 A G 24 1.00 63 20 2 6 8 @,.Gggggg point 0 nongenic -12636 upstream C35B8.4 3661 CB6648_redo X 9212879 1 T G 20 1.00 63 62 3 5 8 @,.,Ggggg point 0 nongenic -1007 upstream C35B8.3a.1 3661 CB6648_redo X 9212879 1 T G 20 1.00 63 62 3 5 8 @,.,Ggggg point 0 nongenic 798 downstream C35B8.4 4741 CB6648_redo X 9301361 0 X X -1000 -999.99 -1000 -1000 2 0 2 @..TT indel 0 nongenic -2296 upstream B0416.1 3662 CB6648_redo X 9328749 1 C T 27 1.00 63 62 5 8 13 @..,..ttttTtTT point 0 nongenic -2328 upstream T20B5.2 3662 CB6648_redo X 9328749 1 C T 27 1.00 63 62 5 8 13 @..,..ttttTtTT point 0 nongenic -9635 upstream F35G8.1 3663 CB6648_redo X 9460186 1 A C 206 2.00 63 62 16 38 54 @cCc,CCcc,c,,,cc,c,cc,,cccccCCc,ccC,c,ccc,,,CCcccCcC,Cc point 0 missense GAT->GAG[Asp->Glu] ZK899.5 3664 CB6648_redo X 9462102 1 T C 255 1.50 63 62 0 37 37 @CccccCcCcCCCCcCCCCCCCCCcCCcCCcCcCCcCc point 0 nongenic -1186 upstream ZK899.6 3664 CB6648_redo X 9462102 1 T C 255 1.50 63 62 0 37 37 @CccccCcCcCCCCcCCCCCCCCCcCCcCCcCcCCcCc point 0 nongenic -1234 upstream ZK899.5 3666 CB6648_redo X 9536669 1 T A 255 1.00 63 62 0 26 26 @aAAAAaaAaaaaaAAaaAaaaaaaAa point 0 SNP none haw106328 3667 CB6648_redo X 9703760 1 T A 255 1.12 63 62 0 48 48 @AAAAaaAaaAaaAAaAAaAaaaaAAaaAAAAAAAAAaaAAaaAAaAaA point 0 nongenic -3113 upstream F15G9.1a 3668 CB6648_redo X 9703853 1 T C 255 1.19 63 62 0 26 26 @CCCCcCCCCCCCCCCCCCCCCCCcCc point 0 nongenic -3020 upstream F15G9.1a 3669 CB6648_redo X 9774476 1 A G 255 1.00 63 62 0 31 31 @gggggggGgGGgggggggggggGgggggGGG point 0 SNP none haw106424 3670 CB6648_redo X 9861507 1 G T 255 1.00 63 62 0 71 71 @TTTtTTtTtttTtTtTTttTtTTtTTTTTTTTTTtTTtTttTTTTtttttTTtTtttTTtTTttttTTTTt point 0 missense AGT->ATT[Ser->Ile] R07B1.3 3670 CB6648_redo X 9861507 1 G T 255 1.00 63 62 0 71 71 @TTTtTTtTtttTtTtTTttTtTTtTTTTTTTTTTtTTtTttTTTTtttttTTtTtttTTtTTttttTTTTt point 0 SNP none haw106438 3671 CB6648_redo X 9882632 1 A C 255 1.00 63 62 0 33 33 @CcCcCCCCCCcCCccCcCcCCCcccCCCcCccc point 0 nongenic -1579 upstream F21G4.2 3671 CB6648_redo X 9882632 1 A C 255 1.00 63 62 0 33 33 @CcCcCCCCCCcCCccCcCcCCCcccCCCcCccc point 0 nongenic -491 upstream R07B1.12 3674 CB6648_redo X 9999591 1 A G 255 1.00 63 62 0 17 17 @gGgGgggggggggGgGG point 0 nongenic -1281 upstream F19C6.2a,F19C6.2b 3674 CB6648_redo X 9999591 1 A G 255 1.00 63 62 0 17 17 @gGgGgggggggggGgGG point 0 nongenic -478 upstream F19C6.1 4745 CB6648_redo X 10071939 0 X X -1000 -999.99 -1000 -1000 1 1 2 @,Ccc indel 0 nongenic -2221 upstream ZC373.4 4745 CB6648_redo X 10071939 0 X X -1000 -999.99 -1000 -1000 1 1 2 @,Ccc indel 0 nongenic 685 downstream ZC373.5 3675 CB6648_redo X 10130976 1 T G 255 1.00 63 62 0 36 36 @GggGGggGGggGgggggGGgGGGGGggggGgGgGgg point 0 SNP none haw106550 3676 CB6648_redo X 10179283 1 T C 67 1.00 63 62 1 4 5 @.cccc point 0 five_prime_UTR none F21A10.1b 3677 CB6648_redo X 10179285 1 C G 101 1.00 63 62 1 5 6 @.ggggg point 0 five_prime_UTR none F21A10.1b 3678 CB6648_redo X 10233035 1 C A 255 1.00 63 62 0 45 45 @aaAaaaAAAAaAAaAAaaaaAAAaaaAaAAAaAaaAaAaaAaaAA point 0 nongenic -4966 upstream C14H10.3a 3678 CB6648_redo X 10233035 1 C A 255 1.00 63 62 0 45 45 @aaAaaaAAAAaAAaAAaaaaAAAaaaAaAAAaAaaAaAaaAaaAA point 0 nongenic 700 downstream C14H10.1 3679 CB6648_redo X 10290548 1 G T 58 1.00 63 42 2 5 7 @TTttt., point 0 nongenic -12030 upstream F41E7.4 3679 CB6648_redo X 10290548 1 G T 58 1.00 63 42 2 5 7 @TTttt., point 0 nongenic -4880 upstream F41E7.3 3680 CB6648_redo X 10290549 1 A G 42 1.00 63 58 2 3 5 @ggg., point 0 nongenic -12029 upstream F41E7.4 3680 CB6648_redo X 10290549 1 A G 42 1.00 63 58 2 3 5 @ggg., point 0 nongenic -4881 upstream F41E7.3 3692 CB6648_redo X 10421428 1 G A 255 1.00 63 62 0 31 31 @AAaAaaAaaaaAAAAAAAaaaaaAAaaaAAa