id mutant_strain dna start length reference_base sample_base consensus_score loci_multiplicity mapping_quality neighbor_quality number_wildtype_reads number_variant_reads sequencing_depth sample_reads variant_type indel_size classes descriptions parent_features 2 CB6841_redo I 200948 1 A T 255 1.00 63 62 0 16 16 @tTtTTttttttTtttt point 0 SNP none {haw293} 3 CB6841_redo I 200949 1 C T 255 1.00 63 62 0 16 16 @tTtTTttttttTtttt point 0 SNP none {haw294} 9 CB6841_redo I 229295 1 G A 14 1.00 63 62 29 35 64 @A.A,.,AA.,AA,AAAAA.,.A.a.a,A.a.a,Aaaa,,aaa.A,.,,..AaaAa.a.aAaa,, point 0 missense CCC->CTC[Pro->Leu] {Y48G1BM.6} 10 CB6841_redo I 230024 1 C G 35 1.00 63 62 23 29 52 @g.gGgg.gGg...Gg..GG.GGG,g.,.,.gGg,g,Gg.g.gggg,,...GG point 0 missense GGA->GCA[Gly->Ala] {Y48G1BM.6} 12 CB6841_redo I 232261 1 G T 24 1.00 63 62 14 17 31 @T,T.tT.T,,Tt,,tT.TT,t..TttTt.,. point 0 SNP none {pas12126} 13 CB6841_redo I 232358 1 C T 14 1.00 63 62 23 27 50 @,,.,t..,t.,Ttt.TttTTTt..t,TttTtTTt,.,.,.tt,,Ttt,.t point 0 nongenic,nongenic -10783 upstream,3269 into {Y48G1BL.6},{Y48G1BM.6} 24 CB6841_redo I 316117 1 T G 255 1.00 63 62 0 16 16 @GGGGgGGgGGgGGggg point 0 SNP none {haw435,uCE1-530} 30 CB6841_redo I 361325 1 C A 255 1.00 63 62 0 25 25 @AaaaAAaaAAAaaAAAAaAaAAAAA point 0 missense AAG->AAT[Lys->Asn] {R119.1} 31 CB6841_redo I 369897 1 T C 183 1.62 63 62 1 9 10 @cC,ccccCcc point 0 nongenic 1525 into {R119.2} 36 CB6841_redo I 469440 1 C T 255 1.00 63 62 0 28 28 @TtTttTtttttTttTttTTttTTTTttt point 0 nongenic,nongenic -2305 upstream,-8174 upstream {W04C9.5},{W04C9.3} 37 CB6841_redo I 488911 1 G A 255 1.00 63 62 0 18 18 @aaAAAAaAAaAaAAAaaA point 0 silent CTG->CTA[Leu->Leu] {W04C9.2} 38 CB6841_redo I 531488 1 G A 237 1.00 63 62 0 12 12 @aAAAAAaAAAAA point 0 nongenic,nongenic,nongenic -2972 upstream,-9930 upstream,920 into {Y65B4BR.8},{Y65B4BL.6a},{Y65B4BL.1} 45 CB6841_redo I 580364 1 G A 255 1.00 63 62 0 19 19 @aAaAAaaAaaaAAaAAAAA point 0 nongenic -5241 upstream {Y65B4BR.6a} 161878 CB6841_redo I 670410 85 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3922 to 4007 bp into {Y18H1A.14} 56 CB6841_redo I 717046 1 T C 7 1.00 63 62 2 2 4 @.,cc point 0 nongenic,nongenic -1192 upstream,895 downstream {Y18H1A.3},{Y18H1A.7} 57 CB6841_redo I 742850 1 T C 19 1.00 63 52 1 3 4 @Ccc. point 0 silent GAA->GAG[Glu->Glu] {Y18H1A.13} 58 CB6841_redo I 765647 1 G A 255 1.00 63 62 0 31 31 @AAaAAaAaAaaaAAAAAAAAaaaaaaaaaaa point 0 silent GAG->GAA[Glu->Glu] {T06A4.3a,T06A4.3b} 59 CB6841_redo I 774906 1 G T 47 1.00 63 16 1 5 6 @TttTT, point 0 nongenic,nongenic,nongenic -28463 upstream,1441 into,1451 into {ZC123.3},{T06A4.1b},{T06A4.1a} 61 CB6841_redo I 921229 1 G A 255 1.00 63 62 0 19 19 @aAaAaaAaaaAaaaaAaAa point 0 nongenic,nongenic,nongenic,nongenic -17255 upstream,-2079 upstream,5336 into,5651 into {Y95B8A.2},{Y95B8A.12a},{Y95B8A.12d,Y95B8A.12e},{Y95B8A.12c,Y95B8A.12f} 66 CB6841_redo I 968802 1 G C 255 1.00 63 62 0 17 17 @cCCCcccccCCCccccc point 0 nongenic,nongenic,nongenic,nongenic -11426 upstream,627 into,879 downstream,906 downstream {Y34D9B.1a},{F54A5.2},{F54A5.3a},{F54A5.3d} 69 CB6841_redo I 1009208 1 A C 93 1.00 63 36 0 4 4 @CCcc point 0 nongenic 1560 into {C54G6.2} 72 CB6841_redo I 1028195 1 C T 132 1.19 63 62 0 5 5 @TtTtt point 0 nongenic 1718 into {Y34D9A.1} 74 CB6841_redo I 1074823 1 A T 54 1.00 63 54 0 4 4 @CttT point 0 three_prime_UTR none {R06A10.2.1} 75 CB6841_redo I 1074824 1 T C 78 1.00 63 54 0 5 5 @CccCc point 0 three_prime_UTR none {R06A10.2.1} 77 CB6841_redo I 1142103 1 C A 255 1.00 63 62 0 28 28 @AaaaaAaAAAaAAAAAaAaAaaaaaAaA point 0 missense,SNP GGT->TGT[Gly->Cys],none {Y48G8AL.10},{haw1570} 80 CB6841_redo I 1198858 1 G A 255 1.00 63 62 0 26 26 @AaaAAAAaaaaAaAAaAAAaAAAAAa point 0 missense GGG->GAG[Gly->Glu] {Y48G8AL.5} 81 CB6841_redo I 1212519 1 G A 255 1.00 63 62 0 27 27 @AaAAaAAAAAAaaAAaaAaAAAaAaaa point 0 nongenic 1026 into {Y48G8AL.1} 84 CB6841_redo I 1271491 1 G A 255 1.00 63 62 0 13 13 @aaaAAAAAAAAaa point 0 nongenic,nongenic -10610 upstream,-3334 upstream {Y48G8AR.2},{Y48G8AR.1} 85 CB6841_redo I 1288281 1 G C 4 1.00 63 2 3 4 7 @CCC.C,. point 0 nongenic,nongenic -17294 upstream,445 downstream {K12C11.4},{Y48G8AR.3} 86 CB6841_redo I 1302563 1 G T 211 1.62 63 62 2 11 13 @,Tt.ttttTTtTt point 0 nongenic -3012 upstream {K12C11.4} 87 CB6841_redo I 1334428 1 G A 255 2.12 63 62 1 29 30 @aaaaaaAaaAA,AAAAaaAaAaaAaaaAaa point 0 nongenic,nongenic -967 upstream,353 downstream {K12C11.3},{K12C11.5} 89 CB6841_redo I 1361228 1 T C 14 1.00 63 34 2 5 7 @CCCCC.. point 0 nongenic -4081 upstream {Y92H12BL.5} 90 CB6841_redo I 1373815 1 T G 3 1.00 63 0 0 4 4 @GCGg point 0 nongenic 1877 into {Y92H12BL.5} 92 CB6841_redo I 1373821 1 C G 3 1.00 63 0 0 4 4 @Ggtg point 0 nongenic 1871 into {Y92H12BL.5} 96 CB6841_redo I 1382017 1 T A 39 1.31 63 4 1 3 4 @.AAA point 0 nongenic 3042 into {Y92H12BL.4} 100 CB6841_redo I 1395683 1 G A 255 1.00 63 62 0 17 17 @AAAAAAAaaaaaAaAaa point 0 nongenic,nongenic,nongenic -10261 upstream,-2922 upstream,1114 into {Y92H12BR.6},{Y92H12BM.1},{Y92H12BR.7} 161879 CB6841_redo I 1440206 59 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3926 to 3985 bp into {Y92H12BR.8} 108 CB6841_redo I 1557442 1 G A 255 1.00 63 62 0 31 31 @aaAAAaAaaAaAAaAaaAAaAaaAAAaAAAa point 0 nongenic -9489 upstream {Y92H12A.1} 109 CB6841_redo I 1558761 1 G A 179 1.00 63 62 0 12 12 @TTaaaAaaaAAa point 0 nongenic -8170 upstream {Y92H12A.1} 112 CB6841_redo I 1583181 1 G A 255 1.00 63 62 0 18 18 @AAaAAAAAAaAaaAAAaA point 0 nongenic -2986 upstream {Y73E7A.3} 161880 CB6841_redo I 1659435 69 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1506 to 1575 bp into {Y71G12B.33} 161881 CB6841_redo I 1659751 90 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1169 to 1259 bp into {Y71G12B.33} 144 CB6841_redo I 1766667 1 C A 36 1.00 63 62 5 7 12 @A,A,,,a,aaaa point 0 SNP none {haw2683} 145 CB6841_redo I 1864004 1 T C 255 1.19 63 62 0 18 18 @CCCCccCCccCcCccCCC point 0 SNP none {haw2851} 153 CB6841_redo I 2018076 1 G A 255 1.00 63 62 0 25 25 @TAaaaaaaaaaAAaAaaaaAAaAaa point 0 nongenic,nongenic -7594 upstream,-8241 upstream {Y20F4.3},{Y20F4.2} 154 CB6841_redo I 2033983 1 A G 97 1.00 63 62 2 7 9 @,G,GGgGGG point 0 nongenic,nongenic 32 downstream,401 downstream {Y20F4.2},{Y20F4.4} 155 CB6841_redo I 2033985 1 G A 129 1.00 63 62 2 9 11 @,A,AAaAAAAA point 0 nongenic,nongenic 34 downstream,399 downstream {Y20F4.2},{Y20F4.4} 156 CB6841_redo I 2074080 1 C T 255 1.00 63 62 0 21 21 @AttTttttTttTTTTTTTTTt point 0 nongenic,nongenic,nongenic -4880 upstream,1399 into,1402 into {Y37E3.11a},{Y37E3.10.2},{Y37E3.10.1} 158 CB6841_redo I 2181141 1 A T 255 1.00 63 62 0 13 13 @TtttttttTTTTT point 0 SNP none {haw3387} 159 CB6841_redo I 2194824 1 G A 255 1.00 63 62 0 17 17 @AaaaAaaaaAaAaAAaa point 0 nongenic,nongenic,nongenic,nongenic -3155 upstream,10528 into,14807 into,7816 into {W03F11.6b},{W03F11.6c},{W03F11.6a},{W03F11.6d} 163 CB6841_redo I 2348241 1 G A 255 1.00 63 62 0 29 29 @AaAAAaaaaAaAAAAAAaaaAAAaaaAaA point 0 missense GCA->ACA[Ala->Thr] {Y39G10AR.5} 164 CB6841_redo I 2379643 1 C T 255 1.00 63 62 0 21 21 @TttTTTTttTTTtTtTtTttt point 0 missense,SNP ATG->ATA[Met->Ile],none {Y39G10AR.17},{snp_Y39G10AR[4]} 171 CB6841_redo I 2568367 1 C T 255 1.00 63 62 0 23 23 @TttttTTTtTTttTTTtttTTTt point 0 nongenic -393 upstream {C55C2.1} 172 CB6841_redo I 2568368 1 G A 255 1.00 63 62 0 23 23 @AaaaaAAAaAAaaAAAaaaAAAa point 0 nongenic -392 upstream {C55C2.1} 173 CB6841_redo I 2579329 1 A T 255 1.00 63 62 0 22 22 @TtttttttttTtTtTttTtTTt point 0 nongenic -3307 upstream {C55C2.5a,C55C2.5b,C55C2.5c} 174 CB6841_redo I 2592707 1 G A 255 1.00 63 62 0 34 34 @aAAAaAaAaaaAAAAAaaAAAAaAAAAaAaAAAa point 0 nongenic,nongenic,nongenic -1824 upstream,-7272 upstream,2575 into {K07A3.2b},{K07A3.3b},{K07A3.2a} 176 CB6841_redo I 2658526 1 G T 3 1.00 63 0 1 3 4 @T,Tt point 0 nongenic,nongenic -1283 upstream,-9634 upstream {F40E3.5.2},{F32B5.6d.1} 177 CB6841_redo I 2710697 1 T C 255 1.00 63 62 0 22 22 @CccCCCCcCCCccCcCCccCCC point 0 SNP none {haw4255} 178 CB6841_redo I 2774945 1 G A 255 1.00 63 62 0 22 22 @AaaAaAAAaaaAaAaaAaaaAA point 0 missense GGT->GAT[Gly->Asp] {Y71F9B.1} 179 CB6841_redo I 2777373 1 C G 225 1.00 63 62 0 16 16 @GgGgGGGGGGgggggg point 0 five_prime_UTR,silent none,GCG->GCC[Ala->Ala] {Y71F9B.13c},{Y71F9B.13a,Y71F9B.13b} 184 CB6841_redo I 2837780 1 G A 255 1.00 63 62 0 24 24 @aAaaAaAaAAaAaaAAaaacAaaa point 0 nongenic,nongenic -4525 upstream,-8940 upstream {W10C8.3},{W10C8.1} 185 CB6841_redo I 2889894 1 A G 198 1.00 63 62 0 16 16 @gggggggggggggggg point 0 nongenic,nongenic,nongenic -552 upstream,3826 into,458 downstream {Y71F9AL.6},{Y71F9AL.16},{Y71F9AL.7} 186 CB6841_redo I 3089105 1 G A 255 1.00 63 62 0 26 26 @aAAAaAAAaAaaaaaAaaAaaAaaAA point 0 nongenic,nongenic -4227 upstream,4092 into {M01B12.4a.1},{M01B12.5a} 188 CB6841_redo I 3146645 1 C T 255 7.94 63 62 0 17 17 @TTTttTttTtTTTtttT point 0 nongenic,nongenic,nongenic -1351 upstream,-3468 upstream,1150 into {K09H9.2.1},{K09H9.5},{K09H9.6} 191 CB6841_redo I 3258597 1 A G 35 1.69 63 10 2 7 9 @GggGGgg,, point 0 nongenic -1274 upstream {Y44E3B.2} 192 CB6841_redo I 3258598 1 G T 19 3.00 63 10 3 4 7 @TTtt,,, point 0 nongenic -1273 upstream {Y44E3B.2} 193 CB6841_redo I 3259013 1 C T 3 6.94 0 18 2 10 12 @.T,TTTTTTTTT point 0 nongenic -858 upstream {Y44E3B.2} 5402 CB6841_redo I 3259387 0 X X -1000 -999.99 -1000 -1000 8 -5 3 @,,,,....cCc indel 0 nongenic -485 upstream {Y44E3B.2} 198 CB6841_redo I 3444846 1 G T 3 1.00 63 22 3 5 8 @TTTT.,c. point 0 nongenic,nongenic,nongenic -2656 upstream,-4481 upstream,2860 into {Y47G6A.13},{Y47G6A.11},{Y47G6A.28} 199 CB6841_redo I 3485158 1 C A 6 1.00 63 62 2 2 4 @Aa,, point 0 nongenic 657 downstream {Y47G6A.8} 203 CB6841_redo I 3746742 1 C T 255 1.00 63 62 0 17 17 @tttTTttTtTttTttTT point 0 silent GGC->GGT[Gly->Gly] {Y8G1A.1b} 204 CB6841_redo I 3752020 1 T C 255 1.00 63 62 0 27 27 @CcCCCcccCcCcCCCccCCcCCCCcCC point 0 nongenic 1941 into {Y8G1A.2} 205 CB6841_redo I 3885008 1 A G 255 1.00 63 62 0 22 22 @GgGggGgggGGGggGGGggGGG point 0 SNP none {haw5911} 206 CB6841_redo I 3885020 1 A G 255 1.00 63 62 0 16 16 @ggGGGggGGGggGGGg point 0 SNP none {haw5912} 211 CB6841_redo I 3935098 1 T C 250 1.12 63 62 0 16 16 @ccCcCCCCCCCCCCCC point 0 nongenic,nongenic 184 downstream,305 downstream {T21E3.3},{T21E3.1} 212 CB6841_redo I 3935121 1 A C 209 1.62 63 62 0 11 11 @CCCCCCCCCcC point 0 nongenic,nongenic 161 downstream,328 downstream {T21E3.3},{T21E3.1} 213 CB6841_redo I 3935148 1 G C 255 1.38 63 62 0 17 17 @CCCCcCCcccCCCCccc point 0 nongenic,nongenic 134 downstream,355 downstream {T21E3.3},{T21E3.1} 214 CB6841_redo I 3990146 1 T C 107 3.81 63 62 81 99 180 @CCC,Cc,,C,CcC,,,..CCCC.,C,,CC,CCCCCCC,,CCCCCCCC,C,,C,CCCC,,,Cc,CC,CCC,,C,,,,C,C,C,CCCCC,,CC,,,C,CC, point 0 nongenic -5564 upstream {F28H1.1} 215 CB6841_redo I 3990323 1 T C 189 3.12 63 62 98 157 255 @C..cC..C.,C.C,Cc,.,,,.,.cCCCCCCc...C,CCCccCCCCCC,cccc.CCCCCCCC.cc.cCCC,CC,.c.c,,CCC,C.c..,CCCCCC.CC point 0 nongenic -5387 upstream {F28H1.1} 217 CB6841_redo I 3990559 1 T C 62 2.62 63 62 65 190 255 @C..c....cc.cCccc.ccc..,Ccccc..cccccCccc.cCCcccc.ccccccCC,CCcc.c.ccc,CC.c.ccccc,.ccccccccc.ccc.ccccc point 0 nongenic -5151 upstream {F28H1.1} 218 CB6841_redo I 4127917 1 G A 255 1.00 63 62 0 24 24 @AAAAaaaAAaAAAAAAAAAAaAAA point 0 SNP none {haw6028} 220 CB6841_redo I 4225924 1 C T 255 1.00 63 62 0 18 18 @tTTttTTTTtTtTttTtT point 0 nongenic,nongenic -10169 upstream,-3653 upstream {C18E3.9a},{C43E11.6a.2,C43E11.6d.1,C43E11.6d.2,C43E11.6e.2} 221 CB6841_redo I 4311736 1 C T 255 1.00 63 62 0 35 35 @TttTTttTTtTTttTTTTTTTttTTttTtTtTTtt