id mutant_strain dna start length reference_base sample_base consensus_score loci_multiplicity mapping_quality neighbor_quality number_wildtype_reads number_variant_reads sequencing_depth sample_reads variant_type indel_size classes descriptions parent_features 1 CB6648_redo I 200948 1 A T 255 1.00 63 62 0 26 26 @ttttttttttTtTtTTTtTTtTTttt point 0 SNP none {haw293} 2 CB6648_redo I 200949 1 C T 255 1.00 63 62 0 27 27 @ttttttttttTtTtTTTtTTtTTtttt point 0 SNP none {haw294} 14 CB6648_redo I 316117 1 T G 235 1.00 63 62 0 16 16 @GGGGGGGGGGGGGGGG point 0 SNP none {haw435,uCE1-530} 21 CB6648_redo I 361325 1 C A 255 1.00 63 62 0 32 32 @AAAaAaaaAAaaAaAAAAaAaaAAaaaaaaAA point 0 missense AAG->AAT[Lys->Asn] {R119.1} 22 CB6648_redo I 369897 1 T C 255 1.19 63 62 0 25 25 @ccccccccccccCcCccCCCCcCcc point 0 nongenic 1525 into {R119.2} 160775 CB6648_redo I 670389 105 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3923 to 4028 bp into {Y18H1A.14} 33 CB6648_redo I 742850 1 T C 84 1.00 63 6 2 3 5 @CCc.. point 0 silent GAA->GAG[Glu->Glu] {Y18H1A.13} 40 CB6648_redo I 808102 1 C T 255 1.00 63 62 0 31 31 @TttTTtTtTtttTTTTtTTTtTtTttttTtt point 0 nongenic,nongenic -29895 upstream,4733 into {ZC123.1},{ZC123.3} 41 CB6648_redo I 852015 1 T C 8 1.00 63 62 3 4 7 @.CC.CC. point 0 nongenic,nongenic -1445 upstream,-5249 upstream {Y95B8A.8},{ZC123.4a,ZC123.4b,ZC123.4c} 46 CB6648_redo I 964212 1 C T 255 1.00 63 62 0 23 23 @TTtttTttTTTttTttTttTtTT point 0 nongenic,nongenic -6836 upstream,511 into {Y34D9B.1a},{F54A5.2} 47 CB6648_redo I 968802 1 G C 255 1.00 63 62 0 25 25 @CCcCCCcCcCCCCCCCCcCcCCCCc point 0 nongenic,nongenic,nongenic,nongenic -11426 upstream,627 into,879 downstream,906 downstream {Y34D9B.1a},{F54A5.2},{F54A5.3a},{F54A5.3d} 49 CB6648_redo I 995392 1 C T 255 1.00 63 62 0 28 28 @TttTtttttTTtttTTTtTttTtttttt point 0 nongenic -654 upstream {C54G6.3} 58 CB6648_redo I 1142103 1 C A 255 1.00 63 62 0 30 30 @AaaAaAAaAAaaaAaAAaAaAaaAaAaaAA point 0 missense,SNP GGT->TGT[Gly->Cys],none {Y48G8AL.10},{haw1570} 66 CB6648_redo I 1250355 1 C T 255 1.06 63 62 0 28 28 @TTttTTttttTtttTTTttttTtTTttT point 0 nongenic,nongenic,nongenic -21071 upstream,-4415 upstream,4312 into {Y48G8AL.13.2},{Y48G8AL.15},{Y48G8AL.1} 67 CB6648_redo I 1252577 1 C T 255 2.81 63 62 0 32 32 @TTTtTtTtTTTTTTtTtTtTttTTtTtTtTTT point 0 nongenic,nongenic,nongenic -2193 upstream,-23293 upstream,2090 into {Y48G8AL.15},{Y48G8AL.13.2},{Y48G8AL.1} 68 CB6648_redo I 1295413 1 C T 255 1.00 63 62 0 23 23 @TTttTTttTTtTTTTTTTTTTTT point 0 nongenic -10162 upstream {K12C11.4} 69 CB6648_redo I 1302563 1 G T 255 1.62 63 62 1 13 14 @,TttTTTTttTtTt point 0 nongenic -3012 upstream {K12C11.4} 88 CB6648_redo I 1376716 1 T G 10 6.75 63 62 5 5 10 @.,,..gGGGG point 0 nongenic 226 downstream {Y92H12BL.4} 114 CB6648_redo I 1416689 1 C A 255 1.00 63 62 0 42 42 @aaaaaaAaAaAAAAAAAAaaAaaaAAAAaaaAAAaAAaaAaA point 0 missense ACC->AAC[Thr->Asn] {Y92H12BR.3a,Y92H12BR.3b} 160776 CB6648_redo I 1440206 53 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3926 to 3979 bp into {Y92H12BR.8} 122 CB6648_redo I 1638756 1 C T 255 1.00 63 62 0 36 36 @TTtTTttTTttTttttTttttTtTTTtttTTTTTat point 0 missense CCG->TCG[Pro->Ser] {Y73E7A.8} 123 CB6648_redo I 1648904 1 C T 255 1.00 63 62 0 30 30 @ttTtttTTtTttttttttttttttttTttt point 0 nongenic,nongenic 239 downstream,2476 into {Y71G12B.20b},{Y71G12B.20a} 126 CB6648_redo I 1699307 1 C T 255 6.62 63 62 0 27 27 @TttttttttttttttTttttTtttttt point 0 nongenic,nongenic,nongenic,nongenic -2051 upstream,-7694 upstream,1213 into,958 into {Y71G12B.14},{Y71G12B.31},{Y71G12B.15.1},{Y71G12B.15.2} 127 CB6648_redo I 1740504 1 C T 255 1.00 63 62 0 14 14 @TTTtttTttTtTtt point 0 three_prime_UTR none {Y71G12B.11a} 128 CB6648_redo I 1814653 1 G A 255 3.25 63 62 0 24 24 @AAAaAaAAAAaaaAaaAAAaAaAA point 0 nongenic,nongenic -1497 upstream,551 into {Y71G12B.2},{Y71G12B.32} 129 CB6648_redo I 1864004 1 T C 255 1.19 63 62 0 20 20 @cccccCCccCCccccCcccC point 0 SNP none {haw2851} 130 CB6648_redo I 1866020 1 G A 255 1.00 63 62 0 41 41 @AaAaAAAAAAaAAAAaaaAAaaaaAaaAaAAAaAAAAaaAa point 0 nongenic,nongenic,nongenic -5440 upstream,-8127 upstream,3408 into {M01D7.1},{Y71G12A.3},{M01D7.2} 131 CB6648_redo I 1902592 1 G A 255 1.00 63 62 0 49 49 @aAaaaaAAAaAAAAAAaaaaaaAAAaAaAAaAAaAaaAaAAaaAAaaaa point 0 missense GAT->AAT[Asp->Asn] {Y71G12A.2a,Y71G12A.2b} 132 CB6648_redo I 2033983 1 A G 253 1.00 63 62 4 13 17 @g.,G,,gGGgGGgGGGG point 0 nongenic,nongenic 32 downstream,401 downstream {Y20F4.2},{Y20F4.4} 133 CB6648_redo I 2033985 1 G A 255 1.00 63 62 2 18 20 @a.,AAAaAAaAAaAAAAAaa point 0 nongenic,nongenic 34 downstream,399 downstream {Y20F4.2},{Y20F4.4} 135 CB6648_redo I 2379643 1 C T 255 1.00 63 62 0 12 12 @tTTTtTttTTtt point 0 missense,SNP ATG->ATA[Met->Ile],none {Y39G10AR.17},{snp_Y39G10AR[4]} 137 CB6648_redo I 2554858 1 T G 5 5.31 63 0 1 5 6 @GGGgg. point 0 nongenic,nongenic,nongenic -3266 upstream,-3442 upstream,1764 into {Y23H5B.9},{C55C2.4},{Y23H5B.1} 139 CB6648_redo I 2554864 1 C G 3 3.00 63 0 1 4 5 @,gggg point 0 nongenic,nongenic,nongenic -3272 upstream,-3436 upstream,1770 into {Y23H5B.9},{C55C2.4},{Y23H5B.1} 140 CB6648_redo I 2568367 1 C T 255 1.00 63 62 0 32 32 @TTtTtttTtTtTTttTTtTTtTttttTttTTt point 0 nongenic -393 upstream {C55C2.1} 141 CB6648_redo I 2568368 1 G A 255 1.00 63 62 0 33 33 @AAaAaaaAaAaAAaaAAaAAaAaaaaAaaAAaa point 0 nongenic -392 upstream {C55C2.1} 142 CB6648_redo I 2579329 1 A T 255 1.00 63 62 0 45 45 @TTtTTtTtTttttTTttttttTTttTtttTtTTtttTtttTtTTt point 0 nongenic -3307 upstream {C55C2.5a,C55C2.5b,C55C2.5c} 143 CB6648_redo I 2652465 1 A G 46 2.62 63 62 2 4 6 @..GGGG point 0 nongenic,nongenic,nongenic,nongenic -15695 upstream,-752 upstream,4770 into,4778 into {F32B5.6d.1},{F40E3.6},{F40E3.5.1},{F40E3.5.2} 144 CB6648_redo I 2710697 1 T C 255 1.00 63 62 0 45 45 @cCCCCCCcCccCcCCCCccccCCCccCcCCCCCCCCCCCCCccCc point 0 SNP none {haw4255} 145 CB6648_redo I 2777373 1 C G 255 1.00 63 62 0 16 16 @GGGGGgGGGgGGGggG point 0 five_prime_UTR,silent none,GCG->GCC[Ala->Ala] {Y71F9B.13c},{Y71F9B.13a,Y71F9B.13b} 146 CB6648_redo I 2889894 1 A G 255 1.00 63 62 0 29 29 @gggggGGGgggGggGGggggggGgggggg point 0 nongenic,nongenic,nongenic -552 upstream,3826 into,458 downstream {Y71F9AL.6},{Y71F9AL.16},{Y71F9AL.7} 147 CB6648_redo I 3059396 1 C T 255 1.00 63 62 0 19 19 @TtttttttTtTTtTtTtTt point 0 missense CCC->TCC[Pro->Ser] {Y54E10BR.1} 152 CB6648_redo I 3264208 1 C T 255 1.00 63 62 0 48 48 @TtTTTttTtTTTtttTTttTtTTtTTtttTTttTttTTtttTTttttt point 0 nongenic,nongenic,nongenic 51 downstream,78 downstream,96 downstream {Y44E3B.1c},{Y44E3B.1b.1,Y44E3B.1b.2},{Y44E3B.2} 153 CB6648_redo I 3275605 1 C T 255 1.00 63 62 0 32 32 @ttttttTtTTTtttttTtTtttTTTtTttTtt point 0 nongenic,nongenic,nongenic -11777 upstream,2052 into,5280 into {W01B11.2},{W01B11.5a},{W01B11.5b} 154 CB6648_redo I 3460767 1 C T 255 1.00 63 62 0 30 30 @ttTttTTttTTTtTTttTttTtTTtTtTTT point 0 missense ACA->ATA[Thr->Ile] {Y47G6A.11} 158 CB6648_redo I 3576289 1 C T 255 1.00 63 62 0 39 39 @TtttTTttTTTTtTtTTTtTTtttTTTTTtttTTttTTt point 0 missense CGT->CAT[Arg->His] {Y47G6A.23} 161 CB6648_redo I 3885008 1 A G 255 1.00 63 62 0 29 29 @GgggggggGGGggggGgGGGGGGGgGGGG point 0 SNP none {haw5911} 162 CB6648_redo I 3885020 1 A G 255 1.00 63 62 0 28 28 @gGGGggggGgGGGGGGGgGGGGGgGGgg point 0 SNP none {haw5912} 163 CB6648_redo I 3935098 1 T C 255 1.19 63 62 0 27 27 @cCcCcCCCcCCCCcccCCCCccCcCcC point 0 nongenic,nongenic 184 downstream,305 downstream {T21E3.3},{T21E3.1} 164 CB6648_redo I 3935121 1 A C 255 1.62 63 62 0 19 19 @cCCCCccCcCcCcCcCCCC point 0 nongenic,nongenic 161 downstream,328 downstream {T21E3.3},{T21E3.1} 165 CB6648_redo I 3935148 1 G C 255 1.56 63 62 0 12 12 @cCcCCCCCCCCC point 0 nongenic,nongenic 134 downstream,355 downstream {T21E3.3},{T21E3.1} 168 CB6648_redo I 3957468 1 C T 255 1.00 63 62 0 21 21 @TTtTTtTtTTtTtTTtTtTtT point 0 nongenic,nongenic -3523 upstream,-3570 upstream {T21E3.3},{F47B3.4} 172 CB6648_redo I 3990146 1 T C 94 3.25 63 62 109 146 255 @Ccc,C,,,,,CC,,cC,,cC,CCCCCCc,C,,CCCC,CcCC,CCC.CCCC,CccCC,cC,,,C,,c,C,,,,Ccc,CC,,.CCc,C,,CC,Ccc,,,,, point 0 nongenic -5564 upstream {F28H1.1} 173 CB6648_redo I 3990323 1 T C 255 2.62 63 62 98 157 255 @,,c,,c,CC,cc,..C,CCcC,..cC,.,c,cc,,..C,C,C.c.cCC,CCCccccccCCCCCCCCCc.c.CCCCcC,CCCCCCCCc.cc.CCCCCCCC point 0 nongenic -5387 upstream {F28H1.1} 175 CB6648_redo I 4123614 1 C T 255 1.00 63 62 0 44 44 @ttttTttttTtttttTTTtttTTTTTtttTTtTTtttTtttTTt point 0 missense CAC->TAC[His->Tyr] {H31G24.1} 176 CB6648_redo I 4127917 1 G A 255 1.00 63 62 0 38 38 @AAaAAAAAAAaaAaAaaAaAaAaAaAaaaaaaaAaAAa point 0 SNP none {haw6028} 179 CB6648_redo I 4185827 1 G C 31 6.81 63 32 2 3 5 @CCC,, point 0 nongenic,nongenic,nongenic,nongenic -721 upstream,-723 upstream,766 into,832 downstream {C18E3.7c.1},{C18E3.7b,C18E3.7c.2,C18E3.7d.2,C18E3.7d.3},{C18E3.7a},{R12E2.1} 181 CB6648_redo I 4220893 1 C T 132 1.00 63 62 1 5 6 @.TttTt point 0 nongenic,nongenic -5138 upstream,-8684 upstream {C18E3.9a},{C43E11.6a.2,C43E11.6d.1,C43E11.6d.2,C43E11.6e.2} 182 CB6648_redo I 4370674 1 C T 255 1.00 63 62 0 38 38 @TTttttttTTtttTttTtttttTttttttttttttTtt point 0 missense GGT->GAT[Gly->Asp] {ZK973.9} 184 CB6648_redo I 4463742 1 G C 47 7.31 63 62 6 9 15 @CCCccCcCC..,.., point 0 nongenic,nongenic -1036 upstream,-112 upstream {C41D11.6},{T01A4.3} 185 CB6648_redo I 4476753 1 C A 236 1.00 63 62 0 20 20 @aaaaaaaaaaaaaaaaaaaa point 0 SNP none {haw6315} 186 CB6648_redo I 4479555 1 C T 255 1.00 63 62 0 23 23 @TttTtTttTTTTTTTtttttttt point 0 nongenic -1683 upstream {T01A4.1d} 187 CB6648_redo I 4510544 1 G A 255 1.00 63 62 0 41 41 @AAaAaaAaAAaaaaaaAAAaAAAAaAAaaAaaAaAaaAAaA point 0 silent TAC->TAT[Tyr->Tyr] {Y119C1B.4} 3984 CB6648_redo I 4545401 0 X X -1000 -999.99 -1000 -1000 23 1 24 @,,,,,,,,,,,AA,.,,,,,...,. indel 5 nongenic,nongenic -5078 upstream,-5692 upstream {Y119C1B.3},{Y119C1B.9} 221 CB6648_redo I 4551446 1 G A 255 1.00 63 62 0 46 46 @AAAaaAaaAaaAAaaAaAaaAAaaAAaaaAaAAAAAAaaAaAAAaA point 0 missense GTA->ATA[Val->Ile] {Y119C1B.3} 222 CB6648_redo I 4565213 1 G A 255 1.00 63 62 0 21 21 @AaaAAAaAaAaAaaAAaAAAa point 0 missense GGA->GAA[Gly->Glu] {D1007.14} 223 CB6648_redo I 4719685 1 C G 147 1.00 63 62 0 7 7 @gggggGg point 0 nongenic,nongenic -104 upstream,108 downstream {C10H11.7},{W09C3.1} 3985 CB6648_redo I 4785681 0 X X -1000 -999.99 -1000 -1000 6 -4 2 @..,,.,cC indel 0 nongenic -7962 upstream {M04F3.5} 226 CB6648_redo I 4847556 1 G A 255 1.00 63 62 0 41 41 @aaaaAAAaaAAAaaAaaaaaaaaAAAAAAAaaAAaaaAAaA point 0 three_prime_UTR none {F57C9.2} 227 CB6648_redo I 4925865 1 C T 255 1.00 63 62 0 20 20 @tttTtTTttTtttTTTtTTT point 0 nongenic,nongenic,nongenic -783 upstream,-868 upstream,370 into {F28B3.5a},{F28B3.5b},{F28B3.8} 228 CB6648_redo I 5087936 1 G A 255 1.00 63 62 0 36 36 @AAAaaaaaaaAAAaaAAAaAaAaaaaAaaaAaAaAa point 0 nongenic,nongenic,nongenic,nongenic,nongenic -5651 upstream,-8667 upstream,1420 into,1617 into,1624 into {C30F8.2.1},{C30F8.3},{C30F8.4b.1},{C30F8.4a.2,C30F8.4b.2},{C30F8.4a.1} 231 CB6648_redo I 5221052 1 C A 255 1.00 63 62 0 50 50 @AaaaAaaaAaAaaaaaaAAAaAaAaaaaaAaaaAAAaaAAAaaaaAaaAA point 0 nongenic -5830 upstream {C32E12.5.1} 233 CB6648_redo I 5301101 1 C A 255 1.00 63 62 0 35 35 @AAAaAAAaaAaaAaAaaAAAAAaAaaaaAAAAAAA point 0 SNP,three_prime_UTR none,none {haw6781,uCE1-872},{C01G8.9a} 234 CB6648_redo I 5357123 1 T C 58 1.00 63 10 5 8 13 @cCCcCccc.,... point 0 nongenic,nongenic,nongenic -1399 upstream,187 downstream,96 downstream {F55A12.3},{F55A12.4c},{F55A12.4a} 235 CB6648_redo I 5357124 1 C T 10 1.00 63 58 7 7 14 @TTtTttt.,...,. point 0 nongenic,nongenic,nongenic -1398 upstream,188 downstream,97 downstream {F55A12.3},{F55A12.4c},{F55A12.4a} 236 CB6648_redo I 5448372 1 A T 255 1.00 63 62 1 32 33 @tTttTtTTt,TtttTtTTTttTTttTtTTtTTT point 0 SNP none {haw6835} 237 CB6648_redo I 5451259 1 G A 255 1.69 63 62 2 29 31 @.Aa.AAaaAAAaAaAaAAAAaaAAaAAAAAA point 0 nongenic -4400 upstream {F27C1.13} 238 CB6648_redo I 5528995 1 G A 255 1.00 63 62 0 35 35 @aAAaaaAAaaaaAAaaAAaaAaaAAaaaAAaaAAa point 0 nongenic,nongenic -3651 upstream,767 into {F59A3.8},{F59A3.1} 239 CB6648_redo I 5590737 1 A C 97 1.00 63 62 3 7 10 @,..CCcCccc point 0 nongenic,nongenic,nongenic -1153 upstream,126 into,6517 into {M01E11.7b.1},{M01E11.7d},{M01E11.7a,M01E11.7c} 240 CB6648_redo I 5961997 1 G A 255 1.00 63 62 0 37 37 @AAAaaaaAaaaAaAAaaaaaaAAaAaAAAAAaAAAaa point 0 nongenic -2468 upstream {B0207.10} 241 CB6648_redo I 6139031 1 A T 255 6.94 63 62 0 25 25 @tttttttttttTTTTtTTTtttTTT point 0 nongenic,nongenic 186 downstream,73 downstream {F56F4.6},{F56F4.4} 242 CB6648_redo I 6163210 1 T A 255 1.00 63 62 0 34 34 @AaAaaAaaaaaAaAAaAaAaaaAAaAAAaaAAaA point 0 SNP none {haw7231} 243 CB6648_redo I 6163280 1 T C 145 1.00 63 62 0 5 5 @CcCcc point 0 nongenic -1612 upstream {T09B4.7} 248 CB6648_redo I 6228712 1 A C 49 4.50 63 62 3 24 27 @CCCCcCCccCCCCC.CC,cC,CCCCCC point 0 nongenic 612 into {T08B2.3} 249 CB6648_redo I 6263282 1 G C 110 1.00 63 62 0 5 5 @ccCCc point 0 SNP none {snp_C48E7[3]} 252 CB6648_redo I 6356101 1 C T 255 1.00 63 62 0 46 46 @ttTttTTTTtttTttTTtttTTttttTTTtTtTtttttTttTtttT point 0 nongenic,nongenic,nongenic,nongenic 523 downstream,524 downstream,580 into,666 downstream {K04F10.6a},{K04F10.6b},{K04F10.4d},{K04F10.4c} 253 CB6648_redo I 6500125 1 G A 255 1.69 63 62 5 28 33 @,a,a,aaaaAA,AaaAaAaAaAaAAAaa.aaaa point 0 silent GAG->GAA[Glu->Glu] {C55B7.3} 254 CB6648_redo I 6801831 1 T C 27 1.00 63 62 1 3 4 @CcC, point 0 three_prime_UTR none {E02D9.1b.1,E02D9.1b.2} 255 CB6648_redo I 6820252 1 T C 255 1.00 63 62 0 26 26 @CCCCCcCCCccccCcCCCccCcCCCc point 0 SNP none {haw7362} 256 CB6648_redo I 6913792 1 C T 255 1.00 63 62 0 51 51 @TTttTtTTTTttTttTTttttTtTtTTtttttttTtTTttTTTtttttTTt point 0 nongenic,nongenic -1253 upstream,-213 upstream {C48B6.3.1},{C48B6.6a,C48B6.6b} 257 CB6648_redo I 6949307 1 A G 222 2.19 63 62 0 14 14 @gggggggggggggg point 0 nongenic,nongenic,nongenic,nongenic -1826 upstream,-3949 upstream,1151 into,814 into {T10B11.1},{T10B11.6},{T10B11.7a},{T10B11.7b} 258 CB6648_redo I 6949331 1 T A 229 3.00 63 62 0 19 19 @aaaaaaaaaaaaaaaaaaa point 0 nongenic,nongenic,nongenic,nongenic -1802 upstream,-3973 upstream,1127 into,790 into {T10B11.1},{T10B11.6},{T10B11.7a},{T10B11.7b} 259 CB6648_redo I 7140681 1 G T 255 1.00 63 62 0 33 33 @TttTttttttTTTttttTtTtTttttTtttttT point 0 nongenic,nongenic -708 upstream,405 into {K10D3.4},{H37N21.1} 260 CB6648_redo I 7140819 1 T C 255 1.00 63 62 0 31 31 @CcCCccCcCCcCCCCCcCcCcCCCcCcCCcc point 0 SNP none {haw7427} 261 CB6648_redo I 7140831 1 A T 255 1.00 63 62 0 32 32 @TtTTtTTTTTtTtTtTTTtTtTTtttTTTTTT point 0 SNP none {haw7428} 262 CB6648_redo I 7251393 1 A T 9 1.00 63 62 6 6 12 @.....,ttTTtt point 0 nongenic,nongenic,nongenic -112 upstream,-139 upstream,-545 upstream {R06C7.7b},{R06C7.7a.1},{R06C7.8} 263 CB6648_redo I 7301404 1 C G 255 1.00 63 62 0 33 33 @ggGgGggggggGgGgggGGGgggggggggGGgg point 0 missense GGC->GCC[Gly->Ala] {F13G3.5a,F13G3.5b.1,F13G3.5b.2} 264 CB6648_redo I 7363706 1 A G 37 1.00 63 62 1 5 6 @,GGGGg point 0 nongenic,nongenic -4607 upstream,3317 into {F07A5.4.2},{F07A5.5} 265 CB6648_redo I 7428554 1 T C 255 1.00 63 62 0 48 48 @cCCCCcccccCCCcccCcCCcCCCcccCcCCCCCCccccCCCCccCCc point 0 SNP none {haw7535} 266 CB6648_redo I 7547117 1 A T 255 1.00 63 62 0 21 21 @TtTTTTTTTtTTTtTTtTtTt point 0 SNP none {haw7629} 267 CB6648_redo I 7547127 1 A T 255 1.00 63 62 0 23 23 @TTTTTtTTTtTTtTtTtTTTTTt point 0 SNP none {haw7630} 268 CB6648_redo I 7547365 1 C A 255 1.00 63 62 0 31 31 @aaaAaaAAaaaaAaAAAaaAaaaaaAaaaaa point 0 SNP none {haw7631} 278 CB6648_redo I 7799575 1 C T 255 1.00 63 62 0 23 23 @TTTTTTttTtTtTttTttTTTTt point 0 nongenic,nongenic -6041 upstream,870 downstream {D2005.6},{D2005.2} 279 CB6648_redo I 7869008 1 T A 168 1.00 63 62 0 7 7 @AAAAaAa point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -1095 upstream,-749 upstream,2533 into,2614 into,2657 into,2659 into,2668 into,2832 into,2883 into {R11A5.6},{R11A5.4c.1},{R11A5.4d.5},{R11A5.4a.1,R11A5.4a.2,R11A5.4b.2},{R11A5.4c.2},{R11A5.4c.3,R11A5.4d.1,R11A5.4d.3,R11A5.4d.4,R11A5.4d.6},{R11A5.4d.2},{R11A5.4c.4},{R11A5.4b.1} 280 CB6648_redo I 7869009 1 C T 150 1.00 63 62 0 7 7 @TTTTtTt point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -1096 upstream,-748 upstream,2534 into,2615 into,2658 into,2660 into,2669 into,2833 into,2884 into {R11A5.6},{R11A5.4c.1},{R11A5.4d.5},{R11A5.4a.1,R11A5.4a.2,R11A5.4b.2},{R11A5.4c.2},{R11A5.4c.3,R11A5.4d.1,R11A5.4d.3,R11A5.4d.4,R11A5.4d.6},{R11A5.4d.2},{R11A5.4c.4},{R11A5.4b.1} 281 CB6648_redo I 7879475 1 C T 255 1.00 63 62 0 10 10 @tTTTTTTtTt point 0 SNP none {haw7930} 282 CB6648_redo I 7879517 1 G A 246 1.00 63 62 0 10 10 @aAaaAAAAAa point 0 nongenic,nongenic -3962 upstream,-4828 upstream {R11A5.7.1},{F55D12.1} 283 CB6648_redo I 7879522 1 A T 255 1.19 63 62 0 18 18 @tTttTTTTTtTTTTtTTT point 0 nongenic,nongenic -3967 upstream,-4823 upstream {R11A5.7.1},{F55D12.1} 284 CB6648_redo I 8145316 1 C A 255 1.00 63 62 0 45 45 @AAaaaaAAAAaaAAAAAAAaaaAaaAaAAaaaAaaaaAaAAaAaA point 0 nongenic,nongenic -2104 upstream,-2784 upstream {T28B8.2},{T28B8.5} 285 CB6648_redo I 8202408 1 G T 255 1.00 63 62 0 39 39 @ttttttTTttttTtTttTTTtTttTTtTTTTTttttTTt point 0 nongenic,nongenic,nongenic,nongenic -19481 upstream,-3045 upstream,6072 into,6326 into {F08A10.2},{F08A10.1b,F08A10.1c},{F08A10.1a,F08A10.1e},{F08A10.1d} 286 CB6648_redo I 8213805 1 T A 255 8.94 63 62 0 28 28 @aAAAAaAAAaaAaAaAAaaAAaAAaAAA point 0 nongenic,nongenic,nongenic,nongenic,nongenic -597 upstream,-885 upstream,1387 into,1446 into,493 into {T02E1.3a,T02E1.3c},{T02E1.3b},{T02E1.5a},{T02E1.5b},{T02E1.5c} 288 CB6648_redo I 8303619 1 T C 255 1.00 63 62 0 31 31 @CccCcCcccCcccCCCccCcCCccCCCCCCc point 0 nongenic,nongenic,nongenic 2796 into,2878 into,3940 into {F52B5.1c},{F52B5.1b},{F52B5.1a} 4001 CB6648_redo I 8347873 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @,,..aa indel 0 nongenic,nongenic -1857 upstream,-5530 upstream {C34B7.3},{F16D3.1} 297 CB6648_redo I 9039720 1 A G 255 1.00 63 62 0 24 24 @ggGGGgGggGgGGGgGgGgGGGgG point 0 SNP none {haw8746} 298 CB6648_redo I 9097713 1 C T 255 1.00 63 62 0 32 32 @TTtTttTTTttTttTTttTTTTTtttttTTtt point 0 nongenic,nongenic -11494 upstream,1765 into {T06D10.3},{W10D5.1} 160781 CB6648_redo I 9205275 55 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered,uncovered non-exonic, 395 to 450 bp into,non-exonic, 5000 to 5055 bp into,non-exonic, 5002 to 5057 bp into {F25H5.1c.2},{F25H5.1a,F25H5.1c.3,F25H5.1f},{F25H5.1c.1} 299 CB6648_redo I 9235193 1 C T 255 1.00 63 62 0 36 36 @TtTtTTTttTtttTTTtTTtTTTTttTtTtttttTt point 0 SNP none {haw8914} 300 CB6648_redo I 9235318 1 G A 255 1.00 63 62 0 27 27 @aAAAAAaaaAAAaAAAAaAAAAaAAAa point 0 SNP none {haw8915} 301 CB6648_redo I 9235427 1 G A 255 1.00 63 62 0 22 22 @aAaAAaAAaAAaAaAAaAAAaa point 0 nongenic,nongenic,nongenic -1877 upstream,1258 into,758 into {VF36H2L.1},{F36H2.1b},{F36H2.1a,F36H2.1c} 302 CB6648_redo I 9246865 1 C G 255 1.00 63 62 0 48 48 @gGGGggGGgGGggGgggggGGGggGggGGgggggGgggGgGgGgGgGg point 0 missense,SNP CGT->CCT[Arg->Pro],none {F36H2.2},{haw8926} 303 CB6648_redo I 9246866 1 G C 255 1.00 63 62 0 48 48 @CCCccCCcCCccCcccccCCCccCccCCcccccCcccCcCcCcCcCcc point 0 missense,SNP CGT->GGT[Arg->Gly],none {F36H2.2},{haw8927} 304 CB6648_redo I 9346153 1 A C 237 1.00 63 62 0 10 10 @cCcCCCcccc point 0 nongenic,nongenic -3665 upstream,1439 into {C12C8.3a,C12C8.3b},{M04C9.2} 305 CB6648_redo I 9346156 1 T C 171 1.00 63 62 0 7 7 @CCCcccc point 0 nongenic,nongenic -3668 upstream,1442 into {C12C8.3a,C12C8.3b},{M04C9.2} 306 CB6648_redo I 9357394 1 A G 255 1.00 63 62 0 25 25 @ggggggggggggGGgGgGgggGggG point 0 nongenic,nongenic -1671 upstream,-323 upstream {M04C9.5a},{M04C9.4} 308 CB6648_redo I 9384409 1 C A 73 1.00 63 62 0 16 16 @GGggGgAAAAAAaaaa point 0 nongenic,nongenic 5217 into,5900 into {F16A11.3a,F16A11.3b,F16A11.3c},{F16A11.3d} 309 CB6648_redo I 9384410 1 C G 88 1.00 63 62 0 14 14 @aaAaGGGGGGgggg point 0 nongenic,nongenic 5216 into,5899 into {F16A11.3a,F16A11.3b,F16A11.3c},{F16A11.3d} 310 CB6648_redo I 9457731 1 G A 255 1.00 63 62 0 36 36 @AAaAaAAAAaAaaaAaaAAAaaAaaAaAaaaAAAaA point 0 SNP none {haw9060} 311 CB6648_redo I 9573999 1 T C 255 1.00 63 62 0 40 40 @cccCCCCccCcccccccCccCCccCccccccCccCcccCc point 0 nongenic,nongenic,nongenic,nongenic,nongenic -5777 upstream,162 into,180 into,370 into,794 downstream {C36F7.4d},{C36F7.4a.1},{C36F7.4a.2},{C36F7.4b,C36F7.4c},{C36F7.5} 312 CB6648_redo I 9699160 1 T C 255 1.00 63 62 0 42 42 @CccCCCCCCcccccCCcCCcCccCccccCCCcCcCCCcccCc point 0 missense,SNP AAT->AGT[Asn->Ser],none {C04F12.8},{haw9282} 313 CB6648_redo I 9737906 1 C A 255 1.00 63 62 0 29 29 @aaAAaAaaaAaAAaaAAaaaAAaAaaaaA point 0 SNP none {haw9323} 322 CB6648_redo I 9830825 1 C T 255 1.00 63 62 0 33 33 @tTTTTTtttTTtTtTTTttTtTtTtTTTTTTTT point 0 nongenic,nongenic -572 upstream,-8762 upstream {Y67A6A.1},{Y67A6A.2a,Y67A6A.2b.1,Y67A6A.2b.2} 323 CB6648_redo I 9940580 1 A T 255 1.00 63 62 0 43 43 @tTtttTTTttTttTtTTTTtTtTTtttTtTTTtTTtTttTTTT point 0 SNP none {haw9585} 324 CB6648_redo I 9952384 1 C G 68 1.00 63 62 2 5 7 @gGGgg., point 0 nongenic,nongenic,nongenic -14093 upstream,346 into,990 into {Y106G6A.1},{T24D1.1a},{T24D1.1b} 325 CB6648_redo I 9997302 1 C T 255 1.00 63 62 0 33 33 @TttTTTTttTTtTtttttTTtttttttttttTt point 0 nongenic,nongenic -17422 upstream,2583 into {C03C11.1},{T23D8.8} 326 CB6648_redo I 10109254 1 T A 255 1.00 63 62 0 36 36 @AAaaAaaaaaAaAaaaAAAaaAaaAAaAaaAaAAAa point 0 SNP none {haw9645} 4012 CB6648_redo I 10113279 0 X X -1000 -999.99 -1000 -1000 6 0 6 @.,,.,,Tt indel 0 inframe none {Y106G6D.3} 338 CB6648_redo I 10188886 1 T C 255 1.75 63 62 0 32 32 @cccccccccCccCccCccCCcccCCCccCCCC point 0 silent AAA->AAG[Lys->Lys] {C25A1.10a,C25A1.10b} 342 CB6648_redo I 10205458 1 A C 60 2.00 37 6 0 5 5 @CCCcc point 0 nongenic -5028 upstream {Y106G6E.1} 352 CB6648_redo I 10243054 1 G A 98 1.00 63 62 2 5 7 @AaAAa,. point 0 nongenic,nongenic -11848 upstream,-5223 upstream {Y106G6E.6.1},{ZC247.3} 354 CB6648_redo I 10270191 1 A C 3 6.19 0 0 25 42 67 @CCCCC.CCcCCcCCccCC,cc.cccCCC,CCCCc,,CCCC,CC.CC,C,,C.,CC,..,,,,,,,.. point 0 missense TTC->GTC[Phe->Val] {ZC247.1} 373 CB6648_redo I 10462796 1 G C 3 1.31 63 2 1 3 4 @ccC. point 0 nongenic -7172 upstream {Y106G6H.9} 374 CB6648_redo I 10462798 1 G A 61 1.00 63 2 0 4 4 @aAAa point 0 nongenic -7174 upstream {Y106G6H.9} 375 CB6648_redo I 10462800 1 A G 134 1.00 63 32 0 6 6 @gGGggg point 0 nongenic -7176 upstream {Y106G6H.9} 376 CB6648_redo I 10489711 1 G C 9 1.00 63 62 5 5 10 @,,.,,CccCc point 0 nongenic,nongenic -11877 upstream,730 downstream {F37D6.6},{F37D6.4} 378 CB6648_redo I 10595968 1 T C 255 1.00 63 62 0 46 46 @CccCcCCcCCccCCCccCCCCCCccccCCCCCcCccCccCcCCCCc point 0 nongenic,nongenic -2730 upstream,1506 into {T22A3.5},{T22A3.6} 382 CB6648_redo I 10946879 1 T A 3 8.69 0 4 3 125 128 @AAAAAAAAAAAAaAAAaAAAaAAAAAAAaAAAaAaAAaaAaa.aAaaAa.aaAAAaaAAaAAAAAAaaAaaaAAaaaaaAaaaAAAaAA,AAAaaAAAA point 0 SNP none {uCE1-1097} 401 CB6648_redo I 10971070 1 C G 77 1.00 63 62 25 29 54 @G.GG..g.G.gGgggg...g.g.,.GGG.G,gGGgg,G.gg.G...GG,,G... point 0 nongenic,nongenic,nongenic -910 upstream,-945 upstream,585 into {Y52B11A.2a,Y52B11A.2b},{Y52B11A.3b},{Y52B11A.3a} 402 CB6648_redo I 10978887 1 A G 255 1.00 63 62 0 31 31 @gggGggGggGGggGgggGggggGgggggggg point 0 silent,SNP TCA->TCG[Ser->Ser],none {Y52B11A.3a,Y52B11A.3b},{haw9930} 403 CB6648_redo I 11001775 1 C A 255 1.00 63 62 0 20 20 @aaAAAaaAAAaAaaaAAaAa point 0 nongenic,nongenic -13703 upstream,2502 into {Y52B11A.5},{Y52B11A.4} 405 CB6648_redo I 11220200 1 C A 255 1.00 63 62 0 42 42 @AAAAaAAaAaaaAAAaAaAaaAaaAAaAaAaaaAAAAaaaaA point 0 SNP none {haw10216} 406 CB6648_redo I 11254266 1 A G 3 6.06 0 2 18 30 48 @,TGG.GGGGGGG,,GGG,GGGGGG,,G,,G,,,G,,,,,g,GGGGGGG point 0 nongenic,nongenic -9270 upstream,925 into {F46A8.6},{F46A8.10} 4021 CB6648_redo I 11505539 0 X X -1000 -999.99 -1000 -1000 6 -1 5 @,...,,aAAaA indel 0 nongenic,nongenic,nongenic -1582 downstream,-4518 upstream,-5893 upstream {F32B4.8},{F32B4.1},{K08C9.6} 411 CB6648_redo I 11522478 1 T G 43 1.00 63 62 1 4 5 @gGGG, point 0 nongenic,nongenic,nongenic,nongenic -1826 upstream,-253 upstream,4075 into,656 into {F32B4.5},{F32B4.4a},{F32B4.4b.1},{F32B4.4b.2} 412 CB6648_redo I 11603465 1 A G 255 1.06 63 62 0 26 26 @ggGgGggGGgGGgggGgggGgGGGgg point 0 SNP none {haw10691} 413 CB6648_redo I 11628456 1 A G 238 2.00 63 62 0 22 22 @gggggGGgGggGgggGgggggg point 0 nongenic -1174 upstream {W04G5.3} 414 CB6648_redo I 11659706 1 G C 6 1.62 63 2 1 4 5 @.CCcc point 0 nongenic -16224 upstream {F11A6.1a.2} 415 CB6648_redo I 11713508 1 C T 119 2.69 63 62 11 17 28 @ttttttTtTTtTttt,,,,,,,,t,.,t point 0 SNP none {haw10896} 4024 CB6648_redo I 11880752 0 X X -1000 -999.99 -1000 -1000 1 1 2 @.cc indel 0 nongenic,nongenic,nongenic -12656 upstream,-2959 downstream,-4270 upstream {Y47H9C.4a,Y47H9C.4b,Y47H9C.4c},{Y47H9C.5a},{Y47H9C.5b} 418 CB6648_redo I 11883806 1 G C 255 8.00 63 62 0 25 25 @CccccCCcCCccCcCcCcCcCcccc point 0 nongenic,nongenic,nongenic -1215 upstream,-15710 upstream,3453 into {Y47H9C.5b},{Y47H9C.4a,Y47H9C.4b,Y47H9C.4c},{Y47H9C.5a} 419 CB6648_redo I 11905377 1 T C 255 1.00 63 62 0 43 43 @CCcCccCCcCccCcCCCcCcCccCCccccCCCCCccCCcCCCc point 0 SNP none {haw11247} 420 CB6648_redo I 11975955 1 A T 255 3.50 63 62 0 31 31 @tttttttttttTttTttttTttTtTtttttT point 0 nongenic,nongenic -3474 upstream,-4167 upstream {Y53C10A.4},{Y53C10A.15} 421 CB6648_redo I 11975961 1 C A 255 3.50 63 62 0 32 32 @aaagaaaAaaAaaaaAaaAaAaaaaaAAaAAA point 0 nongenic,nongenic -3468 upstream,-4173 upstream {Y53C10A.4},{Y53C10A.15} 422 CB6648_redo I 11988102 1 C T 255 1.00 63 62 0 31 31 @tttTTtTTTtTtTtttTtttttttTTTttTt point 0 SNP none {haw11443} 423 CB6648_redo I 12093640 1 T A 108 2.19 63 62 21 44 65 @,,,,.,,,,...AAAAAaaaaAAaAAAa,AAAAAAAAAAAAAAAAaAAaA,AAAAA,,A,,,A.. point 0 nongenic,nongenic -3680 upstream,831 into {Y47H10A.3},{Y47H10A.4} 426 CB6648_redo I 12479794 1 G T 160 5.75 63 62 0 8 8 @TTTTTTTt point 0 nongenic,nongenic -1216 upstream,-4375 upstream {T27F6.2},{T27F6.4} 427 CB6648_redo I 12479795 1 G T 158 5.75 63 62 0 8 8 @TTTTTTTt point 0 nongenic,nongenic -1217 upstream,-4374 upstream {T27F6.2},{T27F6.4} 428 CB6648_redo I 12479871 1 A G 83 1.38 63 62 2 6 8 @GGGGGG.. point 0 nongenic,nongenic -1293 upstream,-4298 upstream {T27F6.2},{T27F6.4} 429 CB6648_redo I 12676428 1 G T 46 1.00 63 62 2 5 7 @,TTtT.T point 0 nongenic -2771 upstream {T26E3.2} 433 CB6648_redo I 12862392 1 T A 255 1.00 63 62 0 44 44 @AaaAAAAAaaaaAAaaaaaaaAAaaaAaaaAaaAAAAaAaAaAa point 0 SNP none {haw13170} 434 CB6648_redo I 12871730 1 T C 255 1.00 63 62 0 44 44 @ccccccCcCcCCcCCcCCcccCCCCcCCcCCccCCcccCccCcc point 0 nongenic,nongenic -2184 upstream,-6853 upstream {Y18D10A.23},{Y18D10A.13} 435 CB6648_redo I 12871733 1 T C 255 1.00 63 62 0 44 44 @cccCcCcCCcCCcCCcccCCCCcCCcCCccCCcccCccCccccC point 0 SNP none {uCE1-1387} 436 CB6648_redo I 12880362 1 G C 7 1.00 63 62 6 9 15 @,,,,,.cccccCccC point 0 nongenic,nongenic -10816 upstream,1779 into {Y18D10A.23},{Y18D10A.13} 443 CB6648_redo I 12899593 1 T G 16 6.75 0 0 0 8 8 @GGGGGGGG point 0 nongenic,nongenic -30047 upstream,3178 into {Y18D10A.23},{Y18D10A.13} 444 CB6648_redo I 12910874 1 C T 110 1.69 63 62 0 20 20 @tTttTTttTTTTTTTTtTTT point 0 nongenic -5555 upstream {Y18D10A.25} 445 CB6648_redo I 12916972 1 G C 108 1.25 63 10 0 5 5 @CCCCC point 0 nongenic,nongenic -1735 upstream,543 into {Y18D10A.19.1},{Y18D10A.25} 446 CB6648_redo I 13015757 1 T C 255 1.00 63 62 0 30 30 @CCCCCccCCCccCcCcCCCccCcCCCCcCc point 0 nongenic,nongenic,nongenic,nongenic -17855 upstream,3550 into,4308 into,7524 into {W05B5.4},{ZK256.1b},{ZK256.1c},{ZK256.1a} 447 CB6648_redo I 13015767 1 T C 255 1.00 63 62 0 33 33 @ccCCCccCcCcCCCccCcCCCCcCccccCcccc point 0 nongenic,nongenic,nongenic,nongenic -17845 upstream,3560 into,4318 into,7514 into {W05B5.4},{ZK256.1b},{ZK256.1c},{ZK256.1a} 448 CB6648_redo I 13015797 1 T C 255 9.88 63 62 0 18 18 @cccCccccCCcccccCCc point 0 nongenic,nongenic,nongenic,nongenic -17815 upstream,3590 into,4348 into,7484 into {W05B5.4},{ZK256.1b},{ZK256.1c},{ZK256.1a} 450 CB6648_redo I 13059695 1 C A 255 1.00 63 62 0 44 44 @AaaaAAAAaAaaAAaAaaAaaAaaAAaaaAaaaaaAAaaaAAAa point 0 nongenic,nongenic,nongenic -7259 upstream,-81 upstream,2416 into {Y26D4A.2},{W05B5.3b.1},{W05B5.3a,W05B5.3b.2} 453 CB6648_redo I 13168446 1 C G 255 1.00 63 62 0 50 50 @GGGggGGgGggGgGgGggGGgggggggGgggggGGggggggGgggGgGgg point 0 missense,SNP CAC->GAC[His->Asp],none {F22G12.5},{haw13520} 456 CB6648_redo I 13419807 1 T A 255 1.00 63 62 0 29 29 @AaaaAaaaaAAaaAAaaAaAaAaaAAaaA point 0 SNP none {haw14087} 457 CB6648_redo I 13482732 1 G T 255 1.31 63 62 0 21 21 @tTtTtTtTTTTTTTtttTttT point 0 nongenic,nongenic,nongenic -6815 upstream,-8558 upstream,4661 into {Y48G10A.1.1},{Y48G10A.3},{Y48G10A.2} 460 CB6648_redo I 13529943 1 T G 30 2.00 63 12 0 4 4 @gggG point 0 nongenic,nongenic -4789 upstream,1250 into {Y87G2A.2},{Y87G2A.20} 461 CB6648_redo I 13529944 1 T G 13 2.00 63 30 0 4 4 @cgGg point 0 nongenic,nongenic -4788 upstream,1251 into {Y87G2A.2},{Y87G2A.20} 463 CB6648_redo I 13545462 1 T C 82 2.69 63 62 0 6 6 @cccCCc point 0 nongenic -285 upstream {Y87G2A.4} 464 CB6648_redo I 13553337 1 T A 255 1.00 63 62 0 36 36 @AAAaAaaaAAaAAaAAAAaAaaAaaAAaAAAaAaAa point 0 nongenic,nongenic,nongenic -7178 upstream,-8160 upstream,5276 into {Y87G2A.16},{Y87G2A.4},{Y87G2A.5} 467 CB6648_redo I 13584208 1 A C 255 2.81 63 62 0 38 38 @ccCccccccCCcccCCcccCCcccCCCCCcCcccCCCC point 0 nongenic 1077 into {Y87G2A.9} 4033 CB6648_redo I 13768972 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @..,,..TT indel 0 inframe none {Y6B3B.4} 470 CB6648_redo I 13860804 1 C T 255 1.00 63 62 0 39 39 @TttTTtGtTTtTtttTTGtttttttTTtttTTttttTTT point 0 SNP none {haw14642} 471 CB6648_redo I 13860835 1 G C 255 1.00 63 62 0 40 40 @cccCCcccCCccccCCCCcccCCccCCCCCcccCCCCCcC point 0 SNP none {haw14643} 473 CB6648_redo I 13985036 1 A G 255 1.00 63 62 0 31 31 @gGggGggggggGgGggGGGGGGGGggggGGg point 0 missense,SNP AAA->GAA[Lys->Glu],none {Y71A12B.17},{haw14760} 474 CB6648_redo I 14002230 1 T G 50 4.88 63 62 23 30 53 @GGGGG,gggGgGg.,GGG..GGGg,,g,GgGG,G,,,g,,,,,,,G,G,g,G, point 0 nongenic -2215 upstream {Y71A12B.12a.1} 476 CB6648_redo I 14002390 1 T G 246 7.88 63 62 29 66 95 @G,AGG..GGGGGAGGGG.......GG,G......GGGGG...,.......AGggg,gAAGgGGgGgGgGgGGgggggggggGggggGgGgggGGG point 0 SNP none {haw14764} 477 CB6648_redo I 14049137 1 T C 255 1.00 63 62 0 33 33 @CcCcccCcccCCcCCcCCCCCCCCCccCcCccc point 0 SNP none {uCE1-1488} 479 CB6648_redo I 14097922 1 T C 255 1.00 63 62 0 32 32 @cCCCCcccCCCCcCCCccccccCccccCcccc point 0 nongenic,nongenic,nongenic -1588 upstream,-3341 upstream,381 into {Y63D3A.2},{Y63D3A.5.1},{Y63D3A.4} 480 CB6648_redo I 14137809 1 A C 36 1.00 63 62 2 7 9 @tcc.gc.cc point 0 nongenic 4383 into {K03D10.1} 160786 CB6648_redo I 14137985 67 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 4140 to 4207 bp into {K03D10.1} 486 CB6648_redo I 14138265 1 T C 36 1.00 63 20 0 5 5 @CCCCC point 0 nongenic 3927 into {K03D10.1} 487 CB6648_redo I 14169346 1 A C 81 1.00 63 34 3 6 9 @CcCcCc,.. point 0 nongenic -2504 upstream {C37A5.11} 488 CB6648_redo I 14169348 1 T A 35 1.00 63 62 4 5 9 @aAaAa,... point 0 nongenic -2502 upstream {C37A5.11} 489 CB6648_redo I 14244891 1 G C 100 1.00 63 62 0 4 4 @cccC point 0 nongenic,nongenic -1323 upstream,-471 upstream {C49A1.6},{C49A1.10} 490 CB6648_redo I 14326084 1 C T 233 3.44 63 62 0 16 16 @tttttttttttttttt point 0 nongenic,nongenic -4987 upstream,2830 into {F49B2.6},{F49B2.5} 493 CB6648_redo I 14347419 1 C A 255 1.00 63 62 0 17 17 @aAAaAAaAaaaaAaaAA point 0 nongenic,nongenic -3626 upstream,81 downstream {Y105E8A.1},{Y105E8A.2} 494 CB6648_redo I 14349944 1 A C 27 1.00 63 20 3 4 7 @.,,CCCC point 0 nongenic,nongenic,nongenic -6151 upstream,-8566 upstream,2444 into {Y105E8A.1},{Y105E8A.3},{Y105E8A.2} 501 CB6648_redo I 14362092 1 G T 255 1.00 63 62 0 44 44 @TTTttttTTttttTTTTttTttTTtTtTTTTtttttTttTTTtt point 0 SNP none {haw15184} 502 CB6648_redo I 14363822 1 A T 255 4.69 63 62 0 38 38 @ttTttTtttttttTttTttTTTtttTtTtttTTTTttT point 0 nongenic,nongenic -5509 upstream,3757 into {Y105E8A.2},{Y105E8A.3} 503 CB6648_redo I 14363832 1 T C 255 4.25 63 62 0 37 37 @cccccccCccCccCCCcccCcCcccCCCCccCCCCcc point 0 nongenic,nongenic -5519 upstream,3747 into {Y105E8A.2},{Y105E8A.3} 160788 CB6648_redo I 14391797 65 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1477 to 1542 bp into {Y105E8A.7a,Y105E8A.7b} 160789 CB6648_redo I 14425421 266 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered,uncovered,uncovered non-exonic, 3021 to 3287 bp into,non-exonic, 3254 to 3520 bp into,non-exonic, 7193 to 7459 bp into,non-exonic, 7237 to 7503 bp into {Y105E8A.10c.1},{Y105E8A.10b},{Y105E8A.10c.2},{Y105E8A.10a} 507 CB6648_redo I 14431046 1 C A 255 1.00 63 62 0 19 19 @AaaAAaAAaaaAaaAAAaA point 0 SNP none {haw15294} 512 CB6648_redo I 14480479 1 G A 255 1.00 63 62 0 39 39 @aAAAAAAAAAAaAAAAAaAAAaaAaaAaaaAaaAAAAaa point 0 SNP none {haw15337} 513 CB6648_redo I 14518026 1 C G 255 1.38 63 62 0 37 37 @GgGggGGGGGGGgGgGgGGGggggGGGGgGGGgGGGG point 0 SNP none {haw15420} 514 CB6648_redo I 14574065 1 A G 255 1.94 63 62 0 41 41 @GGGgggGggggGGGgGggGGGGGGggGGGggggGGgGGGgg point 0 nongenic,nongenic,nongenic -8233 upstream,4561 into,6747 into {Y105E8A.23a,Y105E8A.23b},{Y105E8A.24b},{Y105E8A.24a} 515 CB6648_redo I 14586339 1 A C 255 1.00 63 62 0 31 31 @CCcCccCcCcCCCCCcccCcCCcCCcccCcc point 0 SNP none {haw15496} 516 CB6648_redo I 14610358 1 C T 252 2.19 63 62 0 31 31 @ttttttttttttttttttttttttttttttT point 0 nongenic -6231 upstream {Y105E8A.25} 517 CB6648_redo I 14610387 1 G C 242 1.31 63 62 0 18 18 @ccccccccccCCCCCCCc point 0 nongenic -6260 upstream {Y105E8A.25} 518 CB6648_redo I 14610397 1 G A 85 1.94 63 18 0 18 18 @aaaAAAAAAAaaaaaaaa point 0 nongenic -6270 upstream {Y105E8A.25} 519 CB6648_redo I 14610399 1 C T 18 2.06 63 54 0 16 16 @TTTTGTTtttttgttt point 0 nongenic -6272 upstream {Y105E8A.25} 520 CB6648_redo I 14610406 1 A G 159 1.88 63 62 0 17 17 @GGGGGGgggggggggGG point 0 nongenic -6279 upstream {Y105E8A.25} 521 CB6648_redo I 14610408 1 T C 205 1.75 63 62 0 19 19 @CCCCCCcccccccccCCCc point 0 nongenic -6281 upstream {Y105E8A.25} 522 CB6648_redo I 14610447 1 A G 255 1.06 63 62 0 28 28 @gGGGggGgGGGGGGGGGGGGGGGGGGGG point 0 nongenic -6320 upstream {Y105E8A.25} 523 CB6648_redo I 14675915 1 A T 255 1.00 63 62 0 46 46 @TTtTTTNTTtttTtttTTttTtTtTTTTTTTTttTTttTtTttttT point 0 SNP none {haw15602} 524 CB6648_redo I 14685394 1 G T 160 9.94 63 62 1 20 21 @,TTTTtttTTtTTTtttTtTt point 0 nongenic -2843 