point 0 SNP none haw106854 3693 CB6648_redo X 10439131 1 C T 255 1.00 63 62 0 40 40 @TtttTTtttTtTtttttTtTTtTtTtttTttTTtTTTTTT point 0 SNP none haw106868 3694 CB6648_redo X 10473878 1 G A 255 1.00 63 62 0 28 28 @AAaAaaaaAaaAAAAAAaAAAAaAaAaa point 0 SNP none haw106890 3695 CB6648_redo X 10591190 1 G T 255 1.00 63 62 0 54 54 @tTtTttTttTTTTTtTtTTtttTtTttTTtttTtcTtTTTTTTTTTtTTTttTT point 0 SNP none haw106989 3696 CB6648_redo X 10594749 1 A C 71 1.00 63 62 1 4 5 @CCCc, point 0 nongenic -1484 upstream F57C7.3a 3696 CB6648_redo X 10594749 1 A C 71 1.00 63 62 1 4 5 @CCCc, point 0 nongenic -9990 upstream M79.4 3698 CB6648_redo X 10845087 1 T C 222 1.00 63 62 0 16 16 @CCCCCCCCCCCCCCCC point 0 nongenic -485 upstream C05A9.2 3699 CB6648_redo X 10896349 1 A G 255 1.00 63 62 0 39 39 @GggggGggGGGGGGGggGggGggGggGggggGGggGGGg point 0 nongenic -2 upstream F47B10.2 3701 CB6648_redo X 11158111 1 T A 255 1.00 63 62 0 47 47 @aaaaaaaAAAAAaaaaAaaaAAaaaaaAAaaaAaaaaAAAaaaaAaA point 0 SNP none pas45631 3702 CB6648_redo X 11310929 1 A T 46 1.00 63 62 14 33 47 @,,tt,,,ttttt,ttttttt,ttt,tt,tt,,,tttttt,tttt,tt point 0 nongenic -778 upstream F08G12.5 3703 CB6648_redo X 11310952 1 C T 32 1.00 63 62 15 26 41 @,tt,,,tttttt,tttt,tttt,,,t,tt,tt,tt,,tt,t point 0 nongenic -801 upstream F08G12.5 3704 CB6648_redo X 11423706 1 T C 105 1.00 63 52 4 7 11 @CCcCCcc.... point 0 missense AGA->GGA[Arg->Gly] F46C3.3a,F46C3.3b 4758 CB6648_redo X 11492873 2 X X -1000 -999.99 -1000 -1000 10 -3 7 @...,..,... indel -2 SNP none uCE6-1222 3713 CB6648_redo X 11600446 1 C A 255 1.00 63 62 0 37 37 @aaaaaAAAaaAAaaAAaAaAaAAAaAaAaaAAaAaaa point 0 SNP none haw107592 3714 CB6648_redo X 11624629 1 T C 255 1.00 63 62 0 32 32 @CCCccccCcCCcCccCCCcccCCcccCCCccC point 0 missense GAT->GGT[Asp->Gly] Y71H9A.1 3714 CB6648_redo X 11624629 1 T C 255 1.00 63 62 0 32 32 @CCCccccCcCCcCccCCCcccCCcccCCCccC point 0 SNP none haw107616 4759 CB6648_redo X 11654822 4 X X -1000 -999.99 -1000 -1000 4 -2 2 @....Aa indel -4 nongenic -3539 upstream T04F8.3 4759 CB6648_redo X 11654822 4 X X -1000 -999.99 -1000 -1000 4 -2 2 @....Aa indel -4 nongenic -3979 upstream T04F8.4 4759 CB6648_redo X 11654822 4 X X -1000 -999.99 -1000 -1000 4 -2 2 @....Aa indel -4 nongenic 1332 into T04F8.2.1 4759 CB6648_redo X 11654822 4 X X -1000 -999.99 -1000 -1000 4 -2 2 @....Aa indel -4 nongenic 964 into T04F8.2.2 4760 CB6648_redo X 11689187 1 X X -1000 -999.99 -1000 -1000 10 -7 3 @,.,,...... indel -1 SNP none uCE6-1229 3724 CB6648_redo X 11789301 1 C G 255 9.00 63 62 7 181 188 @g,Gg,G,,,,,GGGGGGGGGggggggGGGGGGGGGGGGggggGGGGGGGGgggggggggGGGGGGGgggggGGGGGGGGGGGGgggGGGGGGggggGGG point 0 nongenic -5046 upstream Y102F5A.1 3724 CB6648_redo X 11789301 1 C G 255 9.00 63 62 7 181 188 @g,Gg,G,,,,,GGGGGGGGGggggggGGGGGGGGGGGGggggGGGGGGGGgggggggggGGGGGGGgggggGGGGGGGGGGGGgggGGGGGGggggGGG point 0 nongenic -9124 upstream C34E11.1.1 3726 CB6648_redo X 11791596 1 G C 71 1.00 63 0 2 5 7 @,,ccCCc point 0 nongenic -6829 upstream C34E11.1.1 3726 CB6648_redo X 11791596 1 G C 71 1.00 63 0 2 5 7 @,,ccCCc point 0 nongenic -7341 upstream Y102F5A.1 3728 CB6648_redo X 11831508 1 C A 255 3.19 63 62 0 56 56 @AaAAAaAAaAaaaAaaAAaaAAAaaAAaaAAAAaAaAaAaaAAaaaaAaaaAAAaa point 0 nongenic 4532 into C34E11.3 3729 CB6648_redo X 11831549 1 T C 255 2.56 63 62 0 42 42 @ccCCCccCccCcCCcccccccCCcccccCcccccccCccccc point 0 nongenic 4491 into C34E11.3 3732 CB6648_redo X 11886519 1 A C 43 1.00 53 30 1 4 5 @,TCCC point 0 nongenic -157 upstream Y62H9A.7 3738 CB6648_redo X 12023120 1 C A 255 3.12 63 62 0 28 28 @AAAaaAAAaaaaaaaAAAaaaAAAaAAA point 0 nongenic -6629 upstream B0198.2 3747 CB6648_redo X 12276999 1 A T 244 8.44 63 62 0 32 32 @ttttttttttttTttttttttttttttttttt point 0 nongenic -1398 