point 0 nongenic -9359 upstream {ZK973.6} 225 CB6841_redo I 4476753 1 C A 178 1.00 63 62 0 10 10 @aaaaaaaaaa point 0 SNP none {haw6315} 279 CB6841_redo I 4546476 1 G T 8 6.00 39 34 4 4 8 @AT,,,,Tc point 0 nongenic,nongenic -4002 upstream,-6767 upstream {Y119C1B.3},{Y119C1B.9} 286 CB6841_redo I 4757072 1 C T 255 1.00 63 62 0 31 31 @ttTTTTTttTTTtTttTttttTttttTtTtt point 0 missense TCC->TTC[Ser->Phe] {C10H11.1} 287 CB6841_redo I 4765803 1 G T 74 3.50 52 62 1 3 4 @ttt, point 0 premature_stop GAA->TAA[Glu->stop] {M04F3.2} 288 CB6841_redo I 4765811 1 C G 77 3.50 52 62 1 3 4 @ggg, point 0 missense TGC->TGG[Cys->Trp] {M04F3.2} 295 CB6841_redo I 5099421 1 C T 255 1.00 63 62 0 33 33 @TTtTTtttTTTtTtttttTttttttttTTTTTt point 0 missense CCT->TCT[Pro->Ser] {C30F8.3} 296 CB6841_redo I 5106588 1 C T 255 1.00 63 62 0 19 19 @TTttTTTtTTtTtttTttt point 0 silent GTC->GTT[Val->Val] {Y110A7A.11} 305 CB6841_redo I 5221052 1 C A 255 1.00 63 62 0 25 25 @AAAaAAaAaAAAAaaAaAaAaAAAA point 0 nongenic -5830 upstream {C32E12.5.1} 308 CB6841_redo I 5256294 1 G C 14 1.00 63 0 0 4 4 @Cccc point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -5853 upstream,-7402 upstream,590 into,607 into,6700 into,7134 into {B0261.5},{B0261.1},{B0261.6b},{B0261.6a},{B0261.2a},{B0261.2b} 310 CB6841_redo I 5299838 1 C T 255 1.00 63 62 0 21 21 @TTTtTtttTttttttTttttt point 0 missense GAA->AAA[Glu->Lys] {C01G8.6} 311 CB6841_redo I 5301101 1 C A 255 1.00 63 62 0 20 20 @AaAAAaAaaaAAAaaaAaaa point 0 SNP,three_prime_UTR none,none {haw6781,uCE1-872},{C01G8.9a} 312 CB6841_redo I 5448372 1 A T 255 1.00 63 62 0 32 32 @TTTtTTTTTTtTttTTttTttTtttttTttTt point 0 SNP none {haw6835} 313 CB6841_redo I 5451259 1 G A 255 1.75 34 62 1 21 22 @AaA,aAAaaaaAAaaaaaAAAA point 0 nongenic -4400 upstream {F27C1.13} 314 CB6841_redo I 5582316 1 C T 255 1.00 63 62 0 31 31 @tTtttttttTtTtTTTTTTTTtTttTTTTTt point 0 missense ACC->ATC[Thr->Ile] {M01E11.1} 315 CB6841_redo I 5590737 1 A C 47 1.00 63 62 2 4 6 @,,CcCc point 0 nongenic,nongenic,nongenic -1153 upstream,126 into,6517 into {M01E11.7b.1},{M01E11.7d},{M01E11.7a,M01E11.7c} 316 CB6841_redo I 6139031 1 A T 255 3.94 63 62 0 21 21 @tttttTtttttTttTtTTTTT point 0 nongenic,nongenic 186 downstream,73 downstream {F56F4.6},{F56F4.4} 318 CB6841_redo I 6163210 1 T A 255 1.00 63 62 0 28 28 @aaAaAaaAAaaaAAaaaaaAAaAaAAAa point 0 SNP none {haw7231} 319 CB6841_redo I 6163280 1 T C 76 1.00 63 52 1 3 4 @CCC. point 0 nongenic -1612 upstream {T09B4.7} 326 CB6841_redo I 6310219 1 C T 255 1.00 63 62 0 31 31 @TTtttTTttTTttTttTtTtTttTTtTtTTT point 0 silent ACC->ACT[Thr->Thr] {F26B1.5} 327 CB6841_redo I 6466152 1 C T 255 1.00 63 62 0 21 21 @tTttTtTTttTTTTTTttTTt point 0 nongenic,nongenic,nongenic -440 upstream,-699 upstream,792 into {K06A5.6.1},{K06A5.3},{K06A5.6.2} 328 CB6841_redo I 6518213 1 G C 255 1.00 63 62 0 26 26 @cCCcCcCCccCCcCcCCcCcCccccc point 0 nongenic,nongenic,nongenic 638 into,704 downstream,707 downstream {C55B7.12a,C55B7.12b},{C55B7.1.1},{C55B7.1.2} 331 CB6841_redo I 6534484 1 C T 255 1.00 63 62 0 37 37 @tTttTttTtTTTTTttTTtTtTtttttTtttTTTTtT point 0 nongenic,nongenic -1451 upstream,412 into {T10E9.7a},{T10E9.3} 333 CB6841_redo I 6820252 1 T C 255 1.00 63 62 0 23 23 @CcCccCCCccCCCccCcCCCCcC point 0 SNP none {haw7362} 334 CB6841_redo I 6913792 1 C T 255 1.00 63 62 0 18 18 @TTTTTTTttTtttTttTt point 0 nongenic,nongenic -1253 upstream,-213 upstream {C48B6.3.1},{C48B6.6a,C48B6.6b} 335 CB6841_redo I 6949307 1 A G 255 1.69 63 62 0 24 24 @tGgGGGGgGGGgggggggggGggg point 0 nongenic,nongenic,nongenic,nongenic -1826 upstream,-3949 upstream,1151 into,814 into {T10B11.1},{T10B11.6},{T10B11.7a},{T10B11.7b} 336 CB6841_redo I 6949331 1 T A 255 2.06 63 62 0 19 19 @AaaaaaaaaaAaaaaaAaa point 0 nongenic,nongenic,nongenic,nongenic -1802 upstream,-3973 upstream,1127 into,790 into {T10B11.1},{T10B11.6},{T10B11.7a},{T10B11.7b} 337 CB6841_redo I 7140681 1 G T 255 1.00 63 62 0 24 24 @TTtTtTTtTTtTttTttttttttt point 0 nongenic,nongenic -708 upstream,405 into {K10D3.4},{H37N21.1} 338 CB6841_redo I 7140819 1 T C 255 1.00 63 62 0 22 22 @CCCcccCCCCCCcCcCCCCCCC point 0 SNP none {haw7427} 339 CB6841_redo I 7140831 1 A T 255 1.00 63 62 0 21 21 @TTTTTTtTtTTTTTTTTTTTT point 0 SNP none {haw7428} 340 CB6841_redo I 7301404 1 C G 255 1.00 63 62 0 23 23 @gGGGGggggggggggGggGgggg point 0 missense GGC->GCC[Gly->Ala] {F13G3.5a,F13G3.5b.1,F13G3.5b.2} 342 CB6841_redo I 7428554 1 T C 255 1.00 63 62 0 28 28 @cCCCCccCcCCCCCcCcCcCCCCCCcCc point 0 SNP none {haw7535} 344 CB6841_redo I 7547117 1 A T 255 1.00 63 62 0 24 24 @ttTtTTtTtTtttTtTtTtttttt point 0 SNP none {haw7629} 345 CB6841_redo I 7547127 1 A T 255 1.00 63 62 0 26 26 @TtTTtTtTtttTtTtTttttttTTtT point 0 SNP none {haw7630} 346 CB6841_redo I 7547365 1 C A 255 1.00 63 62 0 20 20 @AAaaaAAAAAaAAaaAaaAa point 0 SNP none {haw7631} 350 CB6841_redo I 7753373 1 T G 5 1.00 63 18 2 3 5 @,,gGG point 0 nongenic -2403 upstream {F58H10.1} 351 CB6841_redo I 7753374 1 G C 18 1.00 63 4 1 3 4 @,cCC point 0 nongenic -2402 upstream {F58H10.1} 358 CB6841_redo I 7799575 1 C T 255 1.00 63 62 0 23 23 @ttTTTtttTtttTttTtTtTTTt point 0 nongenic,nongenic -6041 upstream,870 downstream {D2005.6},{D2005.2} 363 CB6841_redo I 7869008 1 T A 87 1.00 63 46 0 5 5 @aAAaA point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -1095 upstream,-749 upstream,2533 into,2614 into,2657 into,2659 into,2668 into,2832 into,2883 into {R11A5.6},{R11A5.4c.1},{R11A5.4d.5},{R11A5.4a.1,R11A5.4a.2,R11A5.4b.2},{R11A5.4c.2},{R11A5.4c.3,R11A5.4d.1,R11A5.4d.3,R11A5.4d.4,R11A5.4d.6},{R11A5.4d.2},{R11A5.4c.4},{R11A5.4b.1} 364 CB6841_redo I 7869009 1 C T 87 1.00 63 62 0 5 5 @tTTtT point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -1096 upstream,-748 upstream,2534 into,2615 into,2658 into,2660 into,2669 into,2833 into,2884 into {R11A5.6},{R11A5.4c.1},{R11A5.4d.5},{R11A5.4a.1,R11A5.4a.2,R11A5.4b.2},{R11A5.4c.2},{R11A5.4c.3,R11A5.4d.1,R11A5.4d.3,R11A5.4d.4,R11A5.4d.6},{R11A5.4d.2},{R11A5.4c.4},{R11A5.4b.1} 365 CB6841_redo I 7879475 1 C T 190 1.00 63 62 0 8 8 @TTttttTt point 0 SNP none {haw7930} 366 CB6841_redo I 7879517 1 G A 173 1.00 63 62 0 6 6 @AAaaaA point 0 nongenic,nongenic -3962 upstream,-4828 upstream {R11A5.7.1},{F55D12.1} 367 CB6841_redo I 7879522 1 A T 192 1.00 63 62 0 7 7 @TTtttTT point 0 nongenic,nongenic -3967 upstream,-4823 upstream {R11A5.7.1},{F55D12.1} 369 CB6841_redo I 8202408 1 G T 255 1.00 63 62 0 19 19 @ttttTttttttTTtTTTtT point 0 nongenic,nongenic,nongenic,nongenic -19481 upstream,-3045 upstream,6072 into,6326 into {F08A10.2},{F08A10.1b,F08A10.1c},{F08A10.1a,F08A10.1e},{F08A10.1d} 371 CB6841_redo I 8280214 1 A G 8 1.00 63 62 3 8 11 @GggGGGGG... point 0 nongenic,nongenic,nongenic,nongenic -1765 upstream,4339 into,4556 into,4575 into {T01G9.3},{T01G9.2b.2},{T01G9.2a},{T01G9.2b.1} 372 CB6841_redo I 8303619 1 T C 255 1.00 63 62 0 31 31 @cCCCCccCcCcccccCCcCCccccCCcCccc point 0 nongenic,nongenic,nongenic 2796 into,2878 into,3940 into {F52B5.1c},{F52B5.1b},{F52B5.1a} 5413 CB6841_redo I 8347873 0 X X -1000 -999.99 -1000 -1000 2 2 4 @.,aa indel 0 nongenic,nongenic -1857 upstream,-5530 upstream {C34B7.3},{F16D3.1} 382 CB6841_redo I 8749234 1 A G 17 1.00 63 2 0 6 6 @GGGGGg point 0 nongenic,nongenic -2315 upstream,424 downstream {C36B1.9},{C36B1.10} 383 CB6841_redo I 8749236 1 A G 4 1.00 63 0 1 4 5 @GGG,g point 0 nongenic,nongenic -2317 upstream,422 downstream {C36B1.9},{C36B1.10} 387 CB6841_redo I 9039720 1 A G 255 1.00 63 62 0 24 24 @GGgGgGgGGgggGGGggGGGGGGG point 0 SNP none {haw8746} 388 CB6841_redo I 9097713 1 C T 255 1.00 63 62 1 20 21 @TttTTTtt,TTTTTTttTTTt point 0 nongenic,nongenic -11494 upstream,1765 into {T06D10.3},{W10D5.1} 391 CB6841_redo I 9235193 1 C T 255 1.00 63 62 0 14 14 @ttttTTTTTTtTtt point 0 SNP none {haw8914} 392 CB6841_redo I 9235318 1 G A 255 1.00 63 62 0 21 21 @aAaAAAAaAaaAaAAaaAaAA point 0 SNP none {haw8915} 393 CB6841_redo I 9235427 1 G A 255 1.00 63 62 0 20 20 @AaaAaAaAaAaAaaAAaAaa point 0 nongenic,nongenic,nongenic -1877 upstream,1258 into,758 into {VF36H2L.1},{F36H2.1b},{F36H2.1a,F36H2.1c} 394 CB6841_redo I 9246865 1 C G 255 1.00 63 62 0 24 24 @gGgGggGgGGGggGGgGggGGggg point 0 missense,SNP CGT->CCT[Arg->Pro],none {F36H2.2},{haw8926} 395 CB6841_redo I 9246866 1 G C 255 1.00 63 62 0 24 24 @cCcCccCcCCCccCCcCccCCccc point 0 missense,SNP CGT->GGT[Arg->Gly],none {F36H2.2},{haw8927} 396 CB6841_redo I 9276110 1 G C 74 1.00 63 26 0 4 4 @CCCC point 0 nongenic,nongenic -2321 upstream,2571 into {F14B4.2a.1},{F14B4.2b} 398 CB6841_redo I 9346153 1 A C 222 1.00 63 62 0 9 9 @cccccCcCC point 0 nongenic,nongenic -3665 upstream,1439 into {C12C8.3a,C12C8.3b},{M04C9.2} 399 CB6841_redo I 9346156 1 T C 212 1.00 63 62 0 9 9 @cccccCcCC point 0 nongenic,nongenic -3668 upstream,1442 into {C12C8.3a,C12C8.3b},{M04C9.2} 400 CB6841_redo I 9357394 1 A G 255 1.00 63 62 0 19 19 @gggggggggGggGGgggGg point 0 nongenic,nongenic -1671 upstream,-323 upstream {M04C9.5a},{M04C9.4} 403 CB6841_redo I 9384410 1 C G 15 1.00 63 0 0 4 4 @aGGG point 0 nongenic,nongenic 5216 into,5899 into {F16A11.3a,F16A11.3b,F16A11.3c},{F16A11.3d} 404 CB6841_redo I 9457731 1 G A 255 1.00 63 62 0 18 18 @aaAAaAAaAaAAAAAAaA point 0 SNP none {haw9060} 405 CB6841_redo I 9573999 1 T C 255 1.00 63 62 0 26 26 @CccCccCcCCCCccCcccccccCccC point 0 nongenic,nongenic,nongenic,nongenic,nongenic -5777 upstream,162 into,180 into,370 into,794 downstream {C36F7.4d},{C36F7.4a.1},{C36F7.4a.2},{C36F7.4b,C36F7.4c},{C36F7.5} 407 CB6841_redo I 9699160 1 T C 255 1.00 63 62 0 26 26 @CCccccCcCCCCCccCcCCcccCccC point 0 missense,SNP AAT->AGT[Asn->Ser],none {C04F12.8},{haw9282} 409 CB6841_redo I 9737906 1 C A 255 1.00 63 62 0 18 18 @aAaAAAaaaAAAaAAAaa point 0 SNP none {haw9323} 414 CB6841_redo I 9830825 1 C T 255 1.00 63 62 0 30 30 @TTTttTtTTTTTtTtTTTttTttTTTTTTT point 0 nongenic,nongenic -572 upstream,-8762 upstream {Y67A6A.1},{Y67A6A.2a,Y67A6A.2b.1,Y67A6A.2b.2} 415 CB6841_redo I 9940580 1 A T 255 1.00 63 62 0 18 18 @TTTTTTTTttTtTTtTtt point 0 SNP none {haw9585} 416 CB6841_redo I 9997302 1 C T 255 1.00 63 62 0 27 27 @ttTTTtTTTTTtTTTttTTtTtTttTT point 0 nongenic,nongenic -17422 upstream,2583 into {C03C11.1},{T23D8.8} 417 CB6841_redo I 10109254 1 T A 255 1.00 63 62 0 37 37 @aaAaAAAaaaAAaaAAaAAaaAAAaAAaAaAaAAAaa point 0 SNP none {haw9645} 5418 CB6841_redo I 10113279 0 X X -1000 -999.99 -1000 -1000 3 2 5 @...tTTt indel 0 inframe none {Y106G6D.3} 430 CB6841_redo I 10188886 1 T C 231 1.44 63 62 0 16 16 @CCCCcccCcCcCcccC point 0 silent AAA->AAG[Lys->Lys] {C25A1.10a,C25A1.10b} 434 CB6841_redo I 10205458 1 A C 96 1.00 31 10 0 7 7 @CCcCcCC point 0 nongenic -5028 upstream {Y106G6E.1} 440 CB6841_redo I 10229805 1 A T 19 1.00 63 62 2 4 6 @ttTT,, point 0 nongenic,nongenic,nongenic,nongenic -18472 upstream,-2806 upstream,1399 into,1401 into {ZC247.3},{Y106G6E.5.1},{Y106G6E.6.2},{Y106G6E.6.1} 442 CB6841_redo I 10243053 1 G A 16 1.00 63 34 2 3 5 @..aAa point 0 nongenic,nongenic -11847 upstream,-5224 upstream {Y106G6E.6.1},{ZC247.3} 447 CB6841_redo I 10270191 1 A C 3 6.81 0 0 17 37 54 @cCC,.cCCcccCCCcCccccC..Ccc,CccCCc.C,CC,C..CC,CCC.,,.,. point 0 missense TTC->GTC[Phe->Val] {ZC247.1} 465 CB6841_redo I 10436460 1 T C 18 1.00 63 6 1 3 4 @CCc. point 0 nongenic,nongenic,nongenic,nongenic -593 upstream,-647 upstream,207 into,442 downstream {Y106G6H.2a.1},{Y106G6H.2a.2},{Y106G6H.3},{Y106G6H.4} 466 CB6841_redo I 10436461 1 C A 9 1.00 63 6 2 2 4 @Aa.. point 0 nongenic,nongenic,nongenic,nongenic -594 upstream,-648 upstream,208 into,441 downstream {Y106G6H.2a.1},{Y106G6H.2a.2},{Y106G6H.3},{Y106G6H.4} 469 CB6841_redo I 10489709 1 T G 32 1.00 63 54 2 4 6 @.,ggGg point 0 nongenic,nongenic -11879 upstream,728 downstream {F37D6.6},{F37D6.4} 470 CB6841_redo I 10489711 1 G C 55 1.00 63 32 2 6 8 @.,ccCccC point 0 nongenic,nongenic -11877 upstream,730 downstream {F37D6.6},{F37D6.4} 471 CB6841_redo I 10595968 1 T C 255 1.00 63 62 0 33 33 @cccCCccccccCCccCCcCcCCcccccCcCCCc point 0 nongenic,nongenic -2730 upstream,1506 into {T22A3.5},{T22A3.6} 473 CB6841_redo I 10946879 1 T A 3 7.00 0 2 11 52 63 @aaA,,AAAAAA,,AAAAA.,AAAAAAAAA.AAAAAAAAAAaa,AAAAAAaA,AaAAAA,aaA, point 0 SNP none {uCE1-1097} 493 CB6841_redo I 10978887 1 A G 255 1.00 63 62 0 19 19 @gGGgGGGGGGgggGGggGG point 0 silent,SNP TCA->TCG[Ser->Ser],none {Y52B11A.3a,Y52B11A.3b},{haw9930} 494 CB6841_redo I 11001775 1 C A 255 1.00 63 62 0 13 13 @AAaaaAaAAaAAA point 0 nongenic,nongenic -13703 upstream,2502 into {Y52B11A.5},{Y52B11A.4} 496 CB6841_redo I 11145688 1 A G 62 1.00 63 36 1 3 4 @Ggg, point 0 silent TAA->TGA[stop->stop] {ZK39.9} 498 CB6841_redo I 11220200 1 C A 209 1.00 63 62 0 11 11 @aAAAAaAAAAA point 0 SNP none {haw10216} 161886 CB6841_redo I 11306894 70 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 4046 to 4116 bp into {H25P06.4} 5428 CB6841_redo I 11505539 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @.,,,,Aa indel 0 nongenic,nongenic,nongenic -1582 downstream,-4518 upstream,-5893 upstream {F32B4.8},{F32B4.1},{K08C9.6} 524 CB6841_redo I 11505540 1 T C 52 1.19 63 12 2 5 7 @cCCCC,. point 0 nongenic,nongenic,nongenic -4516 upstream,-5894 upstream,1581 into {F32B4.1},{K08C9.6},{F32B4.8} 525 CB6841_redo I 11505541 1 C G 13 1.50 63 52 3 4 7 @GGGG,., point 0 nongenic,nongenic,nongenic -4515 upstream,-5895 upstream,1580 into {F32B4.1},{K08C9.6},{F32B4.8} 527 CB6841_redo I 11522478 1 T G 46 1.00 63 62 3 5 8 @Ggggg.,. point 0 nongenic,nongenic,nongenic,nongenic -1826 upstream,-253 upstream,4075 into,656 into {F32B4.5},{F32B4.4a},{F32B4.4b.1},{F32B4.4b.2} 161887 CB6841_redo I 11590785 6513 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered 1507 bp upstream to codon 160 (31 % of 515 codons) {C17D12.2} 533 CB6841_redo I 11603465 1 A G 221 1.00 63 62 0 11 11 @GGgGGGGgGGG point 0 SNP none {haw10691} 534 CB6841_redo I 11606261 1 A T 255 1.00 63 62 0 21 21 @TttttTTTTttTTtTttTTtT point 0 SNP none {haw10701} 535 CB6841_redo I 11628456 1 A G 255 1.44 63 62 0 26 26 @GgggGGGGgGggGgGGGgGggGGggG point 0 nongenic -1174 upstream {W04G5.3} 536 CB6841_redo I 11646124 1 G C 3 1.38 63 24 3 5 8 @C,CCCC.. point 0 nongenic,nongenic -3847 upstream,713 downstream {W04G5.8},{W04G5.9} 539 CB6841_redo I 11659795 1 T C 19 3.50 9 6 0 4 4 @cccC point 0 nongenic -16135 upstream {F11A6.1a.2} 540 CB6841_redo I 11713508 1 C T 162 2.19 63 62 5 12 17 @TttttTtTtTtT,,,,, point 0 SNP none {haw10896} 545 CB6841_redo I 11883806 1 G C 255 5.25 63 62 0 25 25 @CCcccCcccCccCCCcccccccCCc point 0 nongenic,nongenic,nongenic -1215 upstream,-15710 upstream,3453 into {Y47H9C.5b},{Y47H9C.4a,Y47H9C.4b,Y47H9C.4c},{Y47H9C.5a} 546 CB6841_redo I 11905377 1 T C 255 1.00 63 62 0 21 21 @CcCCcCCCCCCCCCCCcCCcc point 0 SNP none {haw11247} 547 CB6841_redo I 11975955 1 A T 172 2.50 63 62 0 9 9 @Ttttttttt point 0 nongenic,nongenic -3474 upstream,-4167 upstream {Y53C10A.4},{Y53C10A.15} 548 CB6841_redo I 11975961 1 C A 153 2.25 63 62 0 10 10 @aaaaaaaaaa point 0 nongenic,nongenic -3468 upstream,-4173 upstream {Y53C10A.4},{Y53C10A.15} 549 CB6841_redo I 11988102 1 C T 255 1.00 63 62 0 28 28 @TTtttTttTTtTttTttTttttttTttT point 0 SNP none {haw11443} 550 CB6841_redo I 12093640 1 T A 82 2.31 50 62 4 6 10 @,,,AAAAA,A point 0 nongenic,nongenic -3680 upstream,831 into {Y47H10A.3},{Y47H10A.4} 551 CB6841_redo I 12108204 1 C T 94 1.00 63 62 0 4 4 @tTTt point 0 nongenic,nongenic -2236 upstream,245 into {M01G12.12},{M01G12.14} 553 CB6841_redo I 12133230 1 T G 3 2.00 0 2 12 18 30 @.G.GGGG.G.GG.GG..GG.G.GGGG.a.. point 0 nongenic 400 into {M01G12.2} 558 CB6841_redo I 12479794 1 G T 65 5.31 63 34 0 4 4 @TTTt point 0 nongenic,nongenic -1216 upstream,-4375 upstream {T27F6.2},{T27F6.4} 559 CB6841_redo I 12479795 1 G T 65 5.31 63 34 0 4 4 @TTTt point 0 nongenic,nongenic -1217 upstream,-4374 upstream {T27F6.2},{T27F6.4} 560 CB6841_redo I 12564714 1 T A 255 1.00 63 62 0 22 22 @aAAAAaAAAaaAAAAaaAaAAa point 0 nongenic,nongenic 204 into,514 downstream {C49G9.1},{C49G9.2} 561 CB6841_redo I 12676428 1 G T 50 1.00 63 28 2 2 4 @,T.T point 0 nongenic -2771 upstream {T26E3.2} 562 CB6841_redo I 12738706 1 A C 21 1.00 63 62 3 4 7 @...CCCC point 0 SNP none {uCE1-1372} 563 CB6841_redo I 12738711 1 A G 39 1.00 63 62 3 5 8 @...GGGGG point 0 SNP none {uCE1-1373} 566 CB6841_redo I 12846570 1 G C 3 1.00 63 0 1 4 5 @CCCC, point 0 nongenic 2259 into {Y18D10A.8} 569 CB6841_redo I 12846579 1 A C 3 1.00 63 0 1 4 5 @CCg.c point 0 nongenic 2268 into {Y18D10A.8} 570 CB6841_redo I 12846580 1 G C 3 1.00 63 0 1 3 4 @Cc.c point 0 nongenic 2269 into {Y18D10A.8} 571 CB6841_redo I 12862392 1 T A 255 1.00 63 62 0 21 21 @aaaaaaAaaAaaaAaaaaAaa point 0 SNP none {haw13170} 573 CB6841_redo I 12871730 1 T C 255 1.00 63 62 0 27 27 @ccCCcccCCCcccCcCccccCCccCcc point 0 nongenic,nongenic -2184 upstream,-6853 upstream {Y18D10A.23},{Y18D10A.13} 574 CB6841_redo I 12871733 1 T C 255 1.00 63 62 0 29 29 @ccCCcccCCCcccCcCccccCCccCccCc point 0 SNP none {uCE1-1387} 577 CB6841_redo I 13015757 1 T C 254 1.00 63 62 0 12 12 @CCcCCcCcCCcC point 0 nongenic,nongenic,nongenic,nongenic -17855 upstream,3550 into,4308 into,7524 into {W05B5.4},{ZK256.1b},{ZK256.1c},{ZK256.1a} 578 CB6841_redo I 13015767 1 T C 217 1.00 63 62 0 11 11 @CcCCcCCCCcc point 0 nongenic,nongenic,nongenic,nongenic -17845 upstream,3560 into,4318 into,7514 into {W05B5.4},{ZK256.1b},{ZK256.1c},{ZK256.1a} 579 CB6841_redo I 13015797 1 T C 255 1.06 63 62 0 14 14 @CCCcccCcCcccCC point 0 nongenic,nongenic,nongenic,nongenic -17815 upstream,3590 into,4348 into,7484 into {W05B5.4},{ZK256.1b},{ZK256.1c},{ZK256.1a} 582 CB6841_redo I 13118108 1 T C 255 8.12 63 62 0 25 25 @cCcCCCCccCCccCCcccCCCcccc point 0 nongenic -2971 upstream {C17H1.9} 583 CB6841_redo I 13154593 1 G A 14 2.00 0 10 0 4 4 @AaAA point 0 nongenic,nongenic 666 downstream,917 downstream {F22G12.4},{F22G12.3} 584 CB6841_redo I 13168446 1 C G 255 1.00 63 62 0 31 31 @GGggGggGGGggGgGgGgGgGgGgggGGGGG point 0 missense,SNP CAC->GAC[His->Asp],none {F22G12.5},{haw13520} 590 CB6841_redo I 13419807 1 T A 198 1.00 63 62 0 8 8 @aaAAaAaa point 0 SNP none {haw14087} 591 CB6841_redo I 13482732 1 G T 71 2.19 63 62 0 5 5 @tTTtt point 0 nongenic,nongenic,nongenic -6815 upstream,-8558 upstream,4661 into {Y48G10A.1.1},{Y48G10A.3},{Y48G10A.2} 592 CB6841_redo I 13491128 1 A T 60 1.00 63 30 0 4 4 @CTTt point 0 three_prime_UTR none {Y48G10A.1.1} 593 CB6841_redo I 13491129 1 A T 72 1.00 63 30 0 4 4 @TTTt point 0 three_prime_UTR none {Y48G10A.1.1} 594 CB6841_redo I 13499009 1 C T 255 1.00 63 62 3 33 36 @,T,TTTTttT,tTtTTTttTttttttttTttTtttt point 0 nongenic,nongenic -4023 upstream,-5722 upstream {Y87G2A.14},{Y87G2A.17} 598 CB6841_redo I 13539024 1 A T 203 1.69 63 62 0 10 10 @TTTtTTtTTT point 0 nongenic 2063 into {Y87G2A.3} 599 CB6841_redo I 13545463 1 T A 3 1.69 29 16 2 2 4 @aa.. point 0 nongenic -286 upstream {Y87G2A.4} 600 CB6841_redo I 13560104 1 G A 255 1.00 63 62 0 26 26 @AaaAAAaaaAaAaAaaaaAAaaAAaA point 0 nongenic,nongenic -411 upstream,-754 upstream {Y87G2A.16},{Y87G2A.5} 605 CB6841_redo I 13584208 1 A C 68 3.81 46 44 0 5 5 @CcCCc point 0 nongenic 1077 into {Y87G2A.9} 608 CB6841_redo I 13642685 1 G T 255 1.00 63 62 0 17 17 @tttttTtttTtttTTTT point 0 SNP none {haw14305} 609 CB6841_redo I 13663386 1 G A 255 1.00 63 62 0 29 29 @AaaAAAAAaAAaAAaaAaaaaAAaAaaaA point 0 nongenic -85 upstream {W04A4.5} 611 CB6841_redo I 13832461 1 G C 209 2.12 63 62 0 11 11 @ccccCcCCCcc point 0 nongenic -327 upstream {W09G3.1a,W09G3.1b} 612 CB6841_redo I 13860804 1 C T 149 1.00 63 62 1 10 11 @ttGttttttt, point 0 SNP none {haw14642} 613 CB6841_redo I 13860835 1 G C 255 1.00 63 62 0 14 14 @ccCCCCccccCcCC point 0 SNP none {haw14643} 614 CB6841_redo I 13985036 1 A G 255 1.00 63 62 0 23 23 @ggGGGGgGGgGgGGgggGGgggg point 0 missense,SNP AAA->GAA[Lys->Glu],none {Y71A12B.17},{haw14760} 615 CB6841_redo I 14002230 1 T G 86 6.00 63 62 10 49 59 @GggGgGgGggg,AGGG.GGG.GG.,GGGGGGGGG.GGGGGGG,G,G,GGG,GGGGGGGG point 0 nongenic -2215 upstream {Y71A12B.12a.1} 616 CB6841_redo I 14002373 1 A G 8 9.25 63 62 62 167 229 @Gggg..G.g.gGggggggggggG,,G.gtgggggg,G,..g.gg.,G,ggg.ggg.gggGGggg.ggggggggggggg.g.ggggggggGGGggggg.g point 0 nongenic -2072 upstream {Y71A12B.12a.1} 617 CB6841_redo I 14002390 1 T G 135 4.50 63 62 34 35 69 @,G....g.....G...G,.....g......A......A...GGGGggGGGgGgggGgGggGGgGGGggG point 0 SNP none {haw14764} 624 CB6841_redo I 14049137 1 T C 255 1.00 63 62 0 23 23 @cCCCCcCCccCccccCCcCCCcC point 0 SNP none {uCE1-1488} 625 CB6841_redo I 14063027 1 C T 255 1.00 63 62 0 23 23 @TttttTTtTTtTtttTTTttttT point 0 nongenic,nongenic,nongenic,nongenic -12795 upstream,-902 upstream,152 into,292 into {F47G4.3},{F47G4.5},{F47G4.4.2},{F47G4.4.1} 626 CB6841_redo I 14097922 1 T C 255 1.00 63 62 0 20 20 @CcccCcCCCccCCcCCcccC point 0 nongenic,nongenic,nongenic -1588 upstream,-3341 upstream,381 into {Y63D3A.2},{Y63D3A.5.1},{Y63D3A.4} 627 CB6841_redo I 14121557 1 T C 45 1.00 63 28 3 5 8 @ccCcc.,. point 0 nongenic 2813 into {K03D10.3} 632 CB6841_redo I 14188643 1 G A 255 1.00 63 62 0 34 34 @aaAAaAAaaAAaAaAaAAaaaaaAaaAaaAAaAa point 0 nongenic,nongenic,nongenic -3018 upstream,240 into,3014 into {ZK849.1},{ZK849.2a,ZK849.2b},{ZK849.2c} 633 CB6841_redo I 14231174 1 G C 3 1.00 63 0 3 5 8 @,CCCCC,. point 0 nongenic,nongenic,nongenic,nongenic -171 upstream,109 into,157 into,482 downstream {C49A1.4b.1},{C49A1.4b.2},{C49A1.4a},{C49A1.9} 635 CB6841_redo I 14231179 1 C G 3 1.00 63 0 1 4 5 @GGGG. point 0 nongenic,nongenic,nongenic,nongenic -176 upstream,104 into,152 into,477 downstream {C49A1.4b.1},{C49A1.4b.2},{C49A1.4a},{C49A1.9} 636 CB6841_redo I 14244891 1 G C 138 1.00 63 62 1 10 11 @,CCcccccccc point 0 nongenic,nongenic -1323 upstream,-471 upstream {C49A1.6},{C49A1.10} 642 CB6841_redo I 14319060 1 A T 255 1.00 63 62 1 24 25 @tTTTtTTtttTtTTtTTtTTt,TTt point 0 nongenic -3163 upstream {F49B2.5} 649 CB6841_redo I 14347419 1 C A 255 1.25 63 62 0 12 12 @aaAAAaAAaAaa point 0 nongenic,nongenic -3626 upstream,81 downstream {Y105E8A.1},{Y105E8A.2} 650 CB6841_redo I 14362092 1 G T 255 1.00 63 62 0 17 17 @tTTTtTTTtttttTtTt point 0 SNP none {haw15184} 651 CB6841_redo I 14363822 1 A T 151 6.12 63 62 0 10 10 @tttttTTTTT point 0 nongenic,nongenic -5509 upstream,3757 into {Y105E8A.2},{Y105E8A.3} 652 CB6841_redo I 14363832 1 T C 94 3.88 63 62 0 8 8 @cCCCCCCC point 0 nongenic,nongenic -5519 upstream,3747 into {Y105E8A.2},{Y105E8A.3} 161888 CB6841_redo I 14391807 93 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1487 to 1580 bp into {Y105E8A.7a,Y105E8A.7b} 657 CB6841_redo I 14431046 1 C A 182 1.00 63 62 0 10 10 @AAAAaaaAAa point 0 SNP none {haw15294} 661 CB6841_redo I 14480479 1 G A 255 1.00 63 62 0 24 24 @aaAAaAaAAaAaAAAAaAaaAaaA point 0 SNP none {haw15337} 662 CB6841_redo I 14518026 1 C G 249 1.00 63 62 0 12 12 @gGGGGggGGGGG point 0 SNP none {haw15420} 663 CB6841_redo I 14547131 1 C A 54 1.00 63 56 1 3 4 @aaa. point 0 nongenic 509 downstream {Y105E8A.26a,Y105E8A.26b} 664 CB6841_redo I 14574065 1 A G 20 2.25 0 18 0 27 27 @ggggGgggggggggGgggGggGGggGg point 0 nongenic,nongenic,nongenic -8233 upstream,4561 into,6747 into {Y105E8A.23a,Y105E8A.23b},{Y105E8A.24b},{Y105E8A.24a} 665 CB6841_redo I 14579727 1 C T 255 1.00 63 62 0 26 26 @tTTttttTTTttTTtTTTtTTTttTt point 0 nongenic,nongenic -13895 upstream,1240 into {Y105E8A.23a,Y105E8A.23b},{Y105E8A.24a,Y105E8A.24b} 666 CB6841_redo