upstream {Y105E8B.9} 527 CB6648_redo I 14918627 1 A C 255 1.00 63 62 0 26 26 @cccCCccCCcCCcCcCCcccCccCCc point 0 SNP none {haw15977} 528 CB6648_redo I 14952119 1 A C 21 1.00 63 20 2 3 5 @CCC.. point 0 nongenic,nongenic,nongenic -1355 upstream,564 downstream,680 downstream {ZK909.3.1},{ZK909.2a,ZK909.2f,ZK909.2g,ZK909.2h.1,ZK909.2h.2,ZK909.2l,ZK909.2m},{ZK909.2j} 529 CB6648_redo I 15040328 1 T C 255 1.00 63 62 0 25 25 @cccccCCCCcCCCCCcCCCccCccc point 0 silent,SNP ATT->ATC[Ile->Ile],none {F31C3.2a,F31C3.2b},{haw16048} 530 CB6648_redo I 15067997 1 A G 255 1.38 63 62 2 253 255 @GGGGGGGtgGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGtGGGGGGGGGGGGGGGGGGGGGGGGGGGgGGGGGG point 0 ncRNA,SNP none,none {F31C3.9},{snp_F31C3[4]} 550 CB6648_redo I 15071578 1 C G 12 3.00 0 12 0 4 4 @GGGG point 0 nongenic -12587 upstream {F31C3.6a} 551 CB6648_redo I 15071623 1 G A 3 2.75 0 2 0 21 21 @AATAAAAAAAAAAAAAAAAAA point 0 nongenic -12632 upstream {F31C3.6a} 552 CB6648_redo I 15071625 1 C G 3 2.69 0 2 0 22 22 @GGTGGGGGGGGGGGGGGGGGGG point 0 nongenic -12634 upstream {F31C3.6a} 553 CB6648_redo I 15071631 1 A G 3 2.62 0 2 0 19 19 @GGGGGGTGGGTGGGGGGGG point 0 nongenic -12640 upstream {F31C3.6a} 554 CB6648_redo I 15071665 1 A G 16 2.75 0 0 0 9 9 @GGGGGGGGG point 0 nongenic -12674 upstream {F31C3.6a} 555 CB6648_redo I 15071666 1 G A 16 2.75 0 0 0 9 9 @AAAAAAAAA point 0 nongenic -12675 upstream {F31C3.6a} 556 CB6648_redo I 15071667 1 A G 16 2.75 0 2 0 9 9 @GGGGGGGGG point 0 nongenic -12676 upstream {F31C3.6a} 557 CB6648_redo I 15071668 1 G A 3 2.75 0 16 1 8 9 @AAAAAAA,A point 0 nongenic -12677 upstream {F31C3.6a} 558 CB6648_redo I 15071671 1 C G 16 2.75 0 2 0 9 9 @GGGGGGGGG point 0 nongenic -12680 upstream {F31C3.6a} 559 CB6648_redo I 15071724 1 A G 3 3.88 19 2 1 148 149 @GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG point 0 nongenic -12733 upstream {F31C3.6a} 4037 CB6648_redo I 15071784 0 X X -1000 -999.99 -1000 -1000 185 -182 3 @,,,,,,,C,,,,,,,,,,C,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, indel 4 nongenic -12793 upstream {F31C3.6a} 160792 CB6648_redo II 503921 680 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1413 to 2093 bp into {T27A1.1} 560 CB6648_redo II 505421 1 G C 18 1.00 63 38 4 9 13 @CCCCCccCC.,.. point 0 nongenic 593 into {T27A1.1} 4040 CB6648_redo II 595628 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @,,....aa indel 0 nongenic,nongenic,nongenic,nongenic,nongenic -300 downstream,-419 downstream,-423 downstream,-926 upstream,-9849 upstream {W04H10.3a,W04H10.3b.3},{W04H10.3b.2},{W04H10.3b.1},{W08F4.11},{W04H10.2} 562 CB6648_redo II 595629 1 G T 8 1.00 63 62 3 6 9 @TTtttt... point 0 nongenic,nongenic,nongenic,nongenic,nongenic -927 upstream,-9847 upstream,302 into,421 into,425 into {W08F4.11},{W04H10.2},{W04H10.3a,W04H10.3b.3},{W04H10.3b.2},{W04H10.3b.1} 577 CB6648_redo II 777128 1 G A 255 1.75 63 62 0 30 30 @aAAAAaAaAAAaAAaAaaaaaaAaaAaAaA point 0 nongenic 406 downstream {Y39F10A.1} 579 CB6648_redo II 935804 1 A G 255 1.00 63 62 0 34 34 @gGGGGgGGgGggGgGGGgGgGggggGggGGGggG point 0 silent AAA->AAG[Lys->Lys] {R07C3.4} 580 CB6648_redo II 959061 1 A T 255 1.00 63 62 0 52 52 @TtTttTtttttTtTttTTTTtTtttTttttttTTtttTTTTTTTTTtTtTTt point 0 nongenic,nongenic -1472 upstream,95 into {C32B5.7},{C32B5.16} 582 CB6648_redo II 1221570 1 T G 23 1.00 63 62 7 7 14 @,,,,,,.GgGgGGg point 0 nongenic,nongenic -2786 upstream,9217 into {F53A10.2c},{F53A10.2a} 583 CB6648_redo II 1221572 1 G A 69 1.00 63 22 6 8 14 @,,,,,.AaAaAAaa point 0 SNP none {haw17694} 584 CB6648_redo II 1323342 1 T C 3 1.00 63 62 3 4 7 @CCCC.., point 0 nongenic,nongenic,nongenic -3658 upstream,248 downstream,474 downstream {F56D12.4a},{F56D12.5a.1},{F56D12.5b} 585 CB6648_redo II 1333323 1 C G 255 1.44 63 62 0 29 29 @gggggGgGggGggGggggGGGGgGGGGGG point 0 nongenic,nongenic -3747 upstream,6323 into {F56D12.4b,F56D12.4c.2},{F56D12.4a} 586 CB6648_redo II 1392498 1 T C 255 1.00 63 62 0 43 43 @cCCccCcccCCCcccccccccCcCCcccCccccccccCccccC point 0 nongenic,nongenic 924 downstream,995 downstream {F54D12.3},{F54D12.11} 593 CB6648_redo II 1605235 1 C T 66 3.94 63 62 25 73 98 @TTtTTt...t...t,T..TTtttttT.tt.ttt.tttt,...ttttt.ttTttttttt.tTtttttttttttttt.ttttttttt.ttttt...t..T point 0 nongenic,nongenic 566 into,620 downstream {C08E3.3},{T07H3.1} 594 CB6648_redo II 1637578 1 C G 255 1.00 63 62 0 21 21 @gGGGGgGgggGGggGggGGGG point 0 nongenic 884 into {ZC204.4a,ZC204.4b} 595 CB6648_redo II 1637579 1 G C 255 1.00 63 62 0 21 21 @cCCCCcCcccCCccCccCCCC point 0 nongenic 885 into {ZC204.4a,ZC204.4b} 596 CB6648_redo II 1804984 1 T A 255 10.00 63 62 0 47 47 @aAAAaAAAAaAaAAaaaaaaaaaaaaaaaaaaaaAaaaaAaaaaAAa point 0 nongenic 825 into {C08F1.8} 597 CB6648_redo II 1848045 1 G C 73 1.00 63 62 1 7 8 @,ccccccc point 0 missense CCC->GCC[Pro->Ala] {C52E2.6} 598 CB6648_redo II 1850708 1 T C 255 1.00 63 62 0 45 45 @cCcCccCccCccccCCcCccCcccCCcCCCcCCCCcccCCccCcc point 0 nongenic,nongenic -307 upstream,-537 upstream {C52E2.7},{C52E2.3} 4046 CB6648_redo II 1862307 1 X X -1000 -999.99 -1000 -1000 6 -4 2 @,...t.ttttttT. indel -1 nongenic,nongenic -328 upstream,899 downstream {C16C4.6},{C16C4.7} 601 CB6648_redo II 1862310 1 A C 32 1.94 63 12 5 9 14 @cccc.t.cc.,cc. point 0 nongenic,nongenic -325 upstream,902 downstream {C16C4.6},{C16C4.7} 4047 CB6648_redo II 1906690 0 X X -1000 -999.99 -1000 -1000 10 0 10 @..,,,..,,,GGg indel 0 nongenic,nongenic -1473 upstream,628 downstream {F52C6.5},{C46F9.1} 602 CB6648_redo II 1906691 1 G T 32 1.62 63 22 5 10 15 @ttTTTttTTT,,... point 0 nongenic,nongenic -1471 upstream,629 downstream {F52C6.5},{C46F9.1} 603 CB6648_redo II 1926841 1 T C 69 1.00 63 2 1 4 5 @cCCC. point 0 silent GCT->GCC[Ala->Ala] {F52C6.2.1,F52C6.2.2,F52C6.2.3,F52C6.2.4} 604 CB6648_redo II 1926842 1 C T 40 1.00 63 2 2 3 5 @tT,T. point 0 missense CCG->TCG[Pro->Ser] {F52C6.2.1,F52C6.2.2,F52C6.2.3,F52C6.2.4} 605 CB6648_redo II 1926844 1 G C 3 1.00 63 40 1 3 4 @CCC. point 0 silent CCG->CCC[Pro->Pro] {F52C6.2.1,F52C6.2.2,F52C6.2.3,F52C6.2.4} 607 CB6648_redo II 2001658 1 A C 237 2.00 63 62 2 28 30 @cCCcCC.cccCCccCCccccCCcC.CccCC point 0 nongenic,nongenic -1719 upstream,-836 upstream {F59H6.5},{C40D2.4} 4048 CB6648_redo II 2037271 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,,,Ttt indel 0 nongenic -1483 downstream {F59H6.1} 610 CB6648_redo II 2190806 1 T C 255 1.00 63 62 0 54 54 @ccccCCCCCCcCcCCccCccCccCccCCcCcCcCCcCCCccccCCCCCcccccC point 0 nongenic -1347 upstream {C33C12.9} 611 CB6648_redo II 2225250 1 G T 154 2.19 63 62 0 11 11 @TTtttTTTTTT point 0 nongenic,nongenic,nongenic,nongenic -1708 upstream,460 into,462 into,569 downstream {F54A3.4},{F54A3.5.2},{F54A3.5.1},{F54A3.6} 612 CB6648_redo II 2225256 1 A T 78 1.75 63 62 0 4 4 @TTTt point 0 nongenic,nongenic,nongenic,nongenic -1714 upstream,454 into,456 into,563 downstream {F54A3.4},{F54A3.5.2},{F54A3.5.1},{F54A3.6} 614 CB6648_redo II 2225263 1 A C 40 1.00 63 10 0 7 7 @tcccccc point 0 nongenic,nongenic,nongenic,nongenic -1721 upstream,447 into,449 into,556 downstream {F54A3.4},{F54A3.5.2},{F54A3.5.1},{F54A3.6} 615 CB6648_redo II 2225268 1 G T 150 1.00 63 34 0 18 18 @ttttttttttTtTTcttt point 0 nongenic,nongenic,nongenic,nongenic -1726 upstream,442 into,444 into,551 downstream {F54A3.4},{F54A3.5.2},{F54A3.5.1},{F54A3.6} 616 CB6648_redo II 2225271 1 A C 185 1.00 63 62 1 22 23 @cccccctc.cCcCCtcccccCtc point 0 nongenic,nongenic,nongenic,nongenic -1729 upstream,439 into,441 into,548 downstream {F54A3.4},{F54A3.5.2},{F54A3.5.1},{F54A3.6} 617 CB6648_redo II 2472169 1 C T 235 1.00 63 62 0 26 26 @tttttttttttttttttttttttttt point 0 SNP none {haw20431} 4052 CB6648_redo II 2678738 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @,,,,Aa indel 0 inframe none {F22E5.17} 621 CB6648_redo II 2703217 1 C T 255 1.00 63 62 0 26 26 @TttttTttttTTTttttTTttttTTt point 0 nongenic,nongenic -359 upstream,203 downstream {Y47G7B.3},{Y47G7B.1} 624 CB6648_redo II 2799760 1 A T 205 1.00 63 62 0 8 8 @TTtTTTTT point 0 SNP none {haw21113} 625 CB6648_redo II 2843349 1 G C 77 1.00 63 62 2 4 6 @c,cCC. point 0 nongenic -161 upstream {Y110A2AL.7} 626 CB6648_redo II 2881248 1 A G 25 1.00 63 20 7 10 17 @gggggggggg,,,,,,, point 0 nongenic,nongenic 2296 into,678 into {Y110A2AL.12a},{Y110A2AL.12b} 627 CB6648_redo II 2881249 1 T C 20 1.00 63 24 7 9 16 @ccccccccc,,,,,,, point 0 nongenic,nongenic 2297 into,677 into {Y110A2AL.12a},{Y110A2AL.12b} 628 CB6648_redo II 2881289 1 T G 15 1.00 63 0 0 6 6 @GGGGGG point 0 nongenic,nongenic 2337 into,637 into {Y110A2AL.12a},{Y110A2AL.12b} 629 CB6648_redo II 2897370 1 A G 3 4.69 0 2 1 33 34 @ggggggg,gggggggggggggggggggggggggg point 0 nongenic,nongenic -2975 upstream,637 into {Y110A2AL.14.1},{Y110A2AM.3} 632 CB6648_redo II 2897879 1 A T 111 5.31 63 62 57 198 255 @T,.tT,ttTtt,ttttttt,,t.tTttttttttttttttt,ttttt.t.ttttTt.tt.t.tTttttTttttt,ttttttt,ttttttttt,tttt,,t point 0 SNP none {haw21398} 633 CB6648_redo II 2897887 1 T G 60 7.12 63 62 57 185 242 @ggggggGg.gg.g.gGggggGggggg,ggggggg,ggggggggg,gggg,,gggggggg.ggggg,,gggG.ggggg,ggggggg,,ggggggggg,gg point 0 nongenic,nongenic -3492 upstream,1154 into {Y110A2AL.14.1},{Y110A2AM.3} 634 CB6648_redo II 2898896 1 T A 123 1.69 63 62 62 77 139 @,,,,a,,,,,,,,,.aa,A.a,,aaaA,a.,,,,aaaa,,a,,a,,aa,A,,aaaA,aa,,,aaaaaaaa,a,,aa,AaAa,aaaaa,aaaaaa,aaaa point 0 nongenic,nongenic -4501 upstream,1450 into {Y110A2AL.14.1},{Y110A2AM.3} 635 CB6648_redo II 2900766 1 A T 201 1.00 63 62 0 6 6 @tTTTtt point 0 three_prime_UTR none {Y110A2AM.4} 160794 CB6648_redo II 2900776 82 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 226 to 308 bp into {Y110A2AM.4} 637 CB6648_redo II 2900872 1 C A 255 1.00 63 62 0 25 25 @AAAAaAaaAAAAaaAaAAAAaAaAa point 0 three_prime_UTR none {Y110A2AM.4} 638 CB6648_redo II 2900873 1 G T 255 1.00 63 62 0 26 26 @TTTTtTttTTTTttTtTTTTtTtTtt point 0 three_prime_UTR none {Y110A2AM.4} 640 CB6648_redo II 2912494 1 A T 154 2.56 63 62 0 12 12 @TTTttTtTTTtt point 0 nongenic,nongenic -8495 upstream,1079 into {Y110A2AM.1},{Y110A2AR.2} 646 CB6648_redo II 3219429 1 G T 18 1.00 63 48 3 3 6 @ttt,,, point 0 nongenic 443 downstream {ZC239.2} 4055 CB6648_redo II 3241681 0 X X -1000 -999.99 -1000 -1000 5 1 6 @.....GgGgg indel 0 three_prime_UTR none {C17F4.3} 649 CB6648_redo II 3278964 1 T A 255 1.00 63 62 0 37 37 @aAAaaaAaAAAAaaaaaAAaAAAAaaaAAAAAAAAaA point 0 SNP none {haw22209} 658 CB6648_redo II 3532191 1 G C 255 4.00 63 62 0 33 33 @cCcccccCcccCcCCCCCCCCCCCCCCCCCCCC point 0 nongenic,nongenic,nongenic -3680 upstream,404 downstream,692 downstream {W09G10.3},{W09G10.4a},{W09G10.4b} 660 CB6648_redo II 3650567 1 C A 255 1.00 63 62 0 52 52 @AaAAAaAaaAAAaAAaaaAAaaAAAaAaaAaAaAaAaaaAAaaaaAaaAAAA point 0 nongenic -682 upstream {F19B10.11} 661 CB6648_redo II 3796556 1 C T 108 2.00 63 62 40 215 255 @,..g,gGgtTttgTtt,,.gtgggtTTg.g,gg.tg,..,ggTT,Ttt,tgTttTtttgt,TTtttgT,tGTTTgtttgTTTGT,T,TGTGTGTg.TT, point 0 silent ACC->ACT[Thr->Thr] {Y8A9A.2} 4059 CB6648_redo II 3796666 0 X X -1000 -999.99 -1000 -1000 14 18 32 @,,,,......,...gGGGGGGGGGGGggg indel 0 inframe none {Y8A9A.2} 664 CB6648_redo II 3797014 1 T C 35 3.00 45 36 1 6 7 @cccccc, point 0 missense CTG->CCG[Leu->Pro] {Y8A9A.2} 665 CB6648_redo II 3797059 1 C T 38 4.38 37 62 16 56 72 @TtttTTTtttTtttTtt.Tt.tttt..t.,,ttTtT,T,t..tttttt,tt,.t,ttttTgTTTgTtTTt,g point 0 missense CCG->CTG[Pro->Leu] {Y8A9A.2} 667 CB6648_redo II 3797266 1 T A 87 4.12 63 62 29 79 108 @aa,Aaaaa,AAaaAA,A,A,,a,,,AAAAA,aA,A,A.,,A,...aaaAAAaa.aAaaAAAAA,aa,AAAAA....AAAAaa.aAAAAaa,AAAAAA,A point 0 missense CTG->CAG[Leu->Gln] {Y8A9A.2} 668 CB6648_redo II 3797353 1 A T 255 3.75 63 62 28 78 106 @T.tt.T,..TTtTTTTTt.T.t.,TTTTT.T.TTTT.t.T.TT..T.Ttt.tTTtTTtttttTTTt,tttttTTTtttTttTttttTtTT...tTt..t point 0 missense CAT->CTT[His->Leu] {Y8A9A.2} 669 CB6648_redo II 4142478 1 C G 255 1.00 63 62 0 19 19 @GGgGGggGGGGGGGgGGgG point 0 nongenic -331 upstream {F56D3.1.2} 670 CB6648_redo II 4142481 1 G A 255 1.00 63 62 0 24 24 @AaAAaaAAAAAAAaAAaAaAAAAa point 0 nongenic -328 upstream {F56D3.1.2} 671 CB6648_redo II 4142501 1 A T 255 1.00 63 62 0 29 29 @tTTTTtTtTtttTttttTTTTTttTTTTT point 0 nongenic -308 upstream {F56D3.1.2} 672 CB6648_redo II 4260994 1 T C 3 8.06 0 2 6 33 39 @.cccccccccccccccccccccc,cccccc.,,cc,ccc point 0 nongenic,nongenic -15212 upstream,-2218 upstream {C01F1.4},{C16A11.8} 4061 CB6648_redo II 4273307 0 X X -1000 -999.99 -1000 -1000 3 -2 1 @,,,CCc indel 0 nongenic,nongenic -14531 upstream,-2900 upstream {C16A11.8},{C01F1.4} 673 CB6648_redo II 4296769 1 C G 65 1.00 63 10 1 5 6 @GGgGg. point 0 nongenic,nongenic,nongenic -1534 upstream,-8565 upstream,1676 into {C01F1.3b},{C01F1.6},{C01F1.3a} 674 CB6648_redo II 4296770 1 A C 10 1.00 63 62 2 2 4 @Cc.. point 0 nongenic,nongenic,nongenic -1533 upstream,-8566 upstream,1677 into {C01F1.3b},{C01F1.6},{C01F1.3a} 681 CB6648_redo II 4375086 1 A C 76 1.00 63 46 1 4 5 @cCCc. point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -3743 upstream,-392 upstream,-68 upstream,1367 into,1636 into,1651 into,621 into {B0286.1},{B0286.4c.2,B0286.4c.5},{B0286.4b},{B0286.4a.2,B0286.4c.6,B0286.4c.7,B0286.4c.8,B0286.4d},{B0286.4a.1},{B0286.4c.3,B0286.4c.4},{B0286.4c.1} 682 CB6648_redo II 4375087 1 T A 46 1.00 63 62 2 4 6 @aAAa.. point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -3742 upstream,-393 upstream,-69 upstream,1366 into,1635 into,1650 into,620 into {B0286.1},{B0286.4c.2,B0286.4c.5},{B0286.4b},{B0286.4a.2,B0286.4c.6,B0286.4c.7,B0286.4c.8,B0286.4d},{B0286.4a.1},{B0286.4c.3,B0286.4c.4},{B0286.4c.1} 685 CB6648_redo II 4468036 1 G T 255 1.00 63 62 0 26 26 @TtTTTTtTTTTTtTttTTTtttTtTt point 0 SNP none {haw24704} 686 CB6648_redo II 4468046 1 G T 255 1.00 63 62 0 25 25 @TTTTTtTttTTTtttTtTtTTTTTT point 0 nongenic,nongenic -114 upstream,159 downstream {W06B4.2},{W06B4.3} 687 CB6648_redo II 4492564 1 T A 15 1.00 63 62 3 4 7 @AAAa,,, point 0 SNP none {haw24745} 688 CB6648_redo II 4499374 1 G C 255 1.00 63 62 0 24 24 @CCcCcCCcCCCCCCCcCcCccccc point 0 SNP none {haw24761} 691 CB6648_redo II 4642240 1 C T 105 4.69 32 4 0 11 11 @tTTTTtTttTt point 0 nongenic,nongenic -3910 upstream,-6841 upstream {F35D11.11a,F35D11.11b,F35D11.11c},{Y74E4A.1b} 711 CB6648_redo II 4929759 1 C A 255 1.44 63 62 1 35 36 @aaaAaaaAAAAAaaaAAaaAAAaAaAAaAA.AAaAA point 0 SNP none {haw25053} 712 CB6648_redo II 4964576 1 C A 255 1.00 63 62 0 26 26 @AaaaaAaaAaaAAAAaaAAaaaaaaA point 0 SNP none {haw25061} 713 CB6648_redo II 5021686 1 T G 30 1.00 63 62 4 5 9 @,.,,ggGGg point 0 nongenic -1061 upstream {F59A6.1} 4076 CB6648_redo II 5028912 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @.,,,gggG indel 0 nongenic -1056 downstream {F59A6.1} 716 CB6648_redo II 5078770 1 C G 31 1.00 63 0 0 4 4 @gggg point 0 three_prime_UTR none {C27A2.6} 718 CB6648_redo II 5079263 1 G C 65 1.00 63 14 1 8 9 @,cccCCccc point 0 silent GGC->GGG[Gly->Gly] {C27A2.6} 721 CB6648_redo II 5136070 1 G C 28 1.00 63 32 2 6 8 @ccCCCC,, point 0 nongenic -785 upstream {F58A6.2} 724 CB6648_redo II 5185654 1 G C 255 1.00 63 62 0 35 35 @CcCcCcccccCCCcCCCCCCccCCCcCCcCCCCCc point 0 missense,SNP CCT->CGT[Pro->Arg],none {C27D6.4c},{haw25156,uCE2-1607} 725 CB6648_redo II 5203315 1 A G 43 1.00 63 14 1 3 4 @.GGG point 0 five_prime_UTR none {C34F11.3a.1,C34F11.3a.2} 727 CB6648_redo II 5222112 1 G T 47 1.00 63 54 1 3 4 @,ttT point 0 nongenic,nongenic,nongenic,nongenic -2229 upstream,-7946 upstream,3236 into,3241 into {C34F11.9b},{EGAP2.2},{C34F11.9c},{C34F11.9a} 728 CB6648_redo II 5222113 1 T C 54 1.00 63 46 1 4 5 @,ccCc point 0 nongenic,nongenic,nongenic,nongenic -2230 upstream,-7945 upstream,3235 into,3240 into {C34F11.9b},{EGAP2.2},{C34F11.9c},{C34F11.9a} 729 CB6648_redo II 5231204 1 T G 124 1.00 63 62 0 6 6 @Gggggg point 0 SNP none {haw25212} 731 CB6648_redo II 5231227 1 T G 223 1.00 63 62 0 8 8 @gGgGgggG point 0 nongenic,nongenic -174 upstream,747 downstream {EGAP2.1},{EGAP2.2} 732 CB6648_redo II 5231250 1 A C 252 1.00 63 62 0 11 11 @CcCcccCcccc point 0 nongenic,nongenic -151 upstream,770 downstream {EGAP2.1},{EGAP2.2} 750 CB6648_redo II 5322089 1 T A 255 1.00 63 62 0 20 20 @aAAAAAaaAaAAAAAaAAAA point 0 nongenic -890 upstream {F08B1.1a.3,F08B1.1c.1} 751 CB6648_redo II 5571578 1 G C 255 1.00 63 62 0 39 39 @CcCcccCccCCcCccccccCCCcCcCCcCCcCccCCCCc point 0 missense,three_prime_UTR GAC->CAC[Asp->His],none {C17C3.15},{C17C3.1c} 754 CB6648_redo II 5635095 1 C G 255 1.00 63 62 0 30 30 @gGGGggGGGggGggGGGggggggggGgGGg point 0 missense,SNP GAA->CAA[Glu->Gln],none {F59E12.8},{haw25459} 755 CB6648_redo II 5647429 1 C T 255 1.00 63 62 0 41 41 @TtTtTttttTttTtTtTTtTtTTttTtTTTTtTtTTTTttt point 0 silent,SNP AAG->AAA[Lys->Lys],none {F59E12.10},{haw25466} 757 CB6648_redo II 5667682 1 A G 31 1.00 63 62 2 4 6 @,,GGGG point 0 missense TTT->CTT[Phe->Leu] {C25H3.7a} 758 CB6648_redo II 5723522 1 G T 105 1.00 63 62 1 5 6 @,TTTTT point 0 nongenic,nongenic 1178 into,1791 into {C18A3.6b.1},{C18A3.6a,C18A3.6b.2} 759 CB6648_redo II 5775940 1 C T 44 1.00 63 62 3 6 9 @TTTtTt.., point 0 nongenic -6975 upstream {K05F1.6a} 760 CB6648_redo II 5820841 1 G T 16 1.00 63 52 0 6 6 @tTttCC point 0 five_prime_UTR none {ZK1248.3a,ZK1248.3b} 761 CB6648_redo II 5846225 1 G T 122 1.00 63 62 3 8 11 @.,.TTTtttTT point 0 nongenic,nongenic -376 upstream,-715 upstream {H41C03.3.1},{ZK1248.17} 762 CB6648_redo II 5861709 1 G A 103 1.00 63 62 2 7 9 @,,Aaaaaaa point 0 nongenic,nongenic -2452 upstream,-3317 upstream {F55C12.7.1,F55C12.7.2,F55C12.7.3},{F55C12.4} 4097 CB6648_redo II 5931438 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @,,,.,.cc indel 0 nongenic -2020 upstream {F28B12.2a} 766 CB6648_redo II 5931439 1 T C 3 1.00 63 28 3 4 7 @CcCc... point 0 nongenic -2018 upstream {F28B12.2a} 768 CB6648_redo II 5960458 1 C T 255 1.00 63 62 0 38 38 @tTttttttttTtTtttttttTtttTTtttttTtTttTT point 0 SNP none {haw25654} 772 CB6648_redo II 6068938 1 A T 3 3.50 0 18 18 26 44 @.....,,.TTTTtTTtT.tTttTTTTT,tTtTtTTT......,. point 0 nongenic -1840 upstream {H12I13.2} 4104 CB6648_redo II 6084904 1 X X -1000 -999.99 -1000 -1000 5 -3 2 @,.,.. indel -1 frameshift,SNP none,none {F21H12.4},{uCE2-1655} 782 CB6648_redo II 6296757 1 C T 14 1.81 63 62 34 51 85 @.,..,.,,...TT,Tt,TTTtTT,T,,tTTtT,TT,TTT,TTT,TTTtTTt,TtTT,T,T.,,T,,Tt,T,tT.TTTTt,,Tt,T point 0 nongenic,nongenic -2653 upstream,437 downstream {C29F5.4a,C29F5.4b},{C29F5.5} 783 CB6648_redo II 6296828 1 A C 49 2.50 63 48 17 50 67 @CCc.cCCCcCCccCccccCcccccC,ccCCccCccCcCccCc,cCCcccc,CC.c..,,.,,.,,., point 0 nongenic,nongenic -2724 upstream,366 downstream {C29F5.4a,C29F5.4b},{C29F5.5} 785 CB6648_redo II 6451387 1 A T 255 1.00 63 62 0 40 40 @TttTTttTtTttTttTtTtttttttTTTTttttTtTTttt point 0 SNP none {haw25895} 4110 CB6648_redo II 6500690 0 X X -1000 -999.99 -1000 -1000 3 -2 1 @..,tTtt indel 1 frameshift none {R05G9.3} 787 CB6648_redo II 6522778 1 A C 86 1.00 63 52 1 4 5 @.cccc point 0 nongenic,nongenic -2098 upstream,-2982 upstream {C56E6.2},{C56E6.3a} 788 CB6648_redo II 6527423 1 G A 255 1.00 63 62 0 34 34 @AAAAAaaAaAAAaAAAAaaAAAaAAAaAAAAaaA point 0 silent,SNP ATC->ATT[Ile->Ile],none {C56E6.4},{haw25905} 789 CB6648_redo II 6527424 1 A T 255 1.00 63 62 0 34 34 @TTTTttTtTTTtTTTTttTTTtTTTtTTTTttTt point 0 missense,SNP ATC->AAC[Ile->Asn],none {C56E6.4},{haw25906} 4113 CB6648_redo II 6539462 1 X X -1000 -999.99 -1000 -1000 9 -7 2 @,..,,.,,. indel -1 SNP none {snp_C56E6[1]} 4116 CB6648_redo II 6561615 3 X X -1000 -999.99 -1000 -1000 8 -6 2 @,....,.. indel -3 SNP none {uCE2-1672} 4118 CB6648_redo II 6620906 0 X X -1000 -999.99 -1000 -1000 4 0 4 @....ggGg indel 0 nongenic,nongenic,nongenic,nongenic -11600 upstream,-1194 downstream,-1231 upstream,-965 downstream {C56C10.12},{F54H5.4b},{F54H5.3},{F54H5.4a} 791 CB6648_redo II 6630609 1 T C 255 1.00 63 62 15 57 72 @Ccc..CCCCC..C.c.CC.cCcCCc.cCCCCCCCCCCCC.Ccc.cCcCCccCCCc..c.ccCccCCccC.C. point 0 nongenic,nongenic -492 upstream,-536 upstream {T19D12.4a},{T19D12.4b} 792 CB6648_redo II 6640325 1 C G 27 1.00 63 62 1 3 4 @gGG. point 0 nongenic 2740 into {T19D12.6} 796 CB6648_redo II 6669138 1 G C 201 1.00 63 62 1 13 14 @ccccccccccccc, point 0 silent TCG->TCC[Ser->Ser] {T19D12.1} 797 CB6648_redo II 6713192 1 G T 91 1.00 63 40 1 6 7 @,tTTTTt point 0 nongenic,nongenic -1043 upstream,-313 upstream {T14B4.6},{T14B4.7b.1} 798 CB6648_redo II 6713193 1 T G 133 1.00 63 62 0 7 7 @gGGGGgg point 0 nongenic,nongenic -1042 upstream,-314 upstream {T14B4.6},{T14B4.7b.1} 802 CB6648_redo II 6718362 1 C G 99 1.00 63 0 0 6 6 @ggGGGg point 0 nongenic,nongenic,nongenic -115 upstream,-141 upstream,656 downstream {T14B4.4a.1},{T14B4.4a.2,T14B4.4b.2},{T14B4.5} 804 CB6648_redo II 6721755 1 A C 135 6.31 63 60 0 6 6 @CcCCcc point 0 ncRNA none {T14B4.t1} 805 CB6648_redo II 6721756 1 G C 152 5.69 63 62 0 6 6 @cCCccC point 0 ncRNA none {T14B4.t1} 4123 CB6648_redo II 6724147 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @,,,,cc indel 0 nongenic -2583 upstream {T14B4.8} 806 CB6648_redo II 6724148 1 A C 60 1.00 63 62 2 3 5 @CCC.. point 0 nongenic -2584 upstream {T14B4.8} 807 CB6648_redo II 6725103 1 C G 19 1.00 63 62 1 4 5 @GGgG, point 0 nongenic -3539 upstream {T14B4.8} 808 CB6648_redo II 6727391 1 T G 68 1.00 63 62 2 4 6 @gGgg., point 0 SNP none {haw25948} 160802 CB6648_redo II 6730769 71 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2884 to 2955 bp into {T14B4.9} 810 CB6648_redo II 6734010 1 C T 157 1.00 63 62 0 6 6 @tTTTTt point 0 nongenic,nongenic -286 upstream,-836 upstream {T14B4.9},{T14B4.3} 813 CB6648_redo II 6736304 1 C G 255 1.00 63 62 0 42 42 @GGggggGGGGGggGgGggGgGgGgGgggGggGgGgggggGGg point 0 missense,SNP TCC->TGC[Ser->Cys],none {T14B4.2},{haw25953} 814 CB6648_redo II 6736306 1 T C 255 1.00 63 62 0 42 42 @ccccCCCCCccCcCcgCcCcCcCcccCccCcCcccccCCccc point 0 missense,SNP TTC->CTC[Phe->Leu],none {T14B4.2},{haw25954} 815 CB6648_redo II 6736474 1 A C 131 1.00 63 62 0 6 6 @CcCCCc point 0 missense AAC->CAC[Asn->His] {T14B4.2} 816 CB6648_redo II 6736476 1 C A 87 1.00 63 62 0 5 5 @aAAAa point 0 missense AAC->AAA[Asn->Lys] {T14B4.2} 817 CB6648_redo II 6736477 1 A C 94 1.00 63 62 0 4 4 @CCCc point 0 missense AAG->CAG[Lys->Gln] {T14B4.2} 823 CB6648_redo II 6745225 1 A C 47 1.00 63 50 2 3 5 @cCc.. point 0 nongenic,nongenic -554 upstream,194 downstream {F41G3.17},{F41G3.16} 824 CB6648_redo II 6745251 1 A C 255 1.00 63 62 0 17 17 @ccCCCCCCcCCCCCCcc point 0 nongenic,nongenic -580 upstream,168 downstream {F41G3.17},{F41G3.16} 827 CB6648_redo II 6755908 1 A T 255 1.00 63 62 0 40 40 @TtTttTTtttTttTTtTTtTtTTtttttTTtttttTTTTt point 0 SNP none {haw25965} 828 CB6648_redo II 6759799 1 A T 112 1.00 63 62 6 12 18 @tTttttTTTTt,T..... point 0 nongenic,nongenic,nongenic 569 into,823 downstream,937 downstream {F41G3.2},{F41G3.12},{F41G3.3} 829 CB6648_redo II 6759908 1 C T 189 1.00 63 62 0 7 7 @TTttttT point 0 missense CCC->TCC[Pro->Ser] {F41G3.2} 830 CB6648_redo II 6759912 1 A G 110 1.00 63 0 0 4 4 @gggG point 0 missense CAA->CGA[Gln->Arg] {F41G3.2} 831 CB6648_redo II 6759919 1 A G 114 1.00 63 0 0 4 4 @GGgg point 0 silent GAA->GAG[Glu->Glu] {F41G3.2} 832 CB6648_redo II 6759922 1 C T 148 1.00 63 62 0 6 6 @TTttTt point 0 silent ACC->ACT[Thr->Thr] {F41G3.2} 833 CB6648_redo II 6762603 1 C T 255 1.00 63 62 0 29 29 @TtTTTTtttttTttttTTTtttTttTttt point 0 SNP none {haw25977} 834 CB6648_redo II 6764076 1 C A 111 1.00 63 10 0 5 5 @AaAAA point 0 nongenic,nongenic,nongenic -903 upstream,-941 upstream,3454 into {F41G3.1.1},{F41G3.1.2},{F41G3.12} 835 CB6648_redo II 6764077 1 A C 116 1.00 63 10 0 5 5 @CcCCC point 0 nongenic,nongenic,nongenic -902 upstream,-940 upstream,3455 into {F41G3.1.1},{F41G3.1.2},{F41G3.12} 838 CB6648_redo II 6766065 1 C T 255 1.00 63 62 0 40 40 @tTttTtTTtTttTtTTtTttTTTtTTTtTTTTtTtTtTtT point 0 SNP none {haw25988} 839 CB6648_redo II 6766211 1 C T 255 1.00 63 62 0 27 27 @TTTTTTtTtTTttTtTTTTTTtTtTTT point 0 SNP none {haw25989} 840 CB6648_redo II 6808829 1 A G 255 1.00 63 62 0 24 24 @GggggGgggGGggggGGggGgggG point 0 SNP none {haw26048} 841 CB6648_redo II 6818451 1 A G 40 1.00 63 62 5 7 12 @.,,,,GgGGgGg point 0 nongenic -9605 upstream {F31E8.1} 842 CB6648_redo II 6878056 1 C T 255 1.00 63 62 0 11 11 @TTTTtTTtTTt point 0 SNP none {haw26160} 843 CB6648_redo II 6896314 1 T A 255 1.00 63 62 0 50 50 @aaaaaAaaAaaAAAAAAAaAaaaaaAAAaaaaAAAAaAAAAaaAAAAAaa point 0 SNP none {haw26186} 844 CB6648_redo II 6908985 1 C T 255 1.00 63 62 0 52 52 @TTTttTtttTTtttTTTtTTTtttttttttTTttttttTtTTtTtttTtTTT point 0 SNP none {haw26205} 845 CB6648_redo II 6942564 1 T G 35 1.00 63 0 0 4 4 @GGGg point 0 nongenic,nongenic,nongenic,nongenic -1677 upstream,-3757 upstream,4321 into,5260 into {F22D3.2c},{F22D3.5},{F22D3.2b},{F22D3.2a} 846 CB6648_redo II 6942566 1 C T 158 1.00 63 0 0 6 6 @TTTtTt point 0 nongenic,nongenic,nongenic,nongenic -1675 upstream,-3759 upstream,4319 into,5258 into {F22D3.2c},{F22D3.5},{F22D3.2b},{F22D3.2a} 847 CB6648_redo II 6999734 1 C A 255 1.00 63 62 0 21 21 @aAaAAaaAaaAAAAAaaaaAa point 0 SNP none {haw26262} 849 CB6648_redo II 7003347 1 T A 255 1.00 63 62 0 35 35 @AAAAAAaAAAAAAAAAAAAaAAaaAAaAaAAAaAa point 0 missense GTA->GAA[Val->Glu] {C52E12.2a,C52E12.2b} 853 CB6648_redo II 7028439 1 T A 95 1.00 63 0 0 5 5 @aaAaa point 0 nongenic,nongenic,nongenic -9793 upstream,1385 into,1653 into {ZK1127.7},{C52E12.1.2},{C52E12.1.1} 855 CB6648_redo II 7123163 1 T C 171 1.69 63 62 0 6 6 @cccCcc point 0 nongenic,nongenic,nongenic -1432 upstream,-1441 upstream,983 into {F10E7.3},{F10E7.11},{F10E7.2} 857 CB6648_redo II 7141342 1 T A 5 1.31 63 18 1 3 4 @.aaa point 0 nongenic -3216 upstream {T07F8.2} 860 CB6648_redo II 7398345 1 G A 100 1.00 63 62 2 4 6 @,,AaAa point 0 nongenic -605 upstream {C07D10.1} 4139 CB6648_redo II 7403159 0 X X -1000 -999.99 -1000 -1000 4 0 4 @...,Cc indel 1 nongenic,nongenic -513 upstream,-5272 upstream {C07D10.4},{K02A2.2} 861 CB6648_redo II 7403160 1 C A 52 1.00 63 62 0 7 7 @aaaAAaa point 0 nongenic,nongenic -514 upstream,-5270 upstream {C07D10.4},{K02A2.2} 862 CB6648_redo II 7422323 1 T C 10 1.00 63 22 3 3 6 @Ccc.,, point 0 nongenic -10353 upstream {K02A2.5} 864 CB6648_redo II 7444114 1 A C 48 1.62 63 20 3 4 7 @,,,CCcc point 0 nongenic -2495 upstream {Y9D1A.1} 867 CB6648_redo II 7486763 1 G C 86 1.19 63 62 1 6 7 @.cccCcc point 0 nongenic -3718 upstream {D1022.8} 868 CB6648_redo II 7584472 1 C A 8 4.94 63 62 7 11 18 @,,,....aaaAAAAAAaa point 0 nongenic -983 upstream {F35D2.4} 872 CB6648_redo II 7625205 1 G T 11 1.00 63 24 4 5 9 @..,,TTTtt point 0 nongenic -4759 upstream {R07G3.8} 873 CB6648_redo II 7625206 1 T G 25 1.00 63 10 3 7 10 @..,CGGGggg point 0 nongenic -4760 upstream {R07G3.8} 874 CB6648_redo II 7634326 1 T G 153 1.00 63 26 1 6 7 @.gGgGgg point 0 nongenic,nongenic,nongenic -163 upstream,6332 into,7144 into {R153.1a},{R153.1b,R153.1c,R153.1d,R153.1e},{R153.1g} 875 CB6648_redo II 7642038 1 C G 57 1.00 63 36 0 4 4 @ggGg point 0 five_prime_UTR none {R153.1d,R153.1f} 879 CB6648_redo II 7642076 1 G T 35 1.00 63 0 0 4 4 @tTTT point 0 five_prime_UTR none {R153.1d,R153.1f} 882 CB6648_redo II 7696463 1 T A 53 1.00 63 52 5 8 13 @.,.,,AaAAAaAa point 0 nongenic,nongenic,nongenic -2579 upstream,529 into,594 into {B0495.4},{B0495.5.2},{B0495.5.1} 883 CB6648_redo II 7697395 1 A C 64 0.00 63 56 0 4 4 @cccC point 0 missense TCC->GCC[Ser->Ala] {B0495.5.1,B0495.5.2} 884 CB6648_redo II 7697396 1 T A 57 0.00 63 60 0 5 5 @aaaAA point 0 silent GGA->GGT[Gly->Gly] {B0495.5.1,B0495.5.2} 885 CB6648_redo II 7697397 1 C T 68 1.00 63 56 0 5 5 @ttTTT point 0 missense GGA->GAA[Gly->Glu] {B0495.5.1,B0495.5.2} 886 CB6648_redo II 7698554 1 A T 35 1.00 63 22 0 4 4 @tttt point 0 SNP none {haw26816} 889 CB6648_redo II 7698791 1 T G 52 1.00 63 62 3 6 9 @.,.gggGGg point 0 nongenic,nongenic,nongenic,nongenic -359 upstream,-371 upstream,-386 upstream,167 into {B0495.5.1},{B0495.5.2},{B0495.2},{B0495.6} 160803 CB6648_redo II 7743768 96 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered non-exonic, 1446 to 1542 bp into,non-exonic, 18941 to 19037 bp into {B0228.4e},{B0228.4a,B0228.4c} 4157 CB6648_redo II 7745769 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @,,,TTT indel 0 nongenic,nongenic,nongenic -3447 downstream,-6589 downstream,-6876 downstream {B0228.4e},{B0228.4a},{B0228.4c} 894 CB6648_redo II 7754509 1 C A 122 1.00 63 60 3 8 11 @AaAaaaaa.,. point 0 missense TTG->TTT[Leu->Phe] {B0228.6} 4159 CB6648_redo II 7803627 0 X X -1000 -999.99 -1000 -1000 2 1 3 @.,cCc indel 0 nongenic,nongenic -7544 upstream,-9377 upstream {T05A6.1},{C06A8.9} 898 CB6648_redo II 7809946 1 T C 102 1.00 63 50 1 4 5 @CccC. point 0 SNP none {haw26900} 899 CB6648_redo II 7866905 1 C A 4 1.00 63 62 3 6 9 @,..AaAAaa point 0 missense AGG->ATG[Arg->Met] {T09A5.12.1,T09A5.12.2} 900 CB6648_redo II 7871212 1 G A 57 1.00 63 62 1 3 4 @.AaA point 0 missense CCT->CTT[Pro->Leu] {T01H3.3.1,T01H3.3.2} 901 CB6648_redo II 7883746 1 C G 233 1.44 63 62 0 15 15 @GGgGGGGgGgGGGGg point 0 nongenic -9413 upstream {ZK675.1.1,ZK675.1.2} 902 CB6648_redo II 7913323 1 C A 255 1.00 63 62 0 39 39 @aAaAAaAaaAAAAaaAAAAAAaaaaaAAaAaaaaAaaaA point 0 SNP none {haw26997} 903 CB6648_redo II 7960769 1 C G 255 1.00 63 62 0 49 49 @GgGGGggGggGGGGGgGggggggGgGGGggGgggGggGggGGgGGgggg point 0 SNP none {haw27047} 904 CB6648_redo II 8033056 1 C G 110 1.00 63 62 3 10 13 @ggGGgGGgGg,.. point 0 nongenic -416 upstream {C08B11.4} 905 CB6648_redo II 8033057 1 A C 92 1.00 63 62 3 8 11 @CCcCCcCc,.. point 0 nongenic -417 upstream {C08B11.4} 909 CB6648_redo II 8049770 1 T A 45 1.00 63 18 0 5 5 @aaAaa point 0 nongenic,nongenic,nongenic -3296 upstream,724 into,734 downstream {T05H10.4a,T05H10.4b.2},{T05H10.3},{T05H10.2} 910 CB6648_redo II 8227927 1 G C 255 1.00 63 62 0 36 36 @CcCCcCCCCCccCCCCCCCcCcCCCcCcccccccCc point 0 missense CGC->CCC[Arg->Pro] {M110.5a.1,M110.5a.2,M110.5b,M110.5c,M110.5d} 911 CB6648_redo II 8227928 1 C G 255 1.00 63 62 0 37 37 @GgGGgGGGGGggGGGGGGGgGgGGGgGgggggggGgg point 0 silent CGC->CGG[Arg->Arg] {M110.5a.1,M110.5a.2,M110.5b,M110.5c,M110.5d} 914 CB6648_redo II 8262986 1 T C 195 5.38 63 62 0 9 9 @CCCCCccCC point 0 nongenic,nongenic -1606 upstream,-3923 upstream {K01C8.1.1},{F35C11.6} 919 CB6648_redo II 8584093 1 C T 255 1.00 63 62 0 34 34 @tttTtTtTtTttTtttttTTttTTtTTTttTTtt point 0 missense,SNP GGA->GAA[Gly->Glu],none {F54C9.11},{haw27317} 920 CB6648_redo II 8622310 1 C A 119 1.00 63 62 3 9 12 @AaAaAAaaa.,. point 0 nongenic,nongenic -404 upstream,176 downstream {T22C8.3},{T22C8.4} 924 CB6648_redo II 8715377 1 C T 255 1.00 63 62 0 43 43 @TTTttTtTTTttTttttTttttTttttTttTTTTtTTtttTTt point 0 SNP none {haw27384} 4169 CB6648_redo II 8798261 0 X X -1000 -999.99 -1000 -1000 2 0 2 @.,Ggg indel 0 nongenic,nongenic -2756 upstream,-4179 upstream {F07H5.8},{F07H5.7} 930 CB6648_redo II 8802488 1 T G 255 1.00 63 62 0 57 57 @GgGgGGGGgggggGggggGGggGGGGggGgggggggGGGgGGgGGGGggggGggggg point 0 silent,SNP TCT->TCG[Ser->Ser],none {F07H5.8},{haw27428} 931 CB6648_redo II 8824743 1 A G 29 2.81 63 62 2 3 5 @,,GGG point 0 nongenic,nongenic -1248 upstream,-3617 upstream {F46C5.3},{F46C5.1} 932 CB6648_redo II 8867479 1 G C 43 1.62 63 62 1 6 7 @,cccCcc point 0 nongenic -2373 upstream {T07D4.1} 933 CB6648_redo II 8894561 1 T C 7 1.00 63 62 1 4 5 @,Cccc point 0 nongenic -2200 upstream {B0457.1a,B0457.1b} 934 CB6648_redo II 8894955 1 C T 255 1.00 63 62 0 32 32 @TTTTtTtTTtttttTtttTTtttTTttTTTTT point 0 SNP none {haw27502} 4174 CB6648_redo II 8896592 1 X X -1000 -999.99 -1000 -1000 12 -5 7 @.,,,..,,.... indel -1 SNP none {uCE2-1805} 935 CB6648_redo II 8907371 1 C T 255 1.00 63 62 0 30 30 @ttTtttttTtTtTTtTtttttttttttTtT point 0 SNP none {haw27506} 936 CB6648_redo II 8916732 1 G A 138 1.00 63 62 0 4 4 @AaAA point 0 nongenic,nongenic -4781 upstream,-5639 upstream {B0457.4},{B0457.6} 939 CB6648_redo II 8916760 1 C T 164 1.00 63 62 0 5 5 @TTtTT point 0 nongenic,nongenic -4809 upstream,-5611 upstream {B0457.4},{B0457.6} 941 CB6648_redo II 9090950 1 G T 6 1.00 63 20 2 2 4 @,.Tt point 0 nongenic 174 downstream {C07H4.1} 942 CB6648_redo II 9092377 1 C T 255 1.00 63 62 0 39 39 @TTTTtTTtttTttTttTTTTTtttTTTtTtTTtTTtTtt point 0 SNP none {haw27664} 943 CB6648_redo II 9181323 1 T G 35 1.00 63 0 0 4 4 @Gggg point 0 nongenic 2889 into {ZK1067.6} 944 CB6648_redo II 9234921 1 T A 44 1.00 63 62 1 3 4 @.aaA point 0 missense AAT->AAA[Asn->Lys] {T26C5.2} 945 CB6648_redo II 9234923 1 C T 198 1.00 63 44 0 6 6 @ttTTTT point 0 missense TCC->TTC[Ser->Phe] {T26C5.2} 946 CB6648_redo II 9322175 1 T C 92 1.00 63 62 4 9 13 @CcCCCCCCc..,. point 0 nongenic,nongenic,nongenic -1708 upstream,184 into,372 downstream {D2013.10},{D2013.1},{D2013.2} 947 CB6648_redo II 9322176 1 C A 71 1.00 63 62 4 7 11 @AAAAAAa..,. point 0 nongenic,nongenic,nongenic -1707 upstream,185 into,373 downstream {D2013.10},{D2013.1},{D2013.2} 948 CB6648_redo II 9331348 1 C T 255 1.00 63 62 0 29 29 @ttttttttttTtTtttttttttttttttt point 0 SNP none {haw27818} 4180 CB6648_redo II 9419090 0 X X -1000 -999.99 -1000 -1000 6 7 13 @,,,,,.ccCcc indel 0 nongenic,nongenic,nongenic -1313 upstream,853 downstream,885 downstream {M176.4},{M176.3.1},{M176.3.2} 952 CB6648_redo II 9426638 1 T A 12 1.00 63 62 4 5 9 @.,,,AaaAa point 0 nongenic,nongenic -541 upstream,413 into {M176.10},{M176.5} 953 CB6648_redo II 9427750 1 T C 32 1.00 63 62 4 7 11 @CCCCCCC.,,. point 0 nongenic -91 upstream {M176.5} 954 CB6648_redo II 9428872 1 G A 255 1.00 63 62 0 30 30 @AAaaAAaaaaaAaaaaaaaaaaAaaAAAAa point 0 SNP none {haw27856} 955 CB6648_redo II 9436563 1 C T 255 1.00 63 62 0 43 43 @ttttTtTTTtTttttTTtTTTTTttTTTTTTTTttTttttTTt point 0 SNP none {haw27860} 956 CB6648_redo II 9437400 1 T G 23 1.00 63 32 1 3 4 @.Ggg point 0 nongenic -1368 upstream {M176.7} 957 CB6648_redo II 9437401 1 G C 33 1.00 63 22 1 5 6 @.CccCC point 0 nongenic -1369 upstream {M176.7} 958 CB6648_redo II 9490848 1 G A 158 1.00 63 10 0 8 8 @ataAaaaA point 0 nongenic -2666 upstream {T19H5.4a} 959 CB6648_redo II 9490850 1 A T 11 1.00 63 62 3 5 8 @TtttT,.. point 0 nongenic -2668 upstream {T19H5.4a} 963 CB6648_redo II 10019098 1 A C 255 4.19 63 62 0 51 51 @CccccCcccccCCCCCcCccCccCCcccCCCCcCcCcCcCccCcCCCCCCc point 0 nongenic -3114 upstream {F52H3.7a} 971 CB6648_redo II 10339269 1 T C 96 7.00 63 62 1 4 5 @.CCCC point 0 nongenic,nongenic 344 downstream,498 downstream {C07E3.2.1},{C07E3.2.2} 972 CB6648_redo II 10340121 1 T G 255 1.00 63 62 0 39 39 @GgGGgGggGGgggggGGGGgGGgggggggggggGggGgg point 0 missense CAT->CCT[His->Pro] {C07E3.2.1,C07E3.2.2} 4192 CB6648_redo II 10430280 1 X X -1000 -999.99 -1000 -1000 3 0 3 @,,. indel -1 SNP none {uCE2-1895} 975 CB6648_redo II 10432291 1 A C 35 1.00 63 62 4 7 11 @..,.CCCcCcc point 0 nongenic,nongenic -10342 upstream,-3774 upstream {E04D5.2},{E04D5.3} 976 CB6648_redo II 10436909 1 A C 255 1.00 63 62 0 34 