upstream C04B4.6 3747 CB6648_redo X 12276999 1 A T 244 8.44 63 62 0 32 32 @ttttttttttttTttttttttttttttttttt point 0 nongenic -3630 upstream C04B4.1.1 3748 CB6648_redo X 12277026 1 C A 255 1.06 63 62 0 21 21 @aAaaaaaaaaaaaaaaaaaaa point 0 nongenic -1425 upstream C04B4.6 3748 CB6648_redo X 12277026 1 C A 255 1.06 63 62 0 21 21 @aAaaaaaaaaaaaaaaaaaaa point 0 nongenic -3603 upstream C04B4.1.1 3749 CB6648_redo X 12277112 1 A G 255 1.06 63 62 0 26 26 @GGGGggGGGGgGgGGggggggGgggg point 0 nongenic -1511 upstream C04B4.6 3749 CB6648_redo X 12277112 1 A G 255 1.06 63 62 0 26 26 @GGGGggGGGGgGgGGggggggGgggg point 0 nongenic -3517 upstream C04B4.1.1 3750 CB6648_redo X 12277116 1 A T 255 1.06 63 62 0 36 36 @TTTTttTTTTtTtTTttttttTttttTttTttTTtt point 0 nongenic -1515 upstream C04B4.6 3750 CB6648_redo X 12277116 1 A T 255 1.06 63 62 0 36 36 @TTTTttTTTTtTtTTttttttTttttTttTttTTtt point 0 nongenic -3513 upstream C04B4.1.1 3751 CB6648_redo X 12277171 1 A T 255 2.88 63 62 0 67 67 @TttTTtTttTTTTTttTTTTTttTTttTTtTTTTTtTtTTtTTTttTTTtTttTttttTTTttTTTT point 0 nongenic -1570 upstream C04B4.6 3751 CB6648_redo X 12277171 1 A T 255 2.88 63 62 0 67 67 @TttTTtTttTTTTTttTTTTTttTTttTTtTTTTTtTtTTtTTTttTTTtTttTttttTTTttTTTT point 0 nongenic -3458 upstream C04B4.1.1 3754 CB6648_redo X 12277312 1 A G 5 2.62 0 16 19 27 46 @gggG,gGgggGGG,g,,.,,..,,.,,,ggG,GGGGgG,GGGG,G, point 0 nongenic -1711 upstream C04B4.6 3754 CB6648_redo X 12277312 1 A G 5 2.62 0 16 19 27 46 @gggG,gGgggGGG,g,,.,,..,,.,,,ggG,GGGGgG,GGGG,G, point 0 nongenic -3317 upstream C04B4.1.1 3755 CB6648_redo X 12277519 1 A G 32 4.38 63 62 227 28 255 @,,,,GG...,.GG,Gggg..,,,,,,Gggg.gGGGG,g...G,G,,,,,G.g.,,G,G,G,,,GGGG,,ggG,,GG,G,G.g.,G,,,G,G,,GGG,G, point 0 nongenic -1918 upstream C04B4.6 3755 CB6648_redo X 12277519 1 A G 32 4.38 63 62 227 28 255 @,,,,GG...,.GG,Gggg..,,,,,,Gggg.gGGGG,g...G,G,,,,,G.g.,,G,G,G,,,GGGG,,ggG,,GG,G,G.g.,G,,,G,G,,GGG,G, point 0 nongenic -3110 upstream C04B4.1.1 3756 CB6648_redo X 12277622 1 T G 255 1.12 63 62 0 107 107 @GGGgggGGgGGGGGGGGgggGGGGGgggggGGGGGggggGGGGGGggGGGGGGGggggGggggggGGGggggggGGGGGgggggggGGGGGggggGGgg point 0 nongenic -2021 upstream C04B4.6 3756 CB6648_redo X 12277622 1 T G 255 1.12 63 62 0 107 107 @GGGgggGGgGGGGGGGGgggGGGGGgggggGGGGGggggGGGGGGggGGGGGGGggggGggggggGGGggggggGGGGGgggggggGGGGGggggGGgg point 0 nongenic -3007 upstream C04B4.1.1 3759 CB6648_redo X 12277788 1 C T 3 2.69 7 14 29 38 67 @TT,TT.TTTTtTTTT,,.TT,..t,T,.TTTt,Ttt.t,t.t.TTTt.ttt.T,,TtT,,,,,,,,. point 0 nongenic -2187 upstream C04B4.6 3759 CB6648_redo X 12277788 1 C T 3 2.69 7 14 29 38 67 @TT,TT.TTTTtTTTT,,.TT,..t,T,.TTTt,Ttt.t,t.t.TTTt.ttt.T,,TtT,,,,,,,,. point 0 nongenic -2841 upstream C04B4.1.1 3760 CB6648_redo X 12277811 1 A G 11 2.75 37 14 15 52 67 @ggg.GGGggggggGGGGgG,,,,,,,,.,,,,gGgGGGGGGGGGGGGGGGGGGGGGGGGgGGG,GGg point 0 nongenic -2210 upstream C04B4.6 3760 CB6648_redo X 12277811 1 A G 11 2.75 37 14 15 52 67 @ggg.GGGggggggGGGGgG,,,,,,,,.,,,,gGgGGGGGGGGGGGGGGGGGGGGGGGGgGGG,GGg point 0 nongenic -2818 upstream C04B4.1.1 3762 CB6648_redo X 12278193 1 T G 4 9.06 0 52 12 23 35 @Ggggggggg..GGG.G....GGGGGGG,.G,G..G point 0 nongenic -2436 upstream C04B4.1.1 3762 CB6648_redo X 12278193 1 T G 4 9.06 0 52 12 23 35 @Ggggggggg..GGG.G....GGGGGGG,.G,G..G point 0 nongenic -2592 upstream C04B4.6 4767 CB6648_redo X 12440274 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @,,..CC indel 0 nongenic -410 upstream T18D3.7.1,T18D3.7.2 3778 CB6648_redo X 12560995 1 T C 245 1.00 63 62 0 13 13 @CCcccCCCCCCCC point 0 nongenic -12995 upstream T24D5.1 3778 CB6648_redo X 12560995 1 T C 245 1.00 63 62 0 13 13 @CCcccCCCCCCCC point 0 nongenic -9395 upstream C16D6.2 3779 CB6648_redo X 12569395 1 A T 227 1.00 63 62 8 25 33 @tTttTt,TTtTtt,TT.tTT.TtTTT.t..t.t point 0 nongenic -17795 upstream C16D6.2 3779 CB6648_redo X 12569395 1 A T 227 1.00 63 62 8 25 33 @tTttTt,TTtTtt,TT.tTT.TtTTT.t..t.t point 0 nongenic -4595 upstream T24D5.1 3780 CB6648_redo X 12600324 1 C A 39 1.00 63 62 2 4 6 @..AaAa point 0 nongenic -1104 upstream T24D5.5 3780 CB6648_redo X 12600324 1 C A 39 1.00 63 62 2 4 6 @..AaAa point 0 nongenic -2626 upstream T24D5.6 3781 CB6648_redo X 12642762 1 A G 69 1.00 63 62 3 5 8 @.,.gGGGg point 0 SNP none haw107971 4769 CB6648_redo X 12642764 2 X X -1000 -999.99 -1000 -1000 7 -5 2 @,..,,,. indel -2 SNP none uCE6-1295 3783 CB6648_redo X 12701755 1 G A 32 1.00 63 10 4 6 10 @aAAAAa,.., point 0 silent TTC->TTT[Phe->Phe] T07C5.3a,T07C5.3b 3784 CB6648_redo X 12786146 1 G C 255 1.00 63 62 0 37 37 @CCCCcccccCCcccCccccCccCCCcCCCCcCCcCCc point 0 missense TGG->TGC[Trp->Cys] T22H6.2a,T22H6.2b 3784 CB6648_redo X 12786146 1 G C 255 1.00 63 62 0 37 37 @CCCCcccccCCcccCccccCccCCCcCCCCcCCcCCc point 0 SNP none haw107989 3785 CB6648_redo X 12795967 1 C A 255 1.00 63 62 0 54 54 @AAaaAAAaaAAaaaAAaAaAAaAAaAaaaAAAAaAAAaAAAaAAaAAAaAAaAA point 0 SNP none haw107990 3785 CB6648_redo X 12795967 1 C A 255 1.00 63 62 0 54 54 @AAaaAAAaaAAaaaAAaAaAAaAAaAaaaAAAAaAAAaAAAaAAaAAAaAAaAA point 0 three_prime_UTR none T22H6.6a,T22H6.6b 3787 CB6648_redo X 13034301 1 T A 255 1.00 63 62 0 42 42 @AaaAaaAAaAAAaaAaAaAAAAaAaaAAAaAAAaaaaAAaAA point 0 SNP none haw108272 3788 CB6648_redo X 13041027 1 A C 3 1.00 63 62 2 4 6 @CCCC.. point 0 SNP none haw108284 4774 CB6648_redo X 13119683 0 X X -1000 -999.99 -1000 -1000 1 1 2 @.Aa indel 0 nongenic -2530 downstream F17H10.3a,F17H10.3b.1 4774 CB6648_redo X 13119683 0 X X -1000 -999.99 -1000 -1000 1 1 2 @.Aa indel 0 nongenic -545 upstream F17H10.3b.2 3789 CB6648_redo X 13235302 1 T A 46 1.00 63 62 2 5 7 @Aa,aaa, point 0 nongenic -2041 upstream K08H2.3 3789 CB6648_redo X 13235302 1 T A 46 1.00 63 62 2 5 7 @Aa,aaa, point 0 nongenic -422 upstream K08H2.2 3791 CB6648_redo X 13384402 1 T A 255 1.00 63 62 0 32 32 @aaaaaaaAAAaaaaAaaaaAAaaAAAAAaAAa point 0 SNP none haw108496 3793 CB6648_redo X 13396051 1 T G 42 1.00 63 26 2 4 6 @,.GGgg point 0 nongenic -897 upstream F02C12.3 3793 CB6648_redo X 13396051 1 T G 42 1.00 63 26 2 4 6 @,.GGgg point 0 nongenic -978 upstream F02C12.4 3794 CB6648_redo X 13437208 1 C T 233 2.94 63 62 0 15 15 @tttttttttttttTt point 0 nongenic -5688 upstream C29F7.5 3794 CB6648_redo X 13437208 1 C T 233 2.94 63 62 0 15 15 @tttttttttttttTt point 0 nongenic 832 into C29F7.6 3795 CB6648_redo X 13480349 1 T A 255 1.00 63 62 0 53 53 @AAaaAaAAAAaaAAaaaaAAAAAAAAaAAAaAaAAaAaaAaAaaaAAAaaaAA point 0 missense AAC->ATC[Asn->Ile] F15A2.4 3795 CB6648_redo X 13480349 1 T A 255 1.00 63 62 0 53 53 @AAaaAaAAAAaaAAaaaaAAAAAAAAaAAAaAaAAaAaaAaAaaaAAAaaaAA point 0 SNP none haw108526,uCE6-1345 4781 CB6648_redo X 13527874 0 X X -1000 -999.99 -1000 -1000 4 0 4 @.,,.Aaaaa indel 0 nongenic -1133 upstream F18H3.4.1 4781 CB6648_redo X 13527874 0 X X -1000 -999.99 -1000 -1000 4 0 4 @.,,.Aaaaa indel 0 nongenic -537 upstream F18H3.3a.1 4781 CB6648_redo X 13527874 0 X X -1000 -999.99 -1000 -1000 4 0 4 @.,,.Aaaaa indel 0 nongenic -586 upstream F18H3.3a.3 3802 CB6648_redo X 13649405 1 A C 15 6.19 63 6 2 3 5 @..CCc point 0 nongenic -1763 upstream C40C9.4 3806 CB6648_redo X 13652271 1 C T 64 1.00 63 0 0 4 4 @tTtt point 0 nongenic -8168 upstream C04A11.1 3806 CB6648_redo X 13652271 1 C T 64 1.00 63 0 0 4 4 @tTtt point 0 nongenic 612 downstream C40C9.4 4782 CB6648_redo X 13656725 3 X X -1000 -999.99 -1000 -1000 11 -7 4 @,,..,...,,. indel -3 SNP none uCE6-1357 4783 CB6648_redo X 13708213 0 X X -1000 -999.99 -1000 -1000 5 -1 4 @,...,ggGG indel 0 nongenic 430 downstream K02D3.2 4783 