I 14586339 1 A C 255 1.00 63 62 0 25 25 @CCCccCCCCcccCccccccccccCc point 0 SNP none {haw15496} 667 CB6841_redo I 14610358 1 C T 126 2.19 63 62 0 6 6 @tttttt point 0 nongenic -6231 upstream {Y105E8A.25} 672 CB6841_redo I 14610447 1 A G 169 1.25 63 62 0 11 11 @GGGGGGGGGGG point 0 nongenic -6320 upstream {Y105E8A.25} 676 CB6841_redo I 14632390 1 G C 13 1.19 63 0 0 5 5 @CCCCC point 0 nongenic -1148 upstream {Y105E8B.1f} 679 CB6841_redo I 14632394 1 G C 12 1.00 63 2 0 4 4 @CCCC point 0 nongenic -1152 upstream {Y105E8B.1f} 685 CB6841_redo I 14675915 1 A T 255 1.00 63 62 0 28 28 @TtTTTTTTtTtTTTTTTtTTttTTtTTT point 0 SNP none {haw15602} 5435 CB6841_redo I 14685074 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @,,,gg indel 0 nongenic -2523 upstream {Y105E8B.9} 713 CB6841_redo I 14758817 1 T C 255 1.00 63 62 0 16 16 @CCccccCcccCCcCCC point 0 nongenic,nongenic,nongenic -1089 upstream,397 downstream,42 downstream {F39B2.6.1},{F39B2.10.2},{F39B2.10.1} 716 CB6841_redo I 14877163 1 A T 255 1.00 63 62 0 20 20 @tttTTTTttTTtTTTTtTTT point 0 nongenic,nongenic,nongenic,nongenic -32063 upstream,1337 into,1413 into,781 into {ZK270.1},{ZK270.2a.2},{ZK270.2a.1},{ZK270.2a.3,ZK270.2b,ZK270.2d,ZK270.2e} 717 CB6841_redo I 14918627 1 A C 245 1.00 63 62 0 12 12 @CCCCcCccCcCC point 0 SNP none {haw15977} 719 CB6841_redo I 15040328 1 T C 255 1.00 63 62 0 31 31 @CccCCCcccCccCcCcCCCcCCCCCcCcccc point 0 silent,SNP ATT->ATC[Ile->Ile],none {F31C3.2a,F31C3.2b},{haw16048} 720 CB6841_redo I 15067997 1 A G 4 1.81 34 12 1 23 24 @gGGGGtg.gGggggggggggGGgg point 0 ncRNA,SNP none,none {F31C3.9},{snp_F31C3[4]} 727 CB6841_redo I 15071724 1 A G 17 3.38 0 2 0 16 16 @GGGGGGGGGGGgGGGG point 0 nongenic -12733 upstream {F31C3.6a} 733 CB6841_redo II 232985 1 A G 14 1.00 63 58 1 3 4 @Ggg, point 0 nongenic,nongenic,nongenic -244 upstream,-246 upstream,408 downstream {Y43H11AL.1.1},{Y43H11AL.1.3},{Y43H11AL.2} 735 CB6841_redo II 498648 1 C T 255 1.00 63 62 0 16 16 @TTtttttTTTTttttT point 0 missense TCT->TTT[Ser->Phe] {W07E6.3} 161890 CB6841_redo II 503966 629 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1419 to 2048 bp into {T27A1.1} 739 CB6841_redo II 542601 1 C T 255 1.00 63 62 0 26 26 @ttTTTttTtttTTttTtTTTttTttt point 0 nongenic -4101 upstream {C09E8.3.1} 740 CB6841_redo II 646915 1 C T 255 1.00 63 62 0 31 31 @TtTttTtttttTTTtttttTtTtttttTTtt point 0 nongenic,nongenic,nongenic -5084 upstream,-7420 upstream,3459 into {K07E8.5},{K07E8.6},{K07E8.7} 773 CB6841_redo II 777128 1 G A 255 2.44 63 62 0 30 30 @aaAaaAaaAAaaAaaAaAaaaaaaAaaaaa point 0 nongenic 406 downstream {Y39F10A.1} 774 CB6841_redo II 792333 1 C G 3 1.00 63 2 4 5 9 @,G,GGG,G. point 0 nongenic,nongenic -344 upstream,-7755 upstream {F46F5.1},{F46F5.14} 775 CB6841_redo II 792335 1 T C 3 1.00 63 2 0 9 9 @CCCCGCCCg point 0 nongenic,nongenic -346 upstream,-7753 upstream {F46F5.1},{F46F5.14} 5442 CB6841_redo II 792340 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @,,,,,cc. indel 0 nongenic,nongenic -351 upstream,-7749 upstream {F46F5.1},{F46F5.14} 784 CB6841_redo II 857184 1 C T 3 9.94 0 24 4 7 11 @,,tt,ttt,tt point 0 nongenic -967 upstream {Y46B2A.2} 785 CB6841_redo II 935804 1 A G 255 1.00 63 62 0 35 35 @ggggggGGggGGgGGggGGgGGGGGggGggGgggg point 0 silent AAA->AAG[Lys->Lys] {R07C3.4} 786 CB6841_redo II 959061 1 A T 255 1.00 63 62 0 28 28 @ttTttTtTTTtTtTtTTTTtTTTTTTTT point 0 nongenic,nongenic -1472 upstream,95 into {C32B5.7},{C32B5.16} 790 CB6841_redo II 1043004 1 C T 255 1.00 63 62 0 33 33 @TttTtTTTTtTttTTTTTTtttTTTTTtttttt point 0 missense GGT->AGT[Gly->Ser] {M01D1.10} 793 CB6841_redo II 1214973 1 T A 43 1.00 63 62 3 6 9 @...AaaaAa point 0 nongenic,nongenic -9383 upstream,15814 into {F53A10.2c},{F53A10.2a} 796 CB6841_redo II 1221572 1 G A 31 1.00 63 2 3 5 8 @,.,aaAaA point 0 SNP none {haw17694} 799 CB6841_redo II 1333323 1 C G 254 1.44 63 62 0 11 11 @ggggggGGgGG point 0 nongenic,nongenic -3747 upstream,6323 into {F56D12.4b,F56D12.4c.2},{F56D12.4a} 800 CB6841_redo II 1388553 1 G A 34 1.00 63 4 1 3 4 @Aat, point 0 nongenic,nongenic -3166 upstream,1660 into {F54D12.7},{F54D12.3} 801 CB6841_redo II 1388554 1 T G 5 1.00 63 34 2 2 4 @Gg., point 0 nongenic,nongenic -3167 upstream,1661 into {F54D12.7},{F54D12.3} 802 CB6841_redo II 1388899 1 G A 255 1.00 63 62 0 22 22 @aaaAaaaAAaaaAAaAaaaAaa point 0 nongenic,nongenic -3512 upstream,2006 into {F54D12.7},{F54D12.3} 803 CB6841_redo II 1392498 1 T C 255 1.00 63 62 0 17 17 @CCcCccCcCCcCccCcC point 0 nongenic,nongenic 924 downstream,995 downstream {F54D12.3},{F54D12.11} 811 CB6841_redo II 1462193 1 G A 193 1.81 63 62 11 21 32 @a..A.AAA..A...aaaAa.A..AaaAaaAAa point 0 nongenic -879 upstream {Y51H7C.15} 820 CB6841_redo II 1590685 1 G A 255 1.50 63 62 0 21 21 @AAaAaaaaAaAaAaAaAaAAA point 0 nongenic -734 upstream {T07H3.7} 822 CB6841_redo II 1605235 1 C T 8 3.44 63 62 25 40 65 @,.t..,t,.T..t....ttttt,,ttttttttttTt...t.TTtttt.ttt..ttt..tt.TttT point 0 nongenic,nongenic 566 into,620 downstream {C08E3.3},{T07H3.1} 823 CB6841_redo II 1637578 1 C G 189 1.00 63 62 0 7 7 @GgggGGG point 0 nongenic 884 into {ZC204.4a,ZC204.4b} 824 CB6841_redo II 1637579 1 G C 187 1.00 63 62 0 7 7 @CcccCCC point 0 nongenic 885 into {ZC204.4a,ZC204.4b} 829 CB6841_redo II 1666804 1 C G 111 1.00 63 62 12 20 32 @G,g.gGGG.GGGggggGG,,G.,gg,G..G,, point 0 nongenic,nongenic 477 into,720 downstream {ZC204.1},{ZC204.15} 830 CB6841_redo II 1804984 1 T A 47 9.00 63 42 0 8 8 @Aaaaaaaa point 0 nongenic 825 into {C08F1.8} 833 CB6841_redo II 1850708 1 T C 255 1.00 63 62 0 26 26 @CcccCCCcCCcCccccCcCCCcCCcC point 0 nongenic,nongenic -307 upstream,-537 upstream {C52E2.7},{C52E2.3} 835 CB6841_redo II 1862310 1 A C 14 2.00 0 0 0 4 4 @CCcc point 0 nongenic,nongenic -325 upstream,902 downstream {C16C4.6},{C16C4.7} 838 CB6841_redo II 2001658 1 A C 236 2.06 63 62 0 18 18 @CCccCCCccCCCCCccCc point 0 nongenic,nongenic -1719 upstream,-836 upstream {F59H6.5},{C40D2.4} 839 CB6841_redo II 2023350 1 G A 126 3.25 63 62 1 26 27 @aAAaaAaAAaAaaAaAaaa,aAAAAaa point 0 nongenic,nongenic -46 upstream,907 downstream {F59H6.7},{F59H6.2} 843 CB6841_redo II 2079814 1 G A 255 1.00 63 62 0 21 21 @TAAaAAaAAAaAAaaAaAaAA point 0 SNP none {haw19273} 851 CB6841_redo II 2177647 1 T G 255 1.00 63 62 0 20 20 @GGGGGGggGggGGggggGGG point 0 nongenic,nongenic,nongenic -111 upstream,-2356 upstream,755 into {C33C12.3b},{C33C12.7},{C33C12.3a} 852 CB6841_redo II 2190806 1 T C 255 1.00 63 62 0 24 24 @cCccccCcCCcccccCCcCCcCcc point 0 nongenic -1347 upstream {C33C12.9} 853 CB6841_redo II 2209565 1 A T 255 1.00 63 62 0 28 28 @ttttTtTTtttttTTtttTTtTTTTttt point 0 nongenic,nongenic -5434 upstream,1453 into {Y59C2A.2},{Y59C2A.1} 854 CB6841_redo II 2209701 1 G A 255 1.00 63 62 0 21 21 @AAAAAaaAaaaaaAaAaAAaA point 0 missense GGA->GAA[Gly->Glu] {Y59C2A.1} 861 CB6841_redo II 2256186 1 G A 255 1.19 63 62 0 23 23 @AaAAaAaAaaaAaaAaAAaAAaA point 0 nongenic -120 upstream {K09F6.3} 862 CB6841_redo II 2389996 1 G A 255 1.00 63 62 0 30 30 @aAAaaAAaAAAAAaaaaaAaaaaaaaaaaA point 0 nongenic,nongenic -3285 upstream,414 into {F16G10.9},{F16G10.10} 864 CB6841_redo II 2472169 1 C T 175 1.00 63 62 0 8 8 @tTtttttt point 0 SNP none {haw20431} 865 CB6841_redo II 2549027 1 G A 255 1.00 63 62 0 33 33 @AaaAaaaaaaAAaaaAAaaAaAAAAAAAAaAAa point 0 missense GGC->GAC[Gly->Asp] {K02F6.3} 866 CB6841_redo II 2564358 1 C G 42 1.00 63 18 1 5 6 @gGGGG, point 0 nongenic,nongenic -679 upstream,-917 upstream {K02F6.9},{F09D1.1} 867 CB6841_redo II 2570403 1 A G 17 1.19 63 62 15 25 40 @.,.,,,.GGG.GGgG.,,,GGgggG,,GGGgGGGG,GTGG point 0 nongenic,nongenic -6724 upstream,5128 into {K02F6.9},{F09D1.1} 868 CB6841_redo II 2571026 1 T A 12 1.31 63 14 2 5 7 @aaaaa,, point 0 nongenic,nongenic -7347 upstream,4879 into {K02F6.9},{F09D1.1} 869 CB6841_redo II 2576882 1 G A 255 1.00 63 62 1 15 16 @AAAaaAAaaaaaAa,a point 0 nongenic 977 downstream {F09D1.1} 874 CB6841_redo II 2642042 1 G A 5 1.00 63 6 2 2 4 @aA.. point 0 nongenic,nongenic 143 downstream,42 into {F22E5.8},{F22E5.7} 875 CB6841_redo II 2642044 1 C G 6 1.00 63 4 2 2 4 @gG.. point 0 nongenic,nongenic 145 downstream,44 into {F22E5.8},{F22E5.7} 876 CB6841_redo II 2669850 1 A T 255 1.31 63 62 0 23 23 @TTttttTttttTttttTtTTTTT point 0 nongenic 702 downstream {F22E5.16} 880 CB6841_redo II 2678739 1 C A 104 1.00 63 18 1 7 8 @AaaaAAA. point 0 missense CCC->ACC[Pro->Thr] {F22E5.17} 881 CB6841_redo II 2692711 1 T G 39 1.00 63 34 1 3 4 @GGG. point 0 nongenic,nongenic -2530 upstream,1601 into {F34D6.9},{F34D6.4} 882 CB6841_redo II 2703217 1 C T 255 1.00 63 62 0 24 24 @ttTttttTTtttttTTTtTtTtTt point 0 nongenic,nongenic -359 upstream,203 downstream {Y47G7B.3},{Y47G7B.1} 884 CB6841_redo II 2723817 1 G A 255 1.00 63 62 0 24 24 @aaaAaAaaAAAAaaAAAaaAAAAa point 0 nongenic,nongenic -6381 upstream,1725 into {T05A8.3},{T05A8.4} 885 CB6841_redo II 2785322 1 C T 255 1.00 63 62 0 18 18 @TttTtttTttTTTTtTTT point 0 nongenic,nongenic,nongenic -2158 upstream,1736 into,1760 into {F08D12.1},{F08D12.12.2},{F08D12.12.1} 886 CB6841_redo II 2799760 1 A T 255 1.00 63 62 0 19 19 @tTttttTTTtTttTttTTT point 0 SNP none {haw21113} 888 CB6841_redo II 2818720 1 C T 33 1.00 63 62 4 5 9 @tTTtt..,, point 0 nongenic,nongenic,nongenic -3176 upstream,403 into,713 downstream {K12H6.2},{K12H6.11},{K12H6.3} 889 CB6841_redo II 2826398 1 C T 255 1.00 63 62 0 33 33 @tTttttttttTttttTtttttTTttTTtTtTTT point 0 nongenic,nongenic -1730 upstream,200 into {K12H6.8},{K12H6.5} 896 CB6841_redo II 2881453 1 C T 255 1.00 63 62 0 16 16 @TTTtTTttTTtTtTtT point 0 nongenic,nongenic 2501 into,473 into {Y110A2AL.12a},{Y110A2AL.12b} 897 CB6841_redo II 2897370 1 A G 15 3.69 0 12 0 6 6 @gggggg point 0 nongenic,nongenic -2975 upstream,637 into {Y110A2AL.14.1},{Y110A2AM.3} 898 CB6841_redo II 2897560 1 A G 3 2.75 0 18 0 11 11 @TTGGgGGGGgG point 0 nongenic,nongenic -3165 upstream,827 into {Y110A2AL.14.1},{Y110A2AM.3} 899 CB6841_redo II 2897636 1 T A 4 4.25 0 20 3 6 9 @.,AaaA.aA point 0 nongenic,nongenic -3241 upstream,903 into {Y110A2AL.14.1},{Y110A2AM.3} 902 CB6841_redo II 2897879 1 A T 212 3.75 63 62 1 16 17 @TTt.TtTtTTttttttt point 0 SNP none {haw21398} 903 CB6841_redo II 2897887 1 T G 220 4.88 40 62 0 13 13 @GgGgGGggggggg point 0 nongenic,nongenic -3492 upstream,1154 into {Y110A2AL.14.1},{Y110A2AM.3} 906 CB6841_redo II 2898385 1 A G 12 0.00 0 12 0 4 4 @GGGG point 0 nongenic,nongenic -3990 upstream,1652 into {Y110A2AL.14.1},{Y110A2AM.3} 907 CB6841_redo II 2898386 1 T C 12 0.00 0 12 0 4 4 @CCCC point 0 nongenic,nongenic -3991 upstream,1653 into {Y110A2AL.14.1},{Y110A2AM.3} 908 CB6841_redo II 2898440 1 T A 5 4.06 0 22 5 7 12 @,aAaAAA,,a,, point 0 nongenic,nongenic -4045 upstream,1707 into {Y110A2AL.14.1},{Y110A2AM.3} 161892 CB6841_redo II 2900780 80 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 224 to 304 bp into {Y110A2AM.4} 917 CB6841_redo II 2925946 1 G C 15 1.00 63 26 3 5 8 @..,cCcCc point 0 missense CGC->CCC[Arg->Pro] {ZK355.2a.1,ZK355.2a.2,ZK355.2b} 918 CB6841_redo II 2966426 1 C T 255 1.00 63 62 0 33 33 @TttttTtTtttttTTTTTTTtttTtTttTtTtt point 0 nongenic -10207 upstream {K08A2.5a.3,K08A2.5c.2} 919 CB6841_redo II 2974233 1 T G 14 1.00 63 0 0 4 4 @GGGg point 0 nongenic -2400 upstream {K08A2.5a.3,K08A2.5c.2} 921 CB6841_redo II 2994704 1 C T 255 1.00 63 62 0 28 28 @TttTTTTTttTtttTTttTtttTTtTtT point 0 nongenic,nongenic -2311 upstream,434 downstream {K08A2.1.1},{K08A2.2} 922 CB6841_redo II 3010883 1 C T 255 1.06 63 62 0 27 27 @TTTTTtTtTTTttTTtTTtTtttTTtt point 0 nongenic 685 into {C41H7.8} 923 CB6841_redo II 3022010 1 C T 255 1.00 63 62 0 28 28 @tTTTTtTTTTtTTtTTttttTTtTtTtt point 0 premature_stop TGG->TGA[Trp->stop] {B0454.7} 