34 @cCCCccCCcCCcCcCccCCcccCccccCccCCcC point 0 SNP none {haw28333,snp_E04D5[5]} 977 CB6648_redo II 10437067 1 G A 255 1.00 63 62 0 21 21 @AaaaaaaaaaaaaaAAAaAAa point 0 SNP none {haw28334} 978 CB6648_redo II 10473915 1 A G 255 1.00 63 62 0 34 34 @gGgGggGGgGGgGGGgGgGGggGgggGGgGgGgg point 0 SNP none {haw28363} 979 CB6648_redo II 10724355 1 C T 255 1.00 63 62 0 22 22 @TTtTtTtTttTTTtTTTTTtTT point 0 SNP none {haw28599} 980 CB6648_redo II 10779219 1 G T 255 1.00 63 62 0 36 36 @ttTTTttTTTTTTCtttTTTTTTTttTtTttTTTTT point 0 nongenic,nongenic,nongenic,nongenic -4234 upstream,-6153 upstream,355 into,898 into {C52A11.4d},{R06F6.1.1},{T19E10.1a},{T19E10.1b} 981 CB6648_redo II 10779220 1 G A 255 1.00 63 62 1 34 35 @aAAAaaA,AAAAAaaaAAAAAAAaaAaAaaAAAAA point 0 nongenic,nongenic,nongenic,nongenic -4235 upstream,-6152 upstream,356 into,899 into {C52A11.4d},{R06F6.1.1},{T19E10.1a},{T19E10.1b} 982 CB6648_redo II 10827063 1 C T 255 1.00 63 62 0 83 83 @TTTTTtttTtTTtTTTTtTTtTTTTTTTttttTTTTtttTTTTTtTtTtTtTTTtttTTTTTTttTTTtTTTtTtTtttTTTT point 0 SNP none {haw28664,snp_VM106R[1]} 983 CB6648_redo II 10827279 1 A T 50 1.00 63 62 8 12 20 @ttttTtTtTtTt......., point 0 nongenic,nongenic,nongenic -3276 upstream,3062 into,354 downstream {R06F6.12},{M106.1},{VM106R.1} 984 CB6648_redo II 10828430 1 C T 255 1.00 63 62 0 40 40 @tTtttttTtTTTttTTttttTTTTTTttttTTTTttTTtt point 0 SNP none {haw28666} 985 CB6648_redo II 10828577 1 G A 255 1.00 63 62 0 33 33 @aaaaaaAAaaAaAaaaaaAaaaAAAAAAaAaaA point 0 SNP none {haw28667} 986 CB6648_redo II 10829219 1 G A 255 1.00 63 62 0 41 41 @AaaAAaAaaAaaAaaAaaAAAaAAAAAaAAaaaAaAaAaaa point 0 SNP none {haw28668} 987 CB6648_redo II 11031295 1 T A 7 1.00 63 4 1 5 6 @.Aaaaa point 0 nongenic,nongenic -4814 upstream,-967 upstream {F33A8.10},{F33A8.2.1,F33A8.2.2} 988 CB6648_redo II 11092046 1 T C 255 1.00 63 62 0 43 43 @ccCccCCccCCcccCcCCCCcCcccCcCccCCcCCCCcCCccC point 0 nongenic,nongenic -2665 upstream,-626 upstream {F45E10.1a,F45E10.1b,F45E10.1c,F45E10.1d},{C09H10.1} 992 CB6648_redo II 11181038 1 T G 69 1.00 63 62 1 3 4 @,gGg point 0 SNP none {snp_F37H8[3]} 4199 CB6648_redo II 11196929 0 X X -1000 -999.99 -1000 -1000 5 -2 3 @..,,.Gg indel 0 nongenic -6811 upstream {T06D8.1a,T06D8.1b} 4200 CB6648_redo II 11200489 4 X X -1000 -999.99 -1000 -1000 9 -8 1 @.,,..,,.. indel -4 SNP none {snp_F37H8[6]} 4202 CB6648_redo II 11207621 0 X X -1000 -999.99 -1000 -1000 4 1 5 @,.,,aAA indel 0 inframe none {T06D8.1a,T06D8.1b} 998 CB6648_redo II 11212017 1 G T 125 2.44 63 62 15 15 30 @...TT....TTTTT,...,.T.T.TTTtTT point 0 nongenic,nongenic,splice_donor -10211 upstream,8278 into,none {T06D8.3},{T06D8.1a,T06D8.1b},{T06D8.1a,T06D8.1b} 1003 CB6648_redo II 11318254 1 A C 52 1.00 63 62 2 4 6 @CCCC., point 0 nongenic,nongenic -4071 upstream,903 downstream {T24F1.4},{T24F1.5} 1010 CB6648_redo II 11611863 1 G T 114 1.00 63 62 2 8 10 @.,TTTtTttt point 0 nongenic,nongenic -136 upstream,416 downstream {F07A11.5},{F07A11.4} 1011 CB6648_redo II 11611864 1 A G 116 1.00 63 62 2 8 10 @.,GGGgGggg point 0 nongenic,nongenic -135 upstream,417 downstream {F07A11.5},{F07A11.4} 4206 CB6648_redo II 11611946 0 X X -1000 -999.99 -1000 -1000 5 -1 4 @,,,,.TTT indel 0 nongenic,nongenic -54 upstream,499 downstream {F07A11.5},{F07A11.4} 4207 CB6648_redo II 11717737 1 X X -1000 -999.99 -1000 -1000 9 -5 4 @,.,,,,,.. indel -1 SNP none {uCE2-2035} 1012 CB6648_redo II 11717738 1 T G 14 1.00 63 62 4 5 9 @GgGGG,,.. point 0 SNP none {uCE2-2035} 1013 CB6648_redo II 11794523 1 A C 255 1.00 63 62 0 35 35 @CcccCCcCcCCCCCcCCcccccccCccCcCCccCC point 0 nongenic,nongenic -4429 upstream,2641 into {F43G6.11a,F43G6.11b},{F43G6.4} 1015 CB6648_redo II 12036144 1 G C 5 1.00 63 62 7 7 14 @CC,,CAC,,,,C,c point 0 nongenic,nongenic,nongenic -8482 upstream,507 into,594 downstream {Y17G7B.8},{Y17G7B.9},{Y17G7B.7.1} 1016 CB6648_redo II 12115353 1 C T 255 1.00 63 62 0 45 45 @TttttttTtttttTttTttTTtTTtttttttttttTtttTTTTTt point 0 SNP none {haw30080} 1018 CB6648_redo II 12170815 1 G A 255 1.00 63 62 0 43 43 @AAAAaAAAAAAaAAaAAAAaAAAAaAAAAaAAAaAAAAaaAAa point 0 SNP none {haw30197} 1020 CB6648_redo II 12171258 1 C T 7 1.75 63 2 36 36 72 @T....tt..TT.tT,.T,.,t..tTT,,.t,T,,TT.,T,,.tttT,.TtTT,T,t.,,..tT.TtTTttt. point 0 SNP none {haw30199} 1022 CB6648_redo II 12174493 1 G A 255 1.00 63 62 0 19 19 @AAaAaAAAAAaaAAaAAaa point 0 SNP none {haw30201} 1023 CB6648_redo II 12178809 1 C T 255 1.00 63 62 0 31 31 @tTTttTTTttttTTtTTTTTttTTTtttTTT point 0 SNP none {haw30206} 160814 CB6648_redo II 12181904 142 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2742 to 2884 bp into {Y57A10A.13} 1024 CB6648_redo II 12193173 1 G A 255 1.00 63 62 0 24 24 @AaaaaAaAAAAaaaaaAaAAAAAA point 0 nongenic 3382 into {Y57A10A.15} 1025 CB6648_redo II 12260333 1 C T 165 1.00 63 62 0 6 6 @TTTTTT point 0 SNP none {haw30396} 1026 CB6648_redo II 12266285 1 G T 107 1.00 63 62 7 11 18 @,,.,,..ttTttTtTTtT point 0 SNP none {haw30403} 1027 CB6648_redo II 12370055 1 C A 255 1.00 63 62 0 38 38 @AAAAAaAAaaaaaAAAaaaaaaAaAAAaaaAAAAAAAa point 0 SNP none {haw30684} 1028 CB6648_redo II 12387897 1 T A 255 1.00 63 62 0 48 48 @AAAAaaaaAAaAAAaaaaAAAaaaAAaaaaAaaaaaaaaaAaAAaAAa point 0 SNP none {haw30711} 1039 CB6648_redo II 12562077 1 A C 3 1.00 63 62 7 9 16 @CCccCcCCC,....,, point 0 nongenic,nongenic -1903 upstream,-2020 upstream {F49C5.12},{F49C5.6} 1040 CB6648_redo II 12595553 1 C T 255 1.00 63 62 0 26 26 @TTTttTttTTTTtTTTTtTTtTtTtT point 0 SNP none {haw31224} 1041 CB6648_redo II 12601818 1 C T 255 1.00 63 62 0 77 77 @ttTTtttttTTTtTTTtTTTTTttTTtttTTttTtTTtTTTttttTTTTtttttTttTTtTtTtttTTttTTttttt point 0 nongenic,nongenic,nongenic -20836 upstream,-4062 upstream,1776 into {Y38E10A.5},{Y38E10A.7},{Y38E10A.6a,Y38E10A.6b} 4217 CB6648_redo II 12656382 0 X X -1000 -999.99 -1000 -1000 11 -9 2 @,,.,,,.,,,,ccc indel 3 nongenic,nongenic -12368 upstream,-1718 downstream {Y38E10A.21},{Y38E10A.20} 1053 CB6648_redo II 12658929 1 C T 255 1.00 63 62 0 27 27 @tTTtTTTtTTttTTtTTtTTtTtTTTt point 0 SNP none {haw31398} 1054 CB6648_redo II 12659508 1 A G 255 1.00 63 62 0 43 43 @GGGggGGgGGggGgGgGGGGGgGggGGGggGggGgGGggGGGg point 0 nongenic,nongenic -9241 upstream,4241 into {Y38E10A.21},{Y38E10A.20} 1055 CB6648_redo II 12670938 1 A G 255 1.00 63 62 0 44 44 @GGggggGggggGGggggGggGGGggGgGggGGgGGGGggGgGGG point 0 SNP none {haw31411} 1056 CB6648_redo II 12677412 1 T G 255 1.00 63 62 0 18 18 @gGGGgggggGgGgGGGgg point 0 missense AAC->ACC[Asn->Thr] {Y38E10A.23} 1057 CB6648_redo II 12683679 1 A T 255 1.00 63 62 0 64 64 @ttTTttttTTtTTtTTtTTTTttTtTTtTtttTTTTttttTTtTTttTTTTttTTtTtTtTTtT point 0 nongenic,nongenic -10640 upstream,2944 into {Y46G5A.1a,Y46G5A.1b},{Y46G5A.2} 1058 CB6648_redo II 12684543 1 G A 255 1.00 63 62 0 58 58 @aAAAAaaaAAAAAAaAaaaaaaAaaaaaAAAaAaAaaaaaAaAaaaAaaAaaaaAaAa point 0 SNP none {haw31456} 1059 CB6648_redo II 12684928 1 G A 255 1.00 63 62 2 35 37 @aaaaaaaAaaAAAAAAAAaAAaAAAAAAAAA..AAAA point 0 SNP none {haw31457} 1060 CB6648_redo II 12717330 1 T G 87 1.00 63 62 5 9 14 @ggggggggg,,,,, point 0 nongenic,nongenic,nongenic 1717 into,8041 into,8062 into {Y46G5A.1c},{Y46G5A.1b},{Y46G5A.1a} 1061 CB6648_redo II 12749851 1 T C 166 8.44 63 62 611 -356 255 @C,,C.C,,,,C.c,,,C,,,,C,,...,CC,..,,,,,,...,,C,c.CC,CCC,...c...C,CCC,,C,,C....CC,C,,,C.c.C,,,C,,..., point 0 nongenic -11610 upstream {Y46G5A.5} 1062 CB6648_redo II 12764190 1 G C 255 1.00 63 62 0 64 64 @CCcccCcccCcCccCCCCccccccCCccCCCcccccccCcccCCcccccCccCcCccCCCcCcc point 0 SNP none {haw31561} 1063 CB6648_redo II 12764265 1 A T 26 1.00 63 6 4 7 11 @...,ttttTtT point 0 nongenic 2862 into {Y46G5A.10} 1067 CB6648_redo II 12784485 1 T C 255 1.00 63 62 0 21 21 @CcCcccccCcCCCCcCcCCCC point 0 SNP none {haw31598} 1068 CB6648_redo II 12798297 1 T C 7 1.69 63 0 3 4 7 @...CccC point 0 nongenic -1929 upstream {Y46G5A.17.1} 1069 CB6648_redo II 12803501 1 G A 4 1.06 63 62 21 21 42 @..............A..A...A..AAAAAAAAAAAAAAAAAA point 0 nongenic,nongenic,nongenic -1270 upstream,-7133 upstream,1671 into {Y46G5A.19a.2},{Y46G5A.17.1},{Y46G5A.18a,Y46G5A.18b} 1070 CB6648_redo II 12817524 1 A C 92 1.00 63 62 0 4 4 @CcCc point 0 nongenic,nongenic,nongenic -1151 upstream,736 into,776 into {Y46G5A.21},{Y46G5A.22a},{Y46G5A.22b} 1073 CB6648_redo II 12829859 1 C A 255 2.12 63 62 0 20 20 @AAAaAaaAaaAAaaaAAaaA point 0 nongenic,nongenic -756 upstream,-986 upstream {Y46G5A.24},{Y46G5A.23} 1090 CB6648_redo II 12919526 1 C T 255 1.50 63 62 0 44 44 @ttTTTttTtTtTtttTtTTTTtTTtttttttTTTtTttTTtTtt point 0 missense CCA->CTA[Pro->Leu] {F58G1.1} 4226 CB6648_redo II 13023501 1 X X -1000 -999.99 -1000 -1000 8 -4 4 @,,.,.... indel -1 SNP none {uCE2-2163} 1093 CB6648_redo II 13046466 1 G A 255 1.12 63 62 0 21 21 @AaAAaaaAaAAAAAAAAAAAA point 0 missense CCT->CTT[Pro->Leu] {F42G4.7} 1094 CB6648_redo II 13062610 1 T A 255 1.00 63 62 0 35 35 @AaagaaaAAAAaAaaAaAaaAaAaaaAaAAaAAAa point 0 SNP none {haw31867} 1095 CB6648_redo II 13063714 1 A G 96 1.00 63 36 1 7 8 @GGGGggg. point 0 SNP none {snp_F42G4[4]} 1096 CB6648_redo II 13090005 1 T A 255 1.00 63 62 0 39 39 @AaaaaaaaaAAaaaAAaaAaaaaAaAAAAaAaAaAAAaa point 0 missense GAT->GAA[Asp->Glu] {Y81G3A.3} 1097 CB6648_redo II 13092153 1 G C 255 5.31 63 62 0 31 31 @CccCCccCcCCcccccCCcccCCccccccCc point 0 SNP none {snp_Y81G3A[1]} 1098 CB6648_redo II 13092162 1 G T 255 2.12 63 62 0 29 29 @TTttTtTTtttttTTtttTTttttttTtt point 0 SNP none {snp_Y81G3A[2]} 1099 CB6648_redo II 13092217 1 G A 255 1.00 63 62 0 32 32 @aAaaaaaaAaAAAaAaaaaAaaAaaaAAaAaA point 0 SNP none {haw31901,snp_Y81G3A[3]} 1100 CB6648_redo II 13097749 1 C G 201 1.88 63 62 0 17 17 @GGGGGTGGGGGGGGGGG point 0 nongenic,nongenic,nongenic -1202 upstream,407 downstream,435 into {Y81G3A.5b},{F29C12.3},{Y81G3A.5a} 1101 CB6648_redo II 13200383 1 C T 255 1.00 63 62 0 39 39 @TttTtTTTttttTTTTtTtTTttTTttTtTTttTtTTTT point 0 nongenic,nongenic,nongenic -15614 upstream,305 into,996 downstream {F15D4.2.1},{F15D4.1},{W09H1.6a,W09H1.6b} 1102 CB6648_redo II 13239531 1 G C 255 1.00 63 62 0 42 42 @CCCCccCccccCcCCCcCcCCcCccCCCCCcCcCcCcCCCCC point 0 missense GAC->GAG[Asp->Glu] {F15D4.4} 1103 CB6648_redo II 13257257 1 C G 255 1.00 63 62 0 49 49 @GGGGGGGGGgGGGGGGGGGggGGGGGGGgGGGggggGggGGGgGggGgG point 0 nongenic -3145 upstream {Y48C3A.1} 1104 CB6648_redo II 13350116 1 C A 255 1.00 63 62 0 42 42 @aaaAAaaaAAaAAAaaAaaaaAaaAaaaAAAaAaAaaaAAAA point 0 SNP none {haw32310} 1105 CB6648_redo II 13378340 1 G A 255 1.00 63 62 0 35 35 @aAAAAAAAaAAAAAAaaAaAAAAAAaaAAAAAaaA point 0 SNP none {haw32413} 1108 CB6648_redo II 13408374 1 C A 255 1.00 63 62 0 28 28 @AaaaaaAAAAAAaaAAaaAAAaaaAAaA point 0 nongenic,nongenic,nongenic,nongenic -4178 upstream,1162 into,2021 into,2307 into {Y48C3A.18a},{Y48C3A.17b},{Y48C3A.17c},{Y48C3A.17a,Y48C3A.17d} 1109 CB6648_redo II 13434751 1 G T 255 4.00 63 62 0 18 18 @ttttttTtttTTttTttt point 0 nongenic,nongenic 937 into,948 into {Y48E1C.4a},{Y48E1C.4b} 1110 CB6648_redo II 13434786 1 G T 241 6.56 63 62 0 10 10 @ttTttttTtT point 0 nongenic,nongenic 972 into,983 into {Y48E1C.4a},{Y48E1C.4b} 1117 CB6648_redo II 13440583 1 G T 255 1.00 63 62 0 17 17 @tTTTtttTtTtTTtTTT point 0 missense,SNP ACG->AAG[Thr->Lys],none {Y48E1C.3},{haw32539} 1118 CB6648_redo II 13452555 1 A G 255 2.00 63 62 0 56 56 @GGGGggGGgGGGGGgggGGgGGGGgggGGGgGGGggGGgGgGGggGgGGggGGGgg point 0 nongenic,nongenic -5051 upstream,3796 into {E01G4.1},{E01G4.4} 1119 CB6648_redo II 13485389 1 T C 255 1.00 63 62 0 31 31 @ccCCccCcccCCCcCccCCCCCCcccccccc point 0 silent TGT->TGC[Cys->Cys] {E01G4.6} 1120 CB6648_redo II 13528270 1 A G 255 1.00 63 62 0 21 21 @gGGGgGGGGGGGgGgGgGggg point 0 nongenic,nongenic,nongenic 2857 into,2859 into,689 into {Y48E1B.14a.2},{Y48E1B.14a.1},{Y48E1B.14b} 1121 CB6648_redo II 13578367 1 A G 255 1.00 63 62 0 66 66 @GGgGgGgGGGgGGGGGGGgggGggggGGGGGGgGGggGGGGcGGGGgGGgggGGggggggGcGGgg point 0 nongenic,nongenic,nongenic -3397 upstream,-7267 upstream,2535 into {Y48E1B.5},{Y48E1B.8},{Y48E1B.7} 4230 CB6648_redo II 13697890 0 X X -1000 -999.99 -1000 -1000 6 -5 1 @.,,,,, indel 4 nongenic,nongenic,nongenic -1635 downstream,-3200 upstream,-9486 upstream {Y54G9A.3a},{Y48E1A.1a},{Y54G9A.3b} 1125 CB6648_redo II 13697891 1 G C 95 1.00 63 0 0 6 6 @cCCCCC point 0 SNP none {snp_Y54G9A[1]} 1126 CB6648_redo II 13697893 1 G C 41 1.00 63 0 0 5 5 @CCCCC point 0 nongenic,nongenic,nongenic -3203 upstream,-9482 upstream,1639 into {Y48E1A.1a},{Y54G9A.3b},{Y54G9A.3a} 160818 CB6648_redo II 13702235 55 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered 1551 bp upstream to 1496 bp upstream (0 % of 622 codons) {Y54G9A.3a} 1132 CB6648_redo II 13722005 1 C A 255 1.06 63 62 0 28 28 @aAaAAaaAaaaaAAAAAaAaaAaAAAaa point 0 SNP none {haw33062} 1133 CB6648_redo II 13738653 1 T A 30 1.19 63 62 2 3 5 @..AAA point 0 nongenic -3007 upstream {R06B9.6} 1135 CB6648_redo II 13801366 1 C A 255 1.00 63 62 0 35 35 @aaaaaaAaAaAaaAaaaaaaAaaaaaAaaaAAaaa point 0 SNP none {haw33213} 1136 CB6648_redo II 13883905 1 A G 156 1.00 63 62 1 7 8 @.GggGgGg point 0 nongenic,nongenic,nongenic -4657 upstream,1295 into,1296 into {Y51H1A.6a},{Y51H1A.5.2},{Y51H1A.5.1} 1137 CB6648_redo II 13883906 1 G T 203 1.00 63 62 0 8 8 @TttTtTtT point 0 nongenic,nongenic,nongenic -4656 upstream,1296 into,1297 into {Y51H1A.6a},{Y51H1A.5.2},{Y51H1A.5.1} 1142 CB6648_redo II 13962024 1 C T 255 1.00 63 62 0 26 26 @tTTTTTtTtTTtTTTTTtttttTtTt point 0 missense GAT->AAT[Asp->Asn] {W07G1.5a,W07G1.5b} 1144 CB6648_redo II 13985375 1 G T 24 4.75 0 2 0 22 22 @TtTTTTTTTTttTtTTTTTTtt point 0 nongenic -819 upstream {Y39G8B.4} 1152 CB6648_redo II 14171676 1 C T 255 1.00 63 62 0 45 45 @tttttTTttttTTTttTttTTTtTTttttttTtTTtttttttTtt point 0 SNP none {haw33776} 1153 CB6648_redo II 14211019 1 C G 255 1.00 63 62 0 29 29 @gGgGggGgGGGGGgggggGGggggGGGGG point 0 SNP none {haw33827} 1154 CB6648_redo II 14260657 1 A C 255 2.94 63 62 0 16 16 @CCCCCCcCcCcCCccc point 0 nongenic,nongenic -15895 upstream,4405 into {Y54G11A.3},{Y54G11A.1} 1155 CB6648_redo II 14261823 1 G C 223 1.00 63 62 0 8 8 @CccccCCC point 0 SNP none {haw33932} 4233 CB6648_redo II 14267620 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,..GG indel 0 nongenic,nongenic -1436 downstream,-8933 upstream {Y54G11A.1},{Y54G11A.3} 1156 CB6648_redo II 14276713 1 T C 255 1.00 63 62 0 23 23 @cCCCCcccCcCCCcCCccCcCCC point 0 silent,SNP TTG->CTG[Leu->Leu],none {Y54G11A.3},{haw33969} 1157 CB6648_redo II 14279456 1 C A 191 5.69 63 62 0 35 35 @GaaaAAAAAAaaAaAaaAAaAAAAAaaAaaaaaaA point 0 nongenic,nongenic -10400 upstream,2904 into {Y54G11A.1},{Y54G11A.3} 1158 CB6648_redo II 14311576 1 T C 255 1.00 63 62 0 50 50 @CCcCcccCCcccCcCccCcccccCCcccccccCccccCccCcccCccCcc point 0 nongenic,nongenic -6483 upstream,-894 upstream {Y54G11A.14},{Y54G11A.13} 1173 CB6648_redo II 14406898 1 T C 255 1.00 63 62 0 38 38 @CCcCcccCcCcccCccCccCCcCCcCCCCCcCccCCcc point 0 silent,SNP TTT->TTC[Phe->Phe],none {F26H11.2c,F26H11.2d.1,F26H11.2d.2,F26H11.2e,F26H11.2f,F26H11.2g},{snp_F26H11[1]} 1174 CB6648_redo II 14483373 1 G A 255 1.00 63 62 0 28 28 @AaAAaaAaaaaaAaAaaaaaaAaAAaaa point 0 nongenic -3843 upstream {C13B4.1a,C13B4.1b.1,C13B4.1b.2} 1175 CB6648_redo II 14577321 1 C T 255 1.00 63 62 0 52 52 @ttTTTttTTttttttTtTTTtTTttTtTtTTtttTttTtTTTTtTttttttT point 0 silent AAC->AAT[Asn->Asn] {C01G12.13} 4236 CB6648_redo II 14614150 5 X X -1000 -999.99 -1000 -1000 18 -17 1 @,,....,,.,,,,,..,. indel -5 SNP none {snp_F19H8[2]} 1180 CB6648_redo II 14683303 1 C T 255 1.00 63 62 0 39 39 @TttttTtTTTtttTTtTTTTTtTTtTttTtttTTtTTTt point 0 missense GTT->ATT[Val->Ile] {K02B7.4} 1181 CB6648_redo II 14796259 1 G T 255 1.00 63 62 0 41 41 @TTtTtttTTTTTTTTttTTtTTtTtttTtTtttTTTTtTTT point 0 missense,missense,SNP GGG->GTG[Gly->Val],TGG->TGT[Trp->Cys],none {Y54E2A.11b.1,Y54E2A.11b.2},{Y54E2A.11a.1,Y54E2A.11a.2},{uCE2-2369} 1182 CB6648_redo II 14856846 1 G A 255 1.00 63 62 0 38 38 @aaaaaaaAaAaaaaaACaaaAaaAaaaAAAaAaAAaAA point 0 missense GAT->AAT[Asp->Asn] {R05H10.7} 1183 CB6648_redo II 14872831 1 C A 255 1.00 63 62 0 30 30 @aaaAaAaaaaAaaAaaaaAaaaAaaaaaaa point 0 nongenic 2986 into {R05H10.3a,R05H10.3b} 1184 CB6648_redo II 14877004 1 T A 255 1.00 63 62 0 40 40 @aaAaAaaaaAaaaaaaAAaAAAaAaAAaAAaAAAAaaaAa point 0 nongenic,nongenic,nongenic,nongenic -25390 upstream,-57 upstream,5655 into,5937 into {R03C1.3a},{Y53F4A.2},{R05H10.3b},{R05H10.3a} 1186 CB6648_redo II 14993339 1 T C 82 2.94 63 62 32 66 98 @CC,.C,.C.,,C,CC..CCCCCCC,CC.CCcC.c.C...cCCcc.,.CccCCc.ccCCCCCcccCC,Ccc,CC..cCCcccCcc.ccCccC.c.,,.. point 0 nongenic 33 downstream {Y53F4B.7} 1187 CB6648_redo II 14993590 1 G T 61 9.62 63 62 30 36 66 @,.tt...t..t...ttt,.,ttt.,tt,t.ttt,ttt,ttTt.,,..tt...ttt,ttt,,ttttt point 0 nongenic 284 downstream {Y53F4B.7} 1189 CB6648_redo II 15043614 1 C T 255 1.38 63 62 0 24 24 @tTTTTTtttTttttTtTTttTttT point 0 ncRNA none {Y53F4B.45} 1190 CB6648_redo II 15043625 1 C G 255 1.31 63 62 0 22 22 @gGggggGgGGggGggGggGGGg point 0 ncRNA none {Y53F4B.45} 1191 CB6648_redo II 15048466 1 C T 255 1.00 63 62 0 27 27 @TTtTTTTTTTTTTtTTtTTtTttTTTt point 0 nongenic 341 into {Y53F4B.15} 1192 CB6648_redo II 15056156 1 C T 255 1.00 63 62 0 9 9 @TTTtTttTT point 0 nongenic,nongenic -1972 upstream,-535 upstream {Y53F4B.17},{Y53F4B.16} 1193 CB6648_redo II 15073258 1 T A 226 7.44 63 62 0 26 26 @AAAAAAAAAAaAAaAAaAAAAAaAAa point 0 nongenic,nongenic -1689 upstream,-3916 upstream {Y53F4B.18},{Y53F4B.19} 1197 CB6648_redo II 15155490 1 G A 255 1.00 63 62 0 36 36 @aaaaaaaAaAaaaaaaaaaaaaAAaaaaaaAaAaAa point 0 nongenic -2594 upstream {Y53F4B.28} 1198 CB6648_redo II 15165205 1 C T 255 1.00 63 62 0 48 48 @TTTTtTTTTTTtTtTTtttTtttTTttTttTTttTtTTtttTtTTttT point 0 premature_stop TGG->TGA[Trp->stop] {Y53F4B.30} 1202 CB6648_redo III 118298 1 T G 255 1.00 63 62 0 40 40 @GgGGGGGgGGgGGgGGgGgggggGgggGGggggggggGgg point 0 silent GTT->GTG[Val->Val] {C29F9.5} 1203 CB6648_redo III 199134 1 T A 47 1.44 63 62 2 5 7 @,aa,aaA point 0 nongenic 1090 into {F40G9.1} 1204 CB6648_redo III 277155 1 G A 255 1.00 63 62 0 37 37 @AaAAaAAAaAaAAAaAAaaaAAaaaAAaAAaaaaAaa point 0 nongenic,nongenic -6960 upstream,5727 into {Y50D7A.9},{Y50D7A.2} 1212 CB6648_redo III 346575 1 C A 35 9.88 63 62 36 36 72 @,...,,.,...,,....,,.......,....AAAaaAAAaAAaaaA,AA.AAAAaaaaaAAA.AAAa.A,Aa point 0 nongenic,nongenic,nongenic,nongenic,nongenic -3334 upstream,1638 into,1769 into,1791 into,1858 into {Y50D7A.8},{W07B3.2a.2,W07B3.2b,W07B3.2c.2,W07B3.2f},{W07B3.2d},{W07B3.2c.1},{W07B3.2a.1} 1221 CB6648_redo III 467994 1 G A 54 1.00 63 62 8 16 24 @,,aa,aa,aaa,aaaaaa,,aa,a point 0 nongenic,nongenic,nongenic -4276 upstream,-4305 upstream,3130 into {Y55B1BR.6},{F10C5.2.1},{Y55B1BR.4} 1222 CB6648_redo III 480232 1 G C 137 1.00 63 2 1 6 7 @CCccCC, point 0 nongenic 2074 into {F10C5.1} 1223 CB6648_redo III 480234 1 T G 3 1.19 63 62 3 5 8 @GggGG,.. point 0 nongenic 2072 into {F10C5.1} 1232 CB6648_redo III 513526 1 A G 45 1.00 63 4 0 4 4 @ggGg point 0 SNP none {uCE3-597} 1233 CB6648_redo III 543651 1 T G 22 1.00 63 26 3 3 6 @,,,GGg point 0 nongenic,nongenic,nongenic -13863 upstream,-16737 upstream,1588 into {B0353.1b},{T22F7.4},{T22F7.1} 1234 CB6648_redo III 543652 1 G C 27 1.00 63 22 3 3 6 @,,,CCc point 0 nongenic,nongenic,nongenic -13862 upstream,-16738 upstream,1589 into {B0353.1b},{T22F7.4},{T22F7.1} 1235 CB6648_redo III 628763 1 A C 81 9.25 63 50 0 12 12 @CCCCCCCccCCC point 0 nongenic,nongenic -951 upstream,592 into {T19C3.5},{T19C3.6} 1236 CB6648_redo III 661018 1 A G 28 1.00 63 60 3 4 7 @GGGG... point 0 silent AGA->AGG[Arg->Arg] {C09F5.1} 1239 CB6648_redo III 691185 1 C T 255 1.00 63 62 0 41 41 @TTTTttTTTTTTtTTTTTTTTTTTTTtTTTtTTTTTTTttt point 0 silent,SNP GAG->GAA[Glu->Glu],none {W02B3.7},{haw37341} 1240 CB6648_redo III 703550 1 T C 140 7.12 63 62 6 19 25 @,,Cccccc,,,cccCccCcCcCCC, point 0 nongenic,nongenic,nongenic -2777 upstream,-7099 upstream,12285 into {C24A1.2a},{C24A1.3b},{C24A1.2b} 1242 CB6648_redo III 705103 1 G C 95 3.19 63 62 3 8 11 @CCCCCcCC.., point 0 nongenic,nongenic,nongenic -1224 upstream,-8652 upstream,10732 into {C24A1.2a},{C24A1.3b},{C24A1.2b} 1243 CB6648_redo III 712134 1 A G 27 1.00 63 28 3 3 6 @GgC,.. point 0 nongenic,nongenic,nongenic,nongenic -12881 upstream,-15683 upstream,3388 into,3701 into {C24A1.1.1},{C24A1.3b},{C24A1.2a},{C24A1.2b} 1244 CB6648_redo III 752175 1 G T 255 1.00 63 62 0 38 38 @TtttttttttTtTTttTTtTTtTttTttTttTTtTTTt point 0 nongenic,nongenic -5489 upstream,246 into {T17H7.4a.1,T17H7.4a.2,T17H7.4b.1,T17H7.4b.2,T17H7.4c.1,T17H7.4c.2,T17H7.4g.2},{T17H7.4a.3,T17H7.4b.3,T17H7.4c.3,T17H7.4j} 1254 CB6648_redo III 803906 1 G T 14 1.00 63 62 4 5 9 @,,,.Ttttt point 0 nongenic,nongenic,nongenic -7914 upstream,5449 into,5528 into {B0412.2},{B0412.3.2},{B0412.3.1} 4249 CB6648_redo III 871577 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @....Gg indel 0 nongenic,nongenic -1728 upstream,193 downstream {T24C4.2},{T24C4.3} 4250 CB6648_redo III 1028769 0 X X -1000 -999.99 -1000 -1000 5 -1 4 @,,...TTt indel 0 nongenic,nongenic -366 upstream,21 downstream {Y34F4.5},{E_BE45912.2} 1267 CB6648_redo III 1107973 1 A T 255 1.00 63 62 0 14 14 @TtTtTttTTTTtTT point 0 nongenic 3939 into {F58B6.2} 1277 CB6648_redo III 1318411 1 C G 255 1.12 63 62 0 34 34 @GGGGgGGgggGgGGGgGGggGggGGGgGGGgggG point 0 SNP none {haw38527} 1278 CB6648_redo III 1323866 1 G A 255 1.00 63 62 0 28 28 @aaaaaAAaaaaaaaaAaaaaAaaAAAaa point 0 nongenic,nongenic -178 upstream,-4767 upstream {Y82E9BL.10},{Y82E9BL.18} 160820 CB6648_redo III 1567807 67 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 9017 to 9084 bp into {Y67D2.2} 1282 CB6648_redo III 1579536 1 T A 255 5.81 63 62 8 30 38 @,,a,a,,A,,aaa,AaAAAaAaaaAaaaAaaAAaAaAa point 0 nongenic 1249 into {Y22D7AL.7} 1283 CB6648_redo III 1579537 1 A T 255 5.50 63 62 7 30 37 @,t,t,,T,,ttt,TtTTTtTtttTtttTttTTtTtTt point 0 nongenic 1248 into {Y22D7AL.7} 1284 CB6648_redo III 1629052 1 C T 255 1.00 63 62 0 37 37 @tTTTtTTtttttTttTttTTttTttTttTTTtttttT point 0 SNP none {haw39277} 1285 CB6648_redo III 1636696 1 G A 255 1.00 63 62 0 23 23 @AaAAAaaaAAAaaAAaAaAaAAA point 0 SNP none {haw39295} 1286 CB6648_redo III 1636742 1 C A 255 1.00 63 62 0 18 18 @AAAAaAaAaAAAAAaaAa point 0 SNP none {haw39297} 1287 CB6648_redo III 1636775 1 G A 255 1.00 63 62 0 15 15 @aAaaAaaaAaAAAAa point 0 SNP none {haw39298} 1288 CB6648_redo III 1636782 1 G T 255 1.00 63 62 0 16 16 @ttTtttTtTTTTtttt point 0 SNP none {haw39299} 1290 CB6648_redo III 1863224 1 G T 255 1.75 63 62 0 56 56 @CTtttTTtttTtTTTTtTTtTTTtTTttTTTtTTTtttTTTtttTtTTttTTtTTT point 0 SNP none {haw39736} 1293 CB6648_redo III 2282476 1 G T 49 1.62 63 62 31 48 79 @tTTTTttTttTTtTttTttTTTTTTTTTTTtT,..,,,,.tT,,,TtT.,t.ttt.TTTT..t,.,,T,t....,.,.. point 0 nongenic,nongenic -8964 upstream,5211 into {Y54F10BM.15},{Y54F10BM.3} 1294 CB6648_redo III 2327180 1 C A 130 1.00 63 62 2 7 9 @AaaaaaA.. point 0 nongenic,nongenic 273 into,291 downstream {Y54F10BM.12},{Y54F10BM.2} 1295 CB6648_redo III 2327186 1 G A 139 1.00 63 62 0 7 7 @AaaAaAa point 0 nongenic,nongenic 279 into,297 downstream {Y54F10BM.12},{Y54F10BM.2} 1310 CB6648_redo III 2388431 1 T C 64 1.00 63 58 0 4 4 @CCcc point 0 SNP none {pas2305} 1311 CB6648_redo III 2405323 1 C T 255 1.00 63 62 0 31 31 @TTtttttTTTtTTtttTTTTtTttTTTtTTT point 0 SNP none {haw40696} 160821 CB6648_redo III 2564742 170 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2702 to 2872 bp into {Y54F10AM.1} 1320 CB6648_redo III 2565617 1 G A 255 1.06 63 62 0 50 50 @aAaaAaaAaaAaaaAAaaAaaaAAaaaaaAAaAAaAAAaAAAaAaaAaaa point 0 nongenic,nongenic -1638 upstream,556 into {Y54F10AM.11},{Y54F10AM.1} 1325 CB6648_redo III 2653185 1 A C 238 1.00 63 62 0 9 9 @cccccCCCC point 0 nongenic -4887 upstream {H19M22.2a,H19M22.2b,H19M22.2d} 1326 CB6648_redo III 2653187 1 A C 201 1.00 63 62 0 8 8 @ccccCCCC point 0 nongenic -4885 upstream {H19M22.2a,H19M22.2b,H19M22.2d} 1330 CB6648_redo III 2701751 1 A T 248 1.00 63 62 0 10 10 @TTTTTTtTTt point 0 SNP none {haw41217} 1331 CB6648_redo III 2728181 1 A T 255 1.00 63 62 0 26 26 @TTTTTTtTTTTTTtTTtTTTTTtTTt point 0 SNP none {haw41299} 1332 CB6648_redo III 2728812 1 G T 255 1.38 63 62 0 22 22 @TtttTtttttttTttttttTtt point 0 nongenic,nongenic -3729 upstream,2712 into {Y71H2AM.11},{Y71H2AM.7} 1334 CB6648_redo III 2809673 1 A G 255 1.00 63 62 0 12 12 @gggGgGGGGGGG point 0 nongenic 1320 into {Y71H2AM.3} 1339 CB6648_redo III 2980599 1 A T 255 1.00 63 62 0 39 39 @TTttttTttTtTTTtTttTTTttTtTTTtTTTtTTtttT point 0 SNP none {haw41691} 1343 CB6648_redo III 3162633 1 A G 255 1.00 63 62 0 18 18 @GGgGggGGggGGGGggGG point 0 nongenic -3640 upstream {R148.5a,R148.5b} 1344 CB6648_redo III 3162638 1 A G 255 1.00 63 62 0 20 20 @GgGggGGggGGGGggGGGgg point 0 nongenic -3635 upstream {R148.5a,R148.5b} 1345 CB6648_redo III 3252687 1 G T 255 1.00 63 62 0 33 33 @TtttTTtttTTttTTTTTTtTttTtTTtTTTTT point 0 nongenic,nongenic -2701 upstream,446 into {Y53G8AL.4},{Y53G8AL.3} 1346 CB6648_redo III 3254400 1 G C 255 1.12 63 62 0 21 21 @cCCcccCCCCCcCCCcCCccc point 0 nongenic,nongenic -1267 upstream,386 into {Y53G8AL.3},{Y53G8AM.4} 1347 CB6648_redo III 3255111 1 C A 255 1.00 63 62 0 15 15 @AaaAaAaaAaaaAaa point 0 SNP none {haw42163} 1348 CB6648_redo III 3255125 1 C T 255 1.00 63 62 0 21 21 @TtttTtttttTtTtTTTttTT point 0 SNP none {haw42164} 1349 CB6648_redo III 3255131 1 G T 255 1.00 63 62 0 21 21 @ttttTtTtTTTttTTTTTTTT point 0 nongenic,nongenic -1998 upstream,478 into {Y53G8AL.3},{Y53G8AM.4} 1350 CB6648_redo III 3271710 1 A G 255 1.00 63 62 0 20 20 @GggggGgggggggggggggg point 0 SNP none {haw42190} 1351 CB6648_redo III 3271738 1 T A 255 1.00 63 62 0 21 21 @aaaaaaaaaaAaaAAAAaAAA point 0 SNP none {haw42191} 1370 CB6648_redo III 3281311 1 T C 57 1.00 63 62 2 5 7 @ccccc,, point 0 nongenic,nongenic -2623 upstream,-985 upstream {Y53G8AM.8.1,Y53G8AM.8.2},{Y53G8AR.7a} 1371 CB6648_redo III 3304492 1 A T 73 1.00 63 62 1 4 5 @.tttT point 0 nongenic -6959 upstream {Y53G8AR.3} 1372 CB6648_redo III 3339896 1 C G 38 1.00 63 62 1 3 4 @ggG, point 0 nongenic -4968 upstream {F45H7.2a,F45H7.2b} 1373 CB6648_redo III 3346937 1 C G 71 1.00 63 62 2 5 7 @gGGgG.. point 0 nongenic,nongenic -14183 upstream,2073 into {F45H7.2c},{F45H7.2a,F45H7.2b} 1374 CB6648_redo III 3347670 1 A G 48 1.00 63 32 0 4 4 @GGGG point 0 nongenic,nongenic -13450 upstream,2806 into {F45H7.2c},{F45H7.2a,F45H7.2b} 1375 CB6648_redo III 3347671 1 G A 48 1.00 63 32 0 4 4 @AAAA point 0 nongenic,nongenic -13449 upstream,2807 into {F45H7.2c},{F45H7.2a,F45H7.2b} 1380 CB6648_redo III 3373714 1 G A 255 1.00 63 62 0 36 36 @AAAAaaAaAAAAaAaaAAaAaAaaaAaaaaaAaAAa point 0 SNP none {haw42340} 1388 CB6648_redo III 3387032 1 T C 255 1.81 63 62 0 24 24 @CcCCccCccCcCcccccccccccc point 0 missense AAC->AGC[Asn->Ser] {C56G7.2} 4263 CB6648_redo III 3390531 0 X X -1000 -999.99 -1000 -1000 5 -2 3 @,,,,,gGg indel 0 nongenic,nongenic -573 upstream,-623 downstream {C56G7.2},{C56G7.3} 1389 CB6648_redo III 3429127 1 A C 213 5.81 63 62 0 16 16 @cccccccccccccccc point 0 nongenic 721 into {K01A11.1} 4265 CB6648_redo III 3430900 0 X X -1000 -999.99 -1000 -1000 6 -1 5 @,.....ccc indel 0 nongenic -439 downstream {K01A11.1} 1392 CB6648_redo III 3436724 1 T G 21 1.00 63 48 3 4 7 @...GggG point 0 nongenic -5385 upstream {K01A11.1} 1399 CB6648_redo III 3463329 1 C G 255 1.00 63 62 0 44 44 @GGgGgGGGGGgGgggGGggGGggggggGgGGgggGgGGGGGGGG point 0 SNP none {haw42422} 1400 CB6648_redo III 3466299 1 G A 10 1.00 63 62 4 4 8 @AAAA.,,. point 0 nongenic 1349 into {C34C12.3} 1401 CB6648_redo III 3467137 1 T C 255 1.00 63 62 0 64 64 @CcCCCCCCCCCcCCCCCcCccCcCCcCCCCcCcCCCCCcCCcCCCcCcCCCCccCcCCCcCCCC point 0 SNP,three_prime_UTR none,none {haw42435},{C34C12.3} 1402 CB6648_redo III 3467466 1 C T 255 1.00 63 62 0 60 60 @TttTttttTTtTtttTTTtTtttTttTTTTTttTttTtttTtttTTtttttTTtTTtttT point 0 SNP,three_prime_UTR none,none {haw42438},{C34C12.3} 1405 CB6648_redo III 3468663 1 A C 255 1.00 63 62 0 25 25 @cccccCcccccccCCcCccCcCCcC point 0 nongenic,nongenic,nongenic -3324 upstream,1013 into,972 into {C34C12.5.1,C34C12.5.2},{C34C12.4.1},{C34C12.4.2} 1406 CB6648_redo III 3517342 1 C T 178 9.00 63 62 0 12 12 @TttTtTtTtTtt point 0 nongenic,nongenic -595 upstream,2250 into {M01F1.5.2},{M01F1.5.1} 1409 CB6648_redo III 3517372 1 A G 103 5.00 63 62 0 4 4 @gggg point 0 nongenic,nongenic -625 upstream,2220 into {M01F1.5.2},{M01F1.5.1} 1410 CB6648_redo III 3517380 1 A G 157 3.88 63 62 0 8 8 @ggggGggg point 0 nongenic,nongenic -633 upstream,2212 into {M01F1.5.2},{M01F1.5.1} 1411 CB6648_redo III 3540487 1 A T 227 1.00 63 62 3 14 17 @,.,tttTTTTTttTtTT point 0 nongenic,nongenic -3033 upstream,1106 into {C54C6.6},{C54C6.2} 1412 CB6648_redo III 3540491 1 C A 255 1.00 63 62 3 16 19 @,.,aaaAAAAAaaAaAAAA point 0 SNP none {haw42478} 1413 CB6648_redo III 3599952 1 G T 85 1.00 63 62 3 7 10 @,,,tTTtTTT point 0 nongenic,nongenic,nongenic,nongenic -18274 upstream,4748 into,834 into,9235 into {C48D5.3},{C48D5.2c},{C48D5.2b},{C48D5.2a} 1414 CB6648_redo III 3599953 1 T C 148 1.00 63 62 2 7 9 @,,cCCcCCC point 0 nongenic,nongenic,nongenic,nongenic -18275 upstream,4749 into,835 into,9236 into {C48D5.3},{C48D5.2c},{C48D5.2b},{C48D5.2a} 1415 CB6648_redo III 3606223 1 A T 255 1.00 63 62 0 28 28 @ttTtttttttTTtttTTtttTtTttttt point 0 nongenic,nongenic,nongenic -24545 upstream,5324 into,5753 into {C48D5.3},{C48D5.2b,C48D5.2c},{C48D5.2a} 1416 CB6648_redo III 3611202 1 C A 255 1.00 63 62 0 11 11 @aaaaaAAaaaA point 0 SNP none {haw42583} 1419 CB6648_redo III 3613833 1 G T 255 1.00 63 62 0 28 28 @TTTtTTTTtTttTTTTTTTtTTTtTTTt point 0 SNP none {haw42588} 1421 CB6648_redo III 3616756 1 C T 255 1.00 63 62 0 35 35 @TtTtTttttTttTTTtTttTtttttTTTTTtTTTT point 0 SNP none {haw42597} 1422 CB6648_redo III 3625872 1 T A 255 1.00 63 62 0 37 37 @AaaAAaAaaAAAAAAaaAAAAaAaaAAAAaaAAAaAa point 0 SNP none {haw42613} 4270 CB6648_redo III 3640946 0 X X -1000 -999.99 -1000 -1000 4 -3 1 @,...g indel 0 nongenic,nongenic,nongenic,nongenic -10405 upstream,-2381 downstream,-2700 downstream,-3408 upstream {C32A3.2},{C32A3.3a.2,C32A3.3a.3,C32A3.3b},{C32A3.3a.1},{C46F11.1a} 1423 CB6648_redo III 3641475 1 G T 255 1.00 63 62 0 29 29 @ttttTtttTttTTTtttttTtttTTttTT point 0 SNP none {haw42649} 1424 CB6648_redo III 3641888 1 G A 255 1.00 63 62 0 28 28 @AaaAaAaAAAAAAaaaaaAAAaaAAAaA point 0 SNP none {haw42650} 1425 CB6648_redo III 3645769 1 C A 255 1.00 63 62 0 22 22 @aaAaaaAAaaaaaaaAaAaAaa point 0 nongenic,nongenic 1404 into,1416 into {C46F11.1b},{C46F11.1a} 1426 CB6648_redo III 3645821 1 T G 255 1.00 63 62 0 32 32 @GGgGgGgGgGGGGggGgGGgggGggggGgGgG point 0 nongenic,nongenic 1456 into,1468 into {C46F11.1b},{C46F11.1a} 1427 CB6648_redo III 3666746 1 T A 35 1.81 63 52 2 5 7 @,AaAa,a point 0 nongenic,nongenic -2272 upstream,583 downstream {C46F11.4},{C46F11.6} 1428 CB6648_redo III 3666765 1 T G 44 2.19 63 62 4 8 12 @GgGg,gGgG,,. point 0 nongenic,nongenic -2291 upstream,564 downstream {C46F11.4},{C46F11.6} 1429 CB6648_redo III 3666893 1 T A 144 1.00 63 62 0 6 6 @AaAAAA point 0 nongenic,nongenic -2419 upstream,436 downstream {C46F11.4},{C46F11.6} 1430 CB6648_redo III 3666894 1 G T 150 1.00 63 62 0 6 6 @TtTTTT point 0 nongenic,nongenic -2420 upstream,435 downstream {C46F11.4},{C46F11.6} 1431 CB6648_redo III 3681015 1 T G 16 1.00 63 62 1 3 4 @ggG, point 0 nongenic -10599 upstream {C46F11.6} 1432 CB6648_redo III 3805251 1 C G 114 1.00 63 62 2 6 8 @,,GGGggg point 0 nongenic,nongenic -904 upstream,501 into {T24A11.2},{T24A11.3} 1433 CB6648_redo III 3867251 1 C A 6 1.00 63 62 3 4 7 @aaaA.,. point 0 nongenic,nongenic,nongenic,nongenic -578 upstream,-580 upstream,173 downstream,441 downstream {F13B10.2a.1,F13B10.2d.1,F13B10.2d.2},{F13B10.2a.2,F13B10.2a.3,F13B10.2c.1,F13B10.2c.2},{C36A4.9a.1},{C36A4.9a.2,C36A4.9a.3,C36A4.9b} 1439 CB6648_redo III 3995385 1 G A 248 1.00 63 62 0 9 9 @aaAAAAAaa point 0 SNP none {haw42814} 1442 CB6648_redo III 3995403 1 G T 218 1.00 63 62 0 7 7 @TTTttTT point 0 nongenic -3250 upstream {C36E8.2} 4280 CB6648_redo III 4019157 0 X X -1000 -999.99 -1000 -1000 2 -1 1 @,,ggGg indel 0 nongenic,nongenic -1537 upstream,-881 upstream {C36E8.5.1},{T02C12.2} 1443 CB6648_redo III 4056056 1 A T 163 1.00 63 62 0 11 11 @tTttTTttttt point 0 nongenic,nongenic -19242 upstream,1893 into {T02C12.1},{E03A3.2} 1444 CB6648_redo III 4056057 1 T A 155 1.00 63 62 0 10 10 @AaaAAaaaaa point 0 nongenic,nongenic -19243 upstream,1892 into {T02C12.1},{E03A3.2} 1445 CB6648_redo III 4056058 1 A C 171 1.00 63 62 0 7 7 @CCccccc point 0 nongenic,nongenic -19244 upstream,1891 into {T02C12.1},{E03A3.2} 4282 CB6648_redo III 4059721 0 X X -1000 -999.99 -1000 -1000 2 2 4 @,.cCc indel 0 inframe none {E03A3.4} 1446 CB6648_redo III 4112942 1 G C 255 1.00 63 62 0 37 37 @CcCcccCCCCCCcCCCccCCCcCCCcCcCCCCccccc point 0 SNP none {haw42904} 1447 CB6648_redo III 4209221 1 C A 255 1.00 63 62 0 10 10 @AAaaAAaAAA point 0 nongenic,nongenic -1312 upstream,983 downstream {F43C1.1},{R74.8a} 1448 CB6648_redo III 4209222 1 A C 255 1.00 63 62 0 10 10 @CCccCCcCCC point 0 nongenic,nongenic -1311 upstream,984 downstream {F43C1.1},{R74.8a} 1449 CB6648_redo III 4209243 1 C A 255 1.00 63 62 0 18 18 @AAAaAAAaAaAAAaAAAA point 0 nongenic -1290 upstream {F43C1.1} 1450 CB6648_redo III 4209244 1 G C 255 1.00 63 62 0 20 20 @CCCcCCCcCcCCCcCCCCCC point 0 nongenic -1289 upstream {F43C1.1} 1451 CB6648_redo III 4286569 1 C T 255 1.00 63 62 0 36 36 @tTtTtttTtTTTtTTtttTtTTTTTttTTtTTttTt point 0 SNP none {haw42951} 1454 CB6648_redo III 4440341 1 G A 255 1.00 63 62 1 45 46 @aaAAAAAAAaaaaAAaAaaaaaaA,AAAAAaaaaaaaAAaaaAaAA point 0 SNP none {haw42977,snp_C28A5[2]} 1455 CB6648_redo III 4440871 1 T A 255 1.00 63 62 1 36 37 @A.AaaaAaAAAAAaaaAAaAAAAAaAAaAAAaaAAaA point 0 SNP none {haw42978} 1456 CB6648_redo III 4445016 1 C G 3 1.00 63 2 2 4 6 @gGGG.. point 0 nongenic 882 downstream {C28A5.3} 1461 CB6648_redo III 4605000 1 T A 6 1.00 63 62 3 4 7 @,..Aaaa point 0 nongenic,nongenic -11613 upstream,7302 into {F10F2.3},{F10F2.1} 1462 CB6648_redo III 4628542 1 T G 4 1.81 63 44 1 5 6 @.Ggggg point 0 missense CAT->CAG[His->Gln] {F10F2.7} 1463 CB6648_redo III 4640495 1 A G 9 1.00 63 62 2 3 5 @..ggg point 0 missense AAT->AGT[Asn->Ser] {F10F2.5} 1465 CB6648_redo III 4689555 1 T C 9 1.00 63 62 2 4 6 @.,CcCc point 0 nongenic,nongenic -2395 upstream,287 into {T04A8.4},{T04A8.5} 4295 CB6648_redo III 4708950 2 X X -1000 -999.99 -1000 -1000 8 -5 3 @,,..,,,. indel -2 SNP none {uCE3-874} 1466 CB6648_redo III 4712952 1 C G 255 1.00 63 62 0 28 28 @GgGggGGggGggGGgGgggGgggggGgG point 0 missense,SNP TGG->TGC[Trp->Cys],none {T04A8.15},{haw43017,uCE3-875} 1467 CB6648_redo III 4750685 1 A T 87 2.06 63 62 15 20 35 @T...TT..,.t,t.t.tttt..TTTTT.Ttt,tt. point 0 nongenic 435 downstream {VB0393L.2} 1468 CB6648_redo III 4761634 1 G A 255 1.00 63 62 0 57 57 @AaAaaAaaAAAaAaaAAAaAaaAaAaAaAaAAAaAaaaAAAaaAaAaaaaaAaaAaa