CB6648_redo X 13708213 0 X X -1000 -999.99 -1000 -1000 5 -1 4 @,...,ggGG indel 0 nongenic 654 downstream K02D3.1 4784 CB6648_redo X 13713053 0 X X -1000 -999.99 -1000 -1000 3 1 4 @,..AA indel 0 nongenic -1026 upstream K11E4.1 4784 CB6648_redo X 13713053 0 X X -1000 -999.99 -1000 -1000 3 1 4 @,..AA indel 0 nongenic -1166 upstream K02D3.2 3807 CB6648_redo X 13737752 1 G T 255 1.00 63 62 0 36 36 @ttTTTtTttTTTTTTTTtTTtTtTtTtttTTttTtt point 0 SNP none haw108674,uCE6-1361 3808 CB6648_redo X 13738978 1 T C 14 1.00 63 38 1 3 4 @.CCC point 0 nongenic -8259 upstream K11E4.5a 3809 CB6648_redo X 13738979 1 G T 71 1.00 63 14 0 5 5 @TTTtt point 0 nongenic -8258 upstream K11E4.5a 3811 CB6648_redo X 13917112 1 G C 255 1.00 63 62 0 31 31 @ccCcCcCCCCCCCcccCcccCcCcCccCcCc point 0 nongenic -15 upstream Y26E6A.1 3812 CB6648_redo X 13936891 1 A C 48 1.00 63 4 1 4 5 @.Cccc point 0 nongenic -1773 upstream K02B9.4a 3812 CB6648_redo X 13936891 1 A C 48 1.00 63 4 1 4 5 @.Cccc point 0 nongenic 2086 into K02B9.4b 3813 CB6648_redo X 14118935 1 A G 255 1.12 63 62 0 15 15 @ggggGGGGGGGGGGG point 0 nongenic -8867 upstream F28H6.4 3813 CB6648_redo X 14118935 1 A G 255 1.12 63 62 0 15 15 @ggggGGGGGGGGGGG point 0 nongenic 1926 into F28H6.6 3816 CB6648_redo X 14229404 1 A T 255 4.62 63 62 0 24 24 @tTTTtttTtTTtTtttttTTttTt point 0 nongenic 185 downstream K04C1.6 3816 CB6648_redo X 14229404 1 A T 255 4.62 63 62 0 24 24 @tTTTtttTtTTtTtttttTTttTt point 0 nongenic 921 downstream K06G5.2 3817 CB6648_redo X 14375235 1 T C 227 1.00 63 62 0 9 9 @CccCCCCcc point 0 SNP none uCE6-1407 3818 CB6648_redo X 14379009 1 T C 27 6.38 0 26 0 18 18 @CCCccccccccCcCCcCc point 0 nongenic -1757 upstream Y60A9A.1 3818 CB6648_redo X 14379009 1 T C 27 6.38 0 26 0 18 18 @CCCccccccccCcCCcCc point 0 nongenic -4162 upstream Y60A9.3 3819 CB6648_redo X 14381923 1 G A 255 1.00 63 62 0 70 70 @aAaaAAAaaaAAaaaaAaaaaaAAaaaaaaAAAAAaaaAaAAaAAaaAAaAAaaaaAAaAAaAAaaAAAa point 0 SNP none haw109439 3823 CB6648_redo X 14510694 1 G A 239 3.62 63 62 0 20 20 @aaaaaAaaaaaaaaaaaaaa point 0 nongenic -6932 upstream M163.1 3823 CB6648_redo X 14510694 1 G A 239 3.62 63 62 0 20 20 @aaaaaAaaaaaaaaaaaaaa point 0 nongenic 532 downstream D1025.3 3824 CB6648_redo X 14510701 1 T G 238 3.50 63 62 0 21 21 @ggggGgggggggggggggggg point 0 nongenic -6939 upstream M163.1 3824 CB6648_redo X 14510701 1 T G 238 3.50 63 62 0 21 21 @ggggGgggggggggggggggg point 0 nongenic 525 downstream D1025.3 3825 CB6648_redo X 14573707 1 A G 16 1.00 63 40 2 3 5 @..gGG point 0 nongenic -4168 upstream C44H4.2 3825 CB6648_redo X 14573707 1 A G 16 1.00 63 40 2 3 5 @..gGG point 0 nongenic 1068 into C44H4.1 3825 CB6648_redo X 14573707 1 A G 16 1.00 63 40 2 3 5 @..gGG point 0 nongenic 4912 into H01A20.2 3826 CB6648_redo X 14577774 1 T A 255 1.00 63 62 0 23 23 @AaaaAaaaAaaAaAaaaaAaaaa point 0 nongenic -101 upstream C44H4.2 3826 CB6648_redo X 14577774 1 T A 255 1.00 63 62 0 23 23 @AaaaAaaaAaaAaAaaaaAaaaa point 0 nongenic 6732 into H01A20.2 3827 CB6648_redo X 14613805 1 C A 255 1.00 63 62 0 41 41 @AaaaaAAAAaAaAaaaAAAaAaaaaaaaaAaaaaaaAaAAa point 0 ncRNA none F54E4.1b 3827 CB6648_redo X 14613805 1 C A 255 1.00 63 62 0 41 41 @AaaaaAAAAaAaAaaaAAAaAaaaaaaaaAaaaaaaAaAAa point 0 silent CGA->AGA[Arg->Arg] F54E4.1a 3828 CB6648_redo X 14621700 1 T C 50 1.00 63 20 3 5 8 @CCCcC... point 0 ncRNA none F54E4.1b 3829 CB6648_redo X 14621702 1 C T 20 1.00 63 50 3 5 8 @TTTtT... point 0 ncRNA none F54E4.1b 3830 CB6648_redo X 14637664 1 A C 255 1.00 63 62 0 31 31 @CCCCcCCccCCCCCCCCCCCccCCccccCCc point 0 nongenic -1335 upstream F54E4.3 3834 CB6648_redo X 14766656 1 G C 109 1.00 63 36 0 4 4 @cccC point 0 silent CCC->CCG[Pro->Pro] Y16B4A.2 3835 CB6648_redo X 14767044 1 C G 255 1.00 63 62 0 45 45 @GGGgGGGGGGgGGggGGGGGGGgGgGGggGgGgGGGgGGgGGggG point 0 missense GAA->CAA[Glu->Gln] Y16B4A.2 3836 CB6648_redo X 14776055 1 A T 160 1.00 63 62 0 6 6 @TTTTTT point 0 nongenic -14871 upstream F42D1.2.1 3836 CB6648_redo X 14776055 1 A T 160 1.00 63 62 0 6 6 @TTTTTT point 0 nongenic -4282 upstream Y16B4A.2 3836 CB6648_redo X 14776055 1 A T 160 1.00 63 62 0 6 6 @TTTTTT point 0 nongenic 2597 into Y16B4A.1 3842 CB6648_redo X 14913406 1 G T 255 1.00 63 62 0 49 49 @TTttTttTTTTtTtTtTTTtTttttTtTtTTtTTttttTtTTttTttTt point 0 SNP none haw110147 3843 CB6648_redo X 14921904 1 G A 255 1.00 63 62 0 11 11 @aaaAaaAaaAa point 0 SNP none haw110159 3844 CB6648_redo X 14921912 1 A G 255 1.00 63 62 0 10 10 @ggGggGggGg point 0 SNP none haw110160 3847 CB6648_redo X 14945493 1 T C 255 1.00 63 62 0 30 30 @CCCccCcccCcccccCcCcccccccCCccc point 0 SNP none haw110192 3848 CB6648_redo X 14962448 1 A T 255 1.00 63 62 0 41 41 @TTTTTTTTTtTTTTTtTTTtTTTTTTTTTTtTtTTTTTTtT point 0 nongenic -393 upstream F45B8.2 3848 CB6648_redo X 14962448 1 A T 255 1.00 63 62 0 41 41 @TTTTTTTTTtTTTTTtTTTtTTTTTTTTTTtTtTTTTTTtT point 0 nongenic -995 upstream F45B8.3 3851 CB6648_redo X 15112157 1 C T 16 1.00 63 60 2 2 4 @..TT point 0 nongenic -4269 upstream F09B12.1b.1 3851 CB6648_redo X 15112157 1 C T 16 1.00 63 60 2 2 4 @..TT point 0 nongenic 2287 into R07D5.2 3852 CB6648_redo X 15207906 1 C T 87 1.00 63 46 0 5 5 @TttTT point 0 nongenic -8848 upstream T10B10.5 3853 CB6648_redo X 15207908 1 A C 55 1.00 63 4 0 4 4 @ccCC point 0 nongenic -8850 upstream T10B10.5 3856 CB6648_redo X 15207922 1 G T 122 1.00 63 38 0 7 7 @tttTttt point 0 nongenic -8864 upstream T10B10.5 3857 CB6648_redo X 15226797 1 G T 255 1.00 63 62 0 50 50 @TtTTTtTTtttttttTttTtTTTTtttTTTtTtTTTTTtTTTTTTTTTTT point 0 missense CCT->CAT[Pro->His] H03A11.2 3857 CB6648_redo X 15226797 1 G T 255 1.00 63 62 0 50 50 @TtTTTtTTtttttttTttTtTTTTtttTTTtTtTTTTTtTTTTTTTTTTT point 0 SNP none haw110591 3861 CB6648_redo X 15447753 1 C T 255 1.31 63 62 0 24 24 @TttTtTTTTTtTttTttTTTtTTT point 0 nongenic -14011 upstream R03A10.6.1 3861 CB6648_redo X 15447753 1 C T 255 1.31 63 62 0 24 24 @TttTtTTTTTtTttTttTTTtTTT point 0 nongenic 1103 into R03A10.5 3863 CB6648_redo X 15472090 1 A T 255 8.31 63 62 0 28 28 @TTttttTttTTttTtTttTgtttTtTtT point 0 nongenic -6848 upstream C46E1.2 3863 CB6648_redo X 15472090 1 A T 255 8.31 63 62 0 28 28 @TTttttTttTTttTtTttTgtttTtTtT point 0 nongenic 1374 into C46E1.3 3864 CB6648_redo X 15520197 1 A G 101 1.00 63 62 1 4 5 @,gGGG point 0 ncRNA none H30A04.1c 3865 CB6648_redo X 15722216 1 A G 255 1.00 63 62 0 48 48 @GGgGGGgggggGggGGGGGgGGggGGGgGGGGGggGggGGGGgGGgGG point 0 nongenic -3834 upstream ZK662.4.1,ZK662.4.2 3865 CB6648_redo X 15722216 1 A G 255 1.00 63 62 0 48 48 @GGgGGGgggggGggGGGGGgGGggGGGgGGGGGggGggGGGGgGGgGG point 0 nongenic 1025 into ZK662.5 3882 CB6648_redo X 15816874 1 A T 100 1.00 63 62 0 4 4 @TTTt point 0 nongenic -4468 upstream Y7A5A.8 3883 CB6648_redo X 15836084 1 A G 255 2.88 63 62 0 61 61 @GGGGGGGgGGGgGggGGgGGGgGgGGgGGGGgGGGgGgGGgGGgGgGGGgggGGGGGgGGG point 0 nongenic -5408 upstream F59F4.2 3883 CB6648_redo X 15836084 1 A G 255 2.88 63 62 0 61 61 @GGGGGGGgGGGgGggGGgGGGgGgGGgGGGGgGGGgGgGGgGGgGgGGGgggGGGGGgGGG point 0 nongenic 2112 into F59F4.1 3884 CB6648_redo X 15836927 1 T C 255 1.00 63 62 0 31 31 @cccCccccccCccccccCccccccccccccc point 0 missense ACA->GCA[Thr->Ala] F59F4.1 3885 CB6648_redo X 15904379 1 C A 255 1.00 63 62 0 44 44 @AAaaaaAAAAAaAAAaaAaaaaAaAAaaaaaAAaaaAaaaAaAA point 0 nongenic -16871 upstream F53H4.3 3885 CB6648_redo X 15904379 1 C A 255 1.00 63 62 0 44 44 @AAaaaaAAAAAaAAAaaAaaaaAaAAaaaaaAAaaaAaaaAaAA point 0 nongenic -6178 upstream F31B9.1 3886 CB6648_redo X 15904380 1 A C 255 1.00 63 62 0 44 44 @CccccCCCCCcCCCccCccccCcCCcccccCCcccCcccCcCCC point 0 SNP none haw111415 3887 CB6648_redo X 15904862 1 T A 142 1.00 63 62 0 4 4 @aaAa point 0 nongenic -17354 upstream F53H4.3 3887 CB6648_redo X 15904862 1 T A 142 1.00 63 62 0 4 4 @aaAa point 0 nongenic -5695 upstream F31B9.1 3888 CB6648_redo X 15945619 1 A T 255 1.00 63 62 0 43 43 @TTtTTTtTtttTtTtTttTTTtTTTTTTTTttTTttTTttTTT point 0 SNP none haw111469 3889 CB6648_redo X 15945743 1 G T 162 1.00 63 62 0 5 5 @tTtTt point 0 nongenic -6498 upstream E03G2.2 3889 CB6648_redo X 15945743 1 G T 162 1.00 63 62 0 5 5 @tTtTt point 0 nongenic -6550 upstream E03G2.4 3889 CB6648_redo X 15945743 1 G T 162 1.00 63 62 0 5 5 @tTtTt point 0 nongenic 1815 into E03G2.3 3890 CB6648_redo X 15945744 1 G T 160 1.00 63 62 0 5 5 @tTtTt point 0 nongenic -6499 upstream E03G2.2 3890 CB6648_redo X 15945744 1 G T 160 1.00 63 62 0 5 5 @tTtTt point 0 nongenic -6549 upstream E03G2.4 3890 CB6648_redo X 15945744 1 G T 160 1.00 63 62 0 5 5 @tTtTt point 0 nongenic 1816 into E03G2.3 3891 CB6648_redo X 15945755 1 A T 255 1.00 63 62 0 10 10 @TttTTtTttt point 0 nongenic -6510 upstream E03G2.2 3891 CB6648_redo X 15945755 1 A T 255 1.00 63 62 0 10 10 @TttTTtTttt point 0 nongenic -6538 upstream E03G2.4 3891 CB6648_redo X 15945755 1 A T 255 1.00 63 62 0 10 10 @TttTTtTttt point 0 nongenic 1827 into E03G2.3 3893 CB6648_redo X 16010916 1 G T 255 1.00 63 62 0 35 35 @TTtTtttttTttttttTTTTTTTtttttTttttTt point 0 SNP none haw111536 3894 CB6648_redo X 16010919 1 C A 255 1.00 63 62 0 33 33 @AaaaaaAaaaaaaAAAAAAAaaaaaAaaaaAaa point 0 nongenic -14063 upstream C09G1.4 3895 CB6648_redo X 16029144 1 A C 228 1.00 63 62 0 16 16 @cccccccccccccccc point 0 nongenic -1579 upstream B0395.2 3896 CB6648_redo X 16029151 1 T C 195 0.00 63 62 0 10 10 @cccccccccc point 0 nongenic -1572 upstream B0395.2 3899 CB6648_redo X 16102626 1 T G 255 1.00 63 62 0 46 46 @ggGgGGGgggGgGgGGGGGggGgGgGgGGgGggggggggGgGGGGg point 0 SNP none CE6-235,haw111583 3900 CB6648_redo X 16120770 1 G A 161 1.00 63 44 2 6 8 @AaaAaA., point 0 nongenic 2900 into ZK1073.2 3901 CB6648_redo X 16120773 1 A T 44 1.00 63 62 2 4 6 @tTtT., point 0 nongenic 2897 into ZK1073.2 3903 CB6648_redo X 16224804 1 A G 54 1.69 63 34 0 4 4 @ggGg point 0 nongenic -4575 upstream F23A7.5 3909 CB6648_redo X 16225133 1 T C 118 1.00 63 62 0 4 4 @CCCC point 0 nongenic -4246 upstream F23A7.5 3910 CB6648_redo X 16225141 1 T C 132 1.19 63 62 0 5 5 @CCCCC point 0 nongenic -4238 upstream F23A7.5 3911 CB6648_redo X 16255156 1 G T 255 1.00 63 62 0 19 19 @ttTTTtTTTtTTTTTTTtT point 0 nongenic 226 into W10G6.2a.2,W10G6.2b 3911 CB6648_redo X 16255156 1 G T 255 1.00 63 62 0 19 19 @ttTTTtTTTtTTTTTTTtT point 0 nongenic 398 into W10G6.2a.1 3914 CB6648_redo X 16255728 1 T C 209 2.19 63 62 0 11 11 @CCCCCCCCCCC point 0 nongenic 798 into W10G6.2a.2,W10G6.2b 3914 CB6648_redo X 16255728 1 T C 209 2.19 63 62 0 11 11 @CCCCCCCCCCC point 0 nongenic 970 into W10G6.2a.1 3915 CB6648_redo X 16255860 1 T A 232 1.00 63 62 0 16 16 @AAAAAAAAAAAAAAAA point 0 SNP none haw111737 4801 CB6648_redo X 16256026 0 X X -1000 -999.99 -1000 -1000 5 0 5 @,,,,,cccCCC indel 0 nongenic -1095 downstream W10G6.2a.2,W10G6.2b 4801 CB6648_redo X 16256026 0 X X -1000 -999.99 -1000 -1000 5 0 5 @,,,,,cccCCC indel 0 nongenic -1267 downstream W10G6.2a.1 3916 CB6648_redo X 16302440 1 T A 255 5.56 63 62 0 22 22 @AGAaaaAaAAAaaaAaAAAAAA point 0 nongenic -15764 upstream F52E10.4 3916 CB6648_redo X 16302440 1 T A 255 5.56 63 62 0 22 22 @AGAaaaAaAAAaaaAaAAAAAA point 0 nongenic -3941 upstream T01B4.2b 3916 CB6648_redo X 16302440 1 T A 255 5.56 63 62 0 22 22 @AGAaaaAaAAAaaaAaAAAAAA point 0 nongenic 1601 into T01B4.1 3917 CB6648_redo X 16305598 1 T G 14 1.38 63 46 13 16 29 @.,,,.,.,....,ggGGGGGGGGggGGGg point 0 nongenic -783 upstream T01B4.2b 3919 CB6648_redo X 16460133 1 C A 255 1.00 63 62 0 42 42 @AaAAaaaAAaaAAAAAAAaAaAAAAAAaAaaaaaAaAAaAaa point 0 SNP none haw111863 3920 CB6648_redo X 16460180 1 C A 255 1.00 63 62 0 38 38 @AAaAaaAAAAAAAaAAAAaAaAAaaAAAAaaAAAaaaA point 0 SNP none haw111864 3923 CB6648_redo X 16531637 1 G T 21 1.00 63 42 0 4 4 @CCCT point 0 nongenic -5114 upstream T27B1.2.1 3924 CB6648_redo X 16532012 1 G C 14 1.00 63 62 3 3 6 @CC.C.. point 0 nongenic -4739 upstream T27B1.2.1 3925 CB6648_redo X 16608719 1 G A 98 1.00 63 62 4 7 11 @,,,.AaAaAaa point 0 nongenic -4646 upstream C06G1.4.1 3925 CB6648_redo X 16608719 1 G A 98 1.00 63 62 4 7 11 @,,,.AaAaAaa point 0 nongenic -6084 upstream F59C12.4 3925 CB6648_redo X 16608719 1 G A 98 1.00 63 62 4 7 11 @,,,.AaAaAaa point 0 nongenic 723 into F59C12.3 3926 CB6648_redo X 16661001 1 G T 61 1.00 63 30 0 4 4 @tttt point 0 silent CGA->AGA[Arg->Arg] F43B10.1 3927 CB6648_redo X 16687504 1 A G 210 1.31 63 62 7 15 22 @,.,,,,,ggGGgggGGggGGgg point 0 nongenic -1879 upstream F22H10.4 3927 CB6648_redo X 16687504 1 A G 210 1.31 63 62 7 15 22 @,.,,,,,ggGGgggGGggGGgg point 0 nongenic 825 into F22H10.5 3928 CB6648_redo X 16787261 1 A T 255 1.00 63 62 0 43 43 @tTTtTTttttTtTtttTtTTTtTTtTttttTtTTtTTTTttTt point 0 SNP none haw111929 3929 CB6648_redo X 16817032 1 T C 255 1.00 63 62 0 24 24 @cCCcCCCcCCCCccccCCCcCcCC point 0 missense AAA->GAA[Lys->Glu] F41G4.3a,F41G4.3b 3932 CB6648_redo X 16981415 1 T C 142 1.00 63 62 0 6 6 @CCCCCC point 0 SNP none haw111956 3934 CB6648_redo X 17025320 1 A T 255 1.00 63 62 0 15 15 @tTTtTTTTTTTTTTT point 0 nongenic -4597 upstream F35B3.4 3934 CB6648_redo X 17025320 1 A T 255 1.00 63 62 0 15 15 @tTTtTTTTTTTTTTT point 0 nongenic 1098 into F35B3.5b 3934 CB6648_redo X 17025320 1 A T 255 1.00 63 62 0 15 15 @tTTtTTTTTTTTTTT point 0 nongenic 3583 into F35B3.5a 3935 CB6648_redo X 17047302 1 C T 255 1.00 63 62 0 24 24 @tTTttTTTttTTTTTTTttTTTtt point 0 missense GAG->AAG[Glu->Lys] C30G4.3.1,C30G4.3.2 3936 CB6648_redo X 17047309 1 T C 255 1.00 63 62 0 21 21 @CCccCCCCCCCccCCCccccc point 0 silent GAA->GAG[Glu->Glu] C30G4.3.1,C30G4.3.2 3937 CB6648_redo X 17047323 1 G T 255 1.00 63 62 0 17 17 @TTTttttttttttTTtt point 0 missense CAG->AAG[Gln->Lys] C30G4.3.1,C30G4.3.2 3940 CB6648_redo X 17105478 1 G C 255 1.00 63 62 0 23 23 @CcccCcccccCCCccccCccccc point 0 nongenic -690 upstream C08A9.8 3941 CB6648_redo X 17168879 1 A G 255 1.19 63 62 0 25 25 @gggggGgGGggGggGgGGgGgggGg point 0 nongenic -11005 upstream T23C6.5 4805 CB6648_redo X 17228978 0 X X -1000 -999.99 -1000 -1000 3 1 4 @,.,GGG indel 0 inframe none T25G12.6 3949 CB6648_redo X 17443493 1 C T 39 7.88 34 30 8 8 16 @........ttTTTttt point 0 nongenic -8813 upstream C36E6.2 3950 CB6648_redo X 17443799 1 A C 3 2.81 0 12 0 5 5 @cgccc point 0 nongenic -8507 upstream C36E6.2 3960 CB6648_redo X 17444362 1 A C 68 5.06 30 62 0 12 12 @CCCCCCCCcccC point 0 nongenic -7944 upstream C36E6.2 3961 CB6648_redo X 17444421 1 A C 16 2.00 0 16 0 9 9 @CCCCCCCCC point 0 nongenic -7885 upstream C36E6.2 3963 CB6648_redo X 17444481 1 G C 22 2.00 0 22 0 10 10 @CCCCCCccCC point 0 nongenic -7825 upstream C36E6.2 3968 CB6648_redo X 17621416 1 A T 255 1.12 63 62 0 30 30 @tTtttTtTTTTTTTttttttTTttTTtTtT point 0 SNP none haw112084 3969 CB6648_redo X 17715334 1 G A 255 1.00 63 62 0 40 40 @AaAAAAAAaAAAaAAAaaAAAAaaaAaaaAaaAAAaaAAA point 0 nongenic 455 into cTel55X.1a.2,cTel55X.1b 3969 CB6648_redo X 17715334 1 G A 255 1.00 63 62 0 40 40 @AaAAAAAAaAAAaAAAaaAAAAaaaAaaaAaaAAAaaAAA point 0 nongenic 457 into cTel55X.1a.1 3969 CB6648_redo X 17715334 1 G A 255 1.00 63 62 0 40 40 @AaAAAAAAaAAAaAAAaaAAAAaaaAaaaAaaAAAaaAAA point 0 nongenic 589 downstream 6R55.2