924 CB6841_redo II 3033664 1 C T 255 1.00 63 62 0 28 28 @ttttTtTTTtttTtTtttttTtTttttt point 0 missense TCT->TTT[Ser->Phe] {B0454.6} 925 CB6841_redo II 3047220 1 C T 255 1.00 63 62 0 29 29 @ttTTTTttTttTtTTTTTTTTtTTttttt point 0 missense TCC->TTC[Ser->Phe] {B0454.10} 926 CB6841_redo II 3116533 1 C T 255 1.00 63 62 0 24 24 @TtttTtttTTtTTttttttttTtt point 0 missense ACT->ATT[Thr->Ile] {Y25C1A.1} 934 CB6841_redo II 3215711 1 C T 255 1.00 63 62 0 37 37 @TTTTtTttTtTtttTTtTTtTtttTtTTTTTtTTTtt point 0 nongenic,nongenic -364 upstream,295 downstream {ZC239.3},{ZC239.4} 945 CB6841_redo II 3244675 1 C T 189 1.00 63 62 0 9 9 @ttttTTttt point 0 nongenic,nongenic -523 upstream,407 downstream {C17F4.12},{C17F4.7} 946 CB6841_redo II 3278964 1 T A 255 1.00 63 62 0 20 20 @AaaAaAAaAAaAAAAaaaaa point 0 SNP none {haw22209} 947 CB6841_redo II 3299087 1 C T 255 1.00 63 62 0 27 27 @tttTTttttttttTTttttTTTtTTTT point 0 missense CCC->TCC[Pro->Ser] {F39E9.12} 948 CB6841_redo II 3430526 1 C T 255 1.00 63 62 0 22 22 @tttTtTtTttTTttTtTTTtTT point 0 silent GAC->GAT[Asp->Asp] {C16C8.18} 954 CB6841_redo II 3532191 1 G C 201 9.69 63 62 0 10 10 @cCCCCCCCCC point 0 nongenic,nongenic,nongenic -3680 upstream,404 downstream,692 downstream {W09G10.3},{W09G10.4a},{W09G10.4b} 956 CB6841_redo II 3650567 1 C A 255 1.00 63 62 0 21 21 @aaAaAAaaaaaAaAaAaaaaa point 0 nongenic -682 upstream {F19B10.11} 957 CB6841_redo II 3796556 1 C T 51 2.31 63 62 39 216 255 @..T,,T,tt,TT,,t..TTt.T.t,t.TTTT,TGTGtTTTTTGTT,TTT,GTGGTTGGGggTTGTTTTGTGG,GTGTGTTGgTTTGGTTTGGTG.T,GG point 0 silent ACC->ACT[Thr->Thr] {Y8A9A.2} 5456 CB6841_redo II 3796666 0 X X -1000 -999.99 -1000 -1000 9 -7 2 @,,,...ggg..agagGGGGg.g indel 0 inframe none {Y8A9A.2} 965 CB6841_redo II 3797053 1 A T 51 5.88 31 62 27 29 56 @t.,,,..,.,.t.tt..tt.TTTT.tttTt,tt.ttt.,t...tt.,.tt.t,ttt point 0 missense CAT->CTT[His->Leu] {Y8A9A.2} 967 CB6841_redo II 3797266 1 T A 4 5.00 26 14 12 13 25 @.aa,a,Aa,,.a.aA.a.,Aa.a.a point 0 missense CTG->CAG[Leu->Gln] {Y8A9A.2} 968 CB6841_redo II 3797353 1 A T 255 2.44 63 62 8 26 34 @,T....TTttTtTT,ttttTttTTT.T.tTTTTt point 0 missense CAT->CTT[His->Leu] {Y8A9A.2} 975 CB6841_redo II 3874195 1 G C 12 1.00 63 0 0 4 4 @cccc point 0 nongenic 662 into {C49D10.10} 1009 CB6841_redo II 3946674 1 A T 11 1.56 63 52 3 4 7 @TTTT.,. point 0 nongenic -2719 upstream {T20H12.1} 1011 CB6841_redo II 4142478 1 C G 188 1.00 63 62 0 8 8 @GGGgGgGG point 0 nongenic -331 upstream {F56D3.1.2} 1012 CB6841_redo II 4142481 1 G A 130 1.00 63 62 0 6 6 @aAaAAA point 0 nongenic -328 upstream {F56D3.1.2} 1013 CB6841_redo II 4142501 1 A T 242 1.00 63 62 0 10 10 @TttTTTtttT point 0 nongenic -308 upstream {F56D3.1.2} 1014 CB6841_redo II 4260994 1 T C 5 7.75 0 4 2 6 8 @cc,,cCCC point 0 nongenic,nongenic -15212 upstream,-2218 upstream {C01F1.4},{C16A11.8} 1015 CB6841_redo II 4273307 1 G C 16 1.00 63 62 1 3 4 @,CCC point 0 nongenic,nongenic -14531 upstream,-2899 upstream {C16A11.8},{C01F1.4} 1021 CB6841_redo II 4399212 1 G C 47 1.00 63 58 1 4 5 @C,ccc point 0 nongenic,nongenic -6642 upstream,5636 into {ZK430.5},{ZK430.8} 1022 CB6841_redo II 4468036 1 G T 255 1.00 63 62 0 22 22 @TTTTTtTttTTtTTTttTTttT point 0 SNP none {haw24704} 1023 CB6841_redo II 4468046 1 G T 255 1.00 63 62 0 23 23 @TttTTtTTTttTTttTTTTttTT point 0 nongenic,nongenic -114 upstream,159 downstream {W06B4.2},{W06B4.3} 1024 CB6841_redo II 4484308 1 T C 51 1.00 63 62 1 5 6 @ccCcC, point 0 nongenic -595 upstream {T05C1.2} 1025 CB6841_redo II 4492562 1 T A 121 1.00 63 2 0 4 4 @Aaaa point 0 nongenic,nongenic,nongenic,nongenic,nongenic -1707 upstream,-19636 upstream,1174 into,1409 into,810 into {T05C1.5},{B0304.3},{T05C1.4b},{T05C1.4a},{T05C1.4c} 1026 CB6841_redo II 4499374 1 G C 255 1.00 63 62 0 24 24 @CCCCccCCCcCCccccCccCcCCC point 0 SNP none {haw24761} 1027 CB6841_redo II 4642238 1 T A 6 8.62 0 2 1 7 8 @.aAaaAAa point 0 nongenic,nongenic -3908 upstream,-6843 upstream {F35D11.11a,F35D11.11b,F35D11.11c},{Y74E4A.1b} 1028 CB6841_redo II 4642240 1 C T 55 6.75 26 6 0 11 11 @tTttTTttttt point 0 nongenic,nongenic -3910 upstream,-6841 upstream {F35D11.11a,F35D11.11b,F35D11.11c},{Y74E4A.1b} 1050 CB6841_redo II 4754160 1 G A 40 1.00 63 56 2 3 5 @AAA.. point 0 missense,SNP GGA->GAA[Gly->Glu],none {C27D9.1},{uCE2-1589} 1060 CB6841_redo II 4929759 1 C A 255 1.44 63 62 0 23 23 @AaaAAaAAaAAaaaAaAaAAaAA point 0 SNP none {haw25053} 1061 CB6841_redo II 4964576 1 C A 255 1.00 63 62 0 19 19 @aaaAaaAAAAaaAaaaAaa point 0 SNP none {haw25061} 1062 CB6841_redo II 5028912 1 C G 20 1.00 63 2 2 4 6 @,,GGgG point 0 nongenic 1056 into {F59A6.1} 1070 CB6841_redo II 5185654 1 G C 255 1.00 63 62 0 33 33 @CccCCCCCCcCCCCCCCCCccCcccCCCCCccC point 0 missense,SNP CCT->CGT[Pro->Arg],none {C27D6.4c},{haw25156,uCE2-1607} 1071 CB6841_redo II 5191923 1 T G 14 1.00 63 62 2 3 5 @..gGG point 0 nongenic,nongenic -2389 upstream,-4369 upstream {C34F11.6},{C27D6.4b.1} 1074 CB6841_redo II 5231216 1 T G 66 1.00 63 26 0 4 4 @gggg point 0 nongenic,nongenic -185 upstream,736 downstream {EGAP2.1},{EGAP2.2} 1075 CB6841_redo II 5231227 1 T G 180 1.00 63 62 0 8 8 @ggggggGG point 0 nongenic,nongenic -174 upstream,747 downstream {EGAP2.1},{EGAP2.2} 1076 CB6841_redo II 5231250 1 A C 255 1.00 63 62 0 17 17 @ccccccCCcCCCcCCCC point 0 nongenic,nongenic -151 upstream,770 downstream {EGAP2.1},{EGAP2.2} 1082 CB6841_redo II 5322089 1 T A 255 1.00 63 62 0 22 22 @aaaAaAAAAAAaaAaAaaaAAa point 0 nongenic -890 upstream {F08B1.1a.3,F08B1.1c.1} 1083 CB6841_redo II 5337733 1 A T 255 1.00 63 62 0 20 20 @tttTtTTttTttTTTTtTtT point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -411 upstream,1454 into,2231 into,2488 into,3042 into,3059 into {F08B1.1c.3},{F08B1.1b},{F08B1.1c.1,F08B1.1c.2},{F08B1.1a.3},{F08B1.1a.2},{F08B1.1a.1} 1087 CB6841_redo II 5635095 1 C G 255 1.00 63 62 0 15 15 @GgGGgGggGGggGgg point 0 missense,SNP GAA->CAA[Glu->Gln],none {F59E12.8},{haw25459} 1088 CB6841_redo II 5647429 1 C T 255 1.00 63 62 0 22 22 @TTtTtTTttTTtTTTTTttttt point 0 silent,SNP AAG->AAA[Lys->Lys],none {F59E12.10},{haw25466} 1091 CB6841_redo II 5679958 1 G C 19 1.00 63 42 0 4 4 @ccCc point 0 nongenic,nongenic -1001 upstream,-1745 upstream {C25H3.5},{C25H3.8} 1093 CB6841_redo II 5723522 1 G T 190 1.00 63 62 0 9 9 @CtttTTTTT point 0 nongenic,nongenic 1178 into,1791 into {C18A3.6b.1},{C18A3.6a,C18A3.6b.2} 1098 CB6841_redo II 5824233 1 T C 255 1.00 63 62 0 23 23 @ccCCCCccccCCCcccccccccc point 0 silent GAA->GAG[Glu->Glu] {ZK1248.10} 1099 CB6841_redo II 5824589 1 G A 255 1.00 63 62 0 44 44 @AaaAAaAaaaAaaaAAaaaaAAAaAaAaaAaAAAAAAaaaAaAa point 0 silent CTG->TTG[Leu->Leu] {ZK1248.10} 1100 CB6841_redo II 5861709 1 G A 7 1.00 63 62 2 3 5 @,,AAA point 0 nongenic,nongenic -2452 upstream,-3317 upstream {F55C12.7.1,F55C12.7.2,F55C12.7.3},{F55C12.4} 1102 CB6841_redo II 5863711 1 G A 79 1.00 63 62 0 4 4 @AAaA point 0 nongenic,nongenic -450 upstream,-5319 upstream {F55C12.7.1,F55C12.7.2,F55C12.7.3},{F55C12.4} 1104 CB6841_redo II 5915052 1 G A 229 1.00 63 62 0 11 11 @AAAaaAaaaaa point 0 five_prime_UTR,missense none,GCG->ACG[Ala->Thr] {F59G1.1d.1,F59G1.1d.2,F59G1.1d.3,F59G1.1d.4,F59G1.1d.5},{F59G1.1a,F59G1.1b.1,F59G1.1b.2,F59G1.1c.1,F59G1.1c.2} 5477 CB6841_redo II 5931438 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @,.,cc indel 0 nongenic -2020 upstream {F28B12.2a} 1106 CB6841_redo II 5960458 1 C T 255 1.00 63 62 0 22 22 @TTTtTTtttTtTTtTtTtTTtt point 0 SNP none {haw25654} 1109 CB6841_redo II 5978559 1 C G 3 1.00 63 62 2 2 4 @gg.. point 0 nongenic,nongenic -3630 upstream,-9939 upstream {B0034.5},{ZK75.2} 5479 CB6841_redo II 5990758 0 X X -1000 -999.99 -1000 -1000 2 1 3 @,,Cc indel 0 nongenic,nongenic -48 upstream,-5599 upstream {ZK75.3},{ZK75.1} 1112 CB6841_redo II 5992175 1 C T 38 1.00 63 32 2 4 6 @tTtT., point 0 nongenic,nongenic -1465 upstream,-4181 upstream {ZK75.3},{ZK75.1} 1113 CB6841_redo II 5992176 1 T C 40 1.00 63 32 2 4 6 @cCcC., point 0 nongenic,nongenic -1466 upstream,-4180 upstream {ZK75.3},{ZK75.1} 1118 CB6841_redo II 6118993 1 A G 9 1.00 63 26 3 4 7 @,..GGgg point 0 nongenic,nongenic -4772 upstream,-771 upstream {C29H12.2.1},{C29H12.6} 1119 CB6841_redo II 6118994 1 G A 26 1.00 63 8 2 5 7 @..AAaaA point 0 nongenic,nongenic -4771 upstream,-772 upstream {C29H12.2.1},{C29H12.6} 1120 CB6841_redo II 6187721 1 C T 18 1.00 63 62 4 5 9 @ttttt,,,, point 0 nongenic -408 upstream {F40H3.6} 5484 CB6841_redo II 6200178 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,,GG indel 0 inframe none {C30B5.1} 1124 CB6841_redo II 6296828 1 A C 3 2.62 0 2 27 42 69 @cC.ccccCCcccC,cc,,CCcCc,CCC,.CCC,cCCccccccCCCCcc..c,,c,,..,.,,,,,,,,, point 0 nongenic,nongenic -2724 upstream,366 downstream {C29F5.4a,C29F5.4b},{C29F5.5} 1125 CB6841_redo II 6296972 1 C T 6 1.62 63 62 43 47 90 @T.TTt.,T,tt.t.,..ttt....,Ttt.,,t.,ttTTTTtt,tttT.tt,T,tt.ttt..T.t,T,t.t,,tttT..,.t.a.,...t. point 0 nongenic,nongenic -2868 upstream,222 downstream {C29F5.4a,C29F5.4b},{C29F5.5} 1128 CB6841_redo II 6451387 1 A T 255 1.00 63 62 0 17 17 @tttTtTtTTTtTttTTT point 0 SNP none {haw25895} 1140 CB6841_redo II 6527423 1 G A 255 1.00 63 62 0 37 37 @AAaAaAaaaAAaAAAAaAAAAAAAAAAaAAaAAaaAa point 0 silent,SNP ATC->ATT[Ile->Ile],none {C56E6.4},{haw25905} 1141 CB6841_redo II 6527424 1 A T 255 1.00 63 62 0 37 37 @TtTtTtttTTtTTTTtTTTTTTTTTTtTTtTTttTtT point 0 missense,SNP ATC->AAC[Ile->Asn],none {C56E6.4},{haw25906} 1142 CB6841_redo II 6533053 1 C T 14 1.00 63 20 2 3 5 @..TtT point 0 nongenic,nongenic -1492 upstream,926 into {C56E6.5},{C56E6.1} 1143 CB6841_redo II 6533054 1 T C 21 1.00 63 14 2 4 6 @..CcCC point 0 nongenic,nongenic -1493 upstream,927 into {C56E6.5},{C56E6.1} 5486 CB6841_redo II 6539462 1 X X -1000 -999.99 -1000 -1000 2 0 2 @.. indel -1 SNP none {snp_C56E6[1]} 1147 CB6841_redo II 6547248 1 T G 17 1.00 63 10 1 3 4 @,gGg point 0 nongenic,nongenic,nongenic -2948 upstream,-7677 upstream,450 into {C56E6.6},{F18C5.2},{F18C5.3} 5490 CB6841_redo II 6620906 0 X X -1000 -999.99 -1000 -1000 8 -6 2 @,.,.,,..Gg indel 0 nongenic,nongenic,nongenic,nongenic -11600 upstream,-1194 downstream,-1231 upstream,-965 downstream {C56C10.12},{F54H5.4b},{F54H5.3},{F54H5.4a} 1148 CB6841_redo II 6620907 1 C G 148 1.00 63 62 2 8 10 @GgGgGGgg,. point 0 nongenic,nongenic,nongenic,nongenic -11601 upstream,-1229 upstream,1193 into,964 into {C56C10.12},{F54H5.3},{F54H5.4b},{F54H5.4a} 1149 CB6841_redo II 6620908 1 G C 148 1.00 63 62 2 8 10 @CcCcCCcc,. point 0 nongenic,nongenic,nongenic,nongenic -11602 upstream,-1228 upstream,1192 into,963 into {C56C10.12},{F54H5.3},{F54H5.4b},{F54H5.4a} 1150 CB6841_redo II 6640325 1 C G 52 1.00 63 62 2 4 6 @gggg.. point 0 nongenic 2740 into {T19D12.6} 1151 CB6841_redo II 6656985 1 T C 25 1.75 63 4 2 2 4 @CC., point 0 nongenic,nongenic,nongenic -2653 upstream,-3235 upstream,1829 into {T19D12.9},{T19D12.3},{T19D12.10} 1154 CB6841_redo II 6669138 1 G C 103 1.00 63 62 2 8 10 @cccccccc,, point 0 silent TCG->TCC[Ser->Ser] {T19D12.1} 5494 CB6841_redo II 6720673 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @..,cc indel 0 nongenic,nongenic,nongenic -302 downstream,477 downstream,551 downstream {T14B4.8},{T14B4.4b.1},{T14B4.4a.1,T14B4.4a.2,T14B4.4b.2} 161895 CB6841_redo II 6730772 71 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2881 to 2952 bp into {T14B4.9} 1169 CB6841_redo II 6734010 1 C T 182 1.00 63 62 0 9 9 @TTtTTTtTt point 0 nongenic,nongenic -286 upstream,-836 upstream {T14B4.9},{T14B4.3} 1170 CB6841_redo II 6734012 1 T C 92 1.00 63 62 0 7 7 @CCCcCcC point 0 nongenic,nongenic -288 upstream,-834 upstream {T14B4.9},{T14B4.3} 1171 CB6841_redo II 6734013 1 C T 89 1.00 63 62 0 5 5 @TtTtT point 0 nongenic,nongenic -289 upstream,-833 upstream {T14B4.9},{T14B4.3} 1172 CB6841_redo II 6736304 1 C G 255 1.00 63 62 0 32 32 @GGGgGGGgGgggGGggGgggggGggGgGGggg point 0 missense,SNP TCC->TGC[Ser->Cys],none {T14B4.2},{haw25953} 1173 CB6841_redo II 6736306 1 T C 255 1.00 63 62 0 30 30 @CcCCCcCcccCCccCcccccCccCcCCccc point 0 missense,SNP TTC->CTC[Phe->Leu],none {T14B4.2},{haw25954} 1174 CB6841_redo II 6736474 1 A C 84 1.00 63 62 0 5 5 @CCcCc point 0 missense AAC->CAC[Asn->His] {T14B4.2} 1175 CB6841_redo II 6736476 1 C A 108 1.00 63 62 0 5 5 @AaAaA point 0 missense AAC->AAA[Asn->Lys] {T14B4.2} 1176 CB6841_redo II 6736477 1 A C 101 1.00 63 62 0 5 5 @CcCcC point 0 missense AAG->CAG[Lys->Gln] {T14B4.2} 1183 CB6841_redo II 6739754 1 C T 255 1.00 63 62 0 37 37 @tTttttttTttttTtTTTTttTtTTTttTTTTtttTt point 0 missense TCA->TTA[Ser->Leu] {T14B4.1} 1184 CB6841_redo II 6745223 1 A C 42 1.00 63 62 1 4 5 @,CCCC point 0 nongenic,nongenic -552 upstream,196 downstream {F41G3.17},{F41G3.16} 1185 CB6841_redo II 6745251 1 A C 255 1.00 63 62 0 17 17 @CCCCCccCCCCCcccCC point 0 nongenic,nongenic -580 upstream,168 downstream {F41G3.17},{F41G3.16} 5497 CB6841_redo II 6749217 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,..TT indel 0 inframe none {F41G3.10} 1186 CB6841_redo II 6750712 1 T G 23 1.00 63 62 4 6 10 @,.,,gggggg point 0 silent GGA->GGC[Gly->Gly] {F41G3.20} 1187 CB6841_redo II 6755908 1 A T 255 1.00 63 62 0 27 27 @tTTTTtttttTtTTTtTTTTTTTtTtT point 0 SNP none {haw25965} 1188 CB6841_redo II 6759798 1 A T 115 1.00 63 62 3 9 12 @...tttTtTtTT point 0 nongenic,nongenic,nongenic 568 into,824 downstream,936 downstream {F41G3.2},{F41G3.12},{F41G3.3} 1189 CB6841_redo II 6759908 1 C T 148 1.00 63 54 0 5 5 @TtTtT point 0 missense CCC->TCC[Pro->Ser] {F41G3.2} 1191 CB6841_redo II 6759919 1 A G 47 1.00 63 0 0 4 4 @ggGg point 0 silent GAA->GAG[Glu->Glu] {F41G3.2} 1192 CB6841_redo II 6759922 1 C T 80 1.00 63 46 0 5 5 @ttTtt point 0 silent ACC->ACT[Thr->Thr] {F41G3.2} 1193 CB6841_redo II 6762603 1 C T 255 1.00 63 62 0 24 24 @ttTTtTTtTTTtTTTTTtTtTttt point 0 SNP none {haw25977} 1198 CB6841_redo II 6766065 1 C T 255 1.00 63 62 0 25 25 @TTTTTtTTTtTTTTTtTTTtTTtTT point 0 SNP none {haw25988} 1199 CB6841_redo II 6766211 1 C T 255 1.00 63 62 0 34 34 @TtTTtttTtttTTtTTTTtTtTTtTTtTTTtTTT point 0 SNP none {haw25989} 1200 CB6841_redo II 6808829 1 A G 255 1.00 63 62 0 38 38 @ggGggGGGGgggGgGggGGggGggGgGggGggGggGGg point 0 SNP none {haw26048} 1201 CB6841_redo II 6859122 1 A G 255 1.00 63 62 0 30 30 @GGGggGgGgggGGGGGggGgGGGgGGgggg point 0 nongenic,nongenic -885 upstream,-895 upstream {C04A2.7b.1},{C04A2.7a,C04A2.7b.2,C04A2.7c,C04A2.7d} 1202 CB6841_redo II 6878056 1 C T 255 1.00 63 62 0 16 16 @ttTtTTTtTTTtTTtt point 0 SNP none {haw26160} 1203 CB6841_redo II 6896314 1 T A 255 1.00 63 62 0 31 31 @AaaaaaAAaaaaaAaaAaaaAaAAAaaaaaa point 0 SNP none {haw26186} 1204 CB6841_redo II 6908985 1 C T 255 1.00 63 62 0 21 21 @TtTTTTtTtTttTTTtTTTTT point 0 SNP none {haw26205} 1207 CB6841_redo II 6945332 1 C T 255 1.00 63 62 0 27 27 @TtTTtTTtTTTTTTTtTTttTtTTTtt point 0 nongenic,nongenic,nongenic,nongenic -6525 upstream,1091 into,1553 into,2492 into {F22D3.5},{F22D3.2c},{F22D3.2b},{F22D3.2a} 1209 CB6841_redo II 6999734 1 C A 255 1.00 63 62 0 20 20 @aAaAAAAAAAAaAAaAAAAA point 0 SNP none {haw26262} 1211 CB6841_redo II 7003347 1 T A 255 1.00 63 62 0 21 21 @AAaaAaaAAaaaaAAAaaAAA point 0 missense GTA->GAA[Val->Glu] {C52E12.2a,C52E12.2b} 1212 CB6841_redo II 7017747 1 G A 255 1.00 63 62 0 22 22 @aAAaAaaAAaaaAAAaAAAaAA point 0 nongenic,nongenic,nongenic -5117 upstream,-5118 upstream,4702 into {C52E12.3},{C52E12.6},{C52E12.4} 1213 CB6841_redo II 7028429 1 T A 129 1.00 63 0 0 5 5 @aAAaa point 0 nongenic,nongenic,nongenic -9803 upstream,1395 into,1663 into {ZK1127.7},{C52E12.1.2},{C52E12.1.1} 1214 CB6841_redo II 7028430 1 A T 129 1.00 63 0 0 5 5 @tTTtt point 0 nongenic,nongenic,nongenic -9802 upstream,1394 into,1662 into {ZK1127.7},{C52E12.1.2},{C52E12.1.1} 1215 CB6841_redo II 7123163 1 T C 100 1.19 63 62 0 6 6 @cccccc point 0 nongenic,nongenic,nongenic -1432 upstream,-1441 upstream,983 into {F10E7.3},{F10E7.11},{F10E7.2} 1217 CB6841_redo II 7335059 1 A T 255 1.00 63 62 0 32 32 @TTTtTtTTTTTTTTTTTTTTtttttTTTTTTt point 0 nongenic,nongenic -4109 upstream,-4918 upstream {F21D12.1c.2,F21D12.1e},{F21D12.5} 1218 CB6841_redo II 7343871 1 C G 5 1.00 63 52 2 2 4 @Gg.. point 0 nongenic,nongenic,nongenic,nongenic,nongenic -13730 upstream,-2576 upstream,4669 into,4696 into,4703 into {F21D12.5},{F21D12.1c.1},{F21D12.1a},{F21D12.1d},{F21D12.1c.2,F21D12.1e} 1226 CB6841_redo II 7397590 1 C G 31 1.00 63 12 2 3 5 @ggG,. point 0 nongenic,nongenic,nongenic -1360 upstream,301 downstream,843 downstream {C07D10.1},{C07D10.2b.1},{C07D10.2a,C07D10.2b.2} 1227 CB6841_redo II 7398345 1 G A 39 1.00 63 62 2 4 6 @.,aAaa point 0 nongenic -605 upstream {C07D10.1} 1228 CB6841_redo II 7403160 1 C A 35 1.00 63 62 0 4 4 @AAAa point 0 nongenic,nongenic -514 upstream,-5270 upstream {C07D10.4},{K02A2.2} 1230 CB6841_redo II 7433508 1 G C 13 1.00 63 10 1 3 4 @.cCc point 0 nongenic,nongenic -1687 upstream,-2178 upstream {K02A2.1},{K02A2.3} 1231 CB6841_redo II 7466718 1 G A 255 1.00 63 62 0 26 26 @AaaAaaAAAAaaaAAAAAAaAAaaaa point 0 nongenic -3166 upstream {D1022.6} 1232 CB6841_redo II 7472736 1 G A 255 1.00 63 62 0 26 26 @AAAaAaaaaaAaAAAaAaaAAAAAaA point 0 three_prime_UTR none {D1022.7a} 1235 CB6841_redo II 7506629 1 C A 68 1.00 63 26 1 5 6 @.AAAaa point 0 nongenic,nongenic 660 downstream,98 downstream {C28F5.2},{C28F5.1} 1236 CB6841_redo II 7506632 1 A G 116 1.00 63 62 1 5 6 @.GGGgg point 0 nongenic,nongenic 101 downstream,657 downstream {C28F5.1},{C28F5.2} 1237 CB6841_redo II 7547478 1 C T 8 1.00 63 8 2 4 6 @..ttTt point 0 nongenic,nongenic,splice_donor -1787 upstream,580 into,none {ZK1290.2a,ZK1290.2b.1,ZK1290.2b.2},{ZK1290.9},{ZK1290.9} 1241 CB6841_redo II 7618212 1 G A 56 1.00 63 36 0 6 6 @AAaaaa point 0 SNP,three_prime_UTR none,none {haw26758},{R07G3.8} 1242 CB6841_redo II 7618213 1 T G 70 1.00 63 36 0 9 9 @GGggggGGg point 0 three_prime_UTR none {R07G3.8} 1243 CB6841_redo II 7618214 1 G T 37 1.00 63 56 2 5 7 @tt.tTT. point 0 three_prime_UTR none {R07G3.8} 1246 CB6841_redo II 7640260 1 T G 3 1.00 63 8 2 3 5 @,.ggg point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -6097 upstream,10906 into,1831 into,2822 into,9627 into,9657 into {R153.1a},{R153.1g},{R153.1d},{R153.1c},{R153.1b},{R153.1e} 1254 CB6841_redo II 7642132 1 T G 25 1.00 63 42 2 2 4 @.,GG point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -38 upstream,-41 upstream,7755 into,7785 into,9034 into,950 into {R153.1f},{R153.1d},{R153.1b},{R153.1e},{R153.1g},{R153.1c} 1257 CB6841_redo II 7676548 1 C G 55 1.00 63 52 2 4 6 @,.GGGg point 0 nongenic,nongenic,nongenic -5342 upstream,4612 into,4614 into {F18A1.2.2},{F18A1.3a.2,F18A1.3b,F18A1.3c,F18A1.3d,F18A1.3e},{F18A1.3a.1} 1258 CB6841_redo II 7676550 1 G C 52 1.00 63 54 2 4 6 @,.CCCc point 0 nongenic,nongenic,nongenic -5340 upstream,4614 into,4616 into {F18A1.2.2},{F18A1.3a.2,F18A1.3b,F18A1.3c,F18A1.3d,F18A1.3e},{F18A1.3a.1} 1259 CB6841_redo II 7695359 1 G A 255 1.00 63 62 0 34 34 @aaAAaAAaaAaaAAaAaAaaAAaaaAaaaAAaAA point 0 nongenic,nongenic,nongenic -1475 upstream,510 downstream,575 downstream {B0495.4},{B0495.5.1},{B0495.5.2} 1261 CB6841_redo II 7697396 1 T A 74 1.00 63 62 0 4 4 @aAAA point 0 silent GGA->GGT[Gly->Gly] {B0495.5.1,B0495.5.2} 161896 CB6841_redo II 7743765 100 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered non-exonic, 1443 to 1543 bp into,non-exonic, 18938 to 19038 bp into {B0228.4e},{B0228.4a,B0228.4c} 1271 CB6841_redo II 7796862 1 G A 255 1.00 63 62 0 31 31 @AaaAAaAaAaaaaaAaAaAaaAaaAaAaaaA point 0 nongenic,nongenic -14308 upstream,-2612 upstream {T05A6.1},{C06A8.9} 1272 CB6841_redo II 7799888 1 G T 63 1.00 63 62 1 4 5 @,tttT point 0 nongenic,nongenic -11282 upstream,-5638 upstream {T05A6.1},{C06A8.9} 1275 CB6841_redo II 7818965 1 G A 255 2.00 63 62 0 34 34 @aAAAaAAAAAAaaaaAAAAAAaaaaAAAAaAaAA point 0 nongenic,nongenic 1240 into,771 downstream {T05A6.2b},{T05A6.2a.1,T05A6.2a.2} 1276 CB6841_redo II 7856415 1 G A 255 1.00 63 62 0 32 32 @aaAAAaAaAaAaAAaAaaAAaAAAaaaaAaaA point 0 silent ATC->ATT[Ile->Ile] {T09A5.8} 1279 CB6841_redo II 7866905 1 C A 72 1.00 63 12 0 5 5 @aaaaa point 0 missense AGG->ATG[Arg->Met] {T09A5.12.1,T09A5.12.2} 1281 CB6841_redo II 7883746 1 C G 137 1.69 34 62 0 6 6 @GGGGGg point 0 nongenic -9413 upstream {ZK675.1.1,ZK675.1.2} 1282 CB6841_redo II 7913323 1 C A 255 1.00 63 62 0 25 25 @aaAaAaaaAAaAaaAAAAAAaaAAa point 0 SNP none {haw26997} 1283 CB6841_redo II 7960769 1 C G 255 1.00 63 62 0 13 13 @gggGgggGGGGgG point 0 SNP none {haw27047} 1284 CB6841_redo II 8033054 1 T G 10 1.00 63 42 2 3 5 @,,ggG point 0 nongenic -414 upstream {C08B11.4} 1289 CB6841_redo II 8227927 1 G C 255 1.00 63 62 0 23 23 @CCCCCCCCCccccCCCCcCcccC point 0 missense CGC->CCC[Arg->Pro] {M110.5a.1,M110.5a.2,M110.5b,M110.5c,M110.5d} 1290 CB6841_redo II 8227928 1 C G 255 1.00 63 62 0 24 24 @GGGGGGGGGggggGGGGgGgggGG point 0 silent CGC->CGG[Arg->Arg] {M110.5a.1,M110.5a.2,M110.5b,M110.5c,M110.5d} 1291 CB6841_redo II 8262636 1 A G 64 3.62 63 62 6 9 15 @G,GGG,gGG.G...g point 0 nongenic,nongenic -1956 upstream,-3573 upstream {K01C8.1.1},{F35C11.6} 1292 CB6841_redo II 8262652 1 C T 71 6.50 63 62 4 6 10 @TT.T...ttT point 0 nongenic,nongenic -1940 upstream,-3589 upstream {K01C8.1.1},{F35C11.6} 1296 CB6841_redo II 8360601 1 G C 14 1.00 63 24 3 4 7 @,,,cccC point 0 nongenic,nongenic -1290 upstream,-424 upstream {M195.1},{M195.2} 1297 CB6841_redo II 8459512 1 G C 14 9.25 63 2 0 4 4 @CCCc point 0 nongenic,nongenic,nongenic -3111 upstream,-5266 upstream,1764 into {F22B5.6},{F22B5.9},{F22B5.7} 1302 CB6841_redo II 8511618 1 G A 255 1.00 63 62 0 34 34 @AaaaaAAaAaaaAaaAAAAAAaAAaaAAAaaAAA point 0 nongenic,nongenic -2721 upstream,-3366 upstream {T13H5.1a,T13H5.1c},{T13H5.2a} 1303 CB6841_redo II 8584093 1 C T 255 1.00 63 62 0 31 31 @TTtttttTttttttTtttttTtTttttTttT point 0 missense,SNP GGA->GAA[Gly->Glu],none {F54C9.11},{haw27317} 1304 CB6841_redo II 8622310 1 C A 70 1.00 63 62 1 4 5 @AAaA, point 0 nongenic,nongenic -404 upstream,176 downstream {T22C8.3},{T22C8.4} 1305 CB6841_redo II 8715377 1 C T 255 1.00 63 62 0 19 19 @TTTtTtTtTtTTtttTTTt point 0 SNP none {haw27384} 1308 CB6841_redo II 8755591 1 A G 46 1.00 63 62 3 5 8 @,,,gGGgg point 0 nongenic,nongenic,nongenic -432 upstream,639 downstream,913 downstream {K08F8.7},{K08F8.3.1},{K08F8.3.2} 1309 CB6841_redo II 8802488 1 T G 255 1.00 63 62 0 18 18 @GGggggggggGGGgGGgG point 0 silent,SNP TCT->TCG[Ser->Ser],none {F07H5.8},{haw27428} 1311 CB6841_redo II 8833586 1 G C 6 1.00 63 26 2 5 7 @CCccC., point 0 nongenic,nongenic -2778 upstream,-4375 upstream {F46C5.4},{F46C5.2.1} 1315 CB6841_redo II 8894955 1 C T 255 1.00 63 62 0 24 24 @tTtTttTTtttTTttttTttTTTt point 0 SNP none {haw27502} 5524 CB6841_redo II 8896592 1 X X -1000 -999.99 -1000 -1000 4 -2 2 @,,.. indel -1 SNP none {uCE2-1805} 1317 CB6841_redo II 8903260 1 T C 28 1.00 63 26 2 3 5 @cCC., point 0 nongenic,nongenic 1781 into,5298 into {B0457.1c},{B0457.1a,B0457.1b} 1318 CB6841_redo II 8903261 1 G T 26 1.00 63 28 2 3 5 @tTT., point 0 nongenic,nongenic 1780 into,5297 into {B0457.1c},{B0457.1a,B0457.1b} 1319 CB6841_redo II 8907371 1 C T 255 1.00 63 62 0 24 24 @TTtTTtTTTTTttTTTTTtTTTTT point 0 SNP none {haw27506} 1325 CB6841_redo II 8962337 1 A G 255 1.00 63 62 0 33 33 @GgggGggGgGGggGgGGgGgGgggGGgggGGgg point 0 nongenic,nongenic 1727 into,883 downstream {C18E9.10},{C18E9.1} 1333 CB6841_redo II 9092377 1 C T 255 1.00 63 62 0 22 22 @TTTttTttttTttttTtTTttt point 0 SNP