point 0 SNP none {haw43024} 1469 CB6648_redo III 4845216 1 A T 255 1.00 63 62 0 36 36 @TTTTttttttttTtttttttTTtTTtTTtTTTTTTT point 0 missense,SNP AAT->ATT[Asn->Ile],none {F26A1.2},{haw43039} 1470 CB6648_redo III 4947904 1 T C 3 1.00 63 62 2 2 4 @Cc,, point 0 nongenic,nongenic -4179 upstream,636 downstream {C26E6.2},{C26E6.3} 1471 CB6648_redo III 4962073 1 T A 75 1.00 63 62 1 5 6 @aaaaa. point 0 nongenic,nongenic,nongenic,nongenic -3548 upstream,-397 upstream,298 into,929 into {C27F2.2a},{C27F2.5.2},{C27F2.9},{C27F2.5.1} 1474 CB6648_redo III 5030205 1 G T 8 1.00 63 62 2 3 5 @,.TtT point 0 nongenic,nongenic -686 upstream,607 downstream {R144.1},{R144.2a} 1475 CB6648_redo III 5032432 1 C G 27 1.00 63 0 3 5 8 @ggGgG.,. point 0 nongenic,nongenic -4200 upstream,1541 into {C45G9.6b},{R144.1} 4302 CB6648_redo III 5066884 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @,...gggggg indel 0 nongenic,nongenic -1802 downstream,-2145 upstream {C45G9.11},{C45G9.2} 1478 CB6648_redo III 5105940 1 C G 23 1.00 63 2 2 5 7 @GGgGG.. point 0 missense GCG->GGG[Ala->Gly] {F54D8.6} 1479 CB6648_redo III 5333258 1 T G 29 1.00 63 28 1 4 5 @,Gggg point 0 missense TGC->GGC[Cys->Gly] {F52C9.1a} 1480 CB6648_redo III 5333259 1 G C 29 1.00 63 28 1 4 5 @,Cccc point 0 missense TGC->TCC[Cys->Ser] {F52C9.1a} 4306 CB6648_redo III 5471937 0 X X -1000 -999.99 -1000 -1000 9 -6 3 @,..,....,cc indel 0 nongenic -2498 upstream {F48E8.1a,F48E8.1b,F48E8.1c} 4308 CB6648_redo III 5577371 0 X X -1000 -999.99 -1000 -1000 2 2 4 @,,gg indel 0 nongenic 731 downstream {F09F7.1} 1494 CB6648_redo III 5595879 1 T G 175 1.00 63 62 0 5 5 @GggGg point 0 nongenic,splice_donor 155 into,none {F56D2.7},{F56D2.7} 4314 CB6648_redo III 5695323 1 X X -1000 -999.99 -1000 -1000 6 -3 3 @,,.,.. indel -1 SNP none {uCE3-925} 1496 CB6648_redo III 5699104 1 G A 108 1.00 63 12 1 4 5 @aAAa, point 0 nongenic,nongenic,nongenic -1144 upstream,586 into,720 into {B0336.8},{B0336.4a},{B0336.4b} 4316 CB6648_redo III 5706403 4 X X -1000 -999.99 -1000 -1000 12 -2 10 @..,.,..,..,, indel -4 SNP none {uCE3-927} 1500 CB6648_redo III 5765139 1 C T 6 1.00 63 2 3 3 6 @...TTT point 0 nongenic,nongenic -2692 upstream,626 into {B0244.11},{B0244.2} 1501 CB6648_redo III 5814252 1 T C 255 1.00 63 62 0 36 36 @CCCccccCcCCCcCCccCcCccccCccCccccCCcC point 0 SNP none {haw43460} 4319 CB6648_redo III 5814707 0 X X -1000 -999.99 -1000 -1000 11 -10 1 @........... indel 3 nongenic -289 upstream {R12B2.7} 1505 CB6648_redo III 5889988 1 T A 50 1.00 63 62 3 5 8 @AAaaa.,. point 0 nongenic,nongenic,nongenic -1262 upstream,320 into,360 downstream {C28H8.8},{C28H8.6b},{C28H8.6a,C28H8.6c} 1506 CB6648_redo III 5937104 1 T C 37 1.00 63 62 3 5 8 @,,.Ccccc point 0 nongenic,nongenic -3087 upstream,-35 upstream {F25B5.4a.2},{EGAP1.1} 1507 CB6648_redo III 5938647 1 T C 18 1.00 63 62 3 4 7 @.,.ccCC point 0 nongenic,nongenic -1544 upstream,-1578 upstream {F25B5.4a.2},{EGAP1.1} 1508 CB6648_redo III 5953899 1 A G 187 1.00 63 62 0 6 6 @ggGGGg point 0 missense TCT->CCT[Ser->Pro] {F25B5.7a,F25B5.7c} 1509 CB6648_redo III 5953900 1 T A 171 1.00 63 62 0 7 7 @aaAAAaA point 0 missense AAA->AAT[Lys->Asn] {F25B5.7a,F25B5.7c} 1510 CB6648_redo III 5953904 1 G T 146 1.00 63 62 0 6 6 @TTTtTt point 0 missense CCA->CAA[Pro->Gln] {F25B5.7a,F25B5.7c} 1511 CB6648_redo III 5962999 1 C T 255 1.00 63 62 0 29 29 @TtTtTTTttTttTTttTtTTTtTTtttTt point 0 SNP none {haw43492} 1512 CB6648_redo III 6033358 1 A T 11 1.00 63 62 0 7 7 @TTtGgGG point 0 missense TCC->ACC[Ser->Thr] {ZK328.7a} 1516 CB6648_redo III 6229465 1 C T 255 1.00 63 62 0 31 31 @TTtTTttTTTtttttTTtTTtTTtTtTttTt point 0 SNP none {haw43535} 1517 CB6648_redo III 6231877 1 C T 255 1.00 63 62 0 49 49 @TTttTTttTTTTtTttTtttTTttttttttttttTTTTttTTTTttTtT point 0 SNP none {haw43536} 4331 CB6648_redo III 6280051 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @,,.,,,cC indel 0 nongenic,nongenic,nongenic -1750 upstream,-276 upstream,-324 upstream {C18F10.7a.1},{F47D12.4a.1,F47D12.4a.2},{F47D12.4a.3} 1518 CB6648_redo III 6283135 1 A T 91 1.00 63 20 0 5 5 @ttttt point 0 nongenic,nongenic,nongenic 748 into,774 downstream,776 downstream {F47D12.5.1,F47D12.5.2},{F47D12.4a.1,F47D12.4a.2,F47D12.4b,F47D12.4c},{F47D12.4a.3} 1522 CB6648_redo III 6283155 1 C A 109 1.00 63 10 0 4 4 @AAAA point 0 nongenic,nongenic,nongenic 768 into,794 downstream,796 downstream {F47D12.5.1,F47D12.5.2},{F47D12.4a.1,F47D12.4a.2,F47D12.4b,F47D12.4c},{F47D12.4a.3} 1523 CB6648_redo III 6300175 1 G A 136 1.00 63 62 1 5 6 @aAAAa, point 0 nongenic,nongenic,nongenic,nongenic,nongenic -9145 upstream,435 into,648 into,890 into,906 downstream {F47D12.1a,F47D12.1b,F47D12.1c,F47D12.1d},{F47D12.9a.1,F47D12.9a.2,F47D12.9b.4},{F47D12.9b.3},{F47D12.9b.1,F47D12.9b.2},{F47D12.3} 1524 CB6648_redo III 6301650 1 A T 11 1.62 63 56 2 3 5 @..ttt point 0 nongenic,nongenic,nongenic,nongenic,nongenic -154 upstream,-155 upstream,-7670 upstream,1513 into,803 into {F47D12.9b.2},{F47D12.9b.4},{F47D12.1a,F47D12.1b,F47D12.1c,F47D12.1d},{F47D12.9a.1},{F47D12.9a.2,F47D12.9b.1,F47D12.9b.3} 1525 CB6648_redo III 6301652 1 T C 57 1.81 63 10 1 4 5 @.cccc point 0 nongenic,nongenic,nongenic,nongenic,nongenic -156 upstream,-157 upstream,-7668 upstream,1511 into,801 into {F47D12.9b.2},{F47D12.9b.4},{F47D12.1a,F47D12.1b,F47D12.1c,F47D12.1d},{F47D12.9a.1},{F47D12.9a.2,F47D12.9b.1,F47D12.9b.3} 4333 CB6648_redo III 6304028 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @,.,,.CC indel 0 nongenic,nongenic -5293 upstream,-865 upstream {F47D12.1a,F47D12.1b,F47D12.1c,F47D12.1d},{F47D12.9a.1} 1526 CB6648_redo III 6304029 1 T C 72 1.00 63 62 3 5 8 @CcCCc,,, point 0 nongenic,nongenic -5291 upstream,-866 upstream {F47D12.1a,F47D12.1b,F47D12.1c,F47D12.1d},{F47D12.9a.1} 1527 CB6648_redo III 6322256 1 C A 19 1.00 63 62 3 5 8 @AaAaa,,. point 0 missense GGG->TGG[Gly->Trp] {C56G2.5} 1528 CB6648_redo III 6337503 1 C T 13 1.81 0 12 0 5 5 @TTTTT point 0 nongenic,nongenic 948 downstream,951 downstream {C56G2.7},{C56G2.6.1,C56G2.6.2} 1529 CB6648_redo III 6371224 1 A G 255 1.00 63 62 0 49 49 @GgGGGgggGGGGgGggGgGgGgGGGgggggGGGgGgGGGGGGGGGGGGg point 0 missense,SNP GAT->GGT[Asp->Gly],none {C16A3.8},{haw43559} 1530 CB6648_redo III 6387539 1 G A 194 1.00 63 62 9 28 37 @aA,aaaAA.AAAAA,.AaaaaA,a..A,AA.aAAAAA point 0 silent AAG->AAA[Lys->Lys] {C16A3.3} 1531 CB6648_redo III 6428922 1 G A 149 1.00 63 62 1 7 8 @aaaaaAa. point 0 SNP none {haw43564} 1533 CB6648_redo III 6619216 1 C T 255 1.00 63 62 0 46 46 @TTTTTtTttTtTTTTTTTttTTtTTtTTTTTTttttTtttTTtTTT point 0 missense,SNP CTC->TTC[Leu->Phe],none {Y40D12A.1a},{haw43601} 1534 CB6648_redo III 6626308 1 G C 76 5.44 63 60 0 7 7 @CCcCCCC point 0 nongenic,nongenic -1396 upstream,-2636 upstream {C13B9.3},{C13B9.1.1,C13B9.1.2} 1535 CB6648_redo III 6626309 1 C A 66 8.50 63 60 0 4 4 @AAAA point 0 nongenic,nongenic -1397 upstream,-2635 upstream {C13B9.3},{C13B9.1.1,C13B9.1.2} 1536 CB6648_redo III 6626310 1 A C 61 4.88 63 62 4 5 9 @,,,,CCCCc point 0 nongenic,nongenic -1398 upstream,-2634 upstream {C13B9.3},{C13B9.1.1,C13B9.1.2} 1537 CB6648_redo III 6626314 1 C A 178 2.00 63 62 0 15 15 @AAAAaAAaaaaaaAa point 0 nongenic,nongenic -1402 upstream,-2630 upstream {C13B9.3},{C13B9.1.1,C13B9.1.2} 1538 CB6648_redo III 6626315 1 G C 178 2.00 63 62 0 15 15 @CCCCcCCccccccCc point 0 nongenic,nongenic -1403 upstream,-2629 upstream {C13B9.3},{C13B9.1.1,C13B9.1.2} 1540 CB6648_redo III 6688069 1 A T 165 1.00 63 62 0 6 6 @tttttt point 0 SNP none {haw43620} 1541 CB6648_redo III 6710989 1 A C 4 1.00 63 62 5 5 10 @cCccC..... point 0 nongenic,nongenic -891 upstream,-994 upstream {F37A4.5},{F37A4.8} 1542 CB6648_redo III 6757601 1 G C 29 1.00 63 62 2 3 5 @..ccc point 0 nongenic,nongenic,nongenic,nongenic -37973 upstream,11355 into,11357 into,8527 into {R05H11.1},{K07E12.1a.2},{K07E12.1a.1},{K07E12.1b} 1543 CB6648_redo III 6923579 1 G A 255 1.00 63 62 0 25 25 @AAAAAAAAAAAAAAAAAAAAAAaAA point 0 SNP none {haw43734} 4343 CB6648_redo III 6925969 0 X X -1000 -999.99 -1000 -1000 2 1 3 @,,tTtt indel 0 nongenic,nongenic,nongenic,nongenic -13551 upstream,-1656 downstream,-1930 downstream,-4005 upstream {T07E3.6a,T07E3.6b.1,T07E3.6b.2},{F57B9.7b},{F57B9.7a},{F57B9.6a.1} 1559 CB6648_redo III 7013025 1 G C 49 1.00 63 42 1 4 5 @cCcC. point 0 nongenic,nongenic -7727 upstream,3946 into {C06E8.5},{F11H8.2} 1560 CB6648_redo III 7013026 1 C A 43 1.00 63 48 1 3 4 @AaA. point 0 nongenic,nongenic -7728 upstream,3947 into {C06E8.5},{F11H8.2} 1561 CB6648_redo III 7013479 1 G A 255 1.00 63 62 0 54 54 @aaAaAaaAAAAAaAAaaaaAAAAaaAAAaaAaaAAaaaaaaaaaAaaAaAaAaA point 0 nongenic,nongenic -8181 upstream,4400 into {C06E8.5},{F11H8.2} 1562 CB6648_redo III 7021096 1 T G 58 1.00 63 62 3 6 9 @GgGGGg,,, point 0 nongenic,nongenic,nongenic -3 upstream,-561 upstream,-721 upstream {F11H8.1.1},{F11H8.3},{F11H8.1.2} 1563 CB6648_redo III 7028423 1 T A 255 1.00 63 62 0 38 38 @AAAaaaAAAAaaAAAaAAaaAaaAAaaAAAAAAAaaaa point 0 missense,SNP ACA->TCA[Thr->Ser],none {F11H8.4a,F11H8.4b},{haw43822} 1564 CB6648_redo III 7028541 1 G A 135 1.00 63 0 0 6 6 @aaaaaa point 0 nongenic 589 into {F11H8.4a,F11H8.4b} 1565 CB6648_redo III 7028623 1 A T 255 1.00 63 62 0 46 46 @ttttTTTTtTtTTTTTTtTTTTttTTTtttTTTtTtTTTtttTtTT point 0 SNP none {haw43823} 1566 CB6648_redo III 7028658 1 C T 255 1.00 63 62 0 35 35 @TtTTTtttTtTTtTTTTTTTtTTTTTTtTTtttTT point 0 missense,SNP GAA->AAA[Glu->Lys],none {F11H8.4a,F11H8.4b},{haw43824} 1568 CB6648_redo III 7033325 1 T G 255 1.00 63 62 0 37 37 @ggGGgGGggGGGGGgGGggGGGGGggggGgggGGgGg point 0 nongenic -4195 upstream {F11H8.4a,F11H8.4b} 1573 CB6648_redo III 7075888 1 C G 53 1.00 63 54 3 3 6 @.,,gGg point 0 silent CCG->CCC[Pro->Pro] {ZK418.6} 1574 CB6648_redo III 7075890 1 G C 65 1.00 63 52 2 4 6 @,,cCcc point 0 missense CCG->GCG[Pro->Ala] {ZK418.6} 4354 CB6648_redo III 7079762 0 X X -1000 -999.99 -1000 -1000 2 1 3 @,.CcC indel 0 nongenic,nongenic -756 downstream,-997 upstream {ZK418.7},{ZK418.6} 1575 CB6648_redo III 7118005 1 G A 255 1.00 63 62 0 41 41 @AAAaAAAAAAAAAAaAAAAAAaaAaAAAaaAaaaAAaaaAA point 0 SNP none {haw43886} 1576 CB6648_redo III 7214104 1 A C 255 1.00 63 62 0 44 44 @CCCcCCCCCCCcccCCcCcCCCCccCcCCccCCcCcCCCccCCC point 0 missense AGC->CGC[Ser->Arg] {R151.2a,R151.2b.1,R151.2b.2,R151.2b.3,R151.2b.4,R151.2b.5,R151.2c,R151.2d.1,R151.2d.2} 1577 CB6648_redo III 7236646 1 T G 15 2.50 63 8 0 4 4 @gggg point 0 nongenic,nongenic -2308 upstream,-2515 upstream {T20H4.3a,T20H4.3b},{T20H4.5} 1578 CB6648_redo III 7236653 1 G C 91 2.31 63 62 0 7 7 @ccccCCC point 0 nongenic,nongenic -2301 upstream,-2522 upstream {T20H4.3a,T20H4.3b},{T20H4.5} 1579 CB6648_redo III 7236655 1 A G 136 2.31 63 62 0 7 7 @ggggGGG point 0 nongenic,nongenic -2299 upstream,-2524 upstream {T20H4.3a,T20H4.3b},{T20H4.5} 1580 CB6648_redo III 7236657 1 C A 189 2.25 63 62 0 8 8 @aaaaAAAA point 0 nongenic,nongenic -2297 upstream,-2526 upstream {T20H4.3a,T20H4.3b},{T20H4.5} 1583 CB6648_redo III 7363303 1 T G 4 2.00 0 16 23 31 54 @..,g..gGg...Gg.AggG,....g.GG,,GG,gggGGG,.ggg..G.GGGGGg point 0 missense TAC->TCC[Tyr->Ser] {F08F8.5} 1584 CB6648_redo III 7363343 1 A G 10 2.00 63 32 18 38 56 @,.ggg..G.GGGGGgg,.ggGGG,gg,Gg.GgGGG.,G..g..gGgggg.gGgGg. point 0 missense TTT->CTT[Phe->Leu] {F08F8.5} 1609 CB6648_redo III 7453148 1 C G 8 5.75 10 2 1 13 14 @GGGGGGGGGGGGG, point 0 nongenic,nongenic -787 upstream,-856 upstream {Y69F12A.2a.1},{Y69F12A.2a.2,Y69F12A.2b} 1610 CB6648_redo III 7453152 1 G T 8 6.31 10 2 1 13 14 @TTTTTTCTTTTT,a point 0 nongenic,nongenic -783 upstream,-852 upstream {Y69F12A.2a.1},{Y69F12A.2a.2,Y69F12A.2b} 1612 CB6648_redo III 7528175 1 C T 55 1.00 63 62 1 4 5 @,Tttt point 0 SNP none {haw44215} 1613 CB6648_redo III 7587271 1 G T 67 1.00 63 62 1 5 6 @.TTtTT point 0 nongenic,nongenic,nongenic,nongenic -4369 upstream,2661 into,3011 into,3144 into {R13A5.10},{R13A5.1a.2,R13A5.1b,R13A5.1d},{R13A5.1a.1},{R13A5.1c} 4362 CB6648_redo III 7587556 0 X X -1000 -999.99 -1000 -1000 3 0 3 @...TT indel 0 nongenic,nongenic,nongenic,nongenic -2945 downstream,-3295 downstream,-3428 downstream,-4654 upstream {R13A5.1a.2,R13A5.1b,R13A5.1d},{R13A5.1a.1},{R13A5.1c},{R13A5.10} 1614 CB6648_redo III 7587557 1 G T 7 1.00 63 28 2 3 5 @ttt,, point 0 nongenic,nongenic,nongenic,nongenic -4655 upstream,2947 into,3297 into,3430 into {R13A5.10},{R13A5.1a.2,R13A5.1b,R13A5.1d},{R13A5.1a.1},{R13A5.1c} 1616 CB6648_redo III 7588318 1 A G 255 1.00 63 62 0 35 35 @gGGGgGggggGggggggGggggGGgGGgggggggg point 0 SNP none {haw44283} 1618 CB6648_redo III 7608528 1 T C 14 1.00 63 62 3 4 7 @CCCC.,, point 0 missense AAG->AGG[Lys->Arg] {T04A6.3} 1619 CB6648_redo III 7643354 1 T A 255 1.00 63 62 0 31 31 @AaaAAAaaaaaaAaaaaAAAAaAaaAAAAaa point 0 SNP none {haw44321} 1623 CB6648_redo III 7708718 1 G T 255 6.06 63 62 0 33 33 @TtTTTTtTTTtTTTtTTTTTtttTTTTtTtttT point 0 nongenic,nongenic -3660 upstream,682 into {C03B8.3},{C03B8.4} 4367 CB6648_redo III 7712933 1 X X -1000 -999.99 -1000 -1000 4 -1 3 @.,.. indel -1 SNP none {uCE3-1027} 1629 CB6648_redo III 7874571 1 C A 115 1.00 63 62 2 9 11 @AaaaaAAAA,, point 0 nongenic 865 into {C02C2.1} 1630 CB6648_redo III 7882068 1 C T 45 1.00 63 62 4 4 8 @.,,,Tttt point 0 nongenic,nongenic -3301 upstream,969 into {C02C2.5},{ZK688.9} 1631 CB6648_redo III 7882069 1 G C 83 1.00 63 44 2 6 8 @,,CCcccc point 0 nongenic,nongenic -3302 upstream,970 into {C02C2.5},{ZK688.9} 1632 CB6648_redo III 7924181 1 C T 255 1.00 63 62 0 38 38 @TTtTTtTTtttttTTTTTttTTTttTttTTtttTTTtt point 0 SNP none {haw44542} 1633 CB6648_redo III 7958663 1 C T 255 1.00 63 62 0 43 43 @TTttTtttTTTTTtttTTTTtTtTtTtttTtTtTtTTTttTTT point 0 SNP none {haw44573} 1636 CB6648_redo III 8064604 1 C T 255 1.00 63 62 0 47 47 @TtTtTtTtTtttTTtTTttttTtttTtTTTTtttTtttTTTtttTtT point 0 SNP none {haw44619,snp_K12H4[1]} 4372 CB6648_redo III 8068401 0 X X -1000 -999.99 -1000 -1000 2 0 2 @..GGgg indel 0 inframe none {K12H4.1} 1637 CB6648_redo III 8124694 1 G A 255 1.00 63 62 0 51 51 @aAAaaAAaAaAAaaAaAaaaaAaAAAaaAaaaAaAAaAAaAAaaAaaaAaa point 0 SNP none {haw44646} 1638 CB6648_redo III 8130396 1 G A 255 1.00 63 62 0 49 49 @aAAAAAaaAAaAaAaaAaaAaAaaaAAaaaaaaAaaaaaaaAAaaAaaa point 0 SNP none {haw44651} 1640 CB6648_redo III 8154517 1 T A 255 1.00 63 62 0 49 49 @aAaaaaAaAAaaAAAaAaaaaaaaaAaAaAAAAAaaAaAaaAAAaaAaa point 0 SNP none {haw44660} 1645 CB6648_redo III 8336690 1 A G 3 4.75 0 2 11 14 25 @,G,,.TG,.,,,gg.ggg,gggggg point 0 nongenic,nongenic -2538 upstream,731 downstream {ZC262.4},{ZC262.9} 1646 CB6648_redo III 8424571 1 T C 255 9.38 63 62 0 52 52 @cccCCcCCcCCCcccCCcCCccCCccccccCCcCCCccCcCccCccccCccc point 0 nongenic -1683 upstream {ZK1236.2} 1649 CB6648_redo III 8433819 1 A C 3 1.12 63 2 5 5 10 @,GG,,ccc,, point 0 nongenic -509 upstream {ZK1236.9} 160826 CB6648_redo III 8442015 127 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered,uncovered non-exonic, 1379 to 1506 bp into,non-exonic, 1382 to 1509 bp into,non-exonic, 1384 to 1511 bp into {ZK1236.7.2},{ZK1236.7.3},{ZK1236.7.1} 160827 CB6648_redo III 8442194 84 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered,uncovered non-exonic, 1243 to 1327 bp into,non-exonic, 1246 to 1330 bp into,non-exonic, 1248 to 1332 bp into {ZK1236.7.2},{ZK1236.7.3},{ZK1236.7.1} 1652 CB6648_redo III 8461978 1 C A 255 1.00 63 62 0 51 51 @aaaAaAAAAaAAAaaAAaaaaAaAAaaAAAaaAAaaaAAaAaaaaaaaAaa point 0 SNP none {haw44763} 1654 CB6648_redo III 8503007 1 A T 255 1.00 63 62 0 32 32 @TTTTTttttTtTTTTTTTtTTTttTtTTTTTT point 0 SNP none {haw44793} 1655 CB6648_redo III 8563931 1 G A 255 1.00 63 62 0 21 21 @aaaAaaAAAAAAAAAAaaaAA point 0 SNP none {haw44859} 4385 CB6648_redo III 8574370 0 X X -1000 -999.99 -1000 -1000 3 -2 1 @...aaa indel 0 nongenic -6640 upstream {C06E1.3} 1656 CB6648_redo III 8575624 1 C T 216 1.00 63 62 0 9 9 @TtTttTTtt point 0 nongenic -5385 upstream {C06E1.3} 1657 CB6648_redo III 8583354 1 C T 169 1.00 63 62 0 6 6 @ttTTTT point 0 three_prime_UTR none {C06E1.3} 1658 CB6648_redo III 8583358 1 G C 57 1.00 63 4 0 4 4 @CCCC point 0 three_prime_UTR none {C06E1.3} 4387 CB6648_redo III 8650750 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @...,GGg indel 0 inframe none {F22B7.2} 1665 CB6648_redo III 8684179 1 T A 255 1.00 63 62 0 33 33 @AaaaAaaAAAAAAAaaaaAAaAAAAAaAaaaAa point 0 SNP none {haw44984} 1666 CB6648_redo III 8684208 1 C T 255 1.00 63 62 0 36 36 @TTTTtTtttTtTtTtttTTTTttttTTtTttttTtt point 0 SNP none {haw44985} 1668 CB6648_redo III 8693607 1 G C 255 1.00 63 62 0 35 35 @CCCcccCcCccCccccccCcccccCCcccccCccc point 0 missense TGT->TCT[Cys->Ser] {B0303.7a} 1669 CB6648_redo III 8693611 1 G A 255 1.00 63 62 0 35 35 @AAaaaAaAaaAaaaaaaAaaaaaAAaaaaaAaaaa point 0 silent GGG->GGA[Gly->Gly] {B0303.7a} 1672 CB6648_redo III 8693743 1 G T 213 1.00 63 62 0 7 7 @TtTtTTt point 0 nongenic,nongenic,nongenic,nongenic -3135 upstream,200 into,362 downstream,892 downstream {B0303.7b},{B0303.7a},{B0303.4.1},{B0303.4.2} 1673 CB6648_redo III 8693773 1 A T 255 1.00 63 62 0 29 29 @TtTtTTtTtTTTTTTTTtTTTTTtTTTTT point 0 SNP none {haw44992} 1675 CB6648_redo III 8701737 1 C T 255 1.00 63 62 0 48 48 @TTtTttttTTTTtttTttTTTTTtttTtttttTTttTttTTTTTtTTt point 0 silent,SNP TCC->TCT[Ser->Ser],none {B0303.9},{haw44997} 1676 CB6648_redo III 8704000 1 T A 255 1.00 63 62 0 44 44 @AAAAaAAAAAaaAaaaaAAAaaaaaaAAaAaaAAAAaAaaAaaa point 0 SNP none {haw44999} 1677 CB6648_redo III 8706587 1 G C 12 1.00 63 62 2 3 5 @,,CCC point 0 missense CTT->GTT[Leu->Val] {B0303.11} 1678 CB6648_redo III 8710964 1 T A 255 1.00 63 62 0 25 25 @AAAaaAAAAAAAAAAAAaAAaAAAa point 0 SNP none {haw45004} 1679 CB6648_redo III 8711826 1 C T 237 1.00 63 62 0 13 13 @TTTTTTTTTTtTT point 0 SNP none {haw45005} 1680 CB6648_redo III 8711855 1 C A 87 1.00 63 62 1 5 6 @,AaAAa point 0 nongenic -1836 upstream {B0303.11} 1681 CB6648_redo III 8712013 1 G A 255 1.50 63 62 0 43 43 @aaaaaaAaaAaaaaaAaaaaaaaaaAAAaaaaaaaaAaAAAAA point 0 SNP none {haw45006} 1682 CB6648_redo III 8713028 1 A T 79 1.00 63 62 1 5 6 @Ttttt, point 0 nongenic,nongenic -3009 upstream,866 downstream {B0303.11},{B0303.14} 1683 CB6648_redo III 8713033 1 C T 123 1.00 63 62 1 6 7 @.TTTTTT point 0 nongenic,nongenic -3014 upstream,861 downstream {B0303.11},{B0303.14} 1684 CB6648_redo III 8733582 1 A T 255 1.00 63 62 0 59 59 @TtttttTttTTTttTtTttTTTtTTTtttTtttttttttTtTttTTttTTtTTtTTtTT point 0 SNP none {haw45014,uCE3-1086} 1685 CB6648_redo III 8733611 1 A T 255 1.00 63 62 0 68 68 @TtttttttttTtTttTTttTTtTTtTTtTTtTttttTtttTTTttTtTTtTtTtTttTtTTTtttTtT point 0 SNP none {haw45015,uCE3-1087} 1687 CB6648_redo III 8740761 1 C T 255 1.00 63 62 0 38 38 @TttTtTTTTttTtTTTTttttTTTtTtTTTTTTtTTTt point 0 SNP none {haw45017} 1688 CB6648_redo III 8742380 1 G A 255 1.00 63 62 0 49 49 @aAAaaAaaaaAAaaaaaAaaaAAAAAaAaAaaaaAAaAaAAAAAaaAaa point 0 SNP,three_prime_UTR none,none {haw45020},{ZK370.6} 1689 CB6648_redo III 8744441 1 C T 255 1.00 63 62 0 23 23 @TTtttttTtTTttTTttttTTTT point 0 SNP none {haw45021} 1690 CB6648_redo III 8752722 1 C T 255 1.00 63 62 0 39 39 @TTttttTTttttTtTTTtttTTTtTtttTTtTTttttTT point 0 SNP none {haw45024} 1691 CB6648_redo III 8758065 1 T C 255 1.00 63 62 0 58 58 @cCccccCCCcCccCCCCCcCcCCccCCcCCCcCCCcccCCCCCcCCCcCCCCcCCcCC point 0 SNP none {haw45027} 1692 CB6648_redo III 8810252 1 T A 137 1.50 63 18 0 6 6 @aAaaaA point 0 nongenic,nongenic -1016 upstream,-8555 upstream {F54F2.8.1},{F54F2.1} 1693 CB6648_redo III 8810253 1 T A 19 1.25 63 62 3 5 8 @aAaaa,,. point 0 nongenic,nongenic -1017 upstream,-8554 upstream {F54F2.8.1},{F54F2.1} 1696 CB6648_redo III 8810391 1 G A 155 1.00 63 62 0 6 6 @AAAAAA point 0 nongenic,nongenic -1155 upstream,-8416 upstream {F54F2.8.1},{F54F2.1} 1697 CB6648_redo III 8810392 1 T G 159 1.00 63 62 0 6 6 @GGGGGG point 0 nongenic,nongenic -1156 upstream,-8415 upstream {F54F2.8.1},{F54F2.1} 1698 CB6648_redo III 8810393 1 C T 166 1.12 63 62 0 7 7 @TTTTTTT point 0 nongenic,nongenic -1157 upstream,-8414 upstream {F54F2.8.1},{F54F2.1} 1703 CB6648_redo III 8890775 1 G T 61 1.00 63 62 0 7 7 @CcTttTT point 0 SNP none {haw45052} 1706 CB6648_redo III 8929470 1 A C 5 1.00 63 62 4 4 8 @,,..CccC point 0 nongenic,nongenic -2593 upstream,-3032 upstream {ZK643.1},{ZK643.7} 1708 CB6648_redo III 9025485 1 A T 255 1.00 63 62 0 41 41 @tTTTTTTTTtTTtTTTTTtTTTtTTTTttTttTttttTtTt point 0 SNP none {haw45122} 1709 CB6648_redo III 9066055 1 C G 255 1.00 63 62 0 28 28 @gggGgGgGgggGgGgGGgGGgGgggTGg point 0 nongenic 5616 into {R107.8} 1710 CB6648_redo III 9066056 1 G C 255 1.00 63 62 0 27 27 @ccCcCcCcccCcCcCCcCCcCcccCCc point 0 nongenic 5615 into {R107.8} 1711 CB6648_redo III 9101165 1 G T 221 0.00 63 62 0 14 14 @tttttttttttttt point 0 missense CAA->AAA[Gln->Lys] {ZK507.1} 1712 CB6648_redo III 9101166 1 C T 221 0.00 63 62 0 14 14 @tttttttttttttt point 0 non_start ATG->ATA[Met->Ile] {ZK507.1} 1713 CB6648_redo III 9101190 1 T A 66 2.00 63 62 2 4 6 @aaaa., point 0 nongenic,nongenic -21 upstream,-86 upstream {ZK507.1},{ZK507.3} 1714 CB6648_redo III 9101199 1 G A 70 2.00 63 62 2 4 6 @aaaa., point 0 nongenic,nongenic -30 upstream,-77 upstream {ZK507.1},{ZK507.3} 4404 CB6648_redo III 9150073 0 X X -1000 -999.99 -1000 -1000 2 2 4 @,.AA indel 0 nongenic,nongenic -2760 downstream,-4952 upstream {F54G8.4},{F54G8.1} 4405 CB6648_redo III 9260712 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,.,AAaa indel 0 nongenic,nongenic,nongenic,nongenic -25243 upstream,-263 downstream,-607 downstream,791 downstream {K01B6.1},{M01A8.2a},{M01A8.2b},{M01A8.1} 1715 CB6648_redo III 9263153 1 G A 255 1.00 63 62 0 50 50 @AaAaAaaaaaaaAaaAAaAaAAaaaaaaaaaAAaAaaAAaaAAaaaaaAA point 0 SNP none {haw45230} 1716 CB6648_redo III 9264263 1 G A 255 1.00 63 62 0 37 37 @AAaAaaaAAaaaaaAaAAAAAAAAaaAaaaAaaaaaa point 0 SNP none {haw45233} 1722 CB6648_redo III 9298564 1 C T 255 1.00 63 62 0 39 39 @tTtTttTtTttTtTtttTttTtttTTttTtTtTTTtttt point 0 SNP none {haw45256} 1723 CB6648_redo III 9341369 1 T C 255 1.00 63 62 0 55 55 @CCcCCcCccccCCcCCCCCCCCccccccccccCCccccCCCcccCCCcCCcCccc point 0 missense,SNP AGA->GGA[Arg->Gly],none {K04H4.1a},{haw45266} 1724 CB6648_redo III 9350628 1 C T 255 1.00 63 62 0 24 24 @TtTTtTTTtTttttttTttttttT point 0 missense,SNP GGA->GAA[Gly->Glu],none {K04H4.2c.1,K04H4.2c.2},{haw45273} 1725 CB6648_redo III 9350653 1 C T 255 1.00 63 62 0 33 33 @TttttttTTTttTtTttTTTtTtTTttTTtTTt point 0 missense,SNP GAG->AAG[Glu->Lys],none {K04H4.2c.1,K04H4.2c.2},{haw45274} 1726 CB6648_redo III 9350660 1 C T 255 1.00 63 62 0 34 34 @tTTTttTtTttTTTtTtTTttTTtTTtTttTtTT point 0 silent,SNP AGG->AGA[Arg->Arg],none {K04H4.2c.1,K04H4.2c.2},{haw45275} 1727 CB6648_redo III 9352561 1 C T 255 1.00 63 62 0 53 53 @tttttTtTTttTTtttTtTTtTTtTttttttttTtTtttTTtTTttTTtTtTT point 0 silent,SNP GAG->GAA[Glu->Glu],none {K04H4.2c.1,K04H4.2c.2},{haw45277} 1728 CB6648_redo III 9355598 1 A C 255 1.00 63 62 0 39 39 @cccccCCcCccCCccccCcCCccCccCccCccCcccccc point 0 nongenic,nongenic,nongenic -216 upstream,-234 upstream,-4570 upstream {K04H4.2a.1,K04H4.2a.2},{K04H4.2a.3,K04H4.2b,K04H4.2c.1,K04H4.2c.2},{K04H4.5} 1729 CB6648_redo III 9355599 1 C G 255 1.00 63 62 0 40 40 @ggggGGgGggGGggggGgGGggGggGggGggGggggggGg point 0 nongenic,nongenic,nongenic -217 upstream,-235 upstream,-4569 upstream {K04H4.2a.1,K04H4.2a.2},{K04H4.2a.3,K04H4.2b,K04H4.2c.1,K04H4.2c.2},{K04H4.5} 1730 CB6648_redo III 9409056 1 T G 144 1.69 63 62 0 16 16 @GgGGGGGgggGggggg point 0 nongenic -2513 upstream {T26G10.1} 1731 CB6648_redo III 9409292 1 C G 255 1.25 63 62 0 16 16 @ggGgGggGgggGgggG point 0 nongenic -2749 upstream {T26G10.1} 1735 CB6648_redo III 9448445 1 C G 255 1.00 63 62 0 28 28 @gggGGggGGGggGgggGGggGgGGgGGg point 0 SNP none {haw45304} 1736 CB6648_redo III 9449797 1 C T 255 1.00 63 62 0 30 30 @ttTtTTtttttTtTTTttTTTTTTTTtTTt point 0 SNP none {haw45305} 1737 CB6648_redo III 9450593 1 C A 255 1.00 63 62 0 51 51 @AaaaaaaaAAaAaaaaAaaaAaaaAAAaaaAaAAaAAaAaaAaaaAAAaaa point 0 SNP none {haw45306} 1738 CB6648_redo III 9451505 1 G C 255 1.00 63 62 0 42 42 @CcCccccCCccCCccccCCCCcCCcCccccCcccCCcCCcCC point 0 SNP,three_prime_UTR none,none {haw45307},{F54C8.7a} 1739 CB6648_redo III 9452439 1 G T 255 1.00 63 62 1 32 33 @ttTttTTttttttTttTtTttttTtttTTTTt. point 0 SNP none {haw45308,snp_F54C8[1]} 1740 CB6648_redo III 9463254 1 G A 55 1.00 63 62 2 5 7 @AaAaa,, point 0 nongenic,nongenic,nongenic,nongenic,nongenic -2419 upstream,233 into,365 downstream,365 into,392 downstream {B0464.9},{B0464.6.2,B0464.6.3},{B0464.5b.1},{B0464.6.1},{B0464.5c.1,B0464.5c.2} 1741 CB6648_redo III 9479166 1 G A 255 1.00 63 62 0 39 39 @aaAAaaaaAaAAAaaaaaAaaaaaAaaaaAaAAAAaAAA point 0 SNP none {haw45312} 160828 CB6648_redo III 9571116 148 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered non-exonic, 7757 to 7905 bp into,non-exonic, 8510 to 8658 bp into {C48B4.4a,C48B4.4b,C48B4.4c},{C48B4.4d} 1748 CB6648_redo III 9583725 1 A T 255 1.00 63 62 0 33 33 @TtTtTTTTtTtTttTTTttTTTtttttTTtTTt point 0 SNP none {haw45342} 1749 CB6648_redo III 9590111 1 T C 100 1.00 63 62 3 9 12 @,.,CCcCCCccc point 0 nongenic,nongenic,nongenic -7849 upstream,1983 into,1985 into {C48B4.3},{C48B4.1.2},{C48B4.1.1} 1750 CB6648_redo III 9590112 1 G T 84 1.00 63 62 3 9 12 @,.,TTtTTTttt point 0 nongenic,nongenic,nongenic -7850 upstream,1982 into,1984 into {C48B4.3},{C48B4.1.2},{C48B4.1.1} 1751 CB6648_redo III 9637545 1 A G 46 1.00 63 40 0 4 4 @Gggc point 0 nongenic -527 upstream {F58A4.11} 1752 CB6648_redo III 9643534 1 C G 255 1.00 63 62 0 34 34 @GgGgGGGGgggGGggGggGggGgGggGgGGggGg point 0 SNP none {uCE3-1110} 1753 CB6648_redo III 9643535 1 G C 255 1.00 63 62 0 32 32 @CcCCCCcccCCccCccCccCcCccCcCCccCc point 0 SNP none {uCE3-1111} 1754 CB6648_redo III 9647729 1 G T 95 1.00 63 0 0 4 4 @ttTt point 0 nongenic -10711 upstream {F58A4.11} 1756 CB6648_redo III 9754430 1 C A 255 1.00 63 62 0 37 37 @aAAAAaAAAAAAAaaAAaAaAAAAaaaaaAAaaaaaA point 0 missense,SNP GAG->GAT[Glu->Asp],none {T05G5.8.1,T05G5.8.2},{haw45405} 1757 CB6648_redo III 9783614 1 T C 8 1.00 63 62 2 3 5 @ccc,, point 0 nongenic,nongenic 391 into,491 downstream {R10E11.6a,R10E11.6b},{R10E11.2.1,R10E11.2.2} 1758 CB6648_redo III 9785421 1 G A 51 1.00 63 50 0 4 4 @Ccaa point 0 three_prime_UTR none {R10E11.6b} 1760 CB6648_redo III 9793256 1 A C 50 1.00 63 60 3 7 10 @cccccCC,.. point 0 nongenic,nongenic,nongenic -1009 upstream,-3715 upstream,202 into {ZK632.1a},{R10E11.5},{R10E11.9} 1761 CB6648_redo III 9796154 1 T C 255 1.00 63 62 0 63 63 @CCcCccCccCcCCCCccCCccCcCCcccccccCCcCcCcCCcCccCcccCccCccccccCCcc point 0 SNP none {haw45434} 1764 CB6648_redo III 9853804 1 T G 9 1.50 63 6 1 4 5 @GGGg, point 0 nongenic,nongenic,nongenic 170 downstream,397 downstream,83 downstream {K11H3.1b},{K11H3.1a,K11H3.1c.1,K11H3.1c.2,K11H3.1d.1,K11H3.1d.2},{K11H3.3} 1765 CB6648_redo III 9870315 1 T G 81 1.00 63 62 4 8 12 @....gGGGGggg point 0 nongenic,nongenic -2630 upstream,692 into {ZK757.4a,ZK757.4c},{ZK757.1} 1766 CB6648_redo III 9870316 1 G C 90 1.00 63 62 4 8 12 @....cCCCCccc point 0 nongenic,nongenic -2631 upstream,691 into {ZK757.4a,ZK757.4c},{ZK757.1} 1768 CB6648_redo III 9913766 1 C A 255 1.12 63 62 1 56 57 @AAAAAAaAAaaAaaaaAAaaAAAaaAaAaAA.aaaaaaaAaaaaaAAaaAaaAaaaa point 0 nongenic,nongenic,nongenic -3211 upstream,-390 upstream,-670 upstream {F40F12.5},{F40F12.7.1,F40F12.7.2},{F40F12.7.3} 1769 CB6648_redo III 9918742 1 C G 255 1.00 63 62 0 35 35 @gGGGGGGGgGgGGGGGGGGGGggGGggGGGGgggg point 0 silent GGG->GGC[Gly->Gly] {F40F12.3} 1770 CB6648_redo III 9920715 1 G T 255 1.00 63 62 0 29 29 @tttttTtTttTTTTtTTtTTtTtTtTttt point 0 SNP none {haw45505} 1771 CB6648_redo III 9920824 1 C T 255 1.00 63 62 0 9 9 @TttttTTTt point 0 SNP none {haw45506} 1772 CB6648_redo III 9920856 1 G T 255 1.00 63 62 0 35 35 @TttttTTTttTttTtTTtttTtTtttTttttTTTt point 0 SNP none {haw45507} 1773 CB6648_redo III 9938706 1 T C 85 4.31 63 6 34 72 106 @,Cc.ccccC.CCcCcc,,CCccC,Cc.CCCCCccCcCCcCCCCCc.CCCCCcCccCC.cccCCccCCCc..cccccccccCC,...,c,,.......,. point 0 nongenic 902 into {K03H1.5} 1774 CB6648_redo III 9938707 1 C A 7 4.31 63 62 50 52 102 @aa.A.AA.,.a,,,AaaA,A..AAAAAaa,aAAaAAAAAa.AA,AAaA.a,A..aaAAaaA,Aa..a.aaaa.aa,,,...,.,,.......,.,..,. point 0 nongenic 901 into {K03H1.5} 1777 CB6648_redo III 9942889 1 T A 255 1.00 63 62 0 46 46 @AAAAaAAAaaaaaaAAAAAAAaaaAAAAaaAAAAAaaAAaaaaAaA point 0 SNP none {haw45518} 1778 CB6648_redo III 9956571 1 A C 255 1.00 63 62 0 29 29 @CCcCccCcCCccCcCcccCcccCCCCccc point 0 nongenic,nongenic,nongenic -458 upstream,-682 upstream,-683 upstream {K03H1.2.1,K03H1.2.2},{R10E12.1a},{R10E12.1b,R10E12.1c,R10E12.1d} 1780 CB6648_redo III 9971899 1 G T 166 1.00 63 16 0 9 9 @ttttttttt point 0 nongenic 1863 into {R10E12.2} 4427 CB6648_redo III 10004045 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,,ggg indel 0 nongenic -363 upstream {C05B5.11} 1781 CB6648_redo III 10016572 1 A G 255 1.00 63 62 0 24 24 @gGGgGggGgGGGGgGGGgGGgGGg point 0 SNP none {haw45557} 1782 CB6648_redo III 10019611 1 C T 3 1.00 63 62 4 4 8 @..,.tTtt point 0 SNP none {haw45563} 1783 CB6648_redo III 10019932 1 G T 255 1.00 63 62 0 26 26 @tTTtTtTTTTTTTTTTTTTTtTtttT point 0 SNP none {haw45564} 1785 CB6648_redo III 10027251 1 C A 57 1.00 63 62 1 3 4 @AAA. point 0 nongenic,nongenic,nongenic -892 upstream,668 downstream,670 downstream {M04D8.3},{M04D8.2.2},{M04D8.2.1} 1787 CB6648_redo III 10031243 1 T A 52 1.00 63 62 1 4 5 @,aaAA point 0 nongenic,nongenic -222 upstream,996 downstream {M04D8.4},{M04D8.5} 1788 CB6648_redo III 10031246 1 G T 175 1.00 63 52 0 5 5 @ttTTt point 0 SNP none {uCE3-1131} 1789 CB6648_redo III 10032182 1 C T 96 1.00 63 50 2 5 7 @ttttT., point 0 SNP none {haw45577} 1790 CB6648_redo III 10032184 1 A C 51 1.00 63 62 2 5 7 @ccccC., point 0 nongenic,nongenic -1163 upstream,55 downstream {M04D8.4},{M04D8.5} 1791 CB6648_redo III 10034770 1 A T 133 1.00 63 62 2 7 9 @..TTttttT point 0 nongenic,nongenic,nongenic -1127 upstream,-1560 upstream,227 into {M04D8.6},{M04D8.5},{M04D8.8} 1792 CB6648_redo III 10035095 1 G T 255 1.00 63 62 0 22 22 @TtTTTTTTtttTTTTTtTtTTT point 0 SNP none {haw45579} 1793 CB6648_redo III 10035117 1 G T 191 1.00 63 62 0 7 7 @TtTtTTT point 0 nongenic,nongenic -780 upstream,120 downstream {M04D8.6},{M04D8.8} 1794 CB6648_redo III 10035128 1 G T 131 1.00 63 62 0 4 4 @TTtT point 0 nongenic,nongenic -769 upstream,131 downstream {M04D8.6},{M04D8.8} 1795 CB6648_redo III 10035139 1 C T 173 1.00 63 62 0 5 5 @TtTTt point 0 nongenic,nongenic -758 upstream,142 downstream {M04D8.6},{M04D8.8} 1796 CB6648_redo III 10035170 1 C T 255 1.56 63 62 0 36 36 @TtTTtTTttTtttttTttTtttTTTTtTttttTttt point 0 nongenic,nongenic -727 upstream,173 downstream {M04D8.6},{M04D8.8} 1797 CB6648_redo III 10035184 1 A T 255 3.31 63 62 0 46 46 @TTtTTttTtttttTttTtttTTTTtTttttTtttTtttttTttttT point 0 nongenic,nongenic -713 upstream,187 downstream {M04D8.6},{M04D8.8} 1798 CB6648_redo III 10035309 1 G T 255 1.00 63 62 0 54 54 @tTTTTTTTtTTTTTtTTTTtTTTtTtTTtTTTTtttTtTTTTTTtTTTttTTTT point 0 SNP none {haw45580} 1799 CB6648_redo III 10035384 1 G A 255 1.00 63 62 0 49 49 @AAAaAAAAaaAaAaAaaAaaAaaAAaaAAAaAaaAAAAaaAaAaaaaaA point 0 SNP none {haw45581} 1800 CB6648_redo III 10035425 1 C A 255 1.50 63 62 0 58 58 @aAaAaaaaaAaaAAAAAAAaAAaaAAAAaaAAaAaaAAAaAAAAAAaaAAaAAAaaAA point 0 nongenic,nongenic -472 upstream,428 downstream {M04D8.6},{M04D8.8} 1801 CB6648_redo III 10036023 1 G A 255 1.00 63 62 0 44 44 @aaaaaAatAaAaaaaAAAaaaAaaaAaAaaAaAaaAaaAaAaaa point 0 SNP none {haw45582} 160829 CB6648_redo III 10100796 59 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 623 to 682 bp into {T16H12.6} 1805 CB6648_redo III 10100858 1 C G 75 1.00 63 58 0 4 4 @Gggg point 0 nongenic,nongenic -2883 upstream,620 into {T16H12.5b.1},{T16H12.6} 4435 CB6648_redo III 10131665 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,.tt indel 0 nongenic,nongenic,nongenic -453 downstream,-5301 upstream,-954 downstream {ZK1128.6b.1,ZK1128.6b.2},{ZK1128.7},{ZK1128.6a} 1814 CB6648_redo III 10131666 1 C T 15 1.00 63 16 2 2 4 @Tt.. point 0 nongenic,nongenic,nongenic -5299 upstream,452 into,953 into {ZK1128.7},{ZK1128.6b.1,ZK1128.6b.2},{ZK1128.6a} 1817 CB6648_redo III 10147954 1 T G 171 1.56 63 62 0 7 7 @gGgggGg point 0 nongenic -4734 upstream {K08E5.2a,K08E5.2b.2,K08E5.2b.3} 1818 CB6648_redo III 10148031 1 C G 255 1.25 63 62 0 29 29 @GgggGGgggGggGGGgGgGGGGgGgGggg point 0 nongenic -4657 upstream {K08E5.2a,K08E5.2b.2,K08E5.2b.3} 1830 CB6648_redo III 10227407 1 C T 3 6.75 0 6 78 81 159 @.t...,..,Tt.t,..T,...,,T,Tt.T.T.,tt.t,Ttt.ttTTT,,,t,,,T.ttTtTTT..TtT,TTT,ttT,,,t,TTtTtTT,tt,Tt,,.tT point 0 nongenic 681 downstream {Y70G10A.2} 1833 CB6648_redo III 10277507 1 C T 255 1.00 63 62 0 36 36 @tttTtTttttttTtttTTtttTtttTtTTTTTtTTt point 0 nongenic,nongenic,nongenic -10231 upstream,-1515 upstream,967 into {R01H10.7},{K10G9.3},{R01H10.8} 1834 CB6648_redo III 10282658 1 T G 60 1.00 63 22 1 4 5 @GGGg, point 0 nongenic -3158 upstream {K10G9.2} 1835 CB6648_redo III 10282659 1 C T 22 1.00 63 60 2 4 6 @TTTt,, point 0 nongenic -3157 upstream {K10G9.2} 1836 CB6648_redo III 10287323 1 C T 255 1.00 63 62 0 30 30 @TttTTTTtTTttTtTTTtTTTtTTTTtTTt point 0 SNP none {haw45760} 1838 CB6648_redo III 10289344 1 G C 255 1.00 63 62 0 35 35 @CCCcCccccCCCccCcccCCcCcCCCCCCCCcCCC point 0 SNP none {haw45764} 1839 CB6648_redo III 10291745 1 C A 67 1.00 63 62 1 3 4 @aaa. point 0 nongenic -3282 upstream {K10G9.1} 1840 CB6648_redo III 10291756 1 T A 185 1.00 63 62 0 8 8 @aaaaAaaA point 0 nongenic -3271 upstream {K10G9.1} 1842 CB6648_redo III 10320217 1 A G 126 5.75 63 56 0 4 4 @gggg point 0 nongenic,nongenic,nongenic -732 upstream,301 downstream,326 downstream {T07C4.10},{T07A5.6b},{T07A5.6c} 1843 CB6648_redo III 10354930 1 A T 255 1.00 63 62 0 45 45 @TTtTtTtTtttttTTtttttTtTTtTTTTTtTTttTTTTTtttTT point 0 SNP,three_prime_UTR none,none {haw45800},{T07C4.3b} 1845 CB6648_redo III 10361911 1 T G 255 1.00 63 62 0 24 24 @GgGGggGGgGggGGGgGgggGGgg point 0 SNP none {haw45805} 1846 CB6648_redo III 10368133 1 G A 255 1.00 63 62 0 51 51 @AAAAaaAaAaaAAaAaAAAaAAaaAAaaAaaAaaAAaAAaaaAAAaaaAAA point 0 SNP none {haw45808} 1847 CB6648_redo III 10368773 1 C G 255 1.00 63 62 0 27 27 @ggggggggggggggggGgggggggGgG point 0 silent,SNP TCC->TCG[Ser->Ser],none {C38H2.1},{haw45810} 1848 CB6648_redo III 10368847 1 G A 78 1.00 63 24 1 3 4 @Aaa, point 0 nongenic,nongenic,nongenic -11260 upstream,-12816 upstream,3861 into {T07C4.1.1},{C38H2.2},{C38H2.1} 1870 CB6648_redo III 10385216 1 C G 11 1.00 63 36 1 3 4 @.ggg point 0 nongenic,nongenic 15 downstream,301 downstream {C38H2.2},{C38H2.3} 1871 CB6648_redo III 10388877 1 A T 107 1.00 63 62 1 5 6 @TTtTT. point 0 nongenic -2413 upstream {C38H2.3} 4439 CB6648_redo III 10397838 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @,,,.GG indel 0 nongenic -1872 upstream {M03C11.1} 1872 CB6648_redo III 10399084 1 C A 255 