none {haw27664} 1335 CB6841_redo II 9241739 1 G A 255 1.00 63 62 1 27 28 @A.AaaAaaaAaaaAAaAaAAaAAAaAAa point 0 nongenic,nongenic,nongenic,nongenic -482 upstream,-487 upstream,2676 into,5234 into {T26C5.3b},{T26C5.3a},{T26C5.3d},{T26C5.3c} 1336 CB6841_redo II 9322175 1 T C 42 1.00 63 20 1 3 4 @CcC, point 0 nongenic,nongenic,nongenic -1708 upstream,184 into,372 downstream {D2013.10},{D2013.1},{D2013.2} 1337 CB6841_redo II 9331348 1 C T 255 1.00 63 62 0 21 21 @tttTtTttTTTtTTTtTtTtt point 0 SNP none {haw27818} 5527 CB6841_redo II 9419090 0 X X -1000 -999.99 -1000 -1000 1 2 3 @.cc indel 0 nongenic,nongenic,nongenic -1313 upstream,853 downstream,885 downstream {M176.4},{M176.3.1},{M176.3.2} 1339 CB6841_redo II 9427750 1 T C 37 1.00 63 42 2 3 5 @ccC.. point 0 nongenic -91 upstream {M176.5} 1340 CB6841_redo II 9428872 1 G A 255 1.00 63 62 0 18 18 @AAaAaaaAAAAaaAAaaA point 0 SNP none {haw27856} 1341 CB6841_redo II 9436563 1 C T 255 1.00 63 62 0 23 23 @ttTtTttttTtTTTtTttttTtT point 0 SNP none {haw27860} 1342 CB6841_redo II 9490848 1 G A 92 1.00 63 8 1 4 5 @AAaa, point 0 nongenic -2666 upstream {T19H5.4a} 1344 CB6841_redo II 9493719 1 T A 69 1.00 63 62 1 5 6 @,aaaAa point 0 nongenic -5537 upstream {T19H5.4a} 1345 CB6841_redo II 9493721 1 C T 126 1.00 63 62 1 6 7 @,tttTtt point 0 nongenic -5539 upstream {T19H5.4a} 1347 CB6841_redo II 9536368 1 G A 119 2.56 63 62 5 19 24 @AAAAAAAaAaaaaa.A..,AAa.A point 0 nongenic -1282 upstream {AH6.12} 1350 CB6841_redo II 9563143 1 T A 38 3.00 63 2 3 4 7 @,..AAAa point 0 nongenic,nongenic -12750 upstream,-3280 upstream {F35H8.5},{F35H8.4} 1351 CB6841_redo II 9572459 1 G A 255 1.00 63 62 0 22 22 @aAaaaAaaAaaaaaAAaAAAAA point 0 nongenic,nongenic -12596 upstream,-3434 upstream {F35H8.4},{F35H8.5} 5534 CB6841_redo II 9964672 0 X X -1000 -999.99 -1000 -1000 1 0 1 @,Ggg indel 0 nongenic -1782 downstream {R53.2} 1370 CB6841_redo II 10019098 1 A C 16 2.69 0 0 0 9 9 @CCCCCCCCC point 0 nongenic -3114 upstream {F52H3.7a} 1371 CB6841_redo II 10135441 1 G C 25 6.25 63 28 2 2 4 @.,CC point 0 nongenic,nongenic,nongenic -2137 upstream,-3693 upstream,569 into {F27E5.4b},{F27E5.5},{F27E5.4a} 1375 CB6841_redo II 10340121 1 T G 255 1.00 63 62 0 25 25 @GGGGggggGGGGGGggGGgGgGggG point 0 missense CAT->CCT[His->Pro] {C07E3.2.1,C07E3.2.2} 1379 CB6841_redo II 10369132 1 G A 255 1.00 63 62 1 30 31 @aaaaAaaaaAAaaAAaAAA,aaAaAaaaaaA point 0 silent ACC->ACT[Thr->Thr] {C07E3.6} 5537 CB6841_redo II 10430280 1 X X -1000 -999.99 -1000 -1000 3 0 3 @,,, indel -1 SNP none {uCE2-1895} 1380 CB6841_redo II 10436909 1 A C 255 1.00 63 62 0 30 30 @CCcCCCcCCCccccCcccccCCCcccCCcc point 0 SNP none {haw28333,snp_E04D5[5]} 1381 CB6841_redo II 10437067 1 G A 255 1.00 63 62 0 18 18 @AaaaaaAaaaaaAAAAAa point 0 SNP none {haw28334} 1382 CB6841_redo II 10473915 1 A G 255 1.00 63 62 0 21 21 @ggggGgGgggGgggGggGggg point 0 SNP none {haw28363} 1383 CB6841_redo II 10566499 1 G T 3 1.00 63 62 3 4 7 @TtTT.,, point 0 nongenic -2327 upstream {C06A1.2} 1384 CB6841_redo II 10601889 1 G A 255 1.00 63 62 0 18 18 @aaAaaAaAaAaaAaaAAA point 0 nongenic 311 into {C14A4.15} 1385 CB6841_redo II 10724355 1 C T 255 1.00 63 62 0 29 29 @tTTTTtTTttTTTTTtTttTTTtTTTtTt point 0 SNP none {haw28599} 1386 CB6841_redo II 10779219 1 G T 255 1.00 63 62 0 22 22 @tttttttTTTtttttttttttt point 0 nongenic,nongenic,nongenic,nongenic -4234 upstream,-6153 upstream,355 into,898 into {C52A11.4d},{R06F6.1.1},{T19E10.1a},{T19E10.1b} 1387 CB6841_redo II 10779220 1 G A 255 1.00 63 62 0 22 22 @aaaaaaaAAAaaaaaaaaaaaa point 0 nongenic,nongenic,nongenic,nongenic -4235 upstream,-6152 upstream,356 into,899 into {C52A11.4d},{R06F6.1.1},{T19E10.1a},{T19E10.1b} 1389 CB6841_redo II 10827063 1 C T 255 1.00 63 62 0 23 23 @TtTtTTTTTTtTTTtTtTTTttt point 0 SNP none {haw28664,snp_VM106R[1]} 1390 CB6841_redo II 10828430 1 C T 255 1.00 63 62 0 29 29 @TTtttTTTTTTTTtTTtttTttTtTtTTT point 0 SNP none {haw28666} 1391 CB6841_redo II 10828577 1 G A 255 1.00 63 62 0 37 37 @aAAAaAaAaAaaAAAaAAAAaAAAAaAAaAAAaAAAa point 0 SNP none {haw28667} 1392 CB6841_redo II 10829219 1 G A 255 1.00 63 62 0 35 35 @AaaaAAaaAaAAaaaAaaAAaAAaaAaaaaaAaaa point 0 SNP none {haw28668} 1396 CB6841_redo II 11092046 1 T C 255 1.00 63 62 0 24 24 @cccccCccCCcCcCCCcCCccCCC point 0 nongenic,nongenic -2665 upstream,-626 upstream {F45E10.1a,F45E10.1b,F45E10.1c,F45E10.1d},{C09H10.1} 1398 CB6841_redo II 11162424 1 A C 11 1.00 63 52 4 6 10 @cCCCCg.,., point 0 nongenic -168 upstream {K07C10.1} 1401 CB6841_redo II 11181038 1 T G 91 1.00 63 62 1 5 6 @,gggGg point 0 SNP none {snp_F37H8[3]} 5543 CB6841_redo II 11196929 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @,,, indel 0 nongenic -6811 upstream {T06D8.1a,T06D8.1b} 5544 CB6841_redo II 11200489 4 X X -1000 -999.99 -1000 -1000 2 -1 1 @,. indel -4 SNP none {snp_F37H8[6]} 1417 CB6841_redo II 11297130 1 G A 255 2.19 63 62 0 12 12 @AAAAaaaAaaAa point 0 nongenic,nongenic -3640 upstream,-486 upstream {C47G2.4},{C47G2.5a,C47G2.5b,C47G2.5c} 1418 CB6841_redo II 11318254 1 A C 36 1.00 63 62 5 7 12 @cCcCCCC...,. point 0 nongenic,nongenic -4071 upstream,903 downstream {T24F1.4},{T24F1.5} 1431 CB6841_redo II 11770604 1 T G 255 1.00 63 62 0 23 23 @GGggGGggGgGGGggGGGGgGGG point 0 nongenic,nongenic -5025 upstream,3352 into {F44E5.3},{F44E5.2} 1432 CB6841_redo II 11770746 1 T A 255 1.00 63 62 0 26 26 @AAAaAaaaaAaAAaaaAAaAaaAaAa point 0 nongenic,nongenic -5167 upstream,3210 into {F44E5.3},{F44E5.2} 1433 CB6841_redo II 11794523 1 A C 255 1.00 63 62 0 24 24 @cccCCcCCcCCCCcCCccCCcCcC point 0 nongenic,nongenic -4429 upstream,2641 into {F43G6.11a,F43G6.11b},{F43G6.4} 1434 CB6841_redo II 11802166 1 G A 244 1.75 63 62 2 22 24 @aaaAAAAaaAAaa.a,aAaAAAAA point 0 missense GGG->GAG[Gly->Glu] {F43G6.11a} 1435 CB6841_redo II 11848441 1 G A 255 1.00 63 62 0 27 27 @aaAAAaaaaAAAaAAAAaaAaAaaAAA point 0 missense TCC->TTC[Ser->Phe] {T27D12.2a,T27D12.2b} 1436 CB6841_redo II 11877599 1 G A 255 1.00 63 62 0 36 36 @AaaAaaaAaaaaAAAaaaAAaAaaAaaaAAAAaAAa point 0 missense GCT->ACT[Ala->Thr] {K12D12.1} 1437 CB6841_redo II 11895182 1 C G 255 1.00 63 62 0 30 30 @GgggGGGGggggGgggggggggGGGGGgGG point 0 nongenic -562 upstream {ZK930.2} 1444 CB6841_redo II 11960791 1 A C 13 1.00 63 0 0 5 5 @ccccc point 0 nongenic,nongenic,nongenic 133 downstream,136 downstream,292 downstream {W03C9.6.1},{W03C9.1},{W03C9.6.2,W03C9.6.3} 1447 CB6841_redo II 12115353 1 C T 255 1.00 63 62 0 20 20 @tTTTTtTtTtTtttTtTTtT point 0 SNP none {haw30080} 1448 CB6841_redo II 12170815 1 G A 255 1.00 63 62 0 31 31 @AaaAaaAaAaaaAaaaAAAaaAAAaAaAaAA point 0 SNP none {haw30197} 1450 CB6841_redo II 12174493 1 G A 255 1.00 63 62 0 19 19 @AAAAAAAaAaaaaAAaAAa point 0 SNP none {haw30201} 1451 CB6841_redo II 12178809 1 C T 255 1.00 63 62 0 21 21 @TtttttTTTTTTttTttTTtt point 0 SNP none {haw30206} 1453 CB6841_redo II 12193173 1 G A 255 1.00 63 62 0 20 20 @aaAAAaaAAaaAAaAaaaAa point 0 nongenic 3382 into {Y57A10A.15} 1464 CB6841_redo II 12343944 1 G A 14 1.44 63 62 11 12 23 @,,.,..,,,..aAaaaAaaAaAA point 0 nongenic,nongenic 737 into,760 downstream {C50E10.4},{C44C11.1a.1} 1465 CB6841_redo II 12370055 1 C A 255 1.00 63 62 0 17 17 @AaaAaaaAAaaAAaaaa point 0 SNP none {haw30684} 1466 CB6841_redo II 12387897 1 T A 255 1.00 63 62 0 19 19 @AaAaAaaaAaaaAAAaaAA point 0 SNP none {haw30711} 1467 CB6841_redo II 12434164 1 G A 199 1.00 63 62 0 11 11 @aaaaaaAaaaa point 0 nongenic,nongenic -1937 upstream,642 into {Y57A10C.7},{Y57A10C.9} 1468 CB6841_redo II 12562077 1 A C 149 1.00 63 32 0 5 5 @CccCC point 0 nongenic,nongenic -1903 upstream,-2020 upstream {F49C5.12},{F49C5.6} 1471 CB6841_redo II 12595553 1 C T 255 1.00 63 62 0 20 20 @tTttttttTTttTTTTTTtt point 0 SNP none {haw31224} 1494 CB6841_redo II 12651851 1 G C 3 4.19 63 0 1 4 5 @CCC.C point 0 nongenic -2812 upstream {Y38E10A.20} 1497 CB6841_redo II 12658929 1 C T 255 1.00 63 62 0 24 24 @TtTTtTtTTtttTTTTttTTtTTT point 0 SNP none {haw31398} 1498 CB6841_redo II 12659508 1 A G 255 1.00 63 62 0 34 34 @gGGGgGgGgGGgGGgggggGGGgGGGggGGGggg point 0 nongenic,nongenic -9241 upstream,4241 into {Y38E10A.21},{Y38E10A.20} 1499 CB6841_redo II 12670938 1 A G 255 1.00 63 62 0 28 28 @gGgggGgggGGGggGGGGgGggGGGGGG point 0 SNP none {haw31411} 1500 CB6841_redo II 12675701 1 T A 39 1.00 63 4 2 4 6 @aAAa.. point 0 nongenic 399 into {Y38E10A.22} 1501 CB6841_redo II 12675703 1 A T 4 1.00 63 38 3 3 6 @TTt.., point 0 nongenic 397 into {Y38E10A.22} 1502 CB6841_redo II 12677412 1 T G 232 1.00 63 62 0 12 12 @GgGGGGGGGGgG point 0 missense AAC->ACC[Asn->Thr] {Y38E10A.23} 1503 CB6841_redo II 12684543 1 G A 255 1.00 63 62 0 15 15 @AaAaaAAAAaaaaAA point 0 SNP none {haw31456} 1504 CB6841_redo II 12684928 1 G A 255 1.00 63 62 0 12 12 @AaAaaAAAAAaa point 0 SNP none {haw31457} 1505 CB6841_redo II 12749829 1 A G 35 8.75 63 62 402 -147 255 @G.,,.,.,G,G,,,,.,,,G.GG,GG...GGG,,,GGG.GGG.G,G,,,.,GGG...GGG,G,G..GG,,G,..G,.G,,,GG,,,,G,,G,GggG,,G point 0 nongenic -11588 upstream {Y46G5A.5} 1506 CB6841_redo II 12749851 1 T C 116 8.69 63 62 523 -268 255 @,,C,C,,C,,...,,,,C,c,,,,,,,,,,,,,,,,C..,,..,,,,,.,,C,,,,,C..,C,,,,,...C,,C,,,,,,,CC,,,,,,,,,,c..cc. point 0 nongenic -11610 upstream {Y46G5A.5} 1507 CB6841_redo II 12758692 1 G A 54 2.00 63 8 1 3 4 @aaa, point 0 nongenic -2012 upstream {Y46G5A.10} 1509 CB6841_redo II 12764190 1 G C 255 1.00 63 62 0 41 41 @cCCCcCcCcccCCCCCCCCcCcccCCccCCcCCCCCcCCcC point 0 SNP none {haw31561} 1510 CB6841_redo II 12764265 1 A T 45 1.00 63 36 2 7 9 @,.tTttTtt point 0 nongenic 2862 into {Y46G5A.10} 1515 CB6841_redo II 12784485 1 T C 255 1.00 63 62 0 13 13 @cCccCcCccCcCc point 0 SNP none {haw31598} 1517 CB6841_redo II 12803492 1 C A 131 1.31 63 62 1 8 9 @.AAAAAAAA point 0 nongenic,nongenic,nongenic -1279 upstream,-7124 upstream,1680 into {Y46G5A.19a.2},{Y46G5A.17.1},{Y46G5A.18a,Y46G5A.18b} 1518 CB6841_redo II 12803501 1 G A 188 1.19 63 62 0 12 12 @AAAAAAAAAAAA point 0 nongenic,nongenic,nongenic -1270 upstream,-7133 upstream,1671 into {Y46G5A.19a.2},{Y46G5A.17.1},{Y46G5A.18a,Y46G5A.18b} 1519 CB6841_redo II 12807213 1 A T 8 1.00 63 62 2 2 4 @,,tT point 0 nongenic,nongenic,nongenic,nongenic,nongenic -2041 upstream,-3744 upstream,2442 into,397 into,456 into {Y46G5A.18a,Y46G5A.18b},{Y46G5A.20},{Y46G5A.19a.2},{Y46G5A.19b},{Y46G5A.19a.1} 1524 CB6841_redo II 12829859 1 C A 201 1.00 63 62 0 8 8 @AAAAaAAa point 0 nongenic,nongenic -756 upstream,-986 upstream {Y46G5A.24},{Y46G5A.23} 1530 CB6841_redo II 13062610 1 T A 255 1.00 63 62 0 14 14 @aaaaAaAaaAaAAa point 0 SNP none {haw31867} 1531 CB6841_redo II 13063714 1 A G 124 1.00 63 62 0 6 6 @GGgGgg point 0 SNP none {snp_F42G4[4]} 1532 CB6841_redo II 13090005 1 T A 255 1.00 63 62 0 30 30 @AAAaAAAAAaaAaaaaaAAAaaaaAAAaaA point 0 missense GAT->GAA[Asp->Glu] {Y81G3A.3} 1534 CB6841_redo II 13092162 1 G T 255 1.94 63 62 0 28 28 @TtTtTttttTtTTTtTTttttTTttTtt point 0 SNP none {snp_Y81G3A[2]} 1535 CB6841_redo II 13092217 1 G A 229 1.00 63 62 0 16 16 @aaaAaaAaaaaaaaaa point 0 SNP none {haw31901,snp_Y81G3A[3]} 1536 CB6841_redo II 13097749 1 C G 13 2.81 0 12 0 5 5 @ggggg point 0 nongenic,nongenic,nongenic -1202 upstream,407 downstream,435 into {Y81G3A.5b},{F29C12.3},{Y81G3A.5a} 1538 CB6841_redo II 13239531 1 G C 255 1.00 63 62 0 36 36 @CCCCcCCCCcCcccCcCCccccCcccCCcccccccc point 0 missense GAC->GAG[Asp->Glu] {F15D4.4} 1539 CB6841_redo II 13350116 1 C A 255 1.00 63 62 0 24 24 @aAAaaaaAaaAAaAAAaAAAaaAa point 0 SNP none {haw32310} 1540 CB6841_redo II 13378340 1 G A 255 1.00 63 62 0 11 11 @aaAAaAAAAaa point 0 SNP none {haw32413} 1544 CB6841_redo II 13408374 1 C A 172 1.00 63 62 0 6 6 @AAAaaa point 0 nongenic,nongenic,nongenic,nongenic -4178 upstream,1162 into,2021 into,2307 