1.00 63 62 0 43 43 @AAaAAaAaaaAaAAaaAAaAAAAAAaaAaAaaAAAAAAaaaaa point 0 SNP none {haw45839} 1874 CB6648_redo III 10428172 1 A T 72 1.00 63 62 2 4 6 @,,Tttt point 0 nongenic,nongenic,nongenic -298 upstream,-300 upstream,49 downstream {M03C11.7.1},{M03C11.7.2},{M03C11.8} 1875 CB6648_redo III 10428174 1 T G 73 1.00 63 62 2 4 6 @,,Gggg point 0 nongenic,nongenic,nongenic -300 upstream,-302 upstream,47 downstream {M03C11.7.1},{M03C11.7.2},{M03C11.8} 1876 CB6648_redo III 10454269 1 G A 255 1.00 63 62 0 20 20 @aaaaaAaAAaAaAAAaaAaa point 0 SNP none {haw45927} 4441 CB6648_redo III 10460400 0 X X -1000 -999.99 -1000 -1000 9 -6 3 @,,,,,,.,,GGg indel 0 nongenic,nongenic -1115 upstream,-63 upstream {D2045.1a,D2045.1b.2,D2045.1c},{D2045.2} 1877 CB6648_redo III 10460401 1 A G 10 1.00 63 62 4 9 13 @GGGGGGgGG,,., point 0 nongenic,nongenic -1113 upstream,-64 upstream {D2045.1a,D2045.1b.2,D2045.1c},{D2045.2} 1878 CB6648_redo III 10482439 1 G A 255 1.00 63 62 0 30 30 @AaaAAaAaaAaaAAAAAaaaAaaaAaAAaA point 0 nongenic,nongenic,nongenic -5576 upstream,226 into,407 downstream {F43D9.1},{D2045.8},{D2045.7} 1880 CB6648_redo III 10498007 1 G A 255 1.00 63 62 0 30 30 @aAAAaaaaAaaAAaaaaAAAaAaaAAAaAa point 0 SNP none {haw45998} 1881 CB6648_redo III 10498115 1 T C 25 1.00 63 18 0 4 4 @CCCc point 0 silent TTT->TTC[Phe->Phe] {F43D9.1} 1882 CB6648_redo III 10498116 1 C A 25 1.00 63 18 0 4 4 @AAAa point 0 missense CAG->AAG[Gln->Lys] {F43D9.1} 1883 CB6648_redo III 10498117 1 A G 39 1.00 63 18 0 6 6 @GGgGGg point 0 missense CAG->CGG[Gln->Arg] {F43D9.1} 1884 CB6648_redo III 10498118 1 G C 19 1.00 63 24 0 5 5 @CaCCc point 0 missense CAG->CAC[Gln->His] {F43D9.1} 1885 CB6648_redo III 10500602 1 G A 255 1.00 63 62 0 31 31 @AaAAaaAAAAAAaaaaAAaaAaAaaaAaaaa point 0 silent,SNP TTC->TTT[Phe->Phe],none {F43D9.2},{haw46003} 1886 CB6648_redo III 10500798 1 C T 255 1.00 63 62 0 30 30 @ttTtttttttTttttttTtttTTttttttT point 0 SNP none {haw46004} 1887 CB6648_redo III 10500854 1 C T 255 1.00 63 62 0 39 39 @tttttTttttTttTttTttTTtTTttTtttTttttTTTt point 0 SNP none {haw46006} 1888 CB6648_redo III 10501170 1 C T 255 1.00 63 62 0 33 33 @TTTTTTTTtTTTtTTTttTTTtTTTTtTTTTtt point 0 SNP none {haw46010} 1889 CB6648_redo III 10502428 1 G A 255 1.00 63 62 0 34 34 @aaAaaaaaaAaAaaAaAaaaAAAaaAaaAAAaaa point 0 SNP none {haw46016} 1890 CB6648_redo III 10502726 1 C T 255 1.00 63 62 0 22 22 @TTTTTTttTttttTTtTTttTT point 0 SNP none {haw46017} 1891 CB6648_redo III 10503428 1 G A 255 1.00 63 62 0 34 34 @AAaAaAAAAAAaaAAAAaaaAAAAAaAaAAAAaA point 0 nongenic,nongenic 311 into,531 downstream {F43D9.2},{F43D9.5} 1892 CB6648_redo III 10512573 1 C T 255 1.00 63 62 0 39 39 @tttttttttttttTttTttttTTTtttttTtTTttttTT point 0 SNP,three_prime_UTR none,none {haw46030},{F43D9.3a} 1893 CB6648_redo III 10512825 1 C T 255 1.00 63 62 0 48 48 @TTTttTTTTttTTtTtttTtTtTTTTTTTtTtttttTTTTttTtTTTt point 0 SNP,three_prime_UTR none,none {haw46031},{F43D9.3a} 1894 CB6648_redo III 10513932 1 C T 255 1.00 63 62 0 38 38 @tTTTTTTTtTTTttttTTTttTTTttTTtTtTtTtTTT point 0 SNP none {haw46034} 1895 CB6648_redo III 10514115 1 G A 255 1.00 63 62 0 34 34 @AaAAaaaAaAaAAaaAaAAaaaaAaaaAAaaAaA point 0 SNP none {haw46035} 4443 CB6648_redo III 10514381 1 X X -1000 -999.99 -1000 -1000 9 -5 4 @,,,,,..,, indel -1 SNP none {uCE3-1167} 1896 CB6648_redo III 10515057 1 G C 110 1.00 63 18 0 6 6 @CCccCc point 0 nongenic,nongenic -5504 upstream,2807 into {T21C12.1b},{F43D9.3b} 4445 CB6648_redo III 10516781 0 X X -1000 -999.99 -1000 -1000 1 0 1 @.TTt indel 0 nongenic,nongenic -1083 downstream,-3781 upstream {F43D9.3b},{T21C12.1b} 4447 CB6648_redo III 10520155 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @.,,.TTT indel 0 nongenic,nongenic -407 upstream,-533 upstream {T21C12.1b},{T21C12.1a} 1898 CB6648_redo III 10520298 1 A C 255 1.00 63 62 0 40 40 @cccCCcCCcCcCccCCcCCCcccccCCcccccCCCCcCcC point 0 SNP none {haw46040} 1899 CB6648_redo III 10528187 1 G C 255 1.00 63 62 0 47 47 @ccCCcCcccccccccCccCCcCCCCCcCcccccCccCCccccccCCC point 0 SNP none {haw46050} 4448 CB6648_redo III 10529997 0 X X -1000 -999.99 -1000 -1000 2 2 4 @.,aa indel 0 inframe none {T21C12.1a} 1903 CB6648_redo III 10534164 1 A T 11 1.00 63 10 1 3 4 @,ttt point 0 nongenic -1247 upstream {T21C12.2} 1904 CB6648_redo III 10534165 1 G A 27 1.00 63 10 1 5 6 @,aaaAa point 0 nongenic -1246 upstream {T21C12.2} 4450 CB6648_redo III 10551513 0 X X -1000 -999.99 -1000 -1000 4 -3 1 @,,.,Cccc indel 0 three_prime_UTR none {T21C12.4b} 4451 CB6648_redo III 10552635 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,.,gg indel 0 three_prime_UTR none {T21C12.4b} 1906 CB6648_redo III 10552636 1 C G 38 1.00 63 62 2 3 5 @GgG.. point 0 three_prime_UTR none {T21C12.4b} 1907 CB6648_redo III 10553062 1 A C 53 1.00 63 24 2 4 6 @.,CcCc point 0 missense GTT->GGT[Val->Gly] {T21C12.4a,T21C12.4b} 1910 CB6648_redo III 11016885 1 T C 255 1.00 63 62 0 17 17 @ccCCcccCCCCCcCccC point 0 SNP none {haw46705} 1913 CB6648_redo III 11294888 1 C T 255 2.00 63 62 13 54 67 @t,tT,tTTt,T,ttttttttT,TTtTTtT,tTTtttTtT,,tttTtt,tTtt,,,T,tTTTtttTtt point 0 nongenic,nongenic,nongenic -4304 upstream,4094 into,4099 into {Y47D3A.22},{Y47D3A.26.2,Y47D3A.26b},{Y47D3A.26.1} 1914 CB6648_redo III 11326567 1 G T 126 1.00 63 62 3 10 13 @TtttttttTt,., point 0 SNP,three_prime_UTR none,none {haw46989},{T28D6.6} 1915 CB6648_redo III 11326568 1 A G 124 1.00 63 62 3 9 12 @gggggggGg,., point 0 SNP,three_prime_UTR none,none {haw46990},{T28D6.6} 160830 CB6648_redo III 11399936 160 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2263 to 2423 bp into {Y47D3B.3} 1919 CB6648_redo III 11472333 1 T A 233 1.00 63 62 0 19 19 @aaaaaaaaaaaaaaaaaaa point 0 nongenic -1644 upstream {Y47D3B.9} 1924 CB6648_redo III 11480573 1 G A 255 1.00 63 62 0 40 40 @aAAAaAAAAaAaAAAAAaAAAAAAAaaAAaaAAAAAAAaA point 0 SNP none {haw47230} 1925 CB6648_redo III 11486301 1 G C 255 1.00 63 62 0 56 56 @CccccCCCCccCcccCCCcCccCCcccCccCcccCcccCccccCCCcccCccCCCc point 0 SNP none {haw47238} 1926 CB6648_redo III 11504646 1 C A 255 1.00 63 62 0 65 65 @AAAaaaAaaAaAAAaaAaAaaAAAAAaaaAAAAaAAaAAAaAaaAaaaAAAaAAAaAAAaAaaAa point 0 SNP none {haw47276} 1927 CB6648_redo III 11516787 1 C T 255 1.00 63 62 0 65 65 @tttTTttTTtTTTttttTttTttTtttTtTTTtTtTTTTTTttttTTttTTTTTttTTTTTTTTT point 0 SNP none {haw47292} 1931 CB6648_redo III 11529305 1 G A 155 1.00 63 62 0 5 5 @AaaAa point 0 nongenic,nongenic -5251 upstream,3051 into {Y66D12A.14},{Y66D12A.15} 1932 CB6648_redo III 11529315 1 T A 129 1.00 63 62 0 5 5 @AaaAa point 0 nongenic,nongenic -5241 upstream,3061 into {Y66D12A.14},{Y66D12A.15} 1935 CB6648_redo III 11529397 1 T G 16 1.19 63 62 21 32 53 @,,,.,,,g,,,GGgG..Gg.gG.g..gg,G.ggGg.gGGGg,ggG,gGggggg point 0 nongenic,nongenic -5159 upstream,3143 into {Y66D12A.14},{Y66D12A.15} 1936 CB6648_redo III 11543276 1 G A 255 1.00 63 62 0 43 43 @aAAaaAAAAAAAaaAAaAaAAAAAaAAAaaaAaAaAAaAaAAa point 0 missense,SNP GGA->GAA[Gly->Glu],none {Y66D12A.14},{haw47330,uCE3-1248} 1937 CB6648_redo III 11573608 1 T G 28 1.00 63 28 3 5 8 @ggGgG... point 0 nongenic,nongenic -496 upstream,446 downstream {Y66D12A.8},{Y66D12A.9} 1938 CB6648_redo III 11573609 1 G A 28 1.00 63 28 3 4 7 @aAaA... point 0 nongenic,nongenic -495 upstream,447 downstream {Y66D12A.8},{Y66D12A.9} 1939 CB6648_redo III 11576713 1 C G 255 1.00 63 62 0 43 43 @GggGgGgGGGgGGgggGGgGgggGgGgggggggggggGggggg point 0 missense,SNP GCA->GGA[Ala->Gly],none {Y66D12A.8},{haw47425} 1941 CB6648_redo III 11682308 1 G T 255 5.62 63 62 0 37 37 @TTTTTTTTTTTTTTTTtTTTtTTTttTTTTTTTtTTT point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -14263 upstream,11353 into,6764 into,6857 into,6864 into,7764 into {Y41C4A.6},{Y41C4A.4c},{Y41C4A.4b},{Y41C4A.4a},{Y41C4A.4d},{Y41C4A.4e} 1943 CB6648_redo III 11694298 1 C A 230 1.00 63 62 0 14 14 @aAAaAaaaaAAaaA point 0 nongenic,nongenic,nongenic -2273 upstream,577 downstream,580 downstream {Y41C4A.6},{Y41C4A.4a},{Y41C4A.4e} 1944 CB6648_redo III 11809758 1 T C 255 1.00 63 62 1 18 19 @cCccccccc,cccCCcCCc point 0 nongenic,nongenic -121 upstream,313 downstream {C18D11.6},{C18D11.9} 1945 CB6648_redo III 11861725 1 A T 255 1.00 63 62 0 24 24 @TttTtTtttTtTTttTTtTtTTtt point 0 nongenic,nongenic 408 into,564 downstream {Y56A3A.2},{Y56A3A.4} 1949 CB6648_redo III 11996058 1 A C 3 1.12 63 0 2 7 9 @CC,CCC,Cc point 0 nongenic,nongenic 3278 into,3418 into {Y56A3A.32.2},{Y56A3A.32.1} 1950 CB6648_redo III 12008909 1 C G 255 4.25 63 62 0 34 34 @GGgGGGGgGGGGGgggGgggGGGGGGGGgGGggG point 0 nongenic,nongenic -11521 upstream,-6075 upstream {Y79H2A.1a.1},{Y56A3A.33} 1952 CB6648_redo III 12060765 1 T A 255 1.00 63 62 0 22 22 @aaAAAAaAaAAAaAaaaaaaAa point 0 SNP none {haw48229} 1953 CB6648_redo III 12103249 1 G T 119 1.00 63 62 5 11 16 @tTtttttTttT...,, point 0 missense CAC->AAC[His->Asn] {Y75B8A.3} 1955 CB6648_redo III 12215131 1 A T 255 1.00 63 62 0 54 54 @ttttttttTttttttttTttttttTtTttTtttTttTtTTTTTTtttTttTttt point 0 SNP none {haw48426} 1956 CB6648_redo III 12239827 1 G A 151 4.94 63 62 0 16 16 @aaAAaAaaaaAAAaaa point 0 nongenic,nongenic,nongenic 421 downstream,457 downstream,728 downstream {Y75B8A.22.1},{Y75B8A.22.2},{Y75B8A.21} 160831 CB6648_redo III 12337673 311 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered,uncovered non-exonic, 2036 to 2347 bp into,non-exonic, 884 to 1195 bp into,non-exonic, 886 to 1197 bp into {Y75B8A.35a.1},{Y75B8A.35a.3,Y75B8A.35b},{Y75B8A.35a.2} 1963 CB6648_redo III 12405696 1 T C 61 1.00 63 8 1 11 12 @.ccccccccccc point 0 silent GGA->GGG[Gly->Gly] {Y49E10.11a,Y49E10.11b,Y49E10.11c} 1964 CB6648_redo III 12511900 1 A G 29 3.44 19 28 0 11 11 @GGGGGGGGGGG point 0 ncRNA none {Y111B2A.5b} 1965 CB6648_redo III 12573264 1 G C 225 1.44 63 62 0 14 14 @CCCCCCCCCCCCcc point 0 SNP none {haw49035} 1966 CB6648_redo III 12583126 1 A G 255 1.00 63 62 0 20 20 @gGGGgGGgGGGggGGggGgg point 0 SNP none {haw49061} 1967 CB6648_redo III 12589042 1 T C 255 1.00 63 62 0 42 42 @cCCCCcccccccccCccCcCcCCccCccCCccccCCcCcCcC point 0 nongenic -13793 upstream {Y111B2A.9a} 1968 CB6648_redo III 12596781 1 T A 255 1.25 63 62 0 22 22 @AaaaAaaAaAAaAAAAAAAAAA point 0 nongenic,nongenic,nongenic,nongenic -21532 upstream,755 into,843 into,880 into {Y111B2A.9a},{Y111B2A.10a,Y111B2A.10b.3},{Y111B2A.10b.2},{Y111B2A.10b.1} 1969 CB6648_redo III 12603549 1 G T 53 1.75 63 32 0 4 4 @TTTT point 0 nongenic,nongenic,nongenic -5056 upstream,-5621 upstream,4364 into {Y111B2A.10b.1},{Y111B2A.12},{Y111B2A.11} 1973 CB6648_redo III 12636079 1 T C 255 1.00 63 62 0 14 14 @CCcCCCCcccCcCc point 0 nongenic,nongenic 9623 into,9628 into {Y111B2A.14.2},{Y111B2A.14.1} 1974 CB6648_redo III 12672105 1 G A 77 1.00 63 6 3 6 9 @.,.aaAaaa point 0 nongenic,nongenic,nongenic -1453 upstream,-9953 upstream,830 into {Y111B2A.17},{Y111B2A.15},{Y111B2A.16} 1975 CB6648_redo III 12679326 1 G A 136 2.00 63 62 0 16 16 @aaaaaaaaaaaaaaaa point 0 nongenic,nongenic -6020 upstream,5768 into {Y111B2A.16},{Y111B2A.17} 1976 CB6648_redo III 12679350 1 A T 204 1.62 63 62 0 11 11 @ttttttttttt point 0 nongenic,nongenic -6044 upstream,5792 into {Y111B2A.16},{Y111B2A.17} 1977 CB6648_redo III 12679354 1 G T 207 1.62 63 62 0 11 11 @ttttttttttt point 0 nongenic,nongenic -6048 upstream,5796 into {Y111B2A.16},{Y111B2A.17} 1978 CB6648_redo III 12679386 1 A G 109 1.00 63 62 0 4 4 @gggg point 0 nongenic,nongenic -6080 upstream,5828 into {Y111B2A.16},{Y111B2A.17} 1979 CB6648_redo III 12683449 1 A C 255 1.00 63 62 0 52 52 @ccccccCCCcCCccccCcccCCcCcCcCcCCccCcCCCCcCCCCCCcccCCc point 0 SNP none {haw49231} 1980 CB6648_redo III 12705127 1 T A 27 1.81 63 0 0 5 5 @AaaAA point 0 nongenic,nongenic -6314 upstream,5316 into {Y111B2A.20},{Y111B2A.24} 1987 CB6648_redo III 12725512 1 A T 255 1.19 63 62 0 17 17 @TtTtTttTTTtTTTTtt point 0 nongenic,nongenic -20820 upstream,11065 into {Y111B2A.21},{Y111B2A.22} 1988 CB6648_redo III 12953211 1 T G 255 1.00 63 62 0 30 30 @GGGggGgggGggggggggggGggggggggg point 0 missense,SNP AAT->ACT[Asn->Thr],none {Y39E4A.2a,Y39E4A.2b},{snp_Y39E4A[3]} 1996 CB6648_redo III 13032359 1 T C 59 1.69 63 14 3 3 6 @.C,,Cc point 0 nongenic,nongenic,nongenic -2812 upstream,-7622 upstream,1558 into {F14F7.4},{F54F12.2a},{F14F7.5} 1997 CB6648_redo III 13032361 1 T C 19 8.88 63 58 0 8 8 @cCCCAcCc point 0 nongenic,nongenic,nongenic -2814 upstream,-7620 upstream,1560 into {F14F7.4},{F54F12.2a},{F14F7.5} 2000 CB6648_redo III 13032431 1 T C 88 2.00 63 62 0 7 7 @CcCCCcC point 0 nongenic,nongenic,nongenic -2884 upstream,-7550 upstream,1630 into {F14F7.4},{F54F12.2a},{F14F7.5} 2001 CB6648_redo III 13032541 1 G C 123 1.19 63 62 0 13 13 @CCCCCcCCCcccC point 0 nongenic,nongenic,nongenic -2994 upstream,-7440 upstream,1740 into {F14F7.4},{F54F12.2a},{F14F7.5} 2002 CB6648_redo III 13032550 1 T C 60 1.31 63 40 1 7 8 @cCCCcc.C point 0 nongenic,nongenic,nongenic -3003 upstream,-7431 upstream,1749 into {F14F7.4},{F54F12.2a},{F14F7.5} 2004 CB6648_redo III 13155781 1 G A 255 1.00 63 62 0 26 26 @AAaAaaAAAAaAAAaAAaAaAaAAaa point 0 SNP none {haw49837} 2005 CB6648_redo III 13202983 1 G T 255 5.31 63 62 0 19 19 @TTTTTtttttttTTtTttt point 0 nongenic,nongenic,nongenic,nongenic -1880 upstream,1788 into,1790 into,1794 into {Y39E4B.11},{Y39E4B.12b},{Y39E4B.12a.1,Y39E4B.12a.2},{Y39E4B.12c} 2006 CB6648_redo III 13264546 1 C A 255 1.25 63 62 0 21 21 @aaaAAAaAAaAAAAAAAAAAA point 0 nongenic,nongenic -1206 upstream,307 into {F56A8.5},{F56A8.4} 2007 CB6648_redo III 13264548 1 T A 255 1.12 63 62 0 20 20 @aAAAaAAaAAAAAAAAAAAA point 0 nongenic,nongenic -1204 upstream,305 into {F56A8.5},{F56A8.4} 2008 CB6648_redo III 13265024 1 A T 255 1.00 63 62 0 35 35 @ttTTtTTTTTTTTTtTTTTTTTttTTtTTtTTTtT point 0 nongenic,nongenic -728 upstream,171 downstream {F56A8.5},{F56A8.4} 2009 CB6648_redo III 13281779 1 A G 255 1.00 63 62 0 36 36 @GggggGggggggGgGgGggGgGgGGGGGGGGgGgGg point 0 SNP none {haw49884} 2013 CB6648_redo III 13533517 1 A G 3 5.38 0 20 6 17 23 @.GG.GGGGGGGG.G.G.GGG.GG point 0 nongenic,nongenic -9541 upstream,6198 into {Y76A2B.1},{Y76A2B.2} 2014 CB6648_redo III 13536222 1 T A 142 1.00 63 46 1 6 7 @AaAaAA. point 0 nongenic,nongenic -12246 upstream,3613 into {Y76A2B.1},{Y76A2B.2} 2015 CB6648_redo III 13536225 1 T C 46 1.00 63 62 2 4 6 @,,cccc point 0 nongenic,nongenic -12249 upstream,3610 into {Y76A2B.1},{Y76A2B.2} 2016 CB6648_redo III 13536226 1 C A 107 1.00 63 46 0 6 6 @TTaaaa point 0 nongenic,nongenic -12250 upstream,3609 into {Y76A2B.1},{Y76A2B.2} 2034 CB6648_redo III 13750753 1 T C 255 5.38 63 62 0 21 21 @cCcccCcccCCcCcCcccccC point 0 nongenic,nongenic -1597 upstream,-2184 upstream {K08E3.10},{K08E3.2} 2037 CB6648_redo IV 149978 1 A G 255 1.00 63 62 0 42 42 @GgGGgGGgggGgGgggGgGGGgggGGgGGGGGGgGggGgggG point 0 SNP none {haw50079} 2041 CB6648_redo IV 495583 1 T G 255 1.00 63 62 0 34 34 @GGgGggGGgGGgGGGgGggggGggGGgGggGggG point 0 SNP none {haw50110} 4465 CB6648_redo IV 659197 0 X X -1000 -999.99 -1000 -1000 3 1 4 @,,.aa indel 2 nongenic,nongenic,nongenic -6326 upstream,601 downstream,609 downstream {K11H12.7.1},{K11H12.8b},{K11H12.8a} 2044 CB6648_redo IV 743294 1 A G 255 1.00 63 62 0 33 33 @GGGggGGGggggggggGGgGGGgGggGggGgGg point 0 nongenic,nongenic -6572 upstream,1212 into {Y55F3C.3b},{Y55F3C.3a} 2045 CB6648_redo IV 757658 1 T A 255 1.00 63 62 1 50 51 @AAaAAAaaAaaaaaAAaAAAaacaaaAa.AaAaaaAAaaaaaAaaaAAAaa point 0 missense TTC->TAC[Phe->Tyr] {Y55F3C.2} 2046 CB6648_redo IV 807998 1 T C 255 1.00 63 62 0 65 65 @CCCCCCCCCCccCcCCCcCCCCccccccCcccCCcccCCcCccccCCcccccCcCCcCCCCcccc point 0 SNP none {haw50174} 2047 CB6648_redo IV 976182 1 T C 255 1.00 63 62 0 27 27 @CCCcCCcCcccccCCcCcccCcCCCCC point 0 SNP none {haw50433} 2048 CB6648_redo IV 976984 1 A G 255 1.00 63 62 0 18 18 @gGgGgGgggggGgggGGG point 0 SNP none {haw50435} 2049 CB6648_redo IV 991371 1 G C 255 1.06 63 62 0 36 36 @cccccccccccCcccccCCccccccCcCCCCcCCCC point 0 nongenic,nongenic -917 upstream,-931 upstream {Y55F3AM.6a,Y55F3AM.6b},{Y55F3AM.7} 2063 CB6648_redo IV 1197597 1 G T 255 1.00 63 62 0 88 88 @TTTTTtttTTTTTTtTttTtttttTtTTTtTTTTTtTTTTTttTTtTTttTTttTTtTTTTtTTTTtTTTTTttTTtTttTtttTTTt point 0 SNP none {haw50776} 2070 CB6648_redo IV 1386027 1 A G 255 1.00 63 62 0 34 34 @ggGGggGgggGggggGggGGGgGGgGGGgGGGGG point 0 nongenic,nongenic -134 upstream,-9464 upstream {Y104H12A.1},{F58F6.3} 2071 CB6648_redo IV 1438459 1 A T 255 1.00 63 62 0 30 30 @ttTTtttTTttTtTtTtttTTttTTttttt point 0 missense TCC->ACC[Ser->Thr] {Y77E11A.11.1,Y77E11A.11.2} 2084 CB6648_redo IV 1695528 1 G C 255 1.00 63 62 0 42 42 @cCCcccccCCCCCCCcCcCCcCccCccCCCCCCcCCcccCCc point 0 nongenic,nongenic -13370 upstream,-4368 upstream {Y41D4B.24},{K08D12.5} 4470 CB6648_redo IV 1726632 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @,,,.TTtT indel 0 nongenic -2490 upstream {K08D12.7} 2085 CB6648_redo IV 1812233 1 A G 99 7.56 63 62 0 35 35 @ggggGgGggggGgggggggGGGgggGGgggggggg point 0 nongenic,nongenic -8252 upstream,2865 into {Y38C1BA.1},{Y38C1BA.2a,Y38C1BA.2b} 160836 CB6648_redo IV 1823720 1264 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered 806 bp upstream to codon 36 (10 % of 349 codons) {K07A9.2} 2092 CB6648_redo IV 1907215 1 T C 85 1.00 63 42 0 4 4 @CCCC point 0 nongenic,nongenic -6237 upstream,4894 into {F55A8.1.2},{F55A8.1.1} 2093 CB6648_redo IV 1907218 1 T C 42 1.00 63 30 0 4 4 @CCCC point 0 nongenic,nongenic -6234 upstream,4897 into {F55A8.1.2},{F55A8.1.1} 2094 CB6648_redo IV 1917013 1 A C 255 1.00 63 62 0 15 15 @CccCCCCccCCCCcc point 0 SNP none {haw51958} 160837 CB6648_redo IV 1932355 214 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 8785 to 8999 bp into {F52C12.4} 160838 CB6648_redo IV 1951226 57 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3029 to 3086 bp into {F52C12.3} 2106 CB6648_redo IV 1971408 1 A G 82 1.00 63 62 3 7 10 @ggggggg,,, point 0 nongenic,nongenic -2296 upstream,640 into {Y76B12C.3},{Y76B12C.4} 2107 CB6648_redo IV 2022963 1 C T 10 1.00 63 20 2 3 5 @ttt,, point 0 nongenic 10029 into {Y76B12C.7} 2108 CB6648_redo IV 2024663 1 C T 61 1.69 63 4 2 2 4 @tt,. point 0 nongenic 8329 into {Y76B12C.7} 2109 CB6648_redo IV 2024665 1 A C 4 1.69 63 6 0 4 4 @cCtt point 0 nongenic 8327 into {Y76B12C.7} 2110 CB6648_redo IV 2024666 1 T C 7 1.50 63 4 0 4 4 @Accc point 0 nongenic 8326 into {Y76B12C.7} 2111 CB6648_redo IV 2024667 1 C G 28 1.50 63 4 0 8 8 @TgggGGGG point 0 nongenic 8325 into {Y76B12C.7} 2112 CB6648_redo IV 2024668 1 G A 28 1.50 63 4 0 8 8 @CaaaAAAA point 0 nongenic 8324 into {Y76B12C.7} 2114 CB6648_redo IV 2106939 1 A C 35 1.19 63 62 3 8 11 @G.CCCCcC,,g point 0 nongenic,nongenic -7049 upstream,2885 into {C23H5.11},{C23H5.7} 2115 CB6648_redo IV 2130505 1 A T 255 1.00 63 62 0 55 55 @TtttTTttTTttTttttTtTTttTTtttTtTtttttttttTtTTttttttttTtT point 0 SNP none {haw52294} 2116 CB6648_redo IV 2226862 1 T C 255 1.69 63 62 0 22 22 @CCCCCccccCcCCCCcCCCcCc point 0 nongenic,nongenic 4034 into,4036 into {T04C4.1a,T04C4.1b.2},{T04C4.1b.1} 2119 CB6648_redo IV 2357212 1 G T 255 1.00 63 62 0 40 40 @TtTCTttTTttTtTTtttttttTtTtttttttTttttTTt point 0 SNP none {haw52736} 2120 CB6648_redo IV 2359440 1 A G 255 1.00 63 62 0 23 23 @ggGggGGgGGGggggggGGGGgg point 0 SNP none {haw52752} 2124 CB6648_redo IV 2365373 1 T A 66 1.19 63 62 10 15 25 @,.,.,.,,,,AAAAaAAAaAAaaAA point 0 nongenic,nongenic -13089 upstream,6444 into {Y38F2AR.13},{Y38F2AR.5} 2125 CB6648_redo IV 2365375 1 A T 188 1.19 63 62 7 20 27 @,.,.,,T,TTTTtTTTtTTttTTTTTT point 0 nongenic,nongenic -13087 upstream,6446 into {Y38F2AR.13},{Y38F2AR.5} 2126 CB6648_redo IV 2373373 1 T C 255 2.50 63 62 0 30 30 @cCccCCCCccCcCcCcccCcCCccCCcCCC point 0 nongenic,nongenic -5089 upstream,2742 into {Y38F2AR.13},{Y38F2AR.5} 2129 CB6648_redo IV 2502956 1 A G 183 2.56 63 62 0 26 26 @ggGgGGggGgGgGGGggGgGgGGGgg point 0 nongenic,nongenic -1368 upstream,905 downstream {Y69A2AR.16},{Y69A2AR.17} 2131 CB6648_redo IV 2519843 1 T A 114 1.00 63 62 0 4 4 @AAaa point 0 nongenic,nongenic,nongenic -11931 upstream,-22479 upstream,10444 into {Y69A2AR.22},{Y69A2AR.15},{Y69A2AR.16} 2132 CB6648_redo IV 2519844 1 T A 108 1.00 63 62 0 4 4 @AAaa point 0 nongenic,nongenic,nongenic -11932 upstream,-22478 upstream,10443 into {Y69A2AR.22},{Y69A2AR.15},{Y69A2AR.16} 2133 CB6648_redo IV 2544993 1 A T 255 1.00 63 62 0 22 22 @TtTTtTtTTtttTtTTTTTtTT point 0 nongenic 2671 into {Y69A2AR.15} 2136 CB6648_redo IV 2629533 1 T G 12 1.00 63 56 1 5 6 @GGGGG, point 0 nongenic -1305 upstream {Y69A2AR.29} 2138 CB6648_redo IV 2905125 1 A G 89 4.19 63 62 0 6 6 @GgGGgg point 0 nongenic,nongenic -13604 upstream,2782 into {Y54G2A.50},{Y54G2A.21} 2139 CB6648_redo IV 2999123 1 A G 255 1.00 63 62 0 17 17 @GGGGggGGGGggGGggG point 0 silent CCT->CCC[Pro->Pro] {Y54G2A.27} 2142 CB6648_redo IV 3206809 1 G A 31 7.81 36 16 0 6 6 @AAAaAa point 0 nongenic,nongenic -6958 upstream,2256 into {M4.1},{M4.2} 2150 CB6648_redo IV 3372547 1 A T 255 1.00 63 62 0 33 33 @TtTtTtTtttTTTtTTTTTtTTTTTTTTttTtt point 0 silent GTA->GTT[Val->Val] {Y55H10A.1} 2151 CB6648_redo IV 3525903 1 T A 255 1.00 63 62 0 28 28 @aaaaaaaaaaaaaaaaaaAaaAAaaaaa point 0 three_prime_UTR none {Y37E11C.1} 2152 CB6648_redo IV 3679598 1 A G 18 1.00 63 62 5 6 11 @,.,.,gggggg point 0 nongenic -10899 upstream {Y37E11AL.6} 2154 CB6648_redo IV 3824608 1 C A 44 1.00 63 20 5 9 14 @,.,,,aaAaAaAaa point 0 nongenic,nongenic -2258 upstream,-5289 upstream {F28F9.3},{M02B7.5} 2160 CB6648_redo IV 4166340 1 A T 255 1.06 63 62 0 45 45 @tTtTtTTtTTTttttttttttTTtTtTTTttttTtttttTtTttT point 0 nongenic,nongenic -1690 upstream,170 downstream {K08D10.5},{K08D10.7.1,K08D10.7.2} 2170 CB6648_redo IV 4821642 1 A G 11 1.00 63 62 4 7 11 @,..,ggGggGg point 0 nongenic,nongenic -520 upstream,-577 upstream {H06H21.8a},{H06H21.8b} 2176 CB6648_redo IV 4931163 1 A C 255 1.00 63 62 0 47 47 @cccCCCCCCCCCccCcCcCCCcCCCCccccccccccCcCccccCcCC point 0 missense,SNP AAC->CAC[Asn->His],none {Y9C9A.8},{haw56120,snp_Y9C9A[1]} 2177 CB6648_redo IV 4972666 1 C T 255 1.00 63 62 0 48 48 @TttTtttTtTTTttTttttTtTtttTtttTttttttTtttttttTttt point 0 missense,SNP GTT->ATT[Val->Ile],none {Y9C9A.15},{haw56128} 2179 CB6648_redo IV 5308471 1 A C 255 1.00 63 62 0 40 40 @CcCcCcCCCcCCCccCcCcCCcCCCCcCCCcCCCCccCCc point 0 nongenic,nongenic -1751 upstream,-99 upstream {ZK354.3},{ZK354.9} 2180 CB6648_redo IV 5426794 1 G T 255 1.00 63 62 0 40 40 @ttTTtttTTtttTTTTtTTTttttttTTttTttttTTttt point 0 SNP none {haw56297} 2184 CB6648_redo IV 5609149 1 T A 31 1.00 63 62 5 6 11 @AAaaAA,.... point 0 nongenic,nongenic,nongenic,nongenic -244 upstream,-35052 upstream,1201 into,466 into {F26D12.1d},{T12E12.6},{F26D12.1a},{F26D12.1b,F26D12.1c} 4490 CB6648_redo IV 5706864 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @,,....gg indel 2 nongenic,nongenic -217 upstream,-3410 upstream {C55C3.2},{C55C3.5} 2189 CB6648_redo IV 6359838 1 A G 36 9.44 63 62 27 42 69 @,gGG,.GGGGgGG.GG,GG..GGG,G.GGGGG,,GGgGGG.,gG,.G,GG.g,Gg,g.g,gg,G,,,.. point 0 nongenic,nongenic -12374 upstream,-2201 upstream {Y73B6BL.16},{Y73B6BL.47} 2190 CB6648_redo IV 6359857 1 A C 14 9.50 40 36 18 23 41 @Cc,cCCcC,CCcc,Cc,ccc,cc,C,,,cgg,,,,,,,.g, point 0 nongenic,nongenic -12393 upstream,-2182 upstream {Y73B6BL.16},{Y73B6BL.47} 2205 CB6648_redo IV 7053273 1 C T 36 1.00 63 20 0 4 4 @TttT point 0 missense CCT->CTT[Pro->Leu] {C06G3.1a.1,C06G3.1a.2,C06G3.1b} 2209 CB6648_redo IV 7056612 1 A G 255 1.00 63 62 0 36 36 @GggGGGgGGGGGgggGGGgGGgGGgGGgGgGGgggG point 0 SNP none {haw57660} 2210 CB6648_redo IV 7066275 1 T C 4 1.00 63 2 3 7 10 @,CCCCCc,,c point 0 nongenic,nongenic -6118 upstream,896 into {Y43B11AR.5},{Y43B11AL.1} 2215 CB6648_redo IV 7226681 1 C T 18 1.00 63 62 1 4 5 @.tttt point 0 nongenic,nongenic,nongenic -74 upstream,585 downstream,586 downstream {R13A1.10},{D2024.5b.1},{D2024.5a.1} 2216 CB6648_redo IV 7278032 1 C G 146 1.12 63 62 0 7 7 @ggGGGGG point 0 nongenic,nongenic -14811 upstream,-4243 upstream {C06E4.7},{C06E4.2} 2217 CB6648_redo IV 7527069 1 T G 255 1.00 63 62 0 41 41 @ggGGGgGGgGGGgGGGGgGGgGgggGgGGggGGGGGgGgGG point 0 SNP none {haw57987} 2218 CB6648_redo IV 7591627 1 A C 144 9.56 63 62 4 23 27 @CccCcCCcCcccCcccccc,,,cccc, point 0 missense GAA->GAC[Glu->Asp] {Y2C2A.1} 2224 CB6648_redo IV 7596465 1 T A 15 1.00 0 14 0 7 7 @aaaaaaa point 0 nongenic,nongenic -9999 upstream,5921 into {F45E4.4},{Y2C2A.1} 2225 CB6648_redo IV 7596476 1 G T 13 1.00 0 6 0 5 5 @ttttt point 0 nongenic,nongenic -9988 upstream,5932 into {F45E4.4},{Y2C2A.1} 2226 CB6648_redo IV 7596529 1 G C 3 1.00 0 16 1 11 12 @ccccccccccc. point 0 nongenic,nongenic -9935 upstream,5985 into {F45E4.4},{Y2C2A.1} 2227 CB6648_redo IV 7596545 1 T A 39 1.00 32 38 0 13 13 @aaaaaaaaaaaaa point 0 nongenic,nongenic -9919 upstream,6001 into {F45E4.4},{Y2C2A.1} 2228 CB6648_redo IV 7596564 1 G T 40 1.00 32 38 0 4 4 @tttt point 0 nongenic,nongenic -9900 upstream,6020 into {F45E4.4},{Y2C2A.1} 160842 CB6648_redo IV 7596582 50 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 6037 to 6087 bp into {Y2C2A.1} 2230 CB6648_redo IV 7597178 1 T A 21 3.25 0 20 0 9 9 @AAaAAaAAA point 0 nongenic,nongenic -9286 upstream,6634 into {F45E4.4},{Y2C2A.1} 160843 CB6648_redo IV 7598923 68 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered codon 2626 to codon 2630 (0 % of 4901 codons) {Y2C2A.1} 2245 CB6648_redo IV 7600485 1 A T 255 1.00 63 62 0 44 44 @TtttTTtTTTTTtttTTTttTTtTTTtTTttttttttttttTTt point 0 missense,SNP CAA->CAT[Gln->His],none {Y2C2A.1},{haw58035} 2246 CB6648_redo IV 7607350 1 A G 255 2.88 63 62 0 25 25 @gGGgggGGGGGggGGGGGgGGGgGG point 0 nongenic,nongenic -12263 upstream,886 into {F45E4.3b.1},{F45E4.4} 2247 CB6648_redo IV 7607351 1 A G 255 2.88 63 62 0 25 25 @gGGgggGGGGGggGGGGGgGGGgGG point 0 nongenic,nongenic -12262 upstream,887 into {F45E4.3b.1},{F45E4.4} 2248 CB6648_redo IV 7607353 1 A G 255 2.88 63 62 0 24 24 @GGgggGGGGGggGGGGGgGGGgGG point 0 nongenic,nongenic -12260 upstream,889 into {F45E4.3b.1},{F45E4.4} 2249 CB6648_redo IV 7703023 1 G C 16 3.00 0 16 0 5 5 @CCCcc point 0 nongenic,nongenic -4670 upstream,848 downstream {F33D4.3},{F33D4.4.1} 2251 CB6648_redo IV 8012779 1 C A 208 1.00 63 62 0 8 8 @AAAaaaaa point 0 nongenic,nongenic -1330 upstream,-366 upstream {C26B2.8},{Y42H9B.3} 2252 CB6648_redo IV 8015831 1 G C 206 9.56 63 62 0 12 12 @cccccccccccc point 0 nongenic,nongenic -363 upstream,211 downstream {C26B2.7},{C26B2.8} 4498 CB6648_redo IV 8061990 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @,,.,,Cc indel 0 nongenic -660 upstream {C18F3.2b,C18F3.2c} 4499 CB6648_redo IV 8087154 0 X X -1000 -999.99 -1000 -1000 5 0 5 @.,.,.AAa indel 0 nongenic,nongenic -12745 upstream,-520 upstream {Y42H9AR.2},{C18F3.4} 2259 CB6648_redo IV 8468403 1 C T 255 5.56 63 62 0 22 22 @TtTTTTttttttTtTTtTtttT point 0 nongenic,nongenic,nongenic,nongenic -5677 upstream,-8143 upstream,3570 into,3654 into {C28C12.11b},{T01B11.4},{T01B11.7.2},{T01B11.7.1} 2283 CB6648_redo IV 8575147 1 A C 14 6.62 0 2 0 103 103 @CCCCCccCCCcCCCCcCCCCccCcCCCCCCCCCCCcCCccCccCCCcccccccCcCCCccccCCccCCccCcCCCcCcCCCcccCCccCcccccccccc point 0 nongenic -10376 upstream {Y59H11AR.2a.2} 2302 CB6648_redo IV 8602902 1 C A 255 1.00 63 62 0 40 40 @aaaAAaaaAaaAaaaaaAaaaaaAaAAaaAaaAAAaaaaA point 0 SNP none {haw58423} 2303 CB6648_redo IV 8602934 1 C A 255 1.00 63 62 0 37 37 @AAaaAaaAAAaaaaAaaAAaaAaAAaaAAAAaaAAaa point 0 SNP none {haw58424} 2304 CB6648_redo IV 8719811 1 A G 14 1.00 63 62 5 9 14 @GGGG,GGGg,,g,, point 0 nongenic,nongenic -4188 upstream,580 into {F21D5.9.1},{H23L24.1} 2305 CB6648_redo IV 9038439 1 G A 255 1.00 63 62 0 32 32 @AAaAaAaaAAAaaaaaaaAAaAAaAaaaAAaA point 0 SNP none {haw58542} 2310 CB6648_redo IV 9048306 1 A G 255 6.12 63 62 32 223 255 @GGGGGGGGGGGGGGgggggggggggGGGGGGGGGGGGGGggGGGGGGGGGGGGGGGGGggggGGGGGGGGGGGGGGGGGGGGGGgggggggGGGGGGGG point 0 SNP none {haw58549} 2312 CB6648_redo IV 9048807 1 C G 255 1.00 63 62 0 17 17 @gggGGGGgGgGGgggGg point 0 nongenic,nongenic -21182 upstream,-3474 upstream {ZC410.1a},{Y73F4A.1} 2313 CB6648_redo IV 9048812 1 T A 255 1.00 63 62 0 17 17 @AAAAaAaAAaaaAaAaa point 0 nongenic,nongenic -21177 upstream,-3479 upstream {ZC410.1a},{Y73F4A.1} 2318 CB6648_redo IV 9155021 1 A T 94 1.00 63 62 0 9 9 @ttttTtttt point 0 SNP none {haw58572} 4507 CB6648_redo IV 9195667 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @,.,cCc indel 0 inframe none {C46C2.7} 2319 CB6648_redo IV 9251676 1 C T 13 1.00 63 42 6 8 14 @,,..,.tTtTtttt point 0 nongenic,nongenic 350 into,836 downstream {Y11D7A.8},{Y11D7A.7} 2320 CB6648_redo IV 9269038 1 T C 255 1.00 63 62 0 40 40 @CCCCCccccCCcCccCcCCccCcccCCCCCcCCcccCcCC point 0 nongenic,nongenic -1035 upstream,-2498 upstream {Y11D7A.13},{Y11D7A.19} 2321 CB6648_redo IV 9370614 1 T G 97 1.00 63 62 5 10 15 @..,,,gGggggGGgg point 0 nongenic,nongenic -4130 upstream,-870 upstream {C10C5.1},{C10C5.2} 2327 CB6648_redo IV 9538140 1 G A 68 1.00 63 62 1 4 5 @.AAAA point 0 nongenic,nongenic -2642 upstream,-5021 upstream {F56H11.1a.1},{F56H11.2a} 4509 CB6648_redo IV 9715774 2 X X -1000 -999.99 -1000 -1000 9 -6 3 @,.,,..... indel -2 SNP none {uCE4-1082} 2328 CB6648_redo IV 9745669 1 G A 255 1.44 63 62 0 33 33 @aaAAaaaaAAAAAaAaAaaaaAAaaaaaaaaaA point 0 missense CAC->TAC[His->Tyr] {C28D4.5} 4510 CB6648_redo IV 9755286 0 X X -1000 -999.99 -1000 -1000 2 0 2 @.,Tt indel 0 nongenic,nongenic -2336 upstream,-6868 upstream {H27C11.1a,H27C11.1b.2},{C28D4.8} 2329 CB6648_redo IV 9764971 1 G T 13 1.62 63 0 0 8 8 @TtTtttCc point 0 nongenic,nongenic 506 downstream,676 downstream {H27C11.1a},{T13F2.12} 4512 CB6648_redo IV 9840851 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,.CCc indel 0 five_prime_UTR,inframe none,none {K07F5.4b},{K07F5.4a} 4514 CB6648_redo IV 10112497 3 X X -1000 -999.99 -1000 -1000 2 0 2 @,. indel -3 SNP none {uCE4-1092} 4515 CB6648_redo IV 10329614 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,,TTt indel 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -1243 downstream,-137 downstream,-1501 downstream,-1519 downstream,-1942 downstream,-2186 downstream,-462 downstream,-4647 downstream,-5373 downstream,-557 downstream,-8490 upstream {K11E8.1i.1},{K11E8.1n},{K11E8.1m},{K11E8.1o},{K11E8.1k.2},{K11E8.1a},{K11E8.1l.2},{K11E8.1c.1,K11E8.1c.2,K11E8.1d.2,K11E8.1e.1,K11E8.1e.2,K11E8.1f.1,K11E8.1f.2,K11E8.1g.1,K11E8.1g.2,K11E8.1h.1,K11E8.1h.2,K11E8.1p},{K11E8.1d.1,K11E8.1k.1,K11E8.1l.1},{K11E8.1i.2},{R09E10.1.2} 2334 CB6648_redo IV 10409487 1 C A 24 1.00 63 62 4 5 9 @,.,.AaaaA point 0 nongenic,nongenic,nongenic -37 upstream,470 downstream,542 downstream {R10H10.6},{R10H10.7.1},{R10H10.7.2} 2335 CB6648_redo IV 10425373 1 T G 118 1.00 63 50 0 6 6 @Gggggg point 0 nongenic,nongenic,nongenic -763 upstream,-765 upstream,837 downstream {F13B12.1.1},{F13B12.1.2},{F13B12.2} 2336 CB6648_redo IV 10425374 1 G T 64 1.00 63 50 3 4 7 @tttt.,. point 0 nongenic,nongenic,nongenic -764 upstream,-766 upstream,836 downstream {F13B12.1.1},{F13B12.1.2},{F13B12.2} 2337 CB6648_redo IV 10848627 1 T C 45 1.44 63 32 3 4 7 @,,,cccc point 0 nongenic -3735 upstream {T11G6.7} 2338 CB6648_redo IV 10878679 1 G A 255 1.00 63 62 0 43 43 @AAAAaaaaaAAAaaaaAAAAAaAAaaaAaAAaaAAaAAAAAAA point 0 missense,SNP CGT->TGT[Arg->Cys],none {F13E9.6},{haw59179} 2344 CB6648_redo IV 10950263 1 A C 72 1.31 63 62 37 70 107 @.CC.CCCcCcc,Cc,CCc..,C..C,,C,CCCcc.c,CC,c,,cc,ccc,cCcccCcc,CCccC,,,CC,CCC,c,C..cCcc..cCC,cCc.,.cCcC point 0 missense,SNP AAG->ACG[Lys->Thr],none {Y69E1A.2},{uCE4-1129} 2345 CB6648_redo IV 10950264 1 G A 72 1.31 63 62 37 71 108 @AA.AAAaAaa,Aa,AAa..,A..A,,A,AAAaa.a,AA,a,,aa,aaa,aAaaaAaa,AAaaA,,,AA,AAA,a,A..aAaa..aAA,aAa.,.aAaAa point 0 silent,SNP AAG->AAA[Lys->Lys],none {Y69E1A.2},{uCE4-1130} 2346 CB6648_redo IV 10950402 1 G A 21 1.00 63 62 48 62 110 @,,,aaaaaaaa.A,A,aaAa...c.AAAa,AA,aAA,,,aA,.,,,.,,,AA,a.a.Aa,,.aa.aA,AAAAA,a.A,a,.aaA,,aAaA,Aa,,,aaA point 0 silent,SNP GGG->GGA[Gly->Gly],none {Y69E1A.2},{uCE4-1131} 2347 CB6648_redo IV 10984634 1 T C 99 1.00 63 62 20 27 47 @CcCcC,CcCC,C,C,,cC,c,c,,,C,,c,ccCC,CCC..cc,.,,c point 0 three_prime_UTR none {Y43E12A.2} 2348 CB6648_redo IV 10997631 1 A G 11 8.31 63 22 1 3 4 @,ggg point 0 nongenic -4457 upstream {F13H10.9} 2350 CB6648_redo IV 11009137 1 G A 255 1.00 63 62 0 27 27 @aaAaaaAaAAAaaAaaaaaAAaAaAAa point 0 nongenic,nongenic -126 upstream,862 downstream {F13H10.6},{F13H10.2a} 2351 CB6648_redo IV 11071114 1 C T 225 2.88 63 62 687 -432 255 @TTTT,TT,,,TT,TTTTT,T,TTTTt.ttt.TTTTT,T,TTTTTTTT,T,,TTTTTTTTTTT,TTT,Tt.t.ttt..t.tTT,T,,T,TT,TTTT,,,, point 0 nongenic 884 downstream {Y5F2A.3} 2352 CB6648_redo IV 11071123 1 T C 255 1.56 63 62 2 253 255 @CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc point 0 SNP none {haw59203} 2353 CB6648_redo IV 11071124 1 T A 112 1.56 63 62 428 -173 255 @,,,,,,,,,,,,A,,,,,,,,,,A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,.............,,,,,,,,,,,A,,,,,,,,,,,,,,, point 0 nongenic 894 downstream {Y5F2A.3} 4522 CB6648_redo IV 11075254 0 X X -1000 -999.99 -1000 -1000 13 2 15 @,,,C,,,,,,,C,,,ccccc indel 1 nongenic 813 downstream {Y5F2A.4} 4523 CB6648_redo IV 11179024 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @.,,,,aa indel 0 nongenic,nongenic,nongenic,nongenic -457 upstream,-590 upstream,-592 upstream,974 downstream {C08F8.9},{R07H5.2a.1},{R07H5.2a.2,R07H5.2b},{C08F8.7} 2376 CB6648_redo IV 11180495 1 A G 255 1.00 63 62 0 39 39 @gggGggggggggGgGggGggGggggGggGGgGgGGgGgG point 0 missense,SNP ATT->GTT[Ile->Val],none {R07H5.2a.1,R07H5.2a.2,R07H5.2b},{haw59219} 2377 CB6648_redo IV 11226241 1 A C 208 2.19 63 62 0 21 21 @CCcCcCcccCcCCCccccCCc point 0 missense CAA->CCA[Gln->Pro] {C29F4.1} 2378 CB6648_redo IV 11323988 1 C G 45 1.75 63 62 3 6 9 @GGGgGG... point 0 three_prime_UTR none {B0035.7} 2379 CB6648_redo IV 11551952 1 A G 18 1.00 63 62 3 6 9 @GggGgG.,, point 0 nongenic -21 upstream {F12F6.9} 2380 CB6648_redo IV 11581824 1 C A 255 1.00 63 62 0 38 38 @aAAaaAAAaaAAaaaAAaaaaAaAAAaaAaAaAaAAAa point 0 missense GAC->GAA[Asp->Glu] {F12F6.3.1,F12F6.3.2,F12F6.3.3} 2389 CB6648_redo IV 12069459 1 G A 255 1.00 63 62 0 30 30 @aAAAaAaAaaaaaaaaaAaAaaaAaaaaaa point 0 SNP none {haw59564} 2390 CB6648_redo IV 12105545 1 A T 255 1.00 63 62 0 47 47 @TtttTTtttttttTTTTtTTtTtTTtTTTtTTTtttTTTtTTtttTT point 0 three_prime_UTR none {F11A10.4} 2392 CB6648_redo IV 12239969 1 A C 255 1.62 63 62 0 13 13 @CCCCCcccCCCcc point 0 nongenic -1048 upstream {Y39C12A.6} 2393 CB6648_redo IV 12239976 1 C T 184 2.31 63 62 2 7 9 @ttTTTtt., point 0 nongenic -1055 upstream {Y39C12A.6} 2394 CB6648_redo IV 12239978 1 A G 99 2.81 63 62 2 6 8 @GGGggc,, point 0 nongenic -1057 upstream {Y39C12A.6} 2396 CB6648_redo IV 12248644 1 A G 82 3.44 50 62 0 14 14 @ggGgggGgGgggGg point 0 nongenic -3876 upstream {Y39C12A.7} 2410 CB6648_redo IV 12334254 1 C A 255 1.00 63 62 0 37 37 @AAaAaAaaAaaaAaAAaaAAAaAaAaaaaaAAAAAAa point 0 nongenic,nongenic,nongenic -3294 upstream,-3393 upstream,316 into {F19B6.4},{F19B6.2a},{F19B6.1a,F19B6.1b} 2411 CB6648_redo IV 12334255 1 C A 255 1.00 63 62 0 38 38 @AAaAaAaaAaaaAaAAaaAAAaAaAaaaaaAAAAAAaA point 0 nongenic,nongenic,nongenic -3293 upstream,-3394 upstream,315 into {F19B6.4},{F19B6.2a},{F19B6.1a,F19B6.1b} 4529 CB6648_redo IV 12336928 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @,,,..gg indel 0 nongenic,nongenic -2358 upstream,-621 upstream {F19B6.1a,F19B6.1b},{F19B6.4} 2414 CB6648_redo IV 12393525 1 C A 255 1.00 63 62 0 40 40 @AAaAAAaAAAaAAaaAAAaAAAAAAAAAaAaaAaaAaAAA point 0 missense,SNP ATG->ATT[Met->Ile],none {F28D1.9},{haw59770} 2415 CB6648_redo IV 12430402 1 A T 204 9.88 63 62 0 16 16 @tttttttttttttttc point 0 nongenic,nongenic,nongenic,nongenic -1917 upstream,-2205 upstream,2078 into,2091 into {F08G5.4},{F08G5.7},{F08G5.5.2},{F08G5.5.1} 2419 CB6648_redo IV 12430471 1 C G 183 1.81 63 62 0 6 6 @gggggG point 0 nongenic,nongenic,nongenic,nongenic -1986 upstream,-2136 upstream,2009 into,2022 into {F08G5.4},{F08G5.7},{F08G5.5.2},{F08G5.5.1} 2420 CB6648_redo IV 12430475 1 G C 255 2.31 63 62 0 10 10 @cccccCccCC point 0 nongenic,nongenic,nongenic,nongenic -1990 upstream,-2132 upstream,2005 into,2018 into {F08G5.4},{F08G5.7},{F08G5.5.2},{F08G5.5.1} 2421 CB6648_redo IV 12430477 1 A G 255 2.31 63 62 0 10 10 @gggggGggGG point 0 nongenic,nongenic,nongenic,nongenic -1992 upstream,-2130 upstream,2003 into,2016 into {F08G5.4},{F08G5.7},{F08G5.5.2},{F08G5.5.1} 2422 CB6648_redo IV 12430533 1 C T 255 6.19 63 62 0 46 46 @tttttTtttttttTTTTtttTTtTTTttTtTtTTTttttTtttttT point 0 nongenic,nongenic,nongenic,nongenic -2048 upstream,-2074 upstream,1947 into,1960 into {F08G5.4},{F08G5.7},{F08G5.5.2},{F08G5.5.1} 4535 CB6648_redo IV 12544080 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,,,aAa indel 1 nongenic,nongenic,nongenic -12967 upstream,-1614 downstream,-4021 upstream {F53B2.5},{F53B2.6},{ZK795.1} 2425 CB6648_redo IV 12544081 1 A T 5 1.00 63 48 0 5 5 @CCtTt point 0 nongenic,nongenic,nongenic -12968 upstream,-4019 upstream,1613 into {F53B2.5},{ZK795.1},{F53B2.6} 2426 CB6648_redo IV 12545902 1 C T 255 1.00 63 62 0 52 52 @TTttTTtttTTTTTTTTTTtTtTTTtttTttttTttttTtTTttTTtTtTtt point 0 SNP none {haw59832} 2427 CB6648_redo IV 12571922 1 A G 61 1.00 63 62 3 5 8 @,.,GGGGg point 0 nongenic,nongenic -1415 upstream,-731 upstream {K08E7.5c},{K08E7.4} 2428 CB6648_redo IV 12581671 1 C T 255 1.00 63 62 0 35 35 @tTtttttttttTttTtttTTTTttTTtttttTttt point 0 SNP none {haw59843} 2430 CB6648_redo IV 12697437 1 G C 255 1.00 63 62 0 44 44 @ACCCccCCccCCCccCCcCCCCCCCccccCCCCCCcccCCCCCc point 0 SNP none {haw59886} 2431 CB6648_redo IV 12730473 1 A G 203 5.44 63 62 3 9 12 @ggGgggGGG,,, point 0 SNP none {haw59889} 2437 CB6648_redo IV 12781072 1 A C 253 1.00 63 62 0 20 20 @ccCcCcgCCCCCCCCCCgcC point 0 nongenic,nongenic,nongenic -23429 upstream,-7953 upstream,5870 into {C36H8.3.1},{F07C6.3},{ZK897.1} 2439 CB6648_redo IV 12979116 1 T C 255 1.00 63 62 0 46 46 @CcCCCccCcCCCCCccCCCcccCCCccCCCCCCccccCccCCCccC point 0 SNP none {haw60243} 2440 CB6648_redo IV 13092702 1 G C 255 1.00 63 62 0 55 55 @CCCCCcCCcCCCCCCCCCCCcCCCccccCCcaCCCCCcCCCCccCCCCcCCcCcc point 0 nongenic,nongenic,nongenic -1272 upstream,-1666 upstream,1111 into {C39E9.12.1,C39E9.12.2},{C39E9.9},{C39E9.11} 2441 CB6648_redo IV 13127459 1 T C 255 1.00 63 62 0 30 30 @cCCCccCCcccccCccCCcCCCCCcCcCcc point 0 SNP none {haw60403} 2443 CB6648_redo IV 13386538 1 G A 255 1.00 63 62 0 28 28 @aAaAaAAAaAAAaaaAaaAaaAaAaAaA point 0 five_prime_UTR none {Y62E10A.11.1,Y62E10A.11.2,Y62E10A.11.3} 2444 CB6648_redo IV 13451972 1 T C 255 1.00 63 62 0 64 64 @cCcCcCCCCCCCCCCcCCccCcCcccCcCCcCccCcccCcCCCcCccccCcCCccCccCcCccC point 0 SNP none {haw60794} 2446 CB6648_redo IV 13463712 1 G C 18 1.00 63 2 1 9 10 @CCCCCCCCC, point 0 nongenic -2393 upstream {Y38H8A.5} 2447 CB6648_redo IV 13463714 1 G C 3 1.00 63 2 4 7 11 @CCCCC,CC,,, point 0 nongenic -2391 upstream {Y38H8A.5} 2448 CB6648_redo IV 13463717 1 T C 3 1.00 63 0 2 8 10 @CCCCCCC,C, point 0 nongenic -2388 upstream {Y38H8A.5} 2450 CB6648_redo IV 13490388 1 A C 87 1.00 63 62 5 10 15 @.,...cCCCcCCccC point 0 nongenic,nongenic -2149 upstream,12425 into {Y45F10A.7a},{Y45F10A.6a,Y45F10A.6b,Y45F10A.6c} 2451 CB6648_redo IV 13549411 1 T A 176 1.88 63 62 24 231 255 @,..,,.,.,,.,,...,.,,.AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA point 0 nongenic,nongenic,nongenic -1211 upstream,209 downstream,317 downstream {F52G2.3.1},{Y45F10B.13b},{Y45F10B.13a,Y45F10B.13c} 2453 CB6648_redo IV 13563245 1 G C 255 1.00 63 62 0 48 48 @cCCCCCcccCCCCCCcCCCcCCCccCCCCcCcCCccCcccCCccccCc point 0 SNP none {haw60948} 2454 CB6648_redo IV 13563393 1 G T 255 1.00 63 62 0 29 29 @ttTTTtTTttttTTTttTttttttTTTtT point 0 SNP none {haw60949} 2455 CB6648_redo IV 13602476 1 T A 255 1.00 63 62 0 48 48 @AAaaaAAaaAaAAaAAaAaAAaAaAAAAAaaaaaAAaAAAaAAAaAaa point 0 SNP none {haw60978} 2456 CB6648_redo IV 13662115 1 T G 255 1.00 63 62 0 36 36 @ggGGgGgGGgGggGggGggGgggGgGggGGgGgGGG point 0 SNP,three_prime_UTR none,none {haw61075},{Y45F10C.2} 2458 CB6648_redo IV 13695677 1 C G 255 1.00 63 62 0 31 31 @gGGGGGGgGgGggGggGGGgGGGGGgGGGgg point 0 nongenic -6914 upstream {T23G4.2} 2459 CB6648_redo IV 13695678 1 G C 255 1.00 63 62 0 34 34 @CCCCCCcCcCccCccCCCcCCCCCcCCCacCCcc point 0 nongenic -6915 upstream {T23G4.2} 4542 CB6648_redo IV 13791000 0 X X -1000 -999.99 -1000 -1000 10 0 10 @.,,,,,,.,,ttt indel 0 inframe none {Y45F10D.7} 2462 CB6648_redo IV 13791001 1 C G 64 1.00 63 6 5 10 15 @gGGGGGGgGG...,. point 0 missense CCG->CGG[Pro->Arg] {Y45F10D.7} 2463 CB6648_redo IV 13793476 1 A C 255 1.00 63 62 0 20 20 @cCCccCCCCCCCccCCCCcc point 0 nongenic,nongenic -4787 upstream,2715 into {Y45F10D.9},{Y45F10D.7} 2466 CB6648_redo IV 13838595 1 G A 255 1.00 63 62 0 27 27 @AaAAAAaAAaaaaaAAaaaAaaaaaaa point 0 nongenic,nongenic,nongenic,nongenic -15726 upstream,-2237 upstream,6085 into,6351 into {B0513.6},{H08M01.1},{H08M01.2a},{H08M01.2b} 2467 CB6648_redo IV 13910050 1 C T 4 7.88 0 4 5 10 15 @t,tT,tTT,TtT.t. point 0 nongenic,nongenic,nongenic -24361 upstream,-7210 upstream,2215 into {Y37A1A.4},{Y37A1A.3},{Y37A1A.2} 2468 CB6648_redo IV 13923107 1 C A 17 8.19 27 40 3 3 6 @,,A.aa point 0 nongenic,nongenic -10842 upstream,-11304 upstream {Y37A1A.2},{Y37A1A.4} 2479 CB6648_redo IV 14313679 1 T G 127 1.00 63 62 2 6 8 @GggGGG., point 0 nongenic 5851 into {Y64G10A.7} 2480 CB6648_redo IV 14347514 1 C A 255 1.00 63 62 0 51 51 @AAAaAaAaAaaaaaaAaAaaaaaaAaAaaaAAAaaaaAAAaaAaaaAaaAa point 0 SNP none {haw62226} 2482 CB6648_redo IV 14662594 1 T A 63 1.00 63 52 1 3 4 @,AAA point 0 nongenic -1041 upstream {Y57G11C.37} 2483 CB6648_redo IV 14670517 1 T G 55 1.00 63 40 1 3 4 @,GGG point 0 nongenic,nongenic -12488 upstream,4586 into {Y57G11C.31},{Y57G11C.37} 2484 CB6648_redo IV 14691766 1 G A 255 1.00 63 62 0 52 52 @aAaaAaAaAAaAaAaaaaaAAAaaAAaaaAAaAAaaaAaaaaaaaaaaAaAa point 0 SNP none {haw62984} 2485 CB6648_redo IV 14992694 1 G T 255 1.00 63 62 0 33 33 @TTtttTTTTttttTtTTtTTTTtttTTTTttTt point 0 SNP none {haw63537} 2486 CB6648_redo IV 14998777 1 C T 255 1.00 63 62 0 19 19 @tTTTTTTTTttTTTtTTtt point 0 SNP none {haw63554} 2497 CB6648_redo IV 15313323 1 A T 255 1.00 63 62 0 53 53 @TtTTtTttttTttttTtTtttTTCtTTTttttttttttTTTtTttTttTTTtt point 0 SNP none {haw64171} 2500 CB6648_redo IV 15448957 1 A T 157 1.00 63 62 6 14 20 @ttTTtTTtTtTtTt.,.,.. point 0 nongenic,nongenic -4415 upstream,3618 into {Y73F8A.23},{Y73F8A.24} 2503 CB6648_redo IV 15749705 1 A G 255 1.00 63 62 0 37 37 @GGggGgGgGggggGGgggGGGGggggggGgGggGGGG point 0 SNP none {haw64925} 4550 CB6648_redo IV 15798017 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @.,..Gg indel 1 nongenic 64 downstream {Y105C5A.22} 2510 CB6648_redo IV 15798018 1 T G 118 2.19 63 54 0 6 6 @GggGgg point 0 nongenic 62 downstream {Y105C5A.22} 2512 CB6648_redo IV 15871052 1 T G 255 1.00 63 62 0 23 23 @GGGggGGGggGGGGgggggGGgg point 0 missense,SNP TTG->TGG[Leu->Trp],none {Y105C5B.1},{haw65169} 2516 CB6648_redo IV 15925394 1 A T 255 1.00 63 62 0 26 26 @TtTTTtTtTTttTTtttttTTttTtt point 0 SNP none {haw65323} 2517 CB6648_redo IV 15935820 1 T C 255 1.00 63 62 0 52 52 @cccCcccCCCcCcCccCccccccCCCcCCcCCCccCccccCCCcCCCCCCCc point 0 SNP none {haw65337} 4551 CB6648_redo IV 15965558 2 X X -1000 -999.99 -1000 -1000 8 -7 1 @...,.... indel -2 frameshift,SNP none,none {Y105C5B.18},{uCE4-1508} 2518 CB6648_redo IV 16085619 1 C A 255 1.00 63 62 1 23 24 @AAaAaaaaaAAAAAaA.AaaaaAA point 0 SNP none {haw65640} 2520 CB6648_redo IV 16095879 1 T G 3 8.12 63 4 3 4 7 @GG.G,G. point 0 nongenic -36578 upstream {Y105C5B.29} 2521 CB6648_redo IV 16199503 1 T C 255 1.00 63 62 0 50 50 @cCcCcccCCCCccCCcCCCcCcCccCCCCcCCCccCCccccCCCCCCCcc point 0 silent CTT->CTC[Leu->Leu] {Y7A9A.1} 2527 CB6648_redo IV 16533636 1 T A 255 1.06 63 62 0 17 17 @AAAAAAAAaAAAAAAaA point 0 missense,SNP TTT->TTA[Phe->Leu],none {Y51H4A.6},{haw66558} 2531 CB6648_redo IV 16619813 1 C G 255 1.00 63 62 0 33 33 @GggggGgGggGGGGgGGGGgGGggGgGGgGGgg point 0 SNP none {haw66710,snp_Y51H4A[11]} 2533 CB6648_redo IV 16646588 1 T A 230 1.00 63 62 0 9 9 @aaaAaAaaa point 0 SNP none {haw66770} 2536 CB6648_redo IV 16760578 1 C T 255 1.25 63 62 0 38 38 @TttTTtTtTtTTtttTTtTTttTTTtttTTTtTtttTT point 0 SNP none {haw66850} 2537 CB6648_redo IV 16786381 1 G T 255 1.00 63 62 0 36 36 @ttTttTTTttTttTtTtTTtTTtTTTTTTttTTTTt point 0 SNP none {haw66890} 2538 CB6648_redo IV 16848870 1 A C 255 3.56 63 62 0 32 32 @cCCccCCCCCCCCCCccCCCccCCCcCcCCCC point 0 nongenic,nongenic,nongenic 1084 into,430 into,704 into {Y116A8A.9.2},{Y116A8A.9.3},{Y116A8A.9.1} 2543 CB6648_redo IV 16939349 1 T G 255 1.00 63 62 0 62 62 @GggGGgGGgGgggGGgGGgggGGGggggggGggGGGggGGGGGGGgGGgGGGGGGGGGGGGG point 0 SNP none {haw67104} 2544 CB6648_redo IV 16945230 1 A G 48 1.75 63 62 70 138 208 @GGg.g,GGGGGGGG,.gggG,,gGG.gGGGGGGgGGGGGgG,.ggg.,GGGG,G.,GG..G.GGG,.ggGGG..,,gggggGGGGggg.,.gG,..GGG point 0 nongenic,nongenic,nongenic -1854 upstream,-6161 upstream,1583 into {Y116A8C.12.1,Y116A8C.12.2},{Y116A8C.10b.2},{Y116A8C.9} 2545 CB6648_redo IV 17011345 1 A C 3 2.00 63 58 4 14 18 @.cccc.ccc.cccc.ccc point 0 nongenic,nongenic 3198 into,3513 into {Y116A8C.16b},{Y116A8C.16a} 2546 CB6648_redo IV 17011658 1 T G 29 2.00 63 24 1 16 17 @GGGGGGGGGGGGGGGG, point 0 nongenic,nongenic 2885 into,3200 into {Y116A8C.16b},{Y116A8C.16a} 2547 CB6648_redo IV 17086649 1 T C 255 1.00 63 62 0 39 39 @CcCCCccCcCCcCccCCcCCCCccccccCCccccccccC point 0 missense CAT->CGT[His->Arg] {Y116A8C.26a} 2548 CB6648_redo IV 17228760 1 T G 49 1.00 63 46 1 3 4 @.Ggg point 0 missense AAT->CAT[Asn->His] {Y116A8B.5} 2549 CB6648_redo IV 17228761 1 G C 47 1.00 63 48 1 3 4 @.Ccc point 0 premature_stop TAC->TAG[Tyr->stop] {Y116A8B.5} 2550 CB6648_redo IV 17340972 1 A T 255 1.00 63 62 0 57 57 @TtttTTTtttTTttttTTttTtTTtTTTTtttTttTTTtTttttttTTTtttTtTTt point 0 missense ATT->AAT[Ile->Asn] {C49C3.9} 2551 CB6648_redo IV 17491300 1 G A 255 1.00 63 62 0 70 70 @AaAAAaAAAaAAAAAAAAAAAAAAAAAAAaaAAAAaAAAAAAaaAAaAAAAAaAAaAAAAAaaaAaAAAa point 0 SNP none {haw67744} 2552 CB6648_redo IV 17491319 1 C T 255 1.00 63 62 0 61 61 @TTTTttTTTTtTTTTTTttTTtTTTTTtTTtTTTTTtttTtTTTtTTTtTTtTttTttTtt point 0 SNP none {haw67745} 3970 CB6648_redo MtDNA 5079 1 G A 255 1.00 63 62 0 255 255 @AAAAAAAAAAAAAAAAAAAAaaaaaaaaaaaaaaaaaAAAAAAAAAAAAAAAAAAAAAAAaaaaaaaaaaaaaAAAAAAAAAAAAAAAAAAAAAAAAAA point 0 silent GGG->GGA[Gly->Gly] {MTCE.21} 3971 CB6648_redo MtDNA 8429 1 A G 255 1.00 63 62 0 255 255 @GGGGGGGGGGGGGGGGGggggggggggggggggggGGGGGGGGGGGGGGGGGGGGGgggggggggggGGGGGGGGGGGGGGGGGGGGGGGGGGGGGggg point 0 silent,three_prime_UTR GTA->GTG[Val->Val],none {MTCE.26},{MTCE.25} 3972 CB6648_redo MtDNA 12260 1 T A 255 1.00 63 62 0 255 255 @AAAAAAAAAAAaaaaaaaaaaaaaaAAAAAAAAAAAAAAAAAAAAAaaaaaaaaaAAAAAAAAAAAAAAAAAAAAAAAaaaaaaaaAAAAAAAAAAAAA point 0 silent,three_prime_UTR GCT->GCA[Ala->Ala],none {MTCE.35},{MTCE.34} 3973 CB6648_redo MtDNA 12998 1 C T 255 1.00 63 62 1 254 255 @tttttttttttTtttttttttttTtttttttttttttttttTttttttttttTttttttttttttttttttttttttttttttttttttTTtttttttt point 0 silent,three_prime_UTR GGC->GGT[Gly->Gly],none {MTCE.35},{MTCE.34} 2555 CB6648_redo V 705 1 C T 255 1.88 63 62 10 36 46 @T.ttTT..TT.TT.TTT,tt,T,,t.TTTTTTTTtTtttttTTTTT point 0 nongenic -774 upstream {cTel3X.1} 2556 CB6648_redo V 721 1 C G 255 1.69 63 62 3 32 35 @g,GG,g.GGGGGGGGgGgggggGGGGGGGGGgGgg point 0 nongenic -758 upstream {cTel3X.1} 2557 CB6648_redo V 46068 1 G C 240 1.00 63 62 0 12 12 @ccccccCccccc point 0 nongenic,nongenic -2853 upstream,602 into {B0348.1},{B0348.2} 2558 CB6648_redo V 46069 1 T G 245 1.00 63 62 0 14 14 @ggggggGggggggg point 0 nongenic,nongenic -2852 upstream,603 into {B0348.1},{B0348.2} 2559 CB6648_redo V 46079 1 C A 255 1.00 63 62 0 16 16 @AaaaaaaaAAAaaaAa point 0 nongenic,nongenic -2842 upstream,613 into {B0348.1},{B0348.2} 2560 CB6648_redo V 46135 1 C G 255 1.00 63 62 0 43 43 @ggGgGgGggggggGGGGgGggGgggGggGGgGgggGGGggGGG point 0 SNP none {haw67774} 2561 CB6648_redo V 112507 1 A G 255 1.00 63 62 0 36 36 @gGggGGGgGGGgGgGGGGgGGGgggGgGgggGGgGG point 0 silent GAA->GAG[Glu->Glu] {Y38C9A.1} 2562 CB6648_redo V 198833 1 A T 255 1.00 63 62 0 29 29 @TttTtTtTtTTttTTTTtTTTtTTTTTtt point 0 nongenic,nongenic -3894 upstream,1855 into {DC2.8},{Y108G3AL.7} 2563 CB6648_redo V 265179 1 C A 255 3.75 63 62 1 254 255 @AAAAaaaaAAAaaaAAAAAAAAAAAAAAAAaaaaaaaaaaaaAAAAaaaaaAAAAAAAaaaAAAAAaaaAA,AAAAAAAaaaaaaaaaAAAAAAAAaaa point 0 nongenic,nongenic -3127 upstream,-7197 upstream {Y58G8A.1},{R02C2.4} 2564 CB6648_redo V 265207 1 C A 255 1.31 63 62 1 254 255 @AAAAAAAaAAAAAAAAAAAAAAAAAAAAaAAAAAAAAAAAAAAAAaaAAAAAAAAAAAAAaaaaaAAAAAAAAAAAAAAAAAAAAAAAAAAAAAaaaAA point 0 SNP none {haw67964} 2565 CB6648_redo V 265223 1 T C 255 3.00 63 62 356 -101 255 @Cc,CCC,cCCcCCCCCCCCCCCCCC,cccccCCC,CCCCCCCCCCCCCCCCCccc.cCCCCCCCCCCCCCC,CCCCCcccCCCCCCCCCCC,CCCc.c, point 0 nongenic,nongenic -3083 upstream,-7241 upstream {Y58G8A.1},{R02C2.4} 2566 CB6648_redo V 265542 1 G A 110 3.12 63 62 185 70 255 @,,,,,,,,t..t.a.aa.a..a...,,,,,,,,,,,,a..a.aaaa...aa.a.,,,,,,,,,,,,ta....aaa.aaaata.aa...a.,,,,,,,,. point 0 SNP none {haw67966} 2567 CB6648_redo V 265892 1 G T 147 4.44 45 18 84 171 255 @TTCCTTTTATTCTttttttttcTT,CTTTTtttttatt,T,,ttctctttc.ttT,tttttttttTTtctcttcctcttttcttt,T,TTtctttt.tT point 0 nongenic,nongenic -2414 upstream,-7910 upstream {Y58G8A.1},{R02C2.4} 2568 CB6648_redo V 265967 1 A T 3 5.19 0 6 15 144 159 @ttttttttttttttttt,ttttttt,.,t.tttttttttttt,tttttttttttttttttttttttttttttt,ttttttttttttttttttttttttt point 0 nongenic,nongenic -2339 upstream,-7985 upstream {Y58G8A.1},{R02C2.4} 2569 CB6648_redo V 266107 1 T C 3 5.25 0 0 17 51 68 @CCCcCcCC,ccCc.c.c,C.C,,.C,C,.CC.cCCCC,cCccC,,.ccccC,cccCCcccCCccCccc point 0 nongenic,nongenic -2199 upstream,-8125 upstream {Y58G8A.1},{R02C2.4} 2570 CB6648_redo V 266166 1 A C 54 3.62 46 62 315 -60 255 @ccc.c.c.c.......C.c..c..c..ccc..c,,,C...c.c..CCC.c.c.cCc...cc.cC,c...c..CCCC,.cccccc,,,C,.ccccc.c.c point 0 nongenic,nongenic -2140 upstream,-8184 upstream {Y58G8A.1},{R02C2.4} 2571 CB6648_redo V 266622 1 T C 3 4.69 0 14 20 31 51 @CCCcc.,c..,CCC.cc,CCCC...,CCC.,C,,CC,Cc,,CC.ccC.CCc point 0 nongenic,nongenic -1684 upstream,-8640 upstream {Y58G8A.1},{R02C2.4} 2572 CB6648_redo V 266681 1 A C 20 3.88 37 46 256 -1 255 @.,C.c.CCC.,CC..C,,CC,,Cccc,,C,CCCcc,C,,C,,C,ccc,,,,..c,,,,CC,.c.,C,C,,.,C.,,,,,ccccc,,,ccCCC,..cccc point 0 nongenic,nongenic -1625 upstream,-8699 upstream {Y58G8A.1},{R02C2.4} 2573 CB6648_redo V 306867 1 G A 112 6.75 63 62 1 7 8 @aaaaaaa, point 0 nongenic,nongenic,nongenic -2152 upstream,1429 into,552 downstream {F33E11.3},{F33E11.6b},{F33E11.6a} 2574 CB6648_redo V 306925 1 G A 195 1.06 63 62 0 11 11 @AAAAAAAAAAA point 0 nongenic,nongenic,nongenic -2210 upstream,1487 into,494 downstream {F33E11.3},{F33E11.6b},{F33E11.6a} 2575 CB6648_redo V 361876 1 A G 255 1.00 63 62 0 32 32 @ggGgGGgGGGgggGgGgGgGGGGgggGggGGg point 0 SNP none {haw68038} 2576 CB6648_redo V 775416 1 C T 255 1.00 63 62 0 56 56 @TtTtTtTTTttTttttTtttttTttTtTtTtTttttTTtTttttttttTTTTtttT point 0 nongenic,nongenic,nongenic -2156 upstream,420 into,559 downstream {R09E12.9},{R09E12.2},{R09E12.3} 2577 CB6648_redo V 897208 1 C A 255 1.00 63 62 0 54 54 @aaaAaAAAAAaaaAaAaaaaaAaaaaaaAaAaaaaaAAaaAaaaaAAaAaAaAa point 0 nongenic,nongenic -7931 upstream,1946 into {T02B11.6},{T02B11.7} 2578 CB6648_redo V 907030 1 C T 255 1.00 63 62 0 47 47 @tTTtTtttTttTtTttTTtttTttttttttttTttTtTttttTtTtT point 0 SNP none {haw69383} 4554 CB6648_redo V 931553 0 X X -1000 -999.99 -1000 -1000 4 0 4 @,,..Aaa indel 0 nongenic -4847 upstream {Y50D4C.2} 2579 CB6648_redo V 931554 1 G T 4 1.00 63 34 3 4 7 @TTtt,.. point 0 nongenic -4845 upstream {Y50D4C.2} 2585 CB6648_redo V 1123372 1 T G 24 1.00 63 42 1 3 4 @G.gg point 0 nongenic 1319 into {W07B8.3} 2589 CB6648_redo V 1210301 1 A G 85 1.00 63 62 1 4 5 @gggg, point 0 nongenic 2411 into {Y50D4A.1a,Y50D4A.1b} 160857 CB6648_redo V 1210370 219 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered codon 136 to codon 210 (9 % of 822 codons),codon 5 to codon 79 (11 % of 691 codons) {Y50D4A.1a},{Y50D4A.1b} 2595 CB6648_redo V 1273548 1 C G 130 1.44 63 62 0 9 9 @ggggggggg point 0 nongenic,nongenic 573 downstream,663 downstream {Y75B7B.1},{Y75B7B.2} 2597 CB6648_redo V 1553951 1 T G 255 1.00 63 62 0 33 33 @GgGGGGGGgGGGGGgGGggggggGgGgGggGGG point 0 nongenic,nongenic -6705 upstream,-847 upstream {F52F10.1},{F52F10.5} 2598 CB6648_redo V 1637978 1 G T 231 5.69 63 62 65 86 151 @,T,..tTT..T.TTt.T..T.TTTT,TT,,,,,,,TtT,Tt.,.,TTt.,ttTTT.tTTTT,TTTTTT,TTTTTTttttTTTTTTTTTTtttTTTTTT, point 0 nongenic,nongenic -2330 upstream,1305 into {Y46H3D.2},{Y46H3D.3} 2599 CB6648_redo V 1638167 1 T A 3 7.00 0 2 58 86 144 @A.AA.AA...,..,,AAaaAAaA.AAa..aAA....,aaAaAaaaa,a.AaAaa.AaA.aaAAAA.aaaAAAAA..aAA.aaAAAAAA.aaAAa.aAAA point 0 nongenic,nongenic -2141 upstream,1116 into {Y46H3D.2},{Y46H3D.3} 2600 CB6648_redo V 1638979 1 A G 255 3.00 63 62 106 149 255 @,,,G,Ggg..gggg...g.g.,,G,TGgggg..GGG,GG,,GGGGGg.gggg.gggggGG,G,GGGGGGGG,gggg.ggg..,G,GGGGG,,,Gggggg point 0 nongenic,nongenic -1329 upstream,304 into {Y46H3D.2},{Y46H3D.3} 2601 CB6648_redo V 1712941 1 C T 6 3.75 0 4 4 11 15 @TTTTT.Tt.t..Ttt point 0 nongenic,nongenic -4302 upstream,1550 into {ZK697.5},{Y46H3C.1} 2610 CB6648_redo V 1714669 1 T C 255 2.44 63 62 5 19 24 @.....CCCCCCCCccCCCCCCCCC point 0 nongenic,nongenic -2574 upstream,732 into {ZK697.5},{Y46H3C.1} 2611 CB6648_redo V 1732428 1 C T 255 1.00 63 62 0 41 41 @tTttTtttTTTtttTTttTTTtTttttTTTtTTTtTTTtTT point 0 nongenic,nongenic -2441 upstream,-426 upstream {ZK697.10},{ZK697.6} 2619 CB6648_redo V 1933692 1 G C 20 1.00 63 32 1 3 4 @,ccc point 0 nongenic -11263 upstream {T06A1.4} 4556 CB6648_redo V 2019954 0 X X -1000 -999.99 -1000 -1000 3 1 4 @,,,aAa indel 0 nongenic,nongenic -2658 upstream,-3415 upstream {F59A7.5b},{F59A7.2} 2622 CB6648_redo V 2255011 1 G A 255 2.38 63 62 0 19 19 @aaAaAaAaAAAAaAAAAAA point 0 nongenic -407 upstream {F41B5.8} 2626 CB6648_redo V 2578146 1 G C 255 1.00 63 62 0 28 28 @ccccCcccccccCccCccccCcccCcCc point 0 nongenic,nongenic -2725 upstream,244 into {C29G2.3},{C29G2.4} 2627 CB6648_redo V 2646661 1 G C 68 1.00 63 62 3 7 10 @...CCCCCCC point 0 nongenic,nongenic 282 downstream,404 downstream {W02H5.1},{W02H5.8} 2637 CB6648_redo V 2886702 1 T C 103 2.19 63 62 19 42 61 @,.,..,.,,.,,,......CccCcCCCCccccCcCccccCcCCcccCCccccCcCccCccc point 0 nongenic,nongenic 277 downstream,487 downstream {F37B4.9},{F37B4.8} 2639 CB6648_redo V 3017813 1 A G 255 5.31 63 62 0 29 29 @GGgGggGGGGGGgGgGgggggGGGGGGgg point 0 nongenic 546 downstream {K12D9.14} 2642 CB6648_redo V 3276306 1 A C 103 1.00 63 62 4 7 11 @cCCCccC.... point 0 nongenic,nongenic 196 downstream,778 downstream {T28A11.3},{T28A11.21} 2643 CB6648_redo V 3475496 1 G A 255 1.00 63 62 0 27 27 @aaaAaAAaAAAAAaaaAaAaAaaaAAa point 0 nongenic,nongenic -376 upstream,906 downstream {C02A12.8},{C02A12.9} 2644 CB6648_redo V 3553614 1 T C 255 1.00 63 62 0 41 41 @cccCccccCccCccCccCcCCCcccccCcCcccCcCCCCcc point 0 nongenic,nongenic,nongenic -1750 upstream,468 into,994 downstream {T24A6.15},{T24A6.20},{T24A6.18} 2647 CB6648_redo V 3568979 1 G T 206 5.25 63 62 0 13 13 @TTTTtTTttTTTT point 0 nongenic,nongenic -1189 upstream,-3522 upstream {F40C5.2},{T24A6.17} 2648 CB6648_redo V 3811974 1 A G 29 1.00 63 2 1 4 5 @GgGG. point 0 nongenic,nongenic -353 upstream,-606 upstream {H10D18.4},{H10D18.2} 2649 CB6648_redo V 3844326 1 G A 122 1.00 63 0 0 4 4 @AAaa point 0 nongenic,nongenic -333 upstream,303 downstream {F47C10.6},{F47C10.1} 2655 CB6648_redo V 4139271 1 C G 12 1.00 63 0 4 5 9 @...,GgggG point 0 nongenic,nongenic -146 upstream,460 downstream {Y45G5AL.2},{T05B4.1} 2656 CB6648_redo V 4164869 1 A C 255 1.00 63 62 0 31 31 @ccCcccCCCCCCccCcCccccccCcCCCcCC point 0 missense ATT->CTT[Ile->Leu] {Y45G5AM.3} 2658 CB6648_redo V 4321387 1 T A 175 1.00 63 62 0 5 5 @AaAaA point 0 nongenic,nongenic,nongenic -2060 upstream,-5728 upstream,954 into {ZC132.9},{D2063.1},{R02D1.1} 2659 CB6648_redo V 4321389 1 A T 136 1.00 63 62 1 5 6 @TtTtT, point 0 nongenic,nongenic,nongenic -2062 upstream,-5726 upstream,956 into {ZC132.9},{D2063.1},{R02D1.1} 2660 CB6648_redo V 4329455 1 A C 255 1.00 63 62 0 33 33 @CCCcCcccCCCCcCCCCccCCcCCccCcCCCcc point 0 SNP none {haw75410} 2661 CB6648_redo V 4343578 1 A C 233 8.62 63 62 2 38 40 @CCCCCCCCCCCCCCCc.CCCCCCCCCCCC.cCCCCCcCCN point 0 nongenic,nongenic -2281 upstream,2154 into {D2063.3a.1},{F32D1.1} 2662 CB6648_redo V 4351933 1 T G 196 8.50 63 62 2 8 10 @gGgggggG.. point 0 nongenic 2164 into {F32D1.3} 2663 CB6648_redo V 4447836 1 C G 226 1.44 63 62 0 16 16 @GGGGGGGGGGGGGGGG point 0 nongenic,nongenic -4760 upstream,2706 into {Y47D7A.16},{Y47D7A.14} 2665 CB6648_redo V 4597289 1 A G 255 1.00 63 62 0 27 27 @GgggggGGGgggggGggggGGGGggGg point 0 SNP none {haw75689} 2668 CB6648_redo V 4612571 1 T G 255 1.00 63 62 0 34 34 @gGGGGGgGgGGgGGgGGGgggggGGGGGGGgggg point 0 missense GAG->GCG[Glu->Ala] {Y61A9LA.10} 2669 CB6648_redo V 4704362 1 T A 23 1.00 63 62 3 5 8 @...AAaAA point 0 nongenic,nongenic -3896 upstream,-6551 upstream {ZC266.1},{F39G3.6} 160859 CB6648_redo V 4909246 91 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 389 to 480 bp into {H23N18.1} 2673 CB6648_redo V 5084618 1 G C 114 2.00 63 62 1 5 6 @CCCCC, point 0 silent GTC->GTG[Val->Val] {Y58A7A.4} 2674 CB6648_redo V 5084620 1 C G 114 2.00 63 62 1 5 6 @GGGGG, point 0 missense GTC->CTC[Val->Leu] {Y58A7A.4} 2675 CB6648_redo V 5084624 1 G A 87 2.00 63 4 1 3 4 @AAA, point 0 silent TAC->TAT[Tyr->Tyr] {Y58A7A.4} 2677 CB6648_redo V 5084723 1 A T 129 2.00 63 62 0 7 7 @tTTTTTt point 0 nongenic,nongenic -3841 upstream,270 into {Y58A7A.3},{Y58A7A.4} 2678 CB6648_redo V 5084742 1 G A 235 2.00 63 62 0 22 22 @aAAAAAaaAaAAAAAaAaAAAA point 0 missense CCG->CTG[Pro->Leu] {Y58A7A.4} 2679 CB6648_redo V 5084780 1 A G 227 2.00 63 62 0 29 29 @GGGGGgGgGGGGggggGGggGGgGggGGg point 0 silent GAT->GAC[Asp->Asp] {Y58A7A.4} 2680 CB6648_redo V 5084791 1 C A 218 2.00 63 62 0 24 24 @aaaaAAaaAAaAaaAAaAaAAAaA point 0 missense GCA->TCA[Ala->Ser] {Y58A7A.4} 2681 CB6648_redo V 5117072 1 T G 3 1.00 63 0 1 8 9 @GGG,GGGGG point 0 nongenic,nongenic,nongenic -2882 upstream,-3332 upstream,2123 into {C04F5.1},{C04F5.8},{C04F5.9} 2685 CB6648_redo V 5124714 1 T A 255 1.00 63 62 0 32 32 @aAaaaaaaAAAAaAaAaaaAAaAAAAaaAAAa point 0 SNP none {haw76186} 2686 CB6648_redo V 5162301 1 C G 63 1.00 63 4 0 4 4 @GGgG point 0 nongenic -423 upstream {C03A7.7} 2687 CB6648_redo V 5280059 1 C G 38 4.75 63 10 5 9 14 @,,G,,gg,gggggg point 0 nongenic -1973 upstream {B0238.9} 2690 CB6648_redo V 5284679 1 C T 198 8.81 63 62 0 32 32 @TttTttttTtttTtTTTtTTttTTTTTTTttt point 0 nongenic -6593 upstream {B0238.9} 2691 CB6648_redo V 5284688 1 T C 255 3.69 63 62 21 201 222 @..,....,.c.,cC,CcCCc.CCCCCC,cc.CCCCCCCCCCCccCCCCCCCCCCCccccCCCCCccccc.cccccCCCCCCCCCCCCC.cccccccccc point 0 nongenic -6602 upstream {B0238.9} 2699 CB6648_redo V 5755509 1 G T 44 1.00 63 62 6 12 18 @.t.ttt.tt..ttt.ttt point 0 missense CAG->AAG[Gln->Lys] {K09H11.11} 2704 CB6648_redo V 6048318 1 C A 255 1.00 63 62 0 33 33 @aaAAaaaaAAAAAaAAAAaAaAAAAAaaAaAAA point 0 SNP,three_prime_UTR none,none {haw77329},{R01B10.5.1} 2705 CB6648_redo V 6052074 1 T C 255 1.00 63 62 0 21 21 @cCcCCcCCCCCCCcCCCcccC point 0 SNP none {haw77333} 2706 CB6648_redo V 6070764 1 C G 32 6.12 14 26 0 10 10 @GGggGgggGg point 0 nongenic,nongenic -25246 upstream,-712 upstream {Y38A10A.7},{Y38A10A.4} 2729 CB6648_redo V 6172858 1 T C 3 6.06 0 2 10 53 63 @c.,C....C..CC,CCCCCCCCCcCCCcCCccCCCCCCcCCCCCCCCCCCCCCC,CCCCCCCC point 0 silent CAA->CAG[Gln->Gln] {W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g} 2732 CB6648_redo V 6177079 1 C A 115 2.62 63 62 3 14 17 @AAaaaaaaaaaaaa,.. point 0 silent GTG->GTT[Val->Val] {W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g} 2733 CB6648_redo V 6177083 1 T G 3 4.81 0 18 3 5 8 @ggggg,.. point 0 missense CAA->CCA[Gln->Pro] {W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g} 2737 CB6648_redo V 6178815 1 T C 3 6.94 0 2 6 11 17 @,..,ccc,cccc,cccc point 0 missense ATT->GTT[Ile->Val] {W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g} 2738 CB6648_redo V 6179154 1 C T 3 7.12 0 2 11 13 24 @TT..,TTTTT.TT,Tt.t.T.... point 0 missense GCA->ACA[Ala->Thr] {W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g} 2740 CB6648_redo V 6183103 1 T A 33 5.38 63 62 41 75 116 @aaaaa,aaa,AA,aa.aaaaaaaaa,aaaA,Aaa,,Aaaa,.AaaaaaaaaAAAa.aa.aaaa,a.,Aaaa,.aa..a,.,a.a,A,.a,aaa,,..a. point 0 silent CCA->CCT[Pro->Pro] {W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g} 2741 CB6648_redo V 6302463 1 A G 255 1.75 63 62 0 32 32 @gGggGGGgGGGgggGgGGgggGgGgggggGGg point 0 nongenic,nongenic -1318 upstream,-3026 upstream {K12B6.1},{K12B6.7} 2748 CB6648_redo V 6865466 1 C G 20 1.00 63 36 1 3 4 @.GGg point 0 nongenic,nongenic -10679 upstream,-4825 upstream {C55H1.2},{T19F4.1a,T19F4.1b} 2749 CB6648_redo V 6889636 1 C G 255 1.00 63 62 0 33 33 @gGgGgGggggGgggGgggggggGgggGggGggg point 0 silent GCC->GCG[Ala->Ala] {K11C4.3b} 2750 CB6648_redo V 6889637 1 G C 255 1.00 63 62 0 33 33 @CcCcCccccCcccCcccccccCcccCccCcccc point 0 missense GCA->CCA[Ala->Pro] {K11C4.3b} 2752 CB6648_redo V 6941197 1 T C 3 5.75 0 2 5 47 52 @,C.CccCCc.CCCCCCcc.ccCCCCCCCCCcCcCCCCCccCccc.ccCcCCC point 0 nongenic -5353 upstream {Y57E12B.3} 2756 CB6648_redo V 6942940 1 A G 3 8.12 0 0 9 49 58 @Gggg,gGggGgggGGGggGgggggggG,GggggGGgggGggggG,gg.gg,,,G,gg, point 0 nongenic -7096 upstream {Y57E12B.3} 2757 CB6648_redo V 6956711 1 T C 255 1.00 63 62 0 18 18 @CCCccCcCcCcccCCCcc point 0 five_prime_UTR,missense none,CTA->CCA[Leu->Pro] {T07H8.4f.2,T07H8.4f.3},{T07H8.4a,T07H8.4b,T07H8.4c,T07H8.4d.1,T07H8.4d.2,T07H8.4h.1,T07H8.4h.2,T07H8.4i,T07H8.4j} 2758 CB6648_redo V 6956743 1 C G 255 1.00 63 62 0 16 16 @ggggggGGggggGggG point 0 five_prime_UTR,missense none,CGC->GGC[Arg->Gly] {T07H8.4f.1,T07H8.4f.2,T07H8.4f.3},{T07H8.4a,T07H8.4b,T07H8.4c,T07H8.4d.1,T07H8.4d.2,T07H8.4h.1,T07H8.4h.2,T07H8.4i,T07H8.4j} 2759 CB6648_redo V 6956744 1 G C 255 1.00 63 62 0 17 17 @cccccCCccccCccCcc point 0 five_prime_UTR,missense none,CGC->CCC[Arg->Pro] {T07H8.4f.1,T07H8.4f.2,T07H8.4f.3},{T07H8.4a,T07H8.4b,T07H8.4c,T07H8.4d.1,T07H8.4d.2,T07H8.4h.1,T07H8.4h.2,T07H8.4i,T07H8.4j} 4564 CB6648_redo V 7205626 0 X X -1000 -999.99 -1000 -1000 6 -2 4 @,...,.aA indel 0 three_prime_UTR none {C13F10.4} 2762 CB6648_redo V 7205627 1 G C 38 1.00 63 34 3 6 9 @CcccCc.,, point 0 three_prime_UTR none {C13F10.4} 2763 CB6648_redo V 7205628 1 C A 35 1.00 63 38 3 5 8 @aaaAa.,, point 0 three_prime_UTR none {C13F10.4} 2764 CB6648_redo V 7245105 1 C G 255 1.00 63 62 0 39 39 @GgggGgGgggGgggggggGGgGGGgGGgGGggGgggGgg point 0 SNP none {haw78505} 4565 CB6648_redo V 7386791 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,,,Aa indel 0 nongenic -691 upstream {C03G6.19} 2765 CB6648_redo V 7403427 1 A G 255 1.00 63 62 0 53 53 @gGggGGGGGgGgGGgggGGGGGGGGGgGgGgggggggGGgGgGGGGggggggg point 0 silent,SNP GAA->GAG[Glu->Glu],none {R13D7.3},{uCE5-1535} 2766 CB6648_redo V 7546600 1 G A 255 1.00 63 62 0 30 30 @AAAaAaaaaAAAaaaAaAaaAAAaaaAaaA point 0 missense,SNP CAC->TAC[His->Tyr],none {C54F6.14},{uCE5-1545} 2767 CB6648_redo V 7725862 1 G A 69 1.00 63 62 1 5 6 @Aaaaa, point 0 nongenic,nongenic,nongenic -1815 upstream,-2931 upstream,230 into {ZK105.6},{Y97E10C.1.1},{ZK105.8} 2768 CB6648_redo V 7860214 1 C A 255 4.75 63 62 0 38 38 @AAAaaAaAaaAaaaAaaAaaaAAAaaAaaaAAaaaaaA point 0 nongenic,nongenic 323 downstream,510 downstream {C37C3.1a},{C37C3.1b} 2769 CB6648_redo V 7860248 1 A T 255 6.00 63 62 0 32 32 @TTttTtttTTtttttTTttttTTtTtTtttTt point 0 nongenic,nongenic 357 downstream,544 downstream {C37C3.1a},{C37C3.1b} 2770 CB6648_redo V 7912537 1 G C 30 8.25 63 2 1 9 10 @CCCCCCCCc, point 0 nongenic,nongenic -12695 upstream,-13225 upstream {F40A3.7},{Y97E10B.4} 2784 CB6648_redo V 8056170 1 G T 255 5.44 63 62 0 28 28 @tTTTttTttTttttTTTTtTtTtttTtt point 0 nongenic,nongenic -235 upstream,165 downstream {ZC513.1},{ZC513.2} 2801 CB6648_redo V 8533786 1 G C 88 1.44 63 62 2 5 7 @,.ccccC point 0 nongenic,nongenic,nongenic -721 upstream,45 downstream,757 downstream {F45F2.12},{F45F2.4},{F45F2.13} 2804 CB6648_redo V 8804641 1 T A 255 1.00 63 62 0 36 36 @AaaAaAaaaaaaaaAAaAAaaaaAAaaAAAAAaaaa point 0 nongenic,nongenic -3668 upstream,750 downstream {C01B7.5},{C01B7.6} 2808 CB6648_redo V 9162494 1 T G 255 1.75 63 62 0 35 35 @GGGGgGgGgGGGGGGGgGGgGggGgGgGGgGGGGG point 0 missense CAA->CCA[Gln->Pro] {B0222.7} 2809 CB6648_redo V 9338832 1 A T 74 2.69 63 34 1 3 4 @tTt, point 0 nongenic,nongenic 0 downstream,215 downstream {K07B1.2},{K07B1.8} 2812 CB6648_redo V 9340789 1 T G 32 1.50 63 30 2 2 4 @gg., point 0 five_prime_UTR none {K07B1.8} 2813 CB6648_redo V 9340791 1 C T 30 1.50 63 30 2 2 4 @tt., point 0 five_prime_UTR none {K07B1.8} 2814 CB6648_redo V 9340793 1 A C 31 1.50 63 30 2 2 4 @cc., point 0 five_prime_UTR none {K07B1.8} 2816 CB6648_redo V 9376379 1 G T 255 1.00 63 62 0 67 67 @TTTttttTtttTTtttTtTtTTttTTTTtTtTttTttTTTTTTttTTTTTTTtTTTttttTTtTtTT point 0 missense,SNP CAA->AAA[Gln->Lys],none {E02C12.10},{haw80948} 2821 CB6648_redo V 9603657 1 G T 255 9.75 63 62 10 37 47 @,t..T.tt.ttTtTTT,ttTTtT.T.TTTTtTTttTtTTTt.Ttt.t point 0 nongenic,nongenic -4877 upstream,-6117 upstream {K09G1.4a,K09G1.4b},{K09G1.3} 2822 CB6648_redo V 9603798 1 A G 246 4.81 63 62 6 13 19 @,.g..,.ggggggggGgGG point 0 nongenic,nongenic -4736 upstream,-6258 upstream {K09G1.4a,K09G1.4b},{K09G1.3} 2825 CB6648_redo V 9662867 1 T C 249 1.00 63 62 0 11 11 @CcCCCcCCCCC point 0 nongenic,nongenic -1279 upstream,-3805 upstream {B0331.2},{ZK287.1} 2826 CB6648_redo V 9663159 1 T G 255 1.00 63 62 0 30 30 @GggggggGGGGgGGgGGgGGggGGGgGgGg point 0 SNP none {haw81125} 2827 CB6648_redo V 9707449 1 T C 255 1.00 63 62 0 41 41 @CCCCCCCCcCCCCCCCcCCCCCCCcCCccCcCCcCccCcCC point 0 SNP none {haw81144} 2830 CB6648_redo V 9927293 1 T A 255 1.00 63 62 0 39 39 @aAAaaAAaAaaAaaaaAAaAaaAaaaAaAAAaaaAaaaa point 0 SNP none {haw81196} 2831 CB6648_redo V 9928614 1 C T 255 1.00 63 62 0 26 26 @tTTTTttTTttTTTTTTTTtTTTTTT point 0 silent,SNP CAG->CAA[Gln->Gln],none {T07C12.12},{haw81197} 4581 CB6648_redo V 10164059 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @.,..GG indel 0 nongenic,nongenic -3010 upstream,172 downstream {C51E3.10},{C51E3.6} 2833 CB6648_redo V 10230415 1 C G 84 1.00 63 42 3 7 10 @GGgGGgG,,, point 0 nongenic,nongenic -822 upstream,310 downstream {C12D8.17},{C12D8.16} 2834 CB6648_redo V 10230416 1 A C 43 1.00 63 62 4 7 11 @CCcCCcC,,,. point 0 nongenic,nongenic -821 upstream,311 downstream {C12D8.17},{C12D8.16} 2836 CB6648_redo V 10397712 1 C A 255 1.00 63 62 0 50 50 @AaAaAAaaaAaaaAAAAAAAAaaAAaaAAaAAAaAaaAaaAaaaaAAaaA point 0 SNP none {haw81401} 2837 CB6648_redo V 10444115 1 A T 255 1.00 63 62 0 35 35 @tTTtttttTtTTTTtttTTTtttTTtTtTTTtTTT point 0 SNP none {haw81421} 2839 CB6648_redo V 10449487 1 T C 239 5.81 63 62 36 101 137 @CCCccc.c.cc,.CCCc,CccCc.c,c.....c,,..,.cC..c,.cc..CCcccC.c....ccCCccCCCcCCCcCCCCcCCCccccCCCCcc,cccc point 0 nongenic 386 downstream {Y32F6A.6} 2842 CB6648_redo V 10449934 1 A G 3 8.38 0 18 1 19 20 @GGGGGGg,GGGgGGGGGGGG point 0 nongenic 833 downstream {Y32F6A.6} 2843 CB6648_redo V 10548754 1 G T 21 1.00 63 44 2 6 8 @ttttTt,. point 0 missense CCC->ACC[Pro->Thr] {F32G8.1} 2844 CB6648_redo V 10621928 1 C A 255 1.00 63 62 0 46 46 @aaAAaAaaAaAaaaAaaaAAAAAAAAAaaAaaaaaaAAAAAAaAaA point 0 SNP none {haw81482} 2846 CB6648_redo V 10866472 1 G A 213 1.69 63 62 9 24 33 @aAA,,aAAAaaAAAaaa,aAaaa,,AaA,a,,, point 0 nongenic,nongenic -14381 upstream,-702 upstream {F32D8.1},{F53H10.2a} 2847 CB6648_redo V 10893331 1 A C 255 1.00 63 62 0 56 56 @CcCccccCccCccccCcccCcCCCCccCcccCCcccCCcCcCCcCcCCCccCCCCC point 0 SNP none {haw81672} 2848 CB6648_redo V 11012491 1 A G 18 1.00 63 44 2 4 6 @.,gGgg point 0 nongenic -50 upstream {C13G3.1} 2854 CB6648_redo V 11026653 1 T G 34 1.00 63 0 0 6 6 @ggGGGg point 0 nongenic,nongenic,nongenic -3801 upstream,506 downstream,837 downstream {C13G3.2},{C13G3.3a.1},{C13G3.3a.2,C13G3.3b.1,C13G3.3b.2,C13G3.3c} 2855 CB6648_redo V 11180409 1 G A 255 1.00 63 62 0 42 42 @AaAaAAaaAAaaAAaaAAAaaAaaAaAaaAAaaAAaaaaaaa point 0 SNP none {haw81856} 2861 CB6648_redo V 11687322 1 C T 255 1.00 63 62 0 33 33 @TTTTTtTTTTttTtTttTTTTtTTtttTtttTt point 0 SNP none {haw82144} 2863 CB6648_redo V 11883417 1 A G 255 1.00 63 62 0 31 31 @GGgggggggGGggggGgggGGGgGgggGggg point 0 SNP none {haw82276} 2882 CB6648_redo V 12579466 1 G T 255 1.00 63 62 0 32 32 @TTttttTTTTTTtTttTttttttTTTtTTTTt point 0 SNP none {haw83048} 2885 CB6648_redo V 12647441 1 A C 62 1.00 63 62 6 9 15 @CCCCCCccc....,. point 0 nongenic,nongenic,nongenic -2396 upstream,-6991 upstream,623 into {F56H9.5},{F56H9.3},{F56H9.4} 2886 CB6648_redo V 12864064 1 A T 255 1.38 63 62 0 45 45 @TTTttTTttTTTTtTTTTTtTtTtTTtTtttTttTttTTttttTT point 0 nongenic,nongenic,nongenic,nongenic -1829 upstream,251 downstream,300 into,558 downstream {T07F10.5},{T07F10.1a},{T07F10.6},{T07F10.1b} 2887 CB6648_redo V 12864636 1 A G 153 2.00 63 62 3 24 27 @GGGGG.GGGGG..GGGGGGGGGGGGGG point 0 nongenic,nongenic,nongenic -1257 upstream,823 downstream,872 into {T07F10.5},{T07F10.1a},{T07F10.6} 2888 CB6648_redo V 12864640 1 C G 160 1.81 63 62 3 23 26 @GGG.GGGGG..GGGGGGGGGGGGGGG point 0 nongenic,nongenic,nongenic -1253 upstream,827 downstream,876 into {T07F10.5},{T07F10.1a},{T07F10.6} 4595 CB6648_redo V 12867714 0 X X -1000 -999.99 -1000 -1000 2 -1 1 @,,GgG indel 0 nongenic,nongenic -184 downstream,292 downstream {T07F10.6},{T07F10.3} 2889 CB6648_redo V 12915568 1 A T 255 1.00 63 62 0 52 52 @TTTttTTtTTTttTTtTTTTTTTtTtTttttTTttttttTtTTttTTTTtTt point 0 SNP none {haw83378} 2890 CB6648_redo V 12919477 1 A G 255 1.00 63 62 0 33 33 @GGggGggGgGGGGGGgGGGgggGGgGGGGGgGg point 0 SNP none {haw83380} 2891 CB6648_redo V 13150207 1 G A 67 1.00 63 60 3 6 9 @aAAAaa.,. point 0 missense GAT->AAT[Asp->Asn] {B0365.7} 2892 CB6648_redo V 13150208 1 A T 60 1.00 63 62 3 5 8 @TTTtt.,. point 0 missense GAT->GTT[Asp->Val] {B0365.7} 2893 CB6648_redo V 13183407 1 A T 24 1.25 63 62 0 9 9 @ggGGGTTTt point 0 nongenic,nongenic -2258 upstream,813 into {T09E8.5},{T09E8.4} 2896 CB6648_redo V 13466076 1 G A 255 1.00 63 62 0 42 42 @AAAAaAaaaaaAAAAaAaaAAaaAaAAAAAAAAAAaAaAAaA point 0 SNP none {haw83625} 2897 CB6648_redo V 13506485 1 T A 186 1.00 63 62 2 9 11 @..AaAaaAaaa point 0 nongenic,nongenic,nongenic -3759 upstream,283 into,5216 into {R11G10.1b.1},{R11G10.4},{R11G10.1a} 2898 CB6648_redo V 13506487 1 C T 216 1.00 63 62 2 11 13 @..TtTttTtttTt point 0 nongenic,nongenic,nongenic -3761 upstream,281 into,5214 into {R11G10.1b.1},{R11G10.4},{R11G10.1a} 2899 CB6648_redo V 13539850 1 G T 255 1.00 63 62 0 13 13 @tTTTtTttttTTt point 0 SNP none {haw83676} 2912 CB6648_redo V 13645668 1 G T 99 7.88 63 62 5 8 13 @T,TTT.TTT,T,. point 0 nongenic -11464 upstream {H37A05.2} 2913 CB6648_redo V 13645670 1 A C 102 8.25 63 62 6 7 13 @,CCC.CCC,C,.. point 0 nongenic -11466 upstream {H37A05.2} 2914 CB6648_redo V 13645672 1 A C 93 8.25 63 62 6 7 13 @,CCC.CCC,C,.. point 0 nongenic -11468 upstream {H37A05.2} 2917 CB6648_redo V 13645955 1 T C 255 1.00 63 62 2 20 22 @cccCcccccccCCcccC,c,Cc point 0 SNP none {haw83752} 2918 CB6648_redo V 13717171 1 T C 255 1.00 63 62 0 35 35 @CcCCccCcccccCCcccCCCCCCCCCcccCCCccc point 0 SNP none {haw83786} 2924 CB6648_redo V 13886659 1 T C 255 1.00 63 62 0 27 27 @CcCcCCCCCCCCcCcccCccCcCCcac point 0 SNP none {haw83916} 2925 CB6648_redo V 13888688 1 A G 255 1.00 63 62 0 54 54 @GGGgGGgggGgGGgGGgGGGGggGGGGGGGGGGGGgGgggGGGgGGgggGGGgg point 0 SNP none {haw83918} 2926 CB6648_redo V 13931064 1 A T 255 1.00 63 62 0 47 47 @TTTTTTtTtttTTttttttTTTTTtTttTTTTTttttTttttttTtt point 0 missense,SNP TTA->TTT[Leu->Phe],none {C06B3.14},{haw83931} 2927 CB6648_redo V 13981688 1 G A 26 1.00 63 62 12 18 30 @A.AAA..A.AAAAA..AA..AAAA...AA. point 0 silent GTC->GTT[Val->Val] {T26F2.2} 2928 CB6648_redo V 14130699 1 A T 255 1.00 63 62 0 23 23 @tTtttTTtTTTttTTTTTtTTtt point 0 nongenic,nongenic,nongenic -1734 upstream,10400 into,1635 into {H39E23.1c},{H39E23.1a},{H39E23.1b} 2930 CB6648_redo V 14380092 1 A G 255 1.00 63 62 0 31 31 @GgGggGggGggGgGGGgGgGGgGggggggGg point 0 nongenic,nongenic -1046 upstream,-11726 upstream {F56A12.2},{C15H11.10} 2931 CB6648_redo V 14524337 1 C G 31 1.00 63 12 0 4 4 @Gggg point 0 nongenic,nongenic,nongenic -1028 upstream,-227 upstream,-228 upstream {C53A5.3.1},{C53A5.1.1},{C53A5.1.3} 2936 CB6648_redo V 14733448 1 G C 255 1.00 63 62 0 37 37 @CCCCccCcCcCCCCcCcCccCccCCCcCCcCCCcccc point 0 missense CTT->GTT[Leu->Val] {Y50E8A.4a,Y50E8A.4b,Y50E8A.4c} 2937 CB6648_redo V 14743838 1 T C 255 1.12 63 62 0 14 14 @CCCcCCCcCCccCC point 0 nongenic -2532 upstream {Y50E8A.6} 2943 CB6648_redo V 14744337 1 G C 198 2.19 40 62 0 18 18 @CcccCCCCCcCcCCCCCC point 0 nongenic -3031 upstream {Y50E8A.6} 2944 CB6648_redo V 14744895 1 T A 226 1.00 63 62 1 13 14 @AAAAaAa.AAAaAA point 0 nongenic,nongenic -3589 upstream,767 downstream {Y50E8A.6},{Y50E8A.7} 4606 CB6648_redo V 14768216 1 X X -1000 -999.99 -1000 -1000 11 -1 10 @..gg..gg.,g.ggg,... indel -1 nongenic,nongenic -17779 upstream,-5119 upstream {Y50E8A.17},{Y50E8A.16} 2994 CB6648_redo V 15434045 1 G A 104 1.81 63 62 23 52 75 @AA.A,A,AAAAAAAAA,,AAAA,,,AAAAA,AAAA,A,,,,,,AAaAA,a..A.Aaa,AAAAaaAAAaaAA..aA point 0 nongenic -1501 upstream {T26H5.8} 2995 CB6648_redo V 15434980 1 G C 67 1.00 63 62 50 99 149 @CCC.cccccccc,..cccC,CccC.ccC.c.cc,C.c,.,.c.....cc.C.c,CccccC.C,C.ccCcc,.c,C.cCCC,,ccCc,cCCc,Ccc,C.. point 0 SNP none {haw85321} 2996 CB6648_redo V 15479200 1 C A 255 1.00 63 62 0 35 35 @AaaaAaAAAAAaaaaAaAAAaaaAaaAAAAaAAAa point 0 SNP none {haw85361} 2997 CB6648_redo V 15581676 1 T C 255 1.62 63 62 0 38 38 @cccCCccccccCCccccCccCCccccCccCccCccCCC point 0 nongenic,nongenic -3995 upstream,-854 upstream {B0391.10},{F28F8.7} 2998 CB6648_redo V 15581801 1 T C 255 1.00 63 62 0 12 12 @ccCccCCCCcCC point 0 nongenic,nongenic -3870 upstream,-979 upstream {B0391.10},{F28F8.7} 3000 CB6648_redo V 16093681 1 C A 100 1.50 63 24 1 5 6 @aaAAA. point 0 nongenic -1516 upstream {F22B8.7} 3001 CB6648_redo V 16093682 1 G C 64 1.56 63 24 2 5 7 @ccCCC., point 0 nongenic -1515 upstream {F22B8.7} 3002 CB6648_redo V 16093684 1 A G 25 1.69 63 62 3 3 6 @GGG.,, point 0 nongenic -1513 upstream {F22B8.7} 3003 CB6648_redo V 16393797 1 G C 255 1.00 63 62 0 42 42 @ccccCCCcCccCccCcCccccccccCccccCCccccCccccC point 0 missense GAC->GAG[Asp->Glu] {F13A7.2} 3004 CB6648_redo V 16420522 1 G A 255 1.00 63 62 0 47 47 @AaAAAAaAAAaAAaaaAAaAAAaAAAaaAaaaAAAAAaAAaAaAaAA point 0 SNP none {haw88457} 4613 CB6648_redo V 16460134 1 X X -1000 -999.99 -1000 -1000 11 -7 4 @,,..,.,,,.. indel -1 SNP none {uCE5-2399} 3009 CB6648_redo V 16525299 1 A T 181 5.00 63 62 0 9 9 @TTTTTTTTt point 0 nongenic,nongenic -1831 upstream,-3055 upstream {F36D3.8},{F36D3.13} 3020 CB6648_redo V 16707959 1 T C 9 8.50 63 62 86 98 184 @,C,,C,,CCCC,C..CCCCC,,Cc.cCCC,,cCCCCCCCCC,CCCCCC,CCC.,CCCccCCC,CCCCCCCCC,,C,,CCCCCcCCCCCCCC.C,,.,cC point 0 nongenic -1339 upstream {Y70C5C.2} 3032 CB6648_redo V 16709145 1 G A 14 8.31 0 0 0 44 44 @AAAAaAAAAAAaAAAAAAAAaAAAaAAAAaaAAAAAaAAaAAaa point 0 nongenic -2525 upstream {Y70C5C.2} 3033 CB6648_redo V 16723977 1 T C 255 1.00 63 62 0 32 32 @CCCcCCcCcCcCCCccCCCcCCccCcCcCccc point 0 nongenic,nongenic -160 upstream,-3209 upstream {Y70C5C.6a,Y70C5C.6b},{T25E12.14} 3034 CB6648_redo V 16723993 1 G C 255 1.00 63 62 0 25 25 @CCCcCCccCcCcCcccccccccccc point 0 nongenic,nongenic -176 upstream,-3193 upstream {Y70C5C.6a,Y70C5C.6b},{T25E12.14} 3035 CB6648_redo V 16733914 1 A C 255 1.00 63 62 0 42 42 @CccCcCcCcccCcccCCccCCCCCcCCCcCCCCccCccCCCc point 0 missense,SNP TTT->GTT[Phe->Val],none {T25E12.10},{haw89342,snp_T25E12[1]} 3036 CB6648_redo V 16816476 1 T C 255 1.00 63 62 0 41 41 @CCcCCccccCccCcCcCCCCcCCccCCcCccCcccCCCcCc point 0 nongenic 938 into {T20B3.1} 3037 CB6648_redo V 16874737 1 C G 188 1.00 63 14 1 9 10 @GGggggGGG, point 0 nongenic,nongenic,nongenic -1110 upstream,-3277 upstream,690 into {F49A5.10},{F49A5.6},{F49A5.8} 3040 CB6648_redo V 17040175 1 C A 108 7.00 50 20 0 5 5 @aaaaa point 0 nongenic,nongenic -2386 upstream,-4254 upstream {F28B1.1},{F49H6.11} 3041 CB6648_redo V 17040210 1 T C 125 5.25 63 62 0 4 4 @CCCC point 0 nongenic,nongenic -2351 upstream,-4289 upstream {F28B1.1},{F49H6.11} 3047 CB6648_redo V 17378169 1 G A 255 1.00 63 62 0 45 45 @AAaAAAAAaaAAAaaaaAaaaAaaAaAAaAaaAaAAAAaAAaaaa point 0 SNP none {haw90646} 3048 CB6648_redo V 17385237 1 T C 7 4.94 0 14 11 12 23 @.......CCCCC.Cc..ccC.CC point 0 nongenic -10405 upstream {T27C5.1} 3050 CB6648_redo V 17469462 1 T A 140 1.00 63 46 1 7 8 @aaAaAAA, point 0 nongenic,nongenic,nongenic -241 upstream,728 downstream,902 downstream {F20E11.17},{F08E10.1},{F20E11.6} 3051 CB6648_redo V 17619073 1 C G 255 1.25 63 62 0 41 41 @GGgggGgGGggggGGggGgGGgGgGGgGGGGgGGggggggg point 0 nongenic,nongenic -1088 upstream,-2183 upstream {Y6G8.8},{Y6G8.6} 3055 CB6648_redo V 17738056 1 T C 48 9.44 63 44 0 15 15 @CcCCCCCCCCCCCCC point 0 nongenic,nongenic -7706 upstream,1805 into {W06D12.2},{W06D12.1} 3056 CB6648_redo V 17738078 1 A C 42 7.19 63 32 0 17 17 @CCCCCCCCCCCCCCCCC point 0 nongenic,nongenic -7728 upstream,1783 into {W06D12.2},{W06D12.1} 3057 CB6648_redo V 17738120 1 T C 13 5.81 0 12 0 5 5 @CCCCC point 0 nongenic,nongenic -7770 upstream,1741 into {W06D12.2},{W06D12.1} 3058 CB6648_redo V 17738152 1 T C 12 5.00 0 12 0 4 4 @CCCC point 0 nongenic,nongenic -7802 upstream,1709 into {W06D12.2},{W06D12.1} 3059 CB6648_redo V 17738184 1 T C 41 6.69 35 36 0 14 14 @CCCCCCCCCCCCCC point 0 nongenic,nongenic -7834 upstream,1677 into {W06D12.2},{W06D12.1} 3060 CB6648_redo V 17738206 1 T C 68 7.56 63 30 0 16 16 @CCCCCCCCCCCCCCCC point 0 nongenic,nongenic -7856 upstream,1655 into {W06D12.2},{W06D12.1} 3061 CB6648_redo V 17738238 1 T C 180 7.94 63 62 0 21 21 @CCCCCCCCCCCCCCCCCcCCC point 0 nongenic,nongenic -7888 upstream,1623 into {W06D12.2},{W06D12.1} 3062 CB6648_redo V 17835640 1 G T 255 1.00 63 62 0 50 50 @ttttTTtTTTTtTttTTtTTtTTttttTTTTTttTTttTTtTTtTttttT point 0 SNP none {haw91665} 3063 CB6648_redo V 17867118 1 T G 155 1.56 63 62 0 12 12 @gGggggGggggg point 0 nongenic,nongenic,nongenic -11158 upstream,-4254 upstream,3502 into {Y59A8A.3.1},{Y59A8A.2},{Y59A8A.1} 3064 CB6648_redo V 17867263 1 A G 68 4.06 63 62 6 7 13 @g,G,g,,Gggg,, point 0 nongenic,nongenic,nongenic -11303 upstream,-4109 upstream,3357 into {Y59A8A.3.1},{Y59A8A.2},{Y59A8A.1} 3073 CB6648_redo V 17885927 1 A G 16 2.25 0 16 0 9 9 @GGGGGGGGG point 0 nongenic 3026 into {C06H5.6} 3084 CB6648_redo V 17886212 1 G A 12 1.75 0 12 0 4 4 @aaaa point 0 nongenic 2741 into {C06H5.6} 3087 CB6648_redo V 17898272 1 G A 255 6.00 63 62 0 41 41 @AAAaAAAAAAAaAAAAAAAAaAaaaAAAAAAaAAAAAAAaA point 0 nongenic,nongenic -1517 upstream,-1523 upstream {C06H5.1},{C06H5.2} 3094 CB6648_redo V 17950254 1 T A 255 1.00 63 62 0 34 34 @AAaAaaAAAAAaAAaaAAaAaaAaAAaAaAaAaa point 0 SNP none {haw91922} 3095 CB6648_redo V 17961088 1 T A 255 2.19 63 62 0 42 42 @aAAAaAaaaAAaaAAaaaAaAaAaAAAaAaaaaAAaAAAaAa point 0 nongenic 5728 into {Y59A8B.23a,Y59A8B.23b} 3096 CB6648_redo V 17972070 1 G T 255 1.25 63 62 3 32 35 @,,tT,TtTTTTttTttttTTTTTtTTttttTttTt point 0 nongenic,nongenic,nongenic,nongenic -14154 upstream,-5254 upstream,3512 into,3570 into {Y59A8B.21},{Y59A8B.23a,Y59A8B.23b},{Y59A8B.22.1},{Y59A8B.22.2} 3097 CB6648_redo V 17972080 1 G T 255 1.25 63 62 3 34 37 @T,,tTTT,ttTttttTTTTTtTTttttTttTtttttt point 0 nongenic,nongenic,nongenic,nongenic -14144 upstream,-5264 upstream,3522 into,3580 into {Y59A8B.21},{Y59A8B.23a,Y59A8B.23b},{Y59A8B.22.1},{Y59A8B.22.2} 3098 CB6648_redo V 17975954 1 T A 72 1.69 63 62 3 9 12 @AAAAAaaaa,,. point 0 nongenic,nongenic,nongenic -10270 upstream,-9138 upstream,4096 into {Y59A8B.21},{Y59A8B.23a,Y59A8B.23b},{Y59A8B.22.1,Y59A8B.22.2} 3099 CB6648_redo V 17989158 1 A T 52 1.00 63 62 3 7 10 @,..tTttttt point 0 nongenic,nongenic -9108 upstream,2934 into {Y59A8B.22.1,Y59A8B.22.2},{Y59A8B.21} 3100 CB6648_redo V 17989159 1 T C 108 1.00 63 52 2 7 9 @..cCccccc point 0 nongenic,nongenic -9109 upstream,2935 into {Y59A8B.22.1,Y59A8B.22.2},{Y59A8B.21} 4617 CB6648_redo V 17989160 1 X X -1000 -999.99 -1000 -1000 9 -4 5 @...,..... indel -1 SNP none {uCE5-2743} 3102 CB6648_redo V 18022415 1 G A 255 1.00 63 62 0 83 83 @AAAAaAaaaAaaAAaAaaAAaAAaaAAAAaaAaAAaaAaAaaaAAaaAaaAAaaaaaaAAaAAAAaAaaAaAAaAaAAAAaAA point 0 nongenic,nongenic,nongenic -27 upstream,-29 upstream,-5122 upstream {Y59A8B.6.1},{Y59A8B.6.2},{Y59A8B.4} 160875 CB6648_redo V 18139744 148 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 783 to 931 bp into {Y37H2A.10} 3105 CB6648_redo V 18211054 1 G A 124 3.31 63 22 0 6 6 @aaAaAA point 0 nongenic -2002 upstream {F16H6.7} 3107 CB6648_redo V 18220489 1 G A 255 1.00 63 62 0 37 37 @AaAAAAaAAaaAaaAAaAaAAAaAAAAaAAAAaaaaA point 0 nongenic,nongenic -4247 upstream,1777 into {F16H6.8},{F16H6.9} 3108 CB6648_redo V 18314059 1 G A 65 1.00 63 40 1 4 5 @,AAaA point 0 nongenic,nongenic -4501 upstream,-8521 upstream {B0462.3},{Y51A2A.7} 3109 CB6648_redo V 18314060 1 A C 79 1.00 63 62 1 5 6 @,CCcCC point 0 nongenic,nongenic -4500 upstream,-8522 upstream {B0462.3},{Y51A2A.7} 3116 CB6648_redo V 18465979 1 G A 18 1.00 63 0 0 4 4 @aaaa point 0 nongenic 692 downstream {ZK228.4a,ZK228.4b} 3117 CB6648_redo V 18465992 1 G A 211 1.81 63 62 0 11 11 @aaaaAAAaaaa point 0 nongenic 705 downstream {ZK228.4a,ZK228.4b} 3118 CB6648_redo V 18465993 1 T G 201 1.81 63 62 0 11 11 @ggggGGGgggg point 0 nongenic 706 downstream {ZK228.4a,ZK228.4b} 3120 CB6648_redo V 18537035 1 C T 107 1.00 63 16 0 6 6 @TTtttT point 0 nongenic 3116 into {Y51A2D.7a,Y51A2D.7b} 3121 CB6648_redo V 18537037 1 G C 31 1.00 63 16 0 4 4 @cccC point 0 nongenic 3118 into {Y51A2D.7a,Y51A2D.7b} 3124 CB6648_redo V 18537057 1 A G 182 1.00 63 62 0 7 7 @GGggggG point 0 nongenic 3138 into {Y51A2D.7a,Y51A2D.7b} 3125 CB6648_redo V 18537058 1 G A 149 1.25 63 62 0 8 8 @AAaataAA point 0 nongenic 3139 into {Y51A2D.7a,Y51A2D.7b} 3128 CB6648_redo V 18656480 1 T C 255 1.00 63 62 1 32 33 @CCcCCCCcccCccCccccCcCccCCccccCCc. point 0 nongenic,nongenic,nongenic 324 into,348 downstream,408 into {Y69H2.3c},{Y69H2.12},{Y69H2.3b} 3142 CB6648_redo V 18683437 1 G T 19 5.00 0 16 0 6 6 @TTTttt point 0 nongenic 890 into {Y69H2.10b} 3143 CB6648_redo V 18720594 1 T A 255 1.00 63 62 0 18 18 @aAaAaaaaaaAAAaaaAa point 0 nongenic -770 upstream {Y17D7C.2} 3144 CB6648_redo V 18858714 1 C T 255 1.06 63 62 0 25 25 @tttttTttttttTtTTTtTttTTtt point 0 SNP none {haw93705} 3146 CB6648_redo V 18883478 1 C A 65 6.06 63 62 13 23 36 @,,,a,Aa.A,A,,aAAaaAa.A,,AaAAAAAaA,.A point 0 nongenic,nongenic 11462 into,11463 into {Y80D3A.2.2},{Y80D3A.2.1} 3147 CB6648_redo V 18883481 1 A G 65 6.38 63 62 11 25 36 @,g,Gg.G,G,,gGGggGg.G,,GgGGGGGgG,.GGG point 0 nongenic,nongenic 11459 into,11460 into {Y80D3A.2.2},{Y80D3A.2.1} 3149 CB6648_redo V 18941842 1 A C 255 2.00 63 62 2 39 41 @cCCcc,cCcCCccCcCcCc,ccCccccccCCCcCcCCCCCC point 0 missense GAA->GCA[Glu->Ala] {Y80D3A.8} 3152 CB6648_redo V 18959114 1 A G 156 6.62 50 62 0 14 14 @ggggGgggGggggg point 0 nongenic,nongenic -1842 upstream,910 into {Y80D3A.9},{Y39B6A.46} 3153 CB6648_redo V 18959149 1 A G 255 8.12 63 62 0 35 35 @gggggggGggGgGGGggggggGGGGgggggggggg point 0 nongenic,nongenic -1877 upstream,945 into {Y80D3A.9},{Y39B6A.46} 3154 CB6648_redo V 18959246 1 A T 106 8.62 63 62 6 25 31 @.t.ttT.T..,TTTTTTTTtTTTTTTTTTTt point 0 nongenic,nongenic -1974 upstream,892 into {Y80D3A.9},{Y39B6A.46} 3156 CB6648_redo V 18959251 1 A G 138 9.50 63 62 5 22 27 @.G..,GGGGGGGG.GGGGGGGGGGtgg point 0 nongenic,nongenic -1979 upstream,887 into {Y80D3A.9},{Y39B6A.46} 3157 CB6648_redo V 18959538 1 C T 255 1.00 63 62 0 32 32 @TtTttttTtTtTTttttttttttttttttttt point 0 missense GAA->AAA[Glu->Lys] {Y39B6A.46} 3158 CB6648_redo V 18962810 1 C T 228 1.00 63 62 0 9 9 @TTttTTttt point 0 nongenic,nongenic -2672 upstream,1745 into {Y39B6A.46},{Y39B6A.43a,Y39B6A.43b} 3159 CB6648_redo V 18962825 1 C T 126 1.00 63 2 0 4 4 @TTTT point 0 nongenic,nongenic -2687 upstream,1760 into {Y39B6A.46},{Y39B6A.43a,Y39B6A.43b} 3160 CB6648_redo V 18962826 1 T G 139 1.19 63 2 0 6 6 @GGGGGg point 0 nongenic,nongenic -2688 upstream,1761 into {Y39B6A.46},{Y39B6A.43a,Y39B6A.43b} 3161 CB6648_redo V 18965154 1 T A 255 1.00 63 62 0 44 44 @aaaAAaAAAaAAAAaaaaAAaaAAaAAaaAaAaaaAAAaaAaaa point 0 SNP none {haw94014} 3167 CB6648_redo V 19052087 1 T C 255 1.00 63 62 0 32 32 @cCCcCcCcccCcccccccccCcccccCccccc point 0 SNP none {haw94226} 3171 CB6648_redo V 19119922 1 T C 230 8.38 63 62 0 25 25 @ccccccccccccccccccccccccc point 0 nongenic,nongenic,nongenic,nongenic -589 upstream,-7572 upstream,335 into,368 into {Y39B6A.13},{Y39B6A.11},{Y39B6A.12b},{Y39B6A.12a} 3172 CB6648_redo V 19187353 1 T C 255 1.00 63 62 0 17 17 @CCCCCcccccCCcCccc point 0 nongenic 512 into {Y39B6A.48} 3175 CB6648_redo V 19362470 1 T C 255 1.00 63 62 0 44 44 @cCCcCcccCCcCcccCcCCcCCcccCccCCCCCcccccCCcccc point 0 nongenic,nongenic -13017 upstream,-8096 upstream {C14B4.2},{Y43F8A.1} 3179 CB6648_redo V 19499424 1 G C 183 1.00 63 62 0 7 7 @cccCccc point 0 nongenic,nongenic -3651 upstream,-3772 upstream {Y43F8B.3a,Y43F8B.3b},{Y43F8B.5} 3180 CB6648_redo V 19506793 1 T A 255 1.00 63 62 0 12 12 @AAaAaAAAAaaA point 0 nongenic,nongenic -11141 upstream,3718 into {Y43F8B.5},{Y43F8B.3a,Y43F8B.3b} 3181 CB6648_redo V 19649737 1 G A 255 1.00 63 62 0 24 24 @AaAAaaaAAAAaAaaaAaaaaaAa point 0 nongenic 664 downstream {Y43F8C.10} 3197 CB6648_redo V 19754364 1 A T 9 1.00 63 46 3 3 6 @,.,TtT point 0 nongenic,nongenic,nongenic -2152 upstream,-3187 upstream,964 into {W04E12.9},{W04E12.6},{W04E12.8} 3198 CB6648_redo V 19816962 1 C T 255 1.06 63 62 0 45 45 @TTTtttTttTTTtTtTtttttttTtTTTtTttTTTtTtttttTtt point 0 SNP none {haw96009} 3199 CB6648_redo V 19828951 1 T C 255 1.00 63 62 0 34 34 @CccCcCCCccCCCccccccCCccccCcCCCccCC point 0 silent CAA->CAG[Gln->Gln] {Y116F11B.3.1,Y116F11B.3.2} 3200 CB6648_redo V 19862667 1 A C 255 1.00 63 62 0 21 21 @CCCCCCcCCccCcccCCCCcC point 0 ncRNA,SNP none,none {Y116F11B.9b},{haw96106} 3201 CB6648_redo V 19868214 1 C G 255 1.00 63 62 0 33 33 @ggGGggGggGGgGGgggGGGgGGggGGggGGGG point 0 nongenic,nongenic -267 upstream,-9969 upstream {Y116F11B.9a},{Y116F11B.11} 3206 CB6648_redo V 20122792 1 A G 42 1.00 63 22 0 4 4 @GGGG point 0 nongenic -2155 upstream {Y113G7A.4a} 3207 CB6648_redo V 20308943 1 C T 255 1.06 63 62 0 32 32 @TtTTtttTTtTttTtttTttTTTTtTtttttt point 0 nongenic,nongenic -1755 upstream,60 downstream {ZC15.10},{ZC15.1} 3209 CB6648_redo V 20337877 1 C T 255 1.00 63 62 0 30 30 @tTTTttTtttttTtttTtTTtTTttTttTt point 0 SNP none {haw97199} 3210 CB6648_redo V 20384799 1 C T 255 1.00 63 62 0 38 38 @TtTTTTtTTTTTTTTtTttTTTTTtTTTtTTttTtTTt point 0 missense CGG->CAG[Arg->Gln] {K02E2.7} 3214 CB6648_redo V 20508851 1 C A 255 1.00 63 62 0 51 51 @AAAaAAAAAaAAAAaAaAAaaAAAAaAaaaaAaAAaaAaAAaaAAaAAAaA point 0 nongenic,nongenic,nongenic -3790 upstream,-5877 upstream,1120 into {Y38H6C.4},{Y38H6C.8},{Y38H6C.5} 3215 CB6648_redo V 20550701 1 C T 255 1.00 63 62 0 41 41 @tTtTttTttTttTTtTttTTTtTTtTttTTtttTttTtttT point 0 nongenic,nongenic -3589 upstream,427 into {Y38H6C.18},{Y38H6C.20} 3216 CB6648_redo V 20730251 1 T G 255 1.00 63 62 0 17 17 @GGGGggGGGgGgggGgg point 0 missense AAT->ACT[Asn->Thr] {W07A8.3.1,W07A8.3.2} 3224 CB6648_redo X 5703 1 A T 169 1.19 63 40 0 6 6 @ttTTtt point 0 missense ATT->TTT[Ile->Phe] {CE7X_3.1} 3228 CB6648_redo X 106540 1 T A 4 2.56 0 24 8 15 23 @.A.aAA.AaA.aA,aaAa..A,a point 0 nongenic,nongenic -1777 upstream,430 downstream {Y73B3A.4},{Y73B3A.5} 3229 CB6648_redo X 106668 1 G T 23 3.75 63 38 4 5 9 @Ttt.t.T.. point 0 nongenic,nongenic -1905 upstream,302 downstream {Y73B3A.4},{Y73B3A.5} 3230 CB6648_redo X 106701 1 A G 208 2.25 50 62 3 13 16 @...ggGgggGGgGgGg point 0 nongenic,nongenic -1938 upstream,269 downstream {Y73B3A.4},{Y73B3A.5} 3231 CB6648_redo X 161175 1 G T 255 6.62 63 62 0 52 52 @TTtttttTtttttttttTttTTtTtTtttttTTTtttTtTtttTtttttTtt point 0 nongenic -3814 upstream {Y73B3A.10} 3232 CB6648_redo X 187274 1 C G 255 1.00 63 62 0 59 59 @GGgGggGGgGGGGGGgGGggGggggGGggGggGggGgGgGGGGGggGgGGggGgGGGGg point 0 SNP none {haw98538} 3233 CB6648_redo X 289841 1 G C 255 5.12 63 62 2 24 26 @CcCCCCCCcCCcCCCCcccccc,c,c point 0 nongenic,nongenic -3316 upstream,-7406 upstream {Y47C4A.1},{R57.2} 3234 CB6648_redo X 289852 1 G C 255 7.56 63 62 4 29 33 @CCcCCcCCCCcccccc,c,c,CccCcc.CcccC point 0 nongenic,nongenic -3327 upstream,-7395 upstream {Y47C4A.1},{R57.2} 3240 CB6648_redo X 299633 1 T A 255 1.00 63 62 0 31 31 @aAAAAAaaaAAAaaaaaaAaAaaaaAaaAAa point 0 SNP none {haw98564} 3241 CB6648_redo X 320955 1 T G 105 1.81 63 62 1 6 7 @ggggGG. point 0 nongenic,nongenic -1567 upstream,-9631 upstream {M02E1.3},{M02E1.2} 3242 CB6648_redo X 320956 1 C T 94 2.31 63 62 1 4 5 @ttTT. point 0 nongenic,nongenic -1566 upstream,-9632 upstream {M02E1.3},{M02E1.2} 3245 CB6648_redo X 341454 1 G C 255 1.00 63 62 0 22 22 @cCcccccCccCCCCCccccCcC point 0 nongenic -221 upstream {C04E7.4} 3246 CB6648_redo X 346995 1 G T 201 1.31 63 62 0 7 7 @tTttTtt point 0 nongenic,nongenic -6624 upstream,-705 upstream {C04E7.2},{C04E7.3} 3247 CB6648_redo X 347000 1 G T 166 1.00 63 40 0 5 5 @ttTtt point 0 nongenic,nongenic -6619 upstream,-710 upstream {C04E7.2},{C04E7.3} 3249 CB6648_redo X 347042 1 G T 193 1.00 63 62 0 8 8 @ttttTtTt point 0 nongenic,nongenic -6577 upstream,-752 upstream {C04E7.2},{C04E7.3} 3250 CB6648_redo X 348115 1 C A 255 1.00 63 62 0 36 36 @AaaaaaAaaAaaaAaaaAAAAaAAaAAAaAaAAAaa point 0 SNP none {haw98580} 3254 CB6648_redo X 365026 1 T G 74 1.00 63 62 1 3 4 @ggG. point 0 nongenic -7209 upstream {R04A9.2} 3255 CB6648_redo X 379726 1 G C 168 8.56 63 8 2 10 12 @CCcccCCcCc,. point 0 nongenic 844 into {R04A9.3} 3256 CB6648_redo X 379727 1 A G 102 7.38 63 8 5 9 14 @GGgggG,gGg,.,, point 0 nongenic 843 into {R04A9.3} 3257 CB6648_redo X 382890 1 C G 255 1.00 63 62 0 29 29 @GGgGggGgGggGGgggGGGgggGGGgggG point 0 nongenic -179 upstream {R04A9.4} 3258 CB6648_redo X 424545 1 T C 255 1.94 63 62 0 48 48 @cccCCcCcccCCcCcccCccCcccccCcCCccCcCCcCCCCCcCcccC point 0 nongenic 1240 into {ZK1193.4} 3259 CB6648_redo X 424576 1 T C 255 2.12 63 62 0 44 44 @CccCcCCcCCCCCcCcccCCCCcCCcCCCCccccccCcCCccCc point 0 SNP none {haw98625} 3260 CB6648_redo X 424587 1 T C 255 1.75 63 62 0 40 40 @CcccCCCCcCCcCCCCccccccCcCCccCccccCcCCcCC point 0 SNP none {haw98626} 3261 CB6648_redo X 424629 1 T C 255 1.00 63 62 0 35 35 @CcCCcCCcCCcccCccccccccCcccccccCcCCC point 0 nongenic 1324 into {ZK1193.4} 3262 CB6648_redo X 424765 1 G T 255 4.50 63 62 0 58 58 @TtTtTTtTtttTTTTTtTTTTtTTTttttTTtttttTtTTTTtTtTtTTTTTTtTTTt point 0 SNP none {haw98627} 3263 CB6648_redo X 425164 1 T C 42 1.00 63 2 0 4 4 @cccg point 0 nongenic 1240 into {ZK1193.4} 160880 CB6648_redo X 425408 53 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 943 to 996 bp into {ZK1193.4} 3272 CB6648_redo X 425547 1 C G 255 1.00 63 62 0 34 34 @GGGGGGGGGgGGGGgGGGGGggGgGggGGGgGGg point 0 nongenic 857 into {ZK1193.4} 3273 CB6648_redo X 443404 1 C G 201 3.50 38 62 0 14 14 @GgGgGggggggggg point 0 nongenic -9602 upstream {ZK1193.5a,ZK1193.5b} 3274 CB6648_redo X 486102 1 A G 255 1.00 63 62 0 55 55 @GGGGggGGGGgGggGGGgGgGggggGgGGGgGgGGGGGGgggGGgggGggGGGGg point 0 SNP none {haw98666} 3275 CB6648_redo X 488781 1 A C 255 9.25 63 62 0 21 21 @GccCCccccccCCcccCcCcC point 0 nongenic -915 upstream {F38G1.2} 3276 CB6648_redo X 488806 1 G T 255 2.31 63 62 0 23 23 @TtttTtTtTttTttttttTTtTt point 0 SNP none {haw98668} 3277 CB6648_redo X 491245 1 T C 33 1.00 63 62 5 8 13 @,.,,.cCccCCCC point 0 nongenic,nongenic -1992 upstream,1031 into {B0310.1b},{F38G1.2} 3278 CB6648_redo X 491868 1 C A 255 1.00 63 62 0 37 37 @aaAAaaAaAAAAAaaaAAAAAAAAaAAaAaAAaAaaa point 0 SNP none {haw98673} 3291 CB6648_redo X 538182 1 A G 211 1.06 63 62 0 13 13 @ggggggggggggg point 0 nongenic,nongenic,nongenic -2345 upstream,-4926 upstream,996 into {F28C10.3},{F28C10.1},{F28C10.4} 3294 CB6648_redo X 817619 1 A T 255 1.00 63 62 0 32 32 @TTTTTTTtTTtTTtTtTtTttTttTTtTTTtT point 0 SNP none {haw98919} 4634 CB6648_redo X 872120 0 X X -1000 -999.99 -1000 -1000 2 2 4 @.,ggG indel 0 nongenic,nongenic,nongenic -1040 upstream,-396 upstream,-482 upstream {F56F10.4},{F56F10.1.1},{F56F10.1.2} 3296 CB6648_redo X 1017350 1 T A 255 1.00 63 62 0 33 33 @aaaaaaaAaaAAAaaaaaaAaaAaAaaaaAaaa point 0 missense AAC->ATC[Asn->Ile] {F55A4.2} 3297 CB6648_redo X 1047732 1 C T 255 1.00 63 62 0 50 50 @TTtTTTtTTTttTTTtttTtTttTTttTttTTTTTTtTtttTttttttTt point 0 nongenic,nongenic -1527 upstream,-6479 upstream {F55A4.8a},{K03E6.3} 3298 CB6648_redo X 1073732 1 G T 255 1.00 63 62 0 37 37 @tTttTTTttTtTTTtttTtTTTtttttttTtTTtTTT point 0 SNP none {haw99047} 3299 CB6648_redo X 1133524 1 T A 255 1.00 63 62 0 36 36 @AaAAaAAaaaAAaaAAAAAAAaAAAaAAAAAAaaaA point 0 SNP none {haw99081} 3300 CB6648_redo X 1133556 1 T A 255 1.00 63 62 0 36 36 @AAaAAAaAAAAAAaaaAAAaaAaaaaaaAAaAAaaa point 0 SNP none {haw99082} 3302 CB6648_redo X 1198526 1 A G 11 1.00 63 62 7 7 14 @,.,,.,,GgGGGgg point 0 nongenic -47 upstream {T13G4.5} 3304 CB6648_redo X 1226077 1 G C 207 1.00 63 62 0 8 8 @ccccCccc point 0 SNP none {haw99127} 3305 CB6648_redo X 1239148 1 C T 255 1.00 63 62 0 37 37 @tTtttTTtttTTtTTTTtTttttttTtTttttTttTt point 0 SNP none {haw99128} 3306 CB6648_redo X 1294827 1 C G 255 1.00 63 62 0 38 38 @gGgGGgGGGGGGGGGGGGGgGgGGggGGggGGGGgGGG point 0 nongenic -446 upstream {C52B11.3} 3307 CB6648_redo X 1308534 1 C A 255 1.00 63 62 0 28 28 @aAaaAaaAaaaaAaaaAaaaAAAAaaAa point 0 SNP none {haw99198} 3308 CB6648_redo X 1333863 1 A C 208 1.00 63 62 0 8 8 @CcccCCCC point 0 SNP none {haw99214} 3309 CB6648_redo X 1472305 1 G T 255 1.00 63 62 0 40 40 @tttTtttTTtTttttTttttttTTTtttttTtTTttTTTT point 0 SNP none {haw99409} 3313 CB6648_redo X 1519786 1 C A 216 1.00 63 62 0 8 8 @AAAAaAAA point 0 nongenic 1698 into {F09E10.8a,F09E10.8b} 3314 CB6648_redo X 1519787 1 C A 217 1.00 63 62 0 9 9 @AAAAaAAAA point 0 nongenic 1697 into {F09E10.8a,F09E10.8b} 3315 CB6648_redo X 1604340 1 G T 161 1.00 63 62 0 6 6 @tttttt point 0 nongenic -561 upstream {H11E01.3} 3317 CB6648_redo X 1615121 1 C A 36 1.00 63 0 0 4 4 @AAaa point 0 silent CCC->CCA[Pro->Pro] {H11E01.3} 3321 CB6648_redo X 1615136 1 C T 143 1.00 63 0 0 5 5 @TtttT point 0 silent TTC->TTT[Phe->Phe] {H11E01.3} 3331 CB6648_redo X 1717742 1 C A 255 1.00 63 62 0 24 24 @AAaaaaaAaAAaAAaAAaAAaAAA point 0 SNP none {haw99773} 3337 CB6648_redo X 1884561 1 T A 3 5.75 0 2 10 16 26 @,AAAAaA,aA.AaaAAAAA,,..,.. point 0 nongenic -7620 upstream {B0294.3} 3341 CB6648_redo X 1885828 1 C T 3 6.62 0 0 11 50 61 @ttttt.ttttttttTT,TTttTTt.tttTttTtt.tttTt,.TttTttTtT,t,.,Tttt. point 0 nongenic -6353 upstream {B0294.3} 3347 CB6648_redo X 2122994 1 A T 255 1.00 63 62 0 42 42 @TtTTtttttttttTtTTtttttTTTTTTTttTTTTTTTTTTT point 0 nongenic,nongenic -1937 upstream,417 downstream {F53B1.7},{F53B1.8} 3348 CB6648_redo X 2165879 1 A G 59 1.00 63 62 1 4 5 @GGGg. point 0 silent GTA->GTG[Val->Val] {F48B9.3} 3349 CB6648_redo X 2370397 1 A C 180 1.00 63 62 0 8 8 @CcCCCCCc point 0 nongenic,nongenic -4460 upstream,-5594 upstream {T24D8.6},{F47G3.3} 3350 CB6648_redo X 2370398 1 C A 166 1.00 63 62 0 6 6 @AAAAAa point 0 nongenic,nongenic -4461 upstream,-5593 upstream {T24D8.6},{F47G3.3} 3354 CB6648_redo X 2428302 1 T C 35 0.00 63 34 0 4 4 @cccC point 0 nongenic,nongenic -802 upstream,-851 upstream {T07D1.1a,T07D1.1b},{T07D1.1c} 3355 CB6648_redo X 2428303 1 C T 35 0.00 63 34 0 4 4 @tttT point 0 nongenic,nongenic -803 upstream,-852 upstream {T07D1.1a,T07D1.1b},{T07D1.1c} 3359 CB6648_redo X 2522234 1 C A 129 1.00 63 56 3 7 10 @aAAaaaA,,, point 0 nongenic -6922 upstream {K02E10.8a,K02E10.8b} 3360 CB6648_redo X 2522237 1 A T 57 1.00 63 62 4 6 10 @TTtttT,,,. point 0 nongenic -6925 upstream {K02E10.8a,K02E10.8b} 3363 CB6648_redo X 2826263 1 A T 69 1.00 63 62 4 7 11 @,,..ttTTttt point 0 nongenic,nongenic -12143 upstream,559 into {C14A11.6},{C14A11.7} 4647 CB6648_redo X 2893761 0 X X -1000 -999.99 -1000 -1000 6 -1 5 @,,.,,.aAAa indel 0 nongenic,nongenic,nongenic -1213 downstream,-2275 upstream,-805 upstream {F52B10.3},{B0410.3},{B0410.1} 3364 CB6648_redo X 2894432 1 A T 255 3.38 63 62 0 36 36 @TTTTtTTtTTTTTTTTtttTtTtTTTTTtTTTTttt point 0 SNP none {snp_B0410[1]} 3365 CB6648_redo X 2899577 1 G C 26 1.00 63 18 1 4 5 @CCcC, point 0 nongenic,nongenic -1367 upstream,-9970 upstream {F52B10.3},{F52B10.1} 3366 CB6648_redo X 2899578 1 C G 18 1.00 63 26 1 3 4 @GgG, point 0 nongenic,nongenic -1368 upstream,-9969 upstream {F52B10.3},{F52B10.1} 4649 CB6648_redo X 3007736 0 X X -1000 -999.99 -1000 -1000 49 -45 4 @,......,,,,,,,,....,......,,,,...,.....,,,.......tt indel 5 nongenic,nongenic -1755 upstream,-3940 upstream {Y48D7A.1},{Y41G9A.6} 3372 CB6648_redo X 3027787 1 C G 255 2.31 63 62 0 36 36 @GGgGGgggGGggGGggggGggGGGggggGggggggg point 0 SNP none {haw101125} 3373 CB6648_redo X 3102869 1 A C 84 1.00 63 52 0 6 6 @CCccCC point 0 nongenic,nongenic -644 upstream,372 downstream {F52E4.8},{K10B3.5} 3374 CB6648_redo X 3158187 1 C T 127 1.00 63 10 0 5 5 @TtTTt point 0 nongenic,nongenic -1742 upstream,-5733 upstream {C15C7.2.1},{C15C7.5} 3375 CB6648_redo X 3158207 1 C A 255 1.00 63 62 0 14 14 @AAaaAaAAAAAAAA point 0 nongenic,nongenic -1722 upstream,-5753 upstream {C15C7.2.1},{C15C7.5} 3378 CB6648_redo X 3207501 1 C T 96 2.38 63 62 0 5 5 @Ttttt point 0 nongenic 692 into {F28B4.4} 3384 CB6648_redo X 3225118 1 T G 189 1.00 63 62 0 7 7 @GggGGGG point 0 nongenic -4758 upstream {F28B4.2a} 3385 CB6648_redo X 3237694 1 A G 255 1.00 63 62 0 49 49 @gGGggGggggGGgGgggGGGGgggGGggGGgggGGGggGGggGGGggGg point 0 missense,SNP TTT->TCT[Phe->Ser],none {F40F4.6},{haw101350} 4652 CB6648_redo X 3293918 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @,,.,,.tTT indel 0 nongenic -3728 upstream {K09C4.2} 3386 CB6648_redo X 3367002 1 C G 255 1.00 63 62 0 38 38 @gggGggGgggGggGGgGGgGGggGgGGgGGGGgggggg point 0 nongenic,nongenic -1945 upstream,-4519 upstream {ZK563.2},{ZK816.5} 3387 CB6648_redo X 3367003 1 G C 255 1.00 63 62 0 39 39 @cccCccCcccCccCCcCCcCCccCcCCcCCCCccccccc point 0 nongenic,nongenic -1944 upstream,-4520 upstream {ZK563.2},{ZK816.5} 4654 CB6648_redo X 3376415 0 X X -1000 -999.99 -1000 -1000 3 1 4 @..,GGgg indel 0 nongenic,nongenic -1685 upstream,774 downstream {ZK563.4a,ZK563.4b},{ZK563.5} 3388 CB6648_redo X 3408399 1 T C 255 1.81 63 62 0 35 35 @cCcCCCCcCcCCCCCccCcCCCccCCcCcCcCcCC point 0 silent ATT->ATC[Ile->Ile] {C04F6.1.1,C04F6.1.2,C04F6.1.3} 3389 CB6648_redo X 3520397 1 C G 89 1.00 63 62 0 6 6 @GAggGG point 0 nongenic,nongenic -14043 upstream,-8402 upstream {C12D12.5},{F56B6.5a,F56B6.5b} 3390 CB6648_redo X 3631398 1 C G 11 2.75 63 62 12 15 27 @gGGGgggGaG,,,,,,,g,,A,,Ga,G point 0 nongenic 525 downstream {C18B2.1} 3391 CB6648_redo X 3631566 1 G A 35 2.75 63 62 46 75 121 @,..,,a.,AA.,...A,,.A,.,,,..,,.,,.,,.,,,,,a,A,,a,.a,aaaaAAAAaaAAAAAAAaaaAAAAAAaAAAAAaaAAAAAAAAAAaaaa point 0 nongenic,nongenic 693 downstream,976 downstream {C18B2.1},{R11G1.3} 3392 CB6648_redo X 3631690 1 C G 44 3.62 63 62 102 137 239 @g.,,,,,,,.,GG,,,g.,G,.,,,,.g,,,G,,Gg,G,,g,,,,,,GGGG,,G.g,G,GgG,,gg,,g.GG,G,G.GG,,,gGGGGg.GGGGgGGgGg point 0 SNP none {haw101541} 3393 CB6648_redo X 3631792 1 G T 168 1.06 63 62 32 135 167 @.,ttT,tttttttTTTTTtt.tttTttTTttT,TTtttttTTt.T,TttTTTTttttttt.TTttTtttTTtttTtT,t,,,Ttt,tt,.tt,,tt.tt point 0 SNP none {haw101542} 3394 CB6648_redo X 3653458 1 T C 255 1.00 63 62 0 21 21 @cCCCCCCcCCCCCCCCCCCCc point 0 SNP none {haw101553} 3401 CB6648_redo X 3796657 1 T C 15 1.00 63 38 1 6 7 @C,ccccc point 0 nongenic,nongenic -1276 upstream,-1506 upstream {F35A5.5},{F35A5.3} 3402 CB6648_redo X 3811996 1 T G 161 1.69 63 62 6 6 12 @ggGgGg..,,., point 0 nongenic 4398 into {F35A5.1} 3404 CB6648_redo X 3812199 1 A G 36 1.38 63 62 10 10 20 @.gGg...GG..G,.GGg.g. point 0 nongenic 4195 into {F35A5.1} 3405 CB6648_redo X 3882478 1 T C 22 1.00 63 52 1 9 10 @CCCc.ccccc point 0 nongenic,nongenic -1690 upstream,-9201 upstream {F47F2.1b},{ZC64.4} 3407 CB6648_redo X 3902119 1 A C 134 1.00 63 62 0 6 6 @cccccc point 0 nongenic,nongenic -2451 upstream,-6460 upstream {T22B2.4a},{F47F2.3} 3408 CB6648_redo X 3903048 1 T C 181 1.00 63 62 0 6 6 @ccCCCc point 0 nongenic,nongenic -1522 upstream,-7389 upstream {T22B2.4a},{F47F2.3} 3409 CB6648_redo X 3924055 1 A G 255 1.00 63 62 0 29 29 @GggGGgggGgGGGgggGGgggggggGGgg point 0 nongenic,nongenic -2005 upstream,841 downstream {T22B2.1},{T22B2.2} 3410 CB6648_redo X 4025107 1 A G 255 1.00 63 62 0 33 33 @GGgGgGGgGgggGGggGGGgGGGGggGGGgGGG point 0 silent AAA->AAG[Lys->Lys] {R02E12.8} 3449 CB6648_redo X 4241735 1 A C 255 1.38 63 62 0 29 29 @cccccCccCCcccCCcccCcCCcCcCCcc point 0 SNP none {haw101997} 3450 CB6648_redo X 4241797 1 A G 107 2.00 63 62 3 4 7 @...gggg point 0 nongenic -5974 upstream {W01H2.3a} 3452 CB6648_redo X 4241827 1 T C 176 1.69 40 62 0 20 20 @CcccCCCCCcCCCcccCCCc point 0 nongenic -6004 upstream {W01H2.3a} 3453 CB6648_redo X 4241867 1 G T 188 2.81 40 62 27 40 67 @,,,ttt,,Tt,tttt,,,tttt.t,tTT,ttt,,T,TT,tTtTt,T,tT,,T,,,,,T,tTttT,tT point 0 nongenic -6044 upstream {W01H2.3a} 3454 CB6648_redo X 4241902 1 T C 15 3.12 1 2 0 32 32 @CcCccCCcCCCCCCCCCCCCCCCCCCCCCCcC point 0 nongenic -6079 upstream {W01H2.3a} 3455 CB6648_redo X 4241950 1 A G 20 2.12 37 16 0 7 7 @GgGgGgg point 0 nongenic -6127 upstream {W01H2.3a} 3457 CB6648_redo X 4242071 1 T C 179 2.88 63 62 0 18 18 @CCCcCCcCcCCccccccc point 0 nongenic -6248 upstream {W01H2.3a} 3458 CB6648_redo X 4242094 1 G A 90 3.00 63 62 0 8 8 @aaaAAAAA point 0 nongenic -6271 upstream {W01H2.3a} 3459 CB6648_redo X 4242110 1 A C 64 2.12 50 62 2 8 10 @CCCCCCc,,C point 0 nongenic -6287 upstream {W01H2.3a} 4668 CB6648_redo X 4512910 0 X X -1000 -999.99 -1000 -1000 3 1 4 @,,.GGg indel 0 nongenic -1161 upstream {C07A12.5a,C07A12.5b} 3462 CB6648_redo X 4513922 1 C T 255 1.00 63 62 0 22 22 @tttttTttttttttttTTtTtT point 0 SNP none {snp_F46H6[6]} 4670 CB6648_redo X 4550017 0 X X -1000 -999.99 -1000 -1000 4 0 4 @.,.,cc indel 1 nongenic -4648 upstream {C07A12.1b} 3463 CB6648_redo X 4550018 1 A C 12 1.00 63 62 0 6 6 @CcCggG point 0 nongenic -4646 upstream {C07A12.1b} 3464 CB6648_redo X 4556553 1 T G 28 1.00 63 62 3 3 6 @...GGg point 0 nongenic,nongenic,nongenic -555 upstream,1888 into,1889 into {C07A12.1c},{C07A12.1a},{C07A12.1b} 3465 CB6648_redo X 4556555 1 G T 130 1.00 63 28 2 7 9 @..TTtTTTt point 0 nongenic,nongenic,nongenic -553 upstream,1890 into,1891 into {C07A12.1c},{C07A12.1a},{C07A12.1b} 3469 CB6648_redo X 4577121 1 T G 79 1.00 63 26 1 4 5 @ggGg, point 0 nongenic -2357 upstream {C05E11.3} 3470 CB6648_redo X 4577179 1 A T 255 1.00 63 62 0 39 39 @TtttTtTTtttttttttttTTtTtTTTtTTTtTTTtTTt point 0 SNP none {haw102400} 3471 CB6648_redo X 4578097 1 T C 255 1.00 63 62 0 35 35 @CcCCCcCccCCcccccCCcccCCCcCCcCCCccCc point 0 nongenic -1381 upstream {C05E11.3} 4672 CB6648_redo X 4603454 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @....,Cc indel 0 inframe none {T13H2.5a} 3478 CB6648_redo X 4971580 1 C T 255 1.00 63 62 0 40 40 @tttttTttTTTtTtttTtTttTttttttTtTTTttTtTtT point 0 nongenic,nongenic,nongenic -699 upstream,-715 upstream,989 downstream {M03F4.7a},{M03F4.7b},{ZC8.6} 3479 CB6648_redo X 4971581 1 A C 255 1.00 63 62 0 40 40 @cccccCccCCCcCcccCcCccCccccccCcCCCccCcCcC point 0 nongenic,nongenic,nongenic -700 upstream,-716 upstream,988 downstream {M03F4.7a},{M03F4.7b},{ZC8.6} 3484 CB6648_redo X 5123322 1 T G 255 1.00 63 62 1 55 56 @gggGgGggGGGGgggggGgGgG.GggggGgggggGgGGggggGggGGggGgGGGGg point 0 nongenic,nongenic -15637 upstream,-6482 upstream {C31H2.1a,C31H2.1b},{C42D8.8b.1} 3485 CB6648_redo X 5134151 1 C G 255 1.00 63 62 0 41 41 @GgGgggGgggGgGggggGgggggGggGggGggggGGGgGgg point 0 nongenic,nongenic -17311 upstream,-4808 upstream {C42D8.8b.1},{C31H2.1a,C31H2.1b} 3486 CB6648_redo X 5134152 1 G C 255 1.00 63 62 0 43 43 @cCcccCcccCcCccccCcccccCccCccCccccCCCcCccCcc point 0 nongenic,nongenic -17312 upstream,-4807 upstream {C42D8.8b.1},{C31H2.1a,C31H2.1b} 3488 CB6648_redo X 5195550 1 G C 67 1.00 63 20 1 7 8 @CCCcccC. point 0 nongenic,nongenic -2201 upstream,-6541 upstream {T03G11.1},{T03G11.8} 3494 CB6648_redo X 5432160 1 T C 255 1.00 63 62 0 42 42 @CCCcccCcCCCCCcccccCccCcCCccCccccCCcCcCcCcc point 0 missense GTC->GCC[Val->Ala] {C41A3.1} 4680 CB6648_redo X 5508058 4 X X -1000 -999.99 -1000 -1000 12 -11 1 @,..,,..,,.., indel -4 SNP none {uCE6-931} 3496 CB6648_redo X 5526944 1 A C 32 1.00 63 36 3 5 8 @cCccC,., point 0 missense TGT->GGT[Cys->Gly] {C54G7.3a} 3497 CB6648_redo X 5819246 1 G C 13 1.00 63 10 1 3 4 @,cCC point 0 nongenic,nongenic -13361 upstream,-2990 upstream {F13D11.3.1},{F13D11.2a} 4684 CB6648_redo X 5819247 1 X X -1000 -999.99 -1000 -1000 4 -1 3 @,.,, indel -1 SNP none {uCE6-959} 3498 CB6648_redo X 5857436 1 T G 255 1.00 63 62 0 25 25 @gggGGggGgGggGgGggGggGGgGg point 0 nongenic,nongenic -3221 upstream,-5280 upstream {W06B11.4},{F49E10.5} 3499 CB6648_redo X 5883992 1 C T 255 1.00 63 62 0 45 45 @tttTtTttTTtttTTttTTTtTttTttTtttttTtTtTtTtTtTt point 0 SNP none {haw103817} 3500 CB6648_redo X 6059575 1 C T 134 1.00 63 2 2 7 9 @..tTTtttT point 0 missense CCC->TCC[Pro->Ser] {C45B2.5.1,C45B2.5.2} 4687 CB6648_redo X 6075482 0 X X -1000 -999.99 -1000 -1000 5 -2 3 @,.,..GGG indel 0 five_prime_UTR none {C45B2.4b.1} 3501 CB6648_redo X 6107174 1 T A 255 1.00 63 62 0 56 56 @AaAaaAaAaAaAAAAAAAAAaAAaAaaaaaAaaAAaaaAAaAAAAaAaAAaAaAaa point 0 nongenic 289 into {C15H9.7} 3502 CB6648_redo X 6224848 1 C T 30 1.00 63 62 3 6 9 @,..TTTTtt point 0 nongenic -10976 upstream {C14F11.2} 3504 CB6648_redo X 6287233 1 C T 3 5.81 0 18 2 6 8 @T,t.tttt point 0 nongenic,nongenic,nongenic -1102 upstream,-5851 upstream,810 into {T07H6.4},{T07H6.2},{T07H6.5} 3505 CB6648_redo X 6287251 1 T A 21 5.88 0 2 0 9 9 @AAaaaaaaa point 0 nongenic,nongenic,nongenic -1120 upstream,-5833 upstream,828 into {T07H6.4},{T07H6.2},{T07H6.5} 3510 CB6648_redo X 6287365 1 T A 80 3.31 50 62 0 6 6 @aaaaaa point 0 nongenic,nongenic,nongenic -1234 upstream,-5719 upstream,942 into {T07H6.4},{T07H6.2},{T07H6.5} 160894 CB6648_redo X 6287459 347 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3732 to 4079 bp into {T07H6.5} 3515 CB6648_redo X 6412638 1 A T 255 1.00 63 62 0 32 32 @TTTttTTTtTtTttTTttttTttttttttTtT point 0 SNP none {haw104221} 3519 CB6648_redo X 6792031 1 G C 255 1.00 63 62 0 42 42 @cCcCCcCCCCCCcCCCccCCcccCCCCcCcccccCccCCcCc point 0 missense GAG->GAC[Glu->Asp] {H22K11.1} 3520 CB6648_redo X 6833268 1 G A 29 1.00 63 14 3 3 6 @a,A,.A point 0 nongenic,nongenic,nongenic -1409 upstream,1924 into,1953 into {F41B4.2b.1},{F41B4.2a},{F41B4.2b.2} 4694 CB6648_redo X 6833278 0 X X -1000 -999.99 -1000 -1000 5 -2 3 @.,a,a,, indel 5 nongenic,nongenic,nongenic -1419 upstream,-1914 downstream,-1943 downstream {F41B4.2b.1},{F41B4.2a},{F41B4.2b.2} 4696 CB6648_redo X 6917594 0 X X -1000 -999.99 -1000 -1000 3 2 5 @...GgGgG indel 0 nongenic,nongenic,nongenic -3096 downstream,-312 downstream,-3351 downstream {F14B8.1b.2},{F14B8.1b.1},{F14B8.1a} 4701 CB6648_redo X 7037469 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @,,..,ggggg indel 2 nongenic,nongenic -13109 upstream,-1430 upstream {B0403.2},{R173.3} 3559 CB6648_redo X 7070737 1 A C 10 1.62 63 2 4 15 19 @..c.cc.cccccccccccc point 0 nongenic,nongenic -2223 upstream,740 downstream {B0403.4},{B0403.6} 3560 CB6648_redo X 7077720 1 T C 185 5.62 63 62 85 170 255 @CCCCC,,C,CCCCCcccccCCCCCCCCCcccccc.cccccccccccc.ccccc.CCC,,CC,CCCCCCCCcc.cccc,.c..,CcC,,,.,CC...,.. point 0 nongenic,nongenic -2432 upstream,-7596 upstream {B0403.6},{Y1B5A.1} 3561 CB6648_redo X 7077771 1 T A 21 6.44 63 62 118 137 255 @CCCCCCCCCCCCACCCcc.cccCCCCCCCCACCCCCCCCCCCCCccaccccaccccCCCCC,CCCCACCCCCC.cccc.ccaCAACCCCACAccccccc point 0 nongenic,nongenic -2483 upstream,-7545 upstream {B0403.6},{Y1B5A.1} 3563 CB6648_redo X 7078149 1 A T 11 5.00 37 62 236 19 255 @,,........,,,,,,,,.........T,,,,,,,,,.....t..tt....ttt.,,,T,,,,,T.....t...........t...........,T,T, point 0 nongenic,nongenic -2861 upstream,-7167 upstream {B0403.6},{Y1B5A.1} 3565 CB6648_redo X 7078203 1 A G 55 8.62 0 62 112 143 255 @,,.gg.G,.ggggg...gggg,,gggg..g,,GGGGGgggggg.G,G.ggggggg.gg.gggggGG,,...gGGGggg.ggG.gggg.gggggggggG. point 0 nongenic,nongenic -2915 upstream,-7113 upstream {B0403.6},{Y1B5A.1} 3566 CB6648_redo X 7078298 1 G A 11 6.38 30 46 184 71 255 @ACA,AAA,AAAA,A,Aaaaaaaaaaa.A,,AA,AA,,,Aaa.aaacaaaaa.aa,,AA,A,A,AAaaaa...aaaaaa.AA,,Aaaaaaaa.a.,AA,, point 0 nongenic,nongenic -3010 upstream,-7018 upstream {B0403.6},{Y1B5A.1} 3568 CB6648_redo X 7078449 1 A T 26 6.25 63 62 209 46 255 @,,,,,..,T,,,tt......TT,T,,,.t..tt.T,T,T,,,,,,,..tt...tt..t.,,,,,,,,,,.ttt......tTt,,,TTt,,,,,,T,t.t point 0 nongenic,nongenic -3161 upstream,-6867 upstream {B0403.6},{Y1B5A.1} 3570 CB6648_redo X 7078503 1 A G 5 9.12 0 28 73 182 255 @G.tg,,,,gGgg,,,,GgggGggggggg,gGGg..gg,,g.g...gGGGgggg,GGGGggggg.g,GG,G,GGgggggGGGggggggGGGGGGGgg.gg point 0 nongenic,nongenic -3215 upstream,-6813 upstream {B0403.6},{Y1B5A.1} 3571 CB6648_redo X 7078663 1 A G 3 9.19 0 30 66 189 255 @..,...ggG,.ggg..Gg.gg.,g.ggggGGg,GGGggggGG,gggGGGGGGGGGGGGgggggGGGGGggggggggGGGGGG,GGGGGggggg.gGGGG point 0 nongenic,nongenic -3375 upstream,-6653 upstream {B0403.6},{Y1B5A.1} 3572 CB6648_redo X 7078698 1 T A 3 5.25 0 20 94 161 255 @g.,.a,,Aa,.A,,,,.a...a.a.a...,,,gg,,Gag,ggaaa,,g.aa,.gg.g.aa..a,,...a.a,,,gg.a..a.,,GG..g.gGgagaagA point 0 nongenic,nongenic -3410 upstream,-6618 upstream {B0403.6},{Y1B5A.1} 3575 CB6648_redo X 7078863 1 A G 10 9.12 19 44 84 171 255 @G.....,,.Ggggg...gg,Gg.gg,,gg,GGGGgg.gg,G,,,G,g.ggGGGggGGggggggGGGGGGgggGGGGGGgggggg.gggG,,GGGGGGGG point 0 nongenic,nongenic -3575 upstream,-6453 upstream {B0403.6},{Y1B5A.1} 3578 CB6648_redo X 7224737 1 A T 255 1.00 63 62 0 41 41 @tttTtTTTTTttTTtTtTtTTttTtTTtTtTTtTttTtTtt point 0 nongenic 2032 into {ZK867.1a,ZK867.1b,ZK867.1c,ZK867.1d} 3579 CB6648_redo X 7247377 1 C A 255 1.00 63 62 0 44 44 @AAAAAAAaAaaaAAaaaaaaaAAAaAaAAAaaaAAaAaAAAaAA point 0 SNP none {haw104705} 3581 CB6648_redo X 7310131 1 G C 20 3.25 63 16 3 7 10 @.,.cCCcCcC point 0 nongenic,nongenic -1991 upstream,-306 upstream {T08A9.6},{K03A1.6} 3585 CB6648_redo X 7361569 1 A G 178 1.81 63 62 0 12 12 @GGGgggGGgGgg point 0 nongenic -3945 upstream {C56G3.2} 3590 CB6648_redo X 7436795 1 C T 23 1.00 63 62 2 4 6 @TtTt.. point 0 missense GGA->GAA[Gly->Glu] {C01C10.2b} 3591 CB6648_redo X 7527774 1 C T 255 1.00 63 62 0 26 26 @tttttttttttttttttTtttttttt point 0 SNP none {haw104910} 4709 CB6648_redo X 7559950 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @...,..cCc indel 0 nongenic,nongenic -126 upstream,-950 upstream {F08C6.5},{PDB1.1b.1} 3592 CB6648_redo X 7559951 1 G C 34 1.00 63 38 3 3 6 @Ccc.,. point 0 nongenic,nongenic -124 upstream,-951 upstream {F08C6.5},{PDB1.1b.1} 3593 CB6648_redo X 7566551 1 T C 255 1.00 63 62 0 42 42 @ccCcCcCCcccCcCcccccccCCccCcccCCcCCcccCcCCc point 0 missense,SNP GTT->GCT[Val->Ala],none {F08C6.3},{haw104923} 3594 CB6648_redo X 7588883 1 T C 255 1.00 63 62 0 39 39 @cccCCccCCccCCCcCcccCCcCcccCccCCcCCcCcCc point 0 missense TCA->CCA[Ser->Pro] {F08C6.1a.1,F08C6.1a.2,F08C6.1c} 3597 CB6648_redo X 7644184 1 C G 73 1.00 63 62 1 5 6 @GGGGG, point 0 nongenic,nongenic -6889 upstream,-7153 upstream {F27D9.3},{F26A10.2} 3598 CB6648_redo X 7649426 1 A G 117 1.00 63 62 1 8 9 @Gggggggg, point 0 nongenic,nongenic -12395 upstream,-1647 upstream {F26A10.2},{F27D9.3} 3599 CB6648_redo X 7671835 1 G C 116 1.00 63 26 2 6 8 @CccCCc,, point 0 nongenic,nongenic -1099 upstream,-2462 upstream {F27D9.2},{F27D9.7} 3600 CB6648_redo X 7671837 1 T G 26 1.00 63 62 3 5 8 @ggGGg,,, point 0 nongenic,nongenic -1097 upstream,-2464 upstream {F27D9.2},{F27D9.7} 3601 CB6648_redo X 7719008 1 G C 24 1.00 63 62 8 8 16 @cCCCCccC....,,.. point 0 nongenic,nongenic -205 upstream,-8349 upstream {K09F5.6},{K09F5.4} 3602 CB6648_redo X 7729211 1 C T 255 1.00 63 62 0 40 40 @tTTTtTtTtttTTtTTTTttTtTtTTTTTtttTtTTttTt point 0 silent CTC->CTT[Leu->Leu] {K09F5.2} 3603 CB6648_redo X 7764853 1 T A 184 5.19 63 62 0 14 14 @AAAAAaaaAaaaaa point 0 nongenic,nongenic,nongenic -6756 upstream,1693 into,1703 into {C47C12.4},{C47C12.6.1,C47C12.6.2},{C47C12.6.3} 3604 CB6648_redo X 7764866 1 C T 16 9.00 5 2 0 6 6 @tttttt point 0 nongenic,nongenic,nongenic -6769 upstream,1706 into,1716 into {C47C12.4},{C47C12.6.1,C47C12.6.2},{C47C12.6.3} 3611 CB6648_redo X 7771370 1 G A 220 1.12 63 62 0 14 14 @aaaaaaaaaaaaaa point 0 nongenic,nongenic,nongenic,nongenic -13273 upstream,3389 into,3390 into,3488 into {C47C12.4},{C47C12.6.2},{C47C12.6.3},{C47C12.6.1} 3612 CB6648_redo X 7771404 1 G A 186 1.31 63 62 0 9 9 @aaaaaaaaa point 0 nongenic,nongenic,nongenic,nongenic -13307 upstream,3355 into,3356 into,3454 into {C47C12.4},{C47C12.6.2},{C47C12.6.3},{C47C12.6.1} 3613 CB6648_redo X 7771436 1 A T 50 1.44 63 46 0 9 9 @TTTTTTTTT point 0 nongenic,nongenic,nongenic,nongenic -13339 upstream,3323 into,3324 into,3422 into {C47C12.4},{C47C12.6.2},{C47C12.6.3},{C47C12.6.1} 3614 CB6648_redo X 7823444 1 G T 94 1.00 63 0 0 5 5 @tttTT point 0 nongenic,nongenic -149 upstream,-151 upstream {R03G5.1a.1,R03G5.1a.2,R03G5.1b.1,R03G5.1c.1,R03G5.1c.2,R03G5.1c.3},{R03G5.1a.3,R03G5.1b.2,R03G5.1c.4,R03G5.1d} 3616 CB6648_redo X 7823468 1 A T 156 1.00 63 0 0 5 5 @TTTtt point 0 nongenic,nongenic -125 upstream,-127 upstream {R03G5.1a.1,R03G5.1a.2,R03G5.1b.1,R03G5.1c.1,R03G5.1c.2,R03G5.1c.3},{R03G5.1a.3,R03G5.1b.2,R03G5.1c.4,R03G5.1d} 3617 CB6648_redo X 7841129 1 G T 162 1.00 63 62 1 7 8 @tTTtTTT, point 0 nongenic -1445 upstream {C54D2.1} 3618 CB6648_redo X 7872981 1 C A 255 1.00 63 62 0 43 43 @AaaaAAaAAAaAaAaAAaaAAaAaaaAaaAaAAaAaAaaAaAa point 0 SNP none {haw105178} 4717 CB6648_redo X 7984029 4 X X -1000 -999.99 -1000 -1000 7 -6 1 @...,,,,aAa indel -4 nongenic,nongenic -1894 upstream,-2008 upstream {F45E1.4},{F45E1.6.1} 3619 CB6648_redo X 8026787 1 G T 38 1.00 63 62 2 3 5 @,,TtT point 0 three_prime_UTR none {C34D10.2.1,C34D10.2.2} 3620 CB6648_redo X 8029563 1 C T 255 1.00 63 62 0 32 32 @TttttttTTtTtTTtttTTtTTtTtttTtttt point 0 SNP none {haw105378} 3621 CB6648_redo X 8033820 1 G C 255 1.00 63 62 0 11 11 @cCccCCCCCcc point 0 missense GCC->GGC[Ala->Gly] {C18A11.6} 3622 CB6648_redo X 8076590 1 A T 194 1.00 63 62 0 9 9 @CCTTTtttt point 0 nongenic -1097 upstream {C46F2.1} 3624 CB6648_redo X 8207445 1 A C 16 1.00 63 14 2 3 5 @,,CcC point 0 nongenic -3718 upstream {C17H11.6c.1} 3625 CB6648_redo X 8207446 1 C T 14 1.00 63 16 2 3 5 @,,TtT point 0 nongenic -3719 upstream {C17H11.6c.1} 3626 CB6648_redo X 8274483 1 G C 10 1.00 63 62 2 5 7 @cccCC,, point 0 nongenic,nongenic,nongenic -3520 upstream,-614 upstream,-625 upstream {F13B9.6},{F13B9.5.1},{F13B9.5.2} 3627 CB6648_redo X 8325358 1 G T 33 1.00 63 62 3 5 8 @,.,TTtTt point 0 missense CAA->AAA[Gln->Lys] {R09F10.8.1,R09F10.8.2} 4727 CB6648_redo X 8374022 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @...,.AAA indel 0 nongenic,nongenic -1999 upstream,-393 downstream {F40B5.1},{F40B5.3} 3634 CB6648_redo X 8502322 1 G T 148 1.00 63 0 0 5 5 @TttTt point 0 nongenic,nongenic -5491 upstream,232 downstream {H03E18.1.1},{T01B10.1} 3640 CB6648_redo X 8602894 1 T A 33 1.19 63 62 8 9 17 @a..a..a.aaa.aAa,. point 0 nongenic,nongenic 569 downstream,768 downstream {H35N09.2},{F18E9.1} 3641 CB6648_redo X 8602905 1 T G 176 1.25 63 44 0 9 9 @gggggGgGg point 0 nongenic,nongenic 558 downstream,779 downstream {H35N09.2},{F18E9.1} 3643 CB6648_redo X 8603049 1 A G 255 1.00 63 62 0 13 13 @gGGGGGGGGGggg point 0 nongenic,nongenic 414 downstream,923 downstream {H35N09.2},{F18E9.1} 3644 CB6648_redo X 8629824 1 A C 255 1.00 63 62 0 47 47 @ccCcCcccCCCCccccCcCCCcccccccCCCcCCCCCCccccCcCcC point 0 SNP none {haw105786} 3651 CB6648_redo X 8769996 1 A G 75 1.00 63 62 2 7 9 @GGGGgg.g, point 0 nongenic -8791 upstream {ZK721.4.1} 3652 CB6648_redo X 8801882 1 A G 23 1.00 63 62 4 12 16 @.GG,,GGgg.gggggg point 0 three_prime_UTR none {R04E5.8a} 3653 CB6648_redo X 8941347 1 C T 51 1.00 63 62 3 5 8 @,,.Ttttt point 0 missense CGA->CAA[Arg->Gln] {D1073.1a,D1073.1b} 3654 CB6648_redo X 9171369 1 G T 255 1.00 63 62 0 42 42 @TTtttTttTttTTttttttTtTttTTTtttTtttTTTttTtt point 0 SNP none {haw106181} 3656 CB6648_redo X 9188219 1 C T 255 4.12 63 62 78 177 255 @,,tt...,,.,....,,..,....,,T,T,,..T,..,t..,....,..,,.t.,..,,t.TTTTTtTTTTttTTTtTTtTTTTTtTTtt,TTTTTttt point 0 SNP none {haw106187} 160896 CB6648_redo X 9189206 252 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 5107 to 5359 bp into {Y81B9A.2} 3660 CB6648_redo X 9198534 1 A G 24 1.00 63 20 2 6 8 @,.Gggggg point 0 nongenic -12636 upstream {C35B8.4} 3661 CB6648_redo X 9212879 1 T G 20 1.00 63 62 3 5 8 @,.,Ggggg point 0 nongenic,nongenic -1007 upstream,798 downstream {C35B8.3a.1},{C35B8.4} 4741 CB6648_redo X 9301361 0 X X -1000 -999.99 -1000 -1000 2 0 2 @..TT indel 0 nongenic -2296 upstream {B0416.1} 3662 CB6648_redo X 9328749 1 C T 27 1.00 63 62 5 8 13 @..,..ttttTtTT point 0 nongenic,nongenic -2328 upstream,-9635 upstream {T20B5.2},{F35G8.1} 3663 CB6648_redo X 9460186 1 A C 206 2.00 63 62 16 38 54 @cCc,CCcc,c,,,cc,c,cc,,cccccCCc,ccC,c,ccc,,,CCcccCcC,Cc point 0 missense GAT->GAG[Asp->Glu] {ZK899.5} 3664 CB6648_redo X 9462102 1 T C 255 1.50 63 62 0 37 37 @CccccCcCcCCCCcCCCCCCCCCcCCcCCcCcCCcCc point 0 nongenic,nongenic -1186 upstream,-1234 upstream {ZK899.6},{ZK899.5} 3666 CB6648_redo X 9536669 1 T A 255 1.00 63 62 0 26 26 @aAAAAaaAaaaaaAAaaAaaaaaaAa point 0 SNP none {haw106328} 3667 CB6648_redo X 9703760 1 T A 255 1.12 63 62 0 48 48 @AAAAaaAaaAaaAAaAAaAaaaaAAaaAAAAAAAAAaaAAaaAAaAaA point 0 nongenic -3113 upstream {F15G9.1a} 3668 CB6648_redo X 9703853 1 T C 255 1.19 63 62 0 26 26 @CCCCcCCCCCCCCCCCCCCCCCCcCc point 0 nongenic -3020 upstream {F15G9.1a} 3669 CB6648_redo X 9774476 1 A G 255 1.00 63 62 0 31 31 @gggggggGgGGgggggggggggGgggggGGG point 0 SNP none {haw106424} 3670 CB6648_redo X 9861507 1 G T 255 1.00 63 62 0 71 71 @TTTtTTtTtttTtTtTTttTtTTtTTTTTTTTTTtTTtTttTTTTtttttTTtTtttTTtTTttttTTTTt point 0 missense,SNP AGT->ATT[Ser->Ile],none {R07B1.3},{haw106438} 3671 CB6648_redo X 9882632 1 A C 255 1.00 63 62 0 33 33 @CcCcCCCCCCcCCccCcCcCCCcccCCCcCccc point 0 nongenic,nongenic -1579 upstream,-491 upstream {F21G4.2},{R07B1.12} 3674 CB6648_redo X 9999591 1 A G 255 1.00 63 62 0 17 17 @gGgGgggggggggGgGG point 0 nongenic,nongenic -1281 upstream,-478 upstream {F19C6.2a,F19C6.2b},{F19C6.1} 4745 CB6648_redo X 10071939 0 X X -1000 -999.99 -1000 -1000 1 1 2 @,Ccc indel 0 nongenic,nongenic -2221 upstream,685 downstream {ZC373.4},{ZC373.5} 3675 CB6648_redo X 10130976 1 T G 255 1.00 63 62 0 36 36 @GggGGggGGggGgggggGGgGGGGGggggGgGgGgg point 0 SNP none {haw106550} 3676 CB6648_redo X 10179283 1 T C 67 1.00 63 62 1 4 5 @.cccc point 0 five_prime_UTR none {F21A10.1b} 3677 CB6648_redo X 10179285 1 C G 101 1.00 63 62 1 5 6 @.ggggg point 0 five_prime_UTR none {F21A10.1b} 3678 CB6648_redo X 10233035 1 C A 255 1.00 63 62 0 45 45 @aaAaaaAAAAaAAaAAaaaaAAAaaaAaAAAaAaaAaAaaAaaAA point 0 nongenic,nongenic -4966 upstream,700 downstream {C14H10.3a},{C14H10.1} 3679 CB6648_redo X 10290548 1 G T 58 1.00 63 42 2 5 7 @TTttt., point 0 nongenic,nongenic -12030 upstream,-4880 upstream {F41E7.4},{F41E7.3} 3680 CB6648_redo X 10290549 1 A G 42 1.00 63 58 2 3 5 @ggg., point 0 nongenic,nongenic -12029 upstream,-4881 upstream {F41E7.4},{F41E7.3} 3692 CB6648_redo X 10421428 1 G A 255 1.00 63 62 0 31 31 @AAaAaaAaaaaAAAAAAAaaaaaAAaaaAAa point 0 SNP none {haw106854} 3693 CB6648_redo X 10439131 1 C T 255 1.00 63 62 0 40 40 @TtttTTtttTtTtttttTtTTtTtTtttTttTTtTTTTTT point 0 SNP none {haw106868} 3694 CB6648_redo X 10473878 1 G A 255 1.00 63 62 0 28 28 @AAaAaaaaAaaAAAAAAaAAAAaAaAaa point 0 SNP none {haw106890} 3695 CB6648_redo X 10591190 1 G T 255 1.00 63 62 0 54 54 @tTtTttTttTTTTTtTtTTtttTtTttTTtttTtcTtTTTTTTTTTtTTTttTT point 0 SNP none {haw106989} 3696 CB6648_redo X 10594749 1 A C 71 1.00 63 62 1 4 5 @CCCc, point 0 nongenic,nongenic -1484 upstream,-9990 upstream {F57C7.3a},{M79.4} 3698 CB6648_redo X 10845087 1 T C 222 1.00 63 62 0 16 16 @CCCCCCCCCCCCCCCC point 0 nongenic -485 upstream {C05A9.2} 3699 CB6648_redo X 10896349 1 A G 255 1.00 63 62 0 39 39 @GggggGggGGGGGGGggGggGggGggGggggGGggGGGg point 0 nongenic -2 upstream {F47B10.2} 3701 CB6648_redo X 11158111 1 T A 255 1.00 63 62 0 47 47 @aaaaaaaAAAAAaaaaAaaaAAaaaaaAAaaaAaaaaAAAaaaaAaA point 0 SNP none {pas45631} 3702 CB6648_redo X 11310929 1 A T 46 1.00 63 62 14 33 47 @,,tt,,,ttttt,ttttttt,ttt,tt,tt,,,tttttt,tttt,tt point 0 nongenic -778 upstream {F08G12.5} 3703 CB6648_redo X 11310952 1 C T 32 1.00 63 62 15 26 41 @,tt,,,tttttt,tttt,tttt,,,t,tt,tt,tt,,tt,t point 0 nongenic -801 upstream {F08G12.5} 3704 CB6648_redo X 11423706 1 T C 105 1.00 63 52 4 7 11 @CCcCCcc.... point 0 missense AGA->GGA[Arg->Gly] {F46C3.3a,F46C3.3b} 4758 CB6648_redo X 11492873 2 X X -1000 -999.99 -1000 -1000 10 -3 7 @...,..,... indel -2 SNP none {uCE6-1222} 3713 CB6648_redo X 11600446 1 C A 255 1.00 63 62 0 37 37 @aaaaaAAAaaAAaaAAaAaAaAAAaAaAaaAAaAaaa point 0 SNP none {haw107592} 3714 CB6648_redo X 11624629 1 T C 255 1.00 63 62 0 32 32 @CCCccccCcCCcCccCCCcccCCcccCCCccC point 0 missense,SNP GAT->GGT[Asp->Gly],none {Y71H9A.1},{haw107616} 4759 CB6648_redo X 11654822 4 X X -1000 -999.99 -1000 -1000 4 -2 2 @....Aa indel -4 nongenic,nongenic,nongenic,nongenic -3539 upstream,-3979 upstream,1332 into,964 into {T04F8.3},{T04F8.4},{T04F8.2.1},{T04F8.2.2} 4760 CB6648_redo X 11689187 1 X X -1000 -999.99 -1000 -1000 10 -7 3 @,.,,...... indel -1 SNP none {uCE6-1229} 3724 CB6648_redo X 11789301 1 C G 255 9.00 63 62 7 181 188 @g,Gg,G,,,,,GGGGGGGGGggggggGGGGGGGGGGGGggggGGGGGGGGgggggggggGGGGGGGgggggGGGGGGGGGGGGgggGGGGGGggggGGG point 0 nongenic,nongenic -5046 upstream,-9124 upstream {Y102F5A.1},{C34E11.1.1} 3726 CB6648_redo X 11791596 1 G C 71 1.00 63 0 2 5 7 @,,ccCCc point 0 nongenic,nongenic -6829 upstream,-7341 upstream {C34E11.1.1},{Y102F5A.1} 3728 CB6648_redo X 11831508 1 C A 255 3.19 63 62 0 56 56 @AaAAAaAAaAaaaAaaAAaaAAAaaAAaaAAAAaAaAaAaaAAaaaaAaaaAAAaa point 0 nongenic 4532 into {C34E11.3} 3729 CB6648_redo X 11831549 1 T C 255 2.56 63 62 0 42 42 @ccCCCccCccCcCCcccccccCCcccccCcccccccCccccc point 0 nongenic 4491 into {C34E11.3} 3732 CB6648_redo X 11886519 1 A C 43 1.00 53 30 1 4 5 @,TCCC point 0 nongenic -157 upstream {Y62H9A.7} 3738 CB6648_redo X 12023120 1 C A 255 3.12 63 62 0 28 28 @AAAaaAAAaaaaaaaAAAaaaAAAaAAA point 0 nongenic -6629 upstream {B0198.2} 3747 CB6648_redo X 12276999 1 A T 244 8.44 63 62 0 32 32 @ttttttttttttTttttttttttttttttttt point 0 nongenic,nongenic -1398 upstream,-3630 upstream {C04B4.6},{C04B4.1.1} 3748 CB6648_redo X 12277026 1 C A 255 1.06 63 62 0 21 21 @aAaaaaaaaaaaaaaaaaaaa point 0 nongenic,nongenic -1425 upstream,-3603 upstream {C04B4.6},{C04B4.1.1} 3749 CB6648_redo X 12277112 1 A G 255 1.06 63 62 0 26 26 @GGGGggGGGGgGgGGggggggGgggg point 0 nongenic,nongenic -1511 upstream,-3517 upstream {C04B4.6},{C04B4.1.1} 3750 CB6648_redo X 12277116 1 A T 255 1.06 63 62 0 36 36 @TTTTttTTTTtTtTTttttttTttttTttTttTTtt point 0 nongenic,nongenic -1515 upstream,-3513 upstream {C04B4.6},{C04B4.1.1} 3751 CB6648_redo X 12277171 1 A T 255 2.88 63 62 0 67 67 @TttTTtTttTTTTTttTTTTTttTTttTTtTTTTTtTtTTtTTTttTTTtTttTttttTTTttTTTT point 0 nongenic,nongenic -1570 upstream,-3458 upstream {C04B4.6},{C04B4.1.1} 3754 CB6648_redo X 12277312 1 A G 5 2.62 0 16 19 27 46 @gggG,gGgggGGG,g,,.,,..,,.,,,ggG,GGGGgG,GGGG,G, point 0 nongenic,nongenic -1711 upstream,-3317 upstream {C04B4.6},{C04B4.1.1} 3755 CB6648_redo X 12277519 1 A G 32 4.38 63 62 227 28 255 @,,,,GG...,.GG,Gggg..,,,,,,Gggg.gGGGG,g...G,G,,,,,G.g.,,G,G,G,,,GGGG,,ggG,,GG,G,G.g.,G,,,G,G,,GGG,G, point 0 nongenic,nongenic -1918 upstream,-3110 upstream {C04B4.6},{C04B4.1.1} 3756 CB6648_redo X 12277622 1 T G 255 1.12 63 62 0 107 107 @GGGgggGGgGGGGGGGGgggGGGGGgggggGGGGGggggGGGGGGggGGGGGGGggggGggggggGGGggggggGGGGGgggggggGGGGGggggGGgg point 0 nongenic,nongenic -2021 upstream,-3007 upstream {C04B4.6},{C04B4.1.1} 3759 CB6648_redo X 12277788 1 C T 3 2.69 7 14 29 38 67 @TT,TT.TTTTtTTTT,,.TT,..t,T,.TTTt,Ttt.t,t.t.TTTt.ttt.T,,TtT,,,,,,,,. point 0 nongenic,nongenic -2187 upstream,-2841 upstream {C04B4.6},{C04B4.1.1} 3760 CB6648_redo X 12277811 1 A G 11 2.75 37 14 15 52 67 @ggg.GGGggggggGGGGgG,,,,,,,,.,,,,gGgGGGGGGGGGGGGGGGGGGGGGGGGgGGG,GGg point 0 nongenic,nongenic -2210 upstream,-2818 upstream {C04B4.6},{C04B4.1.1} 3762 CB6648_redo X 12278193 1 T G 4 9.06 0 52 12 23 35 @Ggggggggg..GGG.G....GGGGGGG,.G,G..G point 0 nongenic,nongenic -2436 upstream,-2592 upstream {C04B4.1.1},{C04B4.6} 4767 CB6648_redo X 12440274 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @,,..CC indel 0 nongenic -410 upstream {T18D3.7.1,T18D3.7.2} 3778 CB6648_redo X 12560995 1 T C 245 1.00 63 62 0 13 13 @CCcccCCCCCCCC point 0 nongenic,nongenic -12995 upstream,-9395 upstream {T24D5.1},{C16D6.2} 3779 CB6648_redo X 12569395 1 A T 227 1.00 63 62 8 25 33 @tTttTt,TTtTtt,TT.tTT.TtTTT.t..t.t point 0 nongenic,nongenic -17795 upstream,-4595 upstream {C16D6.2},{T24D5.1} 3780 CB6648_redo X 12600324 1 C A 39 1.00 63 62 2 4 6 @..AaAa point 0 nongenic,nongenic -1104 upstream,-2626 upstream {T24D5.5},{T24D5.6} 3781 CB6648_redo X 12642762 1 A G 69 1.00 63 62 3 5 8 @.,.gGGGg point 0 SNP none {haw107971} 4769 CB6648_redo X 12642764 2 X X -1000 -999.99 -1000 -1000 7 -5 2 @,..,,,. indel -2 SNP none {uCE6-1295} 3783 CB6648_redo X 12701755 1 G A 32 1.00 63 10 4 6 10 @aAAAAa,.., point 0 silent TTC->TTT[Phe->Phe] {T07C5.3a,T07C5.3b} 3784 CB6648_redo X 12786146 1 G C 255 1.00 63 62 0 37 37 @CCCCcccccCCcccCccccCccCCCcCCCCcCCcCCc point 0 missense,SNP TGG->TGC[Trp->Cys],none {T22H6.2a,T22H6.2b},{haw107989} 3785 CB6648_redo X 12795967 1 C A 255 1.00 63 62 0 54 54 @AAaaAAAaaAAaaaAAaAaAAaAAaAaaaAAAAaAAAaAAAaAAaAAAaAAaAA point 0 SNP,three_prime_UTR none,none {haw107990},{T22H6.6a,T22H6.6b} 3787 CB6648_redo X 13034301 1 T A 255 1.00 63 62 0 42 42 @AaaAaaAAaAAAaaAaAaAAAAaAaaAAAaAAAaaaaAAaAA point 0 SNP none {haw108272} 3788 CB6648_redo X 13041027 1 A C 3 1.00 63 62 2 4 6 @CCCC.. point 0 SNP none {haw108284} 4774 CB6648_redo X 13119683 0 X X -1000 -999.99 -1000 -1000 1 1 2 @.Aa indel 0 nongenic,nongenic -2530 downstream,-545 upstream {F17H10.3a,F17H10.3b.1},{F17H10.3b.2} 3789 CB6648_redo X 13235302 1 T A 46 1.00 63 62 2 5 7 @Aa,aaa, point 0 nongenic,nongenic -2041 upstream,-422 upstream {K08H2.3},{K08H2.2} 3791 CB6648_redo X 13384402 1 T A 255 1.00 63 62 0 32 32 @aaaaaaaAAAaaaaAaaaaAAaaAAAAAaAAa point 0 SNP none {haw108496} 3793 CB6648_redo X 13396051 1 T G 42 1.00 63 26 2 4 6 @,.GGgg point 0 nongenic,nongenic -897 upstream,-978 upstream {F02C12.3},{F02C12.4} 3794 CB6648_redo X 13437208 1 C T 233 2.94 63 62 0 15 15 @tttttttttttttTt point 0 nongenic,nongenic -5688 upstream,832 into {C29F7.5},{C29F7.6} 3795 CB6648_redo X 13480349 1 T A 255 1.00 63 62 0 53 53 @AAaaAaAAAAaaAAaaaaAAAAAAAAaAAAaAaAAaAaaAaAaaaAAAaaaAA point 0 missense,SNP AAC->ATC[Asn->Ile],none {F15A2.4},{haw108526,uCE6-1345} 4781 CB6648_redo X 13527874 0 X X -1000 -999.99 -1000 -1000 4 0 4 @.,,.Aaaaa indel 0 nongenic,nongenic,nongenic -1133 upstream,-537 upstream,-586 upstream {F18H3.4.1},{F18H3.3a.1},{F18H3.3a.3} 3802 CB6648_redo X 13649405 1 A C 15 6.19 63 6 2 3 5 @..CCc point 0 nongenic -1763 upstream {C40C9.4} 3806 CB6648_redo X 13652271 1 C T 64 1.00 63 0 0 4 4 @tTtt point 0 nongenic,nongenic -8168 upstream,612 downstream {C04A11.1},{C40C9.4} 4782 CB6648_redo X 13656725 3 X X -1000 -999.99 -1000 -1000 11 -7 4 @,,..,...,,. indel -3 SNP none {uCE6-1357} 4783 CB6648_redo X 13708213 0 X X -1000 -999.99 -1000 -1000 5 -1 4 @,...,ggGG indel 0 nongenic,nongenic 430 downstream,654 downstream {K02D3.2},{K02D3.1} 4784 CB6648_redo X 13713053 0 X X -1000 -999.99 -1000 -1000 3 1 4 @,..AA indel 0 nongenic,nongenic -1026 upstream,-1166 upstream {K11E4.1},{K02D3.2} 3807 CB6648_redo X 13737752 1 G T 255 1.00 63 62 0 36 36 @ttTTTtTttTTTTTTTTtTTtTtTtTtttTTttTtt point 0 SNP none {haw108674,uCE6-1361} 3808 CB6648_redo X 13738978 1 T C 14 1.00 63 38 1 3 4 @.CCC point 0 nongenic -8259 upstream {K11E4.5a} 3809 CB6648_redo X 13738979 1 G T 71 1.00 63 14 0 5 5 @TTTtt point 0 nongenic -8258 upstream {K11E4.5a} 3811 CB6648_redo X 13917112 1 G C 255 1.00 63 62 0 31 31 @ccCcCcCCCCCCCcccCcccCcCcCccCcCc point 0 nongenic -15 upstream {Y26E6A.1} 3812 CB6648_redo X 13936891 1 A C 48 1.00 63 4 1 4 5 @.Cccc point 0 nongenic,nongenic -1773 upstream,2086 into {K02B9.4a},{K02B9.4b} 3813 CB6648_redo X 14118935 1 A G 255 1.12 63 62 0 15 15 @ggggGGGGGGGGGGG point 0 nongenic,nongenic -8867 upstream,1926 into {F28H6.4},{F28H6.6} 3816 CB6648_redo X 14229404 1 A T 255 4.62 63 62 0 24 24 @tTTTtttTtTTtTtttttTTttTt point 0 nongenic,nongenic 185 downstream,921 downstream {K04C1.6},{K06G5.2} 3817 CB6648_redo X 14375235 1 T C 227 1.00 63 62 0 9 9 @CccCCCCcc point 0 SNP none {uCE6-1407} 3818 CB6648_redo X 14379009 1 T C 27 6.38 0 26 0 18 18 @CCCccccccccCcCCcCc point 0 nongenic,nongenic -1757 upstream,-4162 upstream {Y60A9A.1},{Y60A9.3} 3819 CB6648_redo X 14381923 1 G A 255 1.00 63 62 0 70 70 @aAaaAAAaaaAAaaaaAaaaaaAAaaaaaaAAAAAaaaAaAAaAAaaAAaAAaaaaAAaAAaAAaaAAAa point 0 SNP none {haw109439} 3823 CB6648_redo X 14510694 1 G A 239 3.62 63 62 0 20 20 @aaaaaAaaaaaaaaaaaaaa point 0 nongenic,nongenic -6932 upstream,532 downstream {M163.1},{D1025.3} 3824 CB6648_redo X 14510701 1 T G 238 3.50 63 62 0 21 21 @ggggGgggggggggggggggg point 0 nongenic,nongenic -6939 upstream,525 downstream {M163.1},{D1025.3} 3825 CB6648_redo X 14573707 1 A G 16 1.00 63 40 2 3 5 @..gGG point 0 nongenic,nongenic,nongenic -4168 upstream,1068 into,4912 into {C44H4.2},{C44H4.1},{H01A20.2} 3826 CB6648_redo X 14577774 1 T A 255 1.00 63 62 0 23 23 @AaaaAaaaAaaAaAaaaaAaaaa point 0 nongenic,nongenic -101 upstream,6732 into {C44H4.2},{H01A20.2} 3827 CB6648_redo X 14613805 1 C A 255 1.00 63 62 0 41 41 @AaaaaAAAAaAaAaaaAAAaAaaaaaaaaAaaaaaaAaAAa point 0 ncRNA,silent none,CGA->AGA[Arg->Arg] {F54E4.1b},{F54E4.1a} 3828 CB6648_redo X 14621700 1 T C 50 1.00 63 20 3 5 8 @CCCcC... point 0 ncRNA none {F54E4.1b} 3829 CB6648_redo X 14621702 1 C T 20 1.00 63 50 3 5 8 @TTTtT... point 0 ncRNA none {F54E4.1b} 3830 CB6648_redo X 14637664 1 A C 255 1.00 63 62 0 31 31 @CCCCcCCccCCCCCCCCCCCccCCccccCCc point 0 nongenic -1335 upstream {F54E4.3} 3834 CB6648_redo X 14766656 1 G C 109 1.00 63 36 0 4 4 @cccC point 0 silent CCC->CCG[Pro->Pro] {Y16B4A.2} 3835 CB6648_redo X 14767044 1 C G 255 1.00 63 62 0 45 45 @GGGgGGGGGGgGGggGGGGGGGgGgGGggGgGgGGGgGGgGGggG point 0 missense GAA->CAA[Glu->Gln] {Y16B4A.2} 3836 CB6648_redo X 14776055 1 A T 160 1.00 63 62 0 6 6 @TTTTTT point 0 nongenic,nongenic,nongenic -14871 upstream,-4282 upstream,2597 into {F42D1.2.1},{Y16B4A.2},{Y16B4A.1} 3842 CB6648_redo X 14913406 1 G T 255 1.00 63 62 0 49 49 @TTttTttTTTTtTtTtTTTtTttttTtTtTTtTTttttTtTTttTttTt point 0 SNP none {haw110147} 3843 CB6648_redo X 14921904 1 G A 255 1.00 63 62 0 11 11 @aaaAaaAaaAa point 0 SNP none {haw110159} 3844 CB6648_redo X 14921912 1 A G 255 1.00 63 62 0 10 10 @ggGggGggGg point 0 SNP none {haw110160} 3847 CB6648_redo X 14945493 1 T C 255 1.00 63 62 0 30 30 @CCCccCcccCcccccCcCcccccccCCccc point 0 SNP none {haw110192} 3848 CB6648_redo X 14962448 1 A T 255 1.00 63 62 0 41 41 @TTTTTTTTTtTTTTTtTTTtTTTTTTTTTTtTtTTTTTTtT point 0 nongenic,nongenic -393 upstream,-995 upstream {F45B8.2},{F45B8.3} 3851 CB6648_redo X 15112157 1 C T 16 1.00 63 60 2 2 4 @..TT point 0 nongenic,nongenic -4269 upstream,2287 into {F09B12.1b.1},{R07D5.2} 3852 CB6648_redo X 15207906 1 C T 87 1.00 63 46 0 5 5 @TttTT point 0 nongenic -8848 upstream {T10B10.5} 3853 CB6648_redo X 15207908 1 A C 55 1.00 63 4 0 4 4 @ccCC point 0 nongenic -8850 upstream {T10B10.5} 3856 CB6648_redo X 15207922 1 G T 122 1.00 63 38 0 7 7 @tttTttt point 0 nongenic -8864 upstream {T10B10.5} 3857 CB6648_redo X 15226797 1 G T 255 1.00 63 62 0 50 50 @TtTTTtTTtttttttTttTtTTTTtttTTTtTtTTTTTtTTTTTTTTTTT point 0 missense,SNP CCT->CAT[Pro->His],none {H03A11.2},{haw110591} 3861 CB6648_redo X 15447753 1 C T 255 1.31 63 62 0 24 24 @TttTtTTTTTtTttTttTTTtTTT point 0 nongenic,nongenic -14011 upstream,1103 into {R03A10.6.1},{R03A10.5} 3863 CB6648_redo X 15472090 1 A T 255 8.31 63 62 0 28 28 @TTttttTttTTttTtTttTgtttTtTtT point 0 nongenic,nongenic -6848 upstream,1374 into {C46E1.2},{C46E1.3} 3864 CB6648_redo X 15520197 1 A G 101 1.00 63 62 1 4 5 @,gGGG point 0 ncRNA none {H30A04.1c} 3865 CB6648_redo X 15722216 1 A G 255 1.00 63 62 0 48 48 @GGgGGGgggggGggGGGGGgGGggGGGgGGGGGggGggGGGGgGGgGG point 0 nongenic,nongenic -3834 upstream,1025 into {ZK662.4.1,ZK662.4.2},{ZK662.5} 3882 CB6648_redo X 15816874 1 A T 100 1.00 63 62 0 4 4 @TTTt point 0 nongenic -4468 upstream {Y7A5A.8} 3883 CB6648_redo X 15836084 1 A G 255 2.88 63 62 0 61 61 @GGGGGGGgGGGgGggGGgGGGgGgGGgGGGGgGGGgGgGGgGGgGgGGGgggGGGGGgGGG point 0 nongenic,nongenic -5408 upstream,2112 into {F59F4.2},{F59F4.1} 3884 CB6648_redo X 15836927 1 T C 255 1.00 63 62 0 31 31 @cccCccccccCccccccCccccccccccccc point 0 missense ACA->GCA[Thr->Ala] {F59F4.1} 3885 CB6648_redo X 15904379 1 C A 255 1.00 63 62 0 44 44 @AAaaaaAAAAAaAAAaaAaaaaAaAAaaaaaAAaaaAaaaAaAA point 0 nongenic,nongenic -16871 upstream,-6178 upstream {F53H4.3},{F31B9.1} 3886 CB6648_redo X 15904380 1 A C 255 1.00 63 62 0 44 44 @CccccCCCCCcCCCccCccccCcCCcccccCCcccCcccCcCCC point 0 SNP none {haw111415} 3887 CB6648_redo X 15904862 1 T A 142 1.00 63 62 0 4 4 @aaAa point 0 nongenic,nongenic -17354 upstream,-5695 upstream {F53H4.3},{F31B9.1} 3888 CB6648_redo X 15945619 1 A T 255 1.00 63 62 0 43 43 @TTtTTTtTtttTtTtTttTTTtTTTTTTTTttTTttTTttTTT point 0 SNP none {haw111469} 3889 CB6648_redo X 15945743 1 G T 162 1.00 63 62 0 5 5 @tTtTt point 0 nongenic,nongenic,nongenic -6498 upstream,-6550 upstream,1815 into {E03G2.2},{E03G2.4},{E03G2.3} 3890 CB6648_redo X 15945744 1 G T 160 1.00 63 62 0 5 5 @tTtTt point 0 nongenic,nongenic,nongenic -6499 upstream,-6549 upstream,1816 into {E03G2.2},{E03G2.4},{E03G2.3} 3891 CB6648_redo X 15945755 1 A T 255 1.00 63 62 0 10 10 @TttTTtTttt point 0 nongenic,nongenic,nongenic -6510 upstream,-6538 upstream,1827 into {E03G2.2},{E03G2.4},{E03G2.3} 3893 CB6648_redo X 16010916 1 G T 255 1.00 63 62 0 35 35 @TTtTtttttTttttttTTTTTTTtttttTttttTt point 0 SNP none {haw111536} 3894 CB6648_redo X 16010919 1 C A 255 1.00 63 62 0 33 33 @AaaaaaAaaaaaaAAAAAAAaaaaaAaaaaAaa point 0 nongenic -14063 upstream {C09G1.4} 3895 CB6648_redo X 16029144 1 A C 228 1.00 63 62 0 16 16 @cccccccccccccccc point 0 nongenic -1579 upstream {B0395.2} 3896 CB6648_redo X 16029151 1 T C 195 0.00 63 62 0 10 10 @cccccccccc point 0 nongenic -1572 upstream {B0395.2} 3899 CB6648_redo X 16102626 1 T G 255 1.00 63 62 0 46 46 @ggGgGGGgggGgGgGGGGGggGgGgGgGGgGggggggggGgGGGGg point 0 SNP none {CE6-235,haw111583} 3900 CB6648_redo X 16120770 1 G A 161 1.00 63 44 2 6 8 @AaaAaA., point 0 nongenic 2900 into {ZK1073.2} 3901 CB6648_redo X 16120773 1 A T 44 1.00 63 62 2 4 6 @tTtT., point 0 nongenic 2897 into {ZK1073.2} 3903 CB6648_redo X 16224804 1 A G 54 1.69 63 34 0 4 4 @ggGg point 0 nongenic -4575 upstream {F23A7.5} 3909 CB6648_redo X 16225133 1 T C 118 1.00 63 62 0 4 4 @CCCC point 0 nongenic -4246 upstream {F23A7.5} 3910 CB6648_redo X 16225141 1 T C 132 1.19 63 62 0 5 5 @CCCCC point 0 nongenic -4238 upstream {F23A7.5} 3911 CB6648_redo X 16255156 1 G T 255 1.00 63 62 0 19 19 @ttTTTtTTTtTTTTTTTtT point 0 nongenic,nongenic 226 into,398 into {W10G6.2a.2,W10G6.2b},{W10G6.2a.1} 3914 CB6648_redo X 16255728 1 T C 209 2.19 63 62 0 11 11 @CCCCCCCCCCC point 0 nongenic,nongenic 798 into,970 into {W10G6.2a.2,W10G6.2b},{W10G6.2a.1} 3915 CB6648_redo X 16255860 1 T A 232 1.00 63 62 0 16 16 @AAAAAAAAAAAAAAAA point 0 SNP none {haw111737} 4801 CB6648_redo X 16256026 0 X X -1000 -999.99 -1000 -1000 5 0 5 @,,,,,cccCCC indel 0 nongenic,nongenic -1095 downstream,-1267 downstream {W10G6.2a.2,W10G6.2b},{W10G6.2a.1} 3916 CB6648_redo X 16302440 1 T A 255 5.56 63 62 0 22 22 @AGAaaaAaAAAaaaAaAAAAAA point 0 nongenic,nongenic,nongenic -15764 upstream,-3941 upstream,1601 into {F52E10.4},{T01B4.2b},{T01B4.1} 3917 CB6648_redo X 16305598 1 T G 14 1.38 63 46 13 16 29 @.,,,.,.,....,ggGGGGGGGGggGGGg point 0 nongenic -783 upstream {T01B4.2b} 3919 CB6648_redo X 16460133 1 C A 255 1.00 63 62 0 42 42 @AaAAaaaAAaaAAAAAAAaAaAAAAAAaAaaaaaAaAAaAaa point 0 SNP none {haw111863} 3920 CB6648_redo X 16460180 1 C A 255 1.00 63 62 0 38 38 @AAaAaaAAAAAAAaAAAAaAaAAaaAAAAaaAAAaaaA point 0 SNP none {haw111864} 3923 CB6648_redo X 16531637 1 G T 21 1.00 63 42 0 4 4 @CCCT point 0 nongenic -5114 upstream {T27B1.2.1} 3924 CB6648_redo X 16532012 1 G C 14 1.00 63 62 3 3 6 @CC.C.. point 0 nongenic -4739 upstream {T27B1.2.1} 3925 CB6648_redo X 16608719 1 G A 98 1.00 63 62 4 7 11 @,,,.AaAaAaa point 0 nongenic,nongenic,nongenic -4646 upstream,-6084 upstream,723 into {C06G1.4.1},{F59C12.4},{F59C12.3} 3926 CB6648_redo X 16661001 1 G T 61 1.00 63 30 0 4 4 @tttt point 0 silent CGA->AGA[Arg->Arg] {F43B10.1} 3927 CB6648_redo X 16687504 1 A G 210 1.31 63 62 7 15 22 @,.,,,,,ggGGgggGGggGGgg point 0 nongenic,nongenic -1879 upstream,825 into {F22H10.4},{F22H10.5} 3928 CB6648_redo X 16787261 1 A T 255 1.00 63 62 0 43 43 @tTTtTTttttTtTtttTtTTTtTTtTttttTtTTtTTTTttTt point 0 SNP none {haw111929} 3929 CB6648_redo X 16817032 1 T C 255 1.00 63 62 0 24 24 @cCCcCCCcCCCCccccCCCcCcCC point 0 missense AAA->GAA[Lys->Glu] {F41G4.3a,F41G4.3b} 3932 CB6648_redo X 16981415 1 T C 142 1.00 63 62 0 6 6 @CCCCCC point 0 SNP none {haw111956} 3934 CB6648_redo X 17025320 1 A T 255 1.00 63 62 0 15 15 @tTTtTTTTTTTTTTT point 0 nongenic,nongenic,nongenic -4597 upstream,1098 into,3583 into {F35B3.4},{F35B3.5b},{F35B3.5a} 3935 CB6648_redo X 17047302 1 C T 255 1.00 63 62 0 24 24 @tTTttTTTttTTTTTTTttTTTtt point 0 missense GAG->AAG[Glu->Lys] {C30G4.3.1,C30G4.3.2} 3936 CB6648_redo X 17047309 1 T C 255 1.00 63 62 0 21 21 @CCccCCCCCCCccCCCccccc point 0 silent GAA->GAG[Glu->Glu] {C30G4.3.1,C30G4.3.2} 3937 CB6648_redo X 17047323 1 G T 255 1.00 63 62 0 17 17 @TTTttttttttttTTtt point 0 missense CAG->AAG[Gln->Lys] {C30G4.3.1,C30G4.3.2} 3940 CB6648_redo X 17105478 1 G C 255 1.00 63 62 0 23 23 @CcccCcccccCCCccccCccccc point 0 nongenic -690 upstream {C08A9.8} 3941 CB6648_redo X 17168879 1 A G 255 1.19 63 62 0 25 25 @gggggGgGGggGggGgGGgGgggGg point 0 nongenic -11005 upstream {T23C6.5} 4805 CB6648_redo X 17228978 0 X X -1000 -999.99 -1000 -1000 3 1 4 @,.,GGG indel 0 inframe none {T25G12.6} 3949 CB6648_redo X 17443493 1 C T 39 7.88 34 30 8 8 16 @........ttTTTttt point 0 nongenic -8813 upstream {C36E6.2} 3950 CB6648_redo X 17443799 1 A C 3 2.81 0 12 0 5 5 @cgccc point 0 nongenic -8507 upstream {C36E6.2} 3960 CB6648_redo X 17444362 1 A C 68 5.06 30 62 0 12 12 @CCCCCCCCcccC point 0 nongenic -7944 upstream {C36E6.2} 3961 CB6648_redo X 17444421 1 A C 16 2.00 0 16 0 9 9 @CCCCCCCCC point 0 nongenic -7885 upstream {C36E6.2} 3963 CB6648_redo X 17444481 1 G C 22 2.00 0 22 0 10 10 @CCCCCCccCC point 0 nongenic -7825 upstream {C36E6.2} 3968 CB6648_redo X 17621416 1 A T 255 1.12 63 62 0 30 30 @tTtttTtTTTTTTTttttttTTttTTtTtT point 0 SNP none {haw112084} 3969 CB6648_redo X 17715334 1 G A 255 1.00 63 62 0 40 40 @AaAAAAAAaAAAaAAAaaAAAAaaaAaaaAaaAAAaaAAA point 0 nongenic,nongenic,nongenic 455 into,457 into,589 downstream {cTel55X.1a.2,cTel55X.1b},{cTel55X.1a.1},{6R55.2}