into {Y48C3A.18a},{Y48C3A.17b},{Y48C3A.17c},{Y48C3A.17a,Y48C3A.17d} 1545 CB6841_redo II 13434751 1 G T 137 1.81 63 62 0 6 6 @tttttt point 0 nongenic,nongenic 937 into,948 into {Y48E1C.4a},{Y48E1C.4b} 1546 CB6841_redo II 13434786 1 G T 104 2.00 63 62 0 4 4 @tttt point 0 nongenic,nongenic 972 into,983 into {Y48E1C.4a},{Y48E1C.4b} 1547 CB6841_redo II 13440583 1 G T 255 1.00 63 62 0 40 40 @TTTTtttttTTTttTTTtTTTTtttTTttTtTTTTTtttt point 0 missense,SNP ACG->AAG[Thr->Lys],none {Y48E1C.3},{haw32539} 1548 CB6841_redo II 13452555 1 A G 197 3.94 63 62 0 11 11 @gGgGGGggGGg point 0 nongenic,nongenic -5051 upstream,3796 into {E01G4.1},{E01G4.4} 1549 CB6841_redo II 13485389 1 T C 255 1.00 63 62 0 19 19 @CcCcCcCCCCCcCcccccC point 0 silent TGT->TGC[Cys->Cys] {E01G4.6} 5557 CB6841_redo II 13504678 5 X X -1000 -999.99 -1000 -1000 3 -2 1 @..cccc, indel -5 nongenic,nongenic,nongenic -3044 upstream,693 into,947 downstream {F54F11.2a},{F54F11.1},{F45H10.5} 1550 CB6841_redo II 13528270 1 A G 255 1.00 63 62 0 25 25 @ggGgGgGGgGGggGGgGgGGgggGg point 0 nongenic,nongenic,nongenic 2857 into,2859 into,689 into {Y48E1B.14a.2},{Y48E1B.14a.1},{Y48E1B.14b} 1551 CB6841_redo II 13578367 1 A G 238 1.00 63 62 0 17 17 @GgGgGGggGGGGgGGGG point 0 nongenic,nongenic,nongenic -3397 upstream,-7267 upstream,2535 into {Y48E1B.5},{Y48E1B.8},{Y48E1B.7} 1552 CB6841_redo II 13579405 1 T A 227 1.25 63 62 0 22 22 @AaaAaAaAaaaaaaaAaaaaaa point 0 nongenic,nongenic,nongenic -4435 upstream,-6229 upstream,3573 into {Y48E1B.5},{Y48E1B.8},{Y48E1B.7} 1553 CB6841_redo II 13579440 1 T A 255 1.31 63 62 0 19 19 @aaAaaaaaaAaaaAAaaAa point 0 nongenic,nongenic,nongenic -4470 upstream,-6194 upstream,3608 into {Y48E1B.5},{Y48E1B.8},{Y48E1B.7} 1558 CB6841_redo II 13722005 1 C A 237 1.12 63 62 0 11 11 @aaaAaAAAaAa point 0 SNP none {haw33062} 1559 CB6841_redo II 13738653 1 T A 34 1.00 63 62 4 6 10 @....AAAAAA point 0 nongenic -3007 upstream {R06B9.6} 1560 CB6841_redo II 13801366 1 C A 255 1.00 63 62 0 22 22 @AAaaAaaAaAAAAaAAaaaAaA point 0 SNP none {haw33213} 1561 CB6841_redo II 13808540 1 T A 79 1.00 63 60 2 4 6 @AAAa., point 0 SNP none {haw33237,pas11602} 1562 CB6841_redo II 13835099 1 G C 32 1.00 63 62 5 6 11 @CcCCcc..,,. point 0 silent CGC->CGG[Arg->Arg] {F08G2.6} 1569 CB6841_redo II 14021243 1 G T 212 8.19 63 62 0 10 10 @TtTTtTTTTT point 0 nongenic -393 upstream {F01D5.10} 1572 CB6841_redo II 14171676 1 C T 255 1.00 63 62 0 26 26 @TttTtTtTTTtttttttTttTttttt point 0 SNP none {haw33776} 1573 CB6841_redo II 14211019 1 C G 255 1.00 63 62 0 24 24 @ggGgGGGTgggGGggGggggGgGG point 0 SNP none {haw33827} 1574 CB6841_redo II 14260657 1 A C 159 2.56 63 62 0 11 11 @CcCCCCCCCCC point 0 nongenic,nongenic -15895 upstream,4405 into {Y54G11A.3},{Y54G11A.1} 1575 CB6841_redo II 14261823 1 G C 170 1.00 63 62 0 7 7 @ccccccC point 0 SNP none {haw33932} 1577 CB6841_redo II 14276713 1 T C 255 1.00 63 62 0 17 17 @cCcCcCCccCCCCCCCC point 0 silent,SNP TTG->CTG[Leu->Leu],none {Y54G11A.3},{haw33969} 1585 CB6841_redo II 14279456 1 C A 163 4.81 63 62 0 15 15 @aaaaAAAaAaaaaAa point 0 nongenic,nongenic -10400 upstream,2904 into {Y54G11A.1},{Y54G11A.3} 1586 CB6841_redo II 14311576 1 T C 255 1.00 63 62 0 17 17 @ccccccCCcccCCCCCc point 0 nongenic,nongenic -6483 upstream,-894 upstream {Y54G11A.14},{Y54G11A.13} 1587 CB6841_redo II 14316496 1 A T 255 1.00 63 62 0 26 26 @tTTtTttTTTTttTTTtTTTttTTTT point 0 nongenic,nongenic -1563 upstream,-5814 upstream {Y54G11A.14},{Y54G11A.13} 1591 CB6841_redo II 14337929 1 G T 5 3.00 0 0 0 9 9 @aTtTTtttt point 0 SNP none {haw34038} 1603 CB6841_redo II 14406898 1 T C 255 1.00 63 62 1 24 25 @CCCCCCCcCCCcCcCCcCCCccCc. point 0 silent,SNP TTT->TTC[Phe->Phe],none {F26H11.2c,F26H11.2d.1,F26H11.2d.2,F26H11.2e,F26H11.2f,F26H11.2g},{snp_F26H11[1]} 1605 CB6841_redo II 14692305 1 T A 3 6.00 0 4 8 8 16 @A,,,,a,aaa,,,aaa point 0 nongenic -8105 upstream {K02B7.4} 1606 CB6841_redo II 14738877 1 A T 7 1.00 63 44 3 4 7 @.,,tTtt point 0 nongenic,nongenic -10924 upstream,269 into {C09F9.3a,C09F9.3b,C09F9.3c},{Y54E2A.1} 1607 CB6841_redo II 14738880 1 T C 44 1.00 63 6 2 4 6 @,,cCcc point 0 nongenic,nongenic -10927 upstream,266 into {C09F9.3a,C09F9.3b,C09F9.3c},{Y54E2A.1} 1608 CB6841_redo II 14796259 1 G T 255 1.00 63 62 0 30 30 @TTttTtTtttTTttTttTTTTTTTTttttt point 0 missense,missense,SNP GGG->GTG[Gly->Val],TGG->TGT[Trp->Cys],none {Y54E2A.11b.1,Y54E2A.11b.2},{Y54E2A.11a.1,Y54E2A.11a.2},{uCE2-2369} 1614 CB6841_redo II 14872831 1 C A 255 1.00 63 62 0 29 29 @aaaAaaAaAaaAaaaaaaaaaaAaaaAAA point 0 nongenic 2986 into {R05H10.3a,R05H10.3b} 1617 CB6841_redo II 14993339 1 T C 95 2.88 63 62 22 50 72 @c.,c,..C,cC.C,..C,C.cCcCcCCCccc.CCcc,ccCcC.cc,c,CCcc.CcCCcc,cccCcCcCC,., point 0 nongenic 33 downstream {Y53F4B.7} 1619 CB6841_redo II 15043614 1 C T 108 1.44 63 62 0 19 19 @TttTtttTTtTtTTTTtTt point 0 ncRNA none {Y53F4B.45} 1620 CB6841_redo II 15043625 1 C G 27 1.50 0 26 0 18 18 @GgGGGGgGgGgGGgGggg point 0 ncRNA none {Y53F4B.45} 1621 CB6841_redo II 15049606 1 C T 42 5.31 63 62 12 22 34 @,.t.tTtTtT,TtTTTT.T.,T.T.TttT,tt.. point 0 nongenic 799 downstream {Y53F4B.15} 1629 CB6841_redo III 33481 1 G C 4 1.00 63 2 3 6 9 @CC,,,cccc point 0 nongenic -9518 upstream {H10E21.5} 1630 CB6841_redo III 33483 1 T C 3 1.00 63 4 3 6 9 @CCC,Cc.c. point 0 nongenic -9520 upstream {H10E21.5} 1631 CB6841_redo III 33485 1 T C 4 1.00 63 2 3 6 9 @CC,,,ccgc point 0 nongenic -9522 upstream {H10E21.5} 1632 CB6841_redo III 38559 1 G T 44 1.00 63 6 2 5 7 @.,TtTtt point 0 nongenic,nongenic,nongenic -14596 upstream,-2500 upstream,903 into {H10E21.5},{W05G11.3.1},{W05G11.4} 1637 CB6841_redo III 53324 1 C G 3 1.00 63 0 1 3 4 @G,gg point 0 nongenic -4376 upstream {W05G11.2} 1642 CB6841_redo III 118298 1 T G 255 1.00 63 62 0 39 39 @gggGgGGggGggggGGgGGGGGgGgGggggGgGggGGGg point 0 silent GTT->GTG[Val->Val] {C29F9.5} 161908 CB6841_redo III 133090 57 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 666 to 723 bp into {C29F9.1} 1644 CB6841_redo III 277155 1 G A 4 1.06 63 62 7 12 19 @AAAA.,.AAA,aaaA,A,. point 0 nongenic,nongenic -6960 upstream,5727 into {Y50D7A.9},{Y50D7A.2} 1645 CB6841_redo III 346575 1 C A 71 9.94 63 62 12 14 26 @,G..G.,,,.....aAAAAAAAaAAa point 0 nongenic,nongenic,nongenic,nongenic,nongenic -3334 upstream,1638 into,1769 into,1791 into,1858 into {Y50D7A.8},{W07B3.2a.2,W07B3.2b,W07B3.2c.2,W07B3.2f},{W07B3.2d},{W07B3.2c.1},{W07B3.2a.1} 1649 CB6841_redo III 414659 1 T A 3 6.44 0 20 7 16 23 @,aa,a.aaaaaaaaaaa.a,,,a point 0 nongenic,nongenic -14639 upstream,4079 into {Y55B1BR.3},{Y55B1BM.1a,Y55B1BM.1b,Y55B1BM.1c} 1650 CB6841_redo III 424365 1 C G 13 7.00 63 12 0 5 5 @ggggg point 0 nongenic,nongenic -4933 upstream,-5627 upstream {Y55B1BR.3},{Y55B1BM.1a,Y55B1BM.1b,Y55B1BM.1c} 1654 CB6841_redo III 498870 1 C A 239 3.19 63 62 9 47 56 @aaAA,AAaaaaaaa,aaAaaaa,aa.aa,aaaaAaAAaAA.aaaAaaAAa,A,,aA point 0 nongenic 3720 into {F30H5.1} 1666 CB6841_redo III 513526 1 A G 33 1.00 63 0 0 4 4 @gggg point 0 SNP none {uCE3-597} 1667 CB6841_redo III 543654 1 A C 131 1.00 63 62 0 5 5 @cCccC point 0 nongenic,nongenic,nongenic -13860 upstream,-16740 upstream,1591 into {B0353.1b},{T22F7.4},{T22F7.1} 1673 CB6841_redo III 661018 1 A G 104 1.00 63 52 1 6 7 @GggGgg. point 0 silent AGA->AGG[Arg->Arg] {C09F5.1} 1675 CB6841_redo III 691185 1 C T 255 1.00 63 62 0 30 30 @TTTttTtTtTTTttTTtTtTTTttTTTttt point 0 silent,SNP GAG->GAA[Glu->Glu],none {W02B3.7},{haw37341} 1676 CB6841_redo III 705103 1 G C 79 3.38 63 62 3 6 9 @cccCcC.,, point 0 nongenic,nongenic,nongenic -1224 upstream,-8652 upstream,10732 into {C24A1.2a},{C24A1.3b},{C24A1.2b} 1677 CB6841_redo III 752175 1 G T 255 1.00 63 62 0 23 23 @TtTTtTtTttTttTtTTtTTTtt point 0 nongenic,nongenic -5489 upstream,246 into {T17H7.4a.1,T17H7.4a.2,T17H7.4b.1,T17H7.4b.2,T17H7.4c.1,T17H7.4c.2,T17H7.4g.2},{T17H7.4a.3,T17H7.4b.3,T17H7.4c.3,T17H7.4j} 1680 CB6841_redo III 758870 1 C A 42 1.00 63 0 0 5 5 @AaaAa point 0 nongenic,nongenic -2614 upstream,-800 upstream {F42G9.4},{T17H7.7} 1683 CB6841_redo III 758902 1 C T 63 1.00 63 34 0 5 5 @tTttt point 0 nongenic,nongenic -2582 upstream,-832 upstream {F42G9.4},{T17H7.7} 1684 CB6841_redo III 792814 1 G C 25 1.19 63 32 4 4 8 @,.,,cCCc point 0 nongenic,nongenic -1477 upstream,868 into {B0412.4.1},{F42G9.7} 1687 CB6841_redo III 844171 1 G C 16 1.00 63 0 4 5 9 @.,,,ccCCC point 0 nongenic,nongenic -1666 upstream,378 downstream {K02F3.2},{K02F3.3} 1692 CB6841_redo III 932357 1 C G 22 1.00 63 0 1 4 5 @gg,gg point 0 nongenic -6055 upstream {F23H11.8a,F23H11.8b.1,F23H11.8b.2,F23H11.8b.3} 1693 CB6841_redo III 979254 1 T G 5 1.00 63 18 1 5 6 @GG,ggg point 0 nongenic,nongenic,nongenic,nongenic -3993 upstream,-7241 upstream,1185 into,1882 into {R06B10.4a,R06B10.5.2},{R06B10.1},{R06B10.2},{R06B10.5.1} 1694 CB6841_redo III 979256 1 A G 19 1.00 63 0 0 6 6 @GGGggg point 0 nongenic,nongenic,nongenic,nongenic -3991 upstream,-7243 upstream,1183 into,1884 into {R06B10.4a,R06B10.5.2},{R06B10.1},{R06B10.2},{R06B10.5.1} 1699 CB6841_redo III 1091295 1 C G 3 1.00 63 0 1 3 4 @GG,g point 0 nongenic,nongenic -11916 upstream,3767 into {F58B6.2},{F58B6.3b} 1722 CB6841_redo III 1318411 1 C G 8 1.06 63 62 7 7 14 @.G.g,,Gg,,,Ggg point 0 SNP none {haw38527} 1723 CB6841_redo III 1323866 1 G A 255 1.00 63 62 0 22 22 @aAaAaAaaAaAAaaaAAAAaaa point 0 nongenic,nongenic -178 upstream,-4767 upstream {Y82E9BL.10},{Y82E9BL.18} 1724 CB6841_redo III 1350332 1 C T 48 1.06 63 62 11 15 26 @tTTt,t.TtTT,T,,.,t,Tt..Tt, point 0 nongenic,nongenic,nongenic -941 upstream,495 into,873 downstream {Y82E9BL.4},{Y82E9BL.3},{Y82E9BL.2} 1729 CB6841_redo III 1600168 1 C T 7 1.00 63 0 2 3 5 @.,tTt point 0 nongenic,nongenic -10775 upstream,-4811 upstream {Y22D7AL.8},{Y22D7AL.6b} 1731 CB6841_redo III 1629052 1 C T 250 1.00 63 62 0 15 15 @ttttttttttTttTt point 0 SNP none {haw39277} 1733 CB6841_redo III 1636696 1 G A 202 1.00 63 62 0 13 13 @aaaaAaaaaaaaA point 0 SNP none {haw39295} 1734 CB6841_redo III 1636742 1 C A 255 1.00 63 62 0 11 11 @AAaAAAaaaaA point 0 SNP none {haw39297} 1735 CB6841_redo III 1636775 1 G A 245 1.00 63 62 0 11 11 @aAAAAaAAaaa point 0 SNP none {haw39298} 1736 CB6841_redo III 1636782 1 G T 226 1.00 63 62 0 9 9 @TTTtTTttt point 0 SNP none {haw39299} 1737 CB6841_redo III 1724479 1 G C 254 1.00 63 62 0 11 11 @CCCCCCcccCc point 0 nongenic,nongenic,nongenic -1811 upstream,1126 into,1297 into {Y22D7AR.12},{Y22D7AR.13.2},{Y22D7AR.13.1} 1738 CB6841_redo III 1863224 1 G T 193 2.38 63 62 0 14 14 @ttAttttTttTtTt point 0 SNP none {haw39736} 1741 CB6841_redo III 2055797 1 C T 255 2.00 63 62 2 27 29 @TTTTtttttTttTTTtTTTTtTttTt..T point 0 nongenic,nongenic -1359 upstream,920 downstream {M01E10.3},{Y39A3A.2} 1754 CB6841_redo III 2365479 1 T C 221 3.69 63 62 0 18 18 @CCCCccCCCCCCcCcCcc point 0 SNP none {haw40568} 1755 CB6841_redo III 2365480 1 A G 196 3.94 63 62 0 17 17 @GGGggGGGGGGgGgGtg point 0 nongenic 787 into {H04J21.2} 1756 CB6841_redo III 2405323 1 C T 255 1.00 63 62 0 20 20 @tTtttttttttTttTTTTTT point 0 SNP none {haw40696} 1766 CB6841_redo III 2565617 1 G A 255 1.19 63 62 0 21 21 @AaTaAaaaaaaaaAAAaAaaa point 0 nongenic,nongenic -1638 upstream,556 into {Y54F10AM.11},{Y54F10AM.1} 1767 CB6841_redo III 2567383 1 T A 255 1.00 63 62 0 21 21 @AAaaaAaAaaAaAAAAAaAAA point 0 nongenic 73 downstream {Y54F10AR.2} 1772 CB6841_redo III 2653185 1 A C 164 1.00 63 62 0 6 6 @CCcccC point 0 nongenic -4887 upstream {H19M22.2a,H19M22.2b,H19M22.2d} 1773 CB6841_redo III 2653187 1 A C 164 1.00 63 62 0 6 6 @CCcccC point 0 nongenic -4885 upstream {H19M22.2a,H19M22.2b,H19M22.2d} 1775 CB6841_redo III 2701751 1 A T 255 1.00 63 62 0 13 13 @TttTTtTTTTtTt point 0 SNP none {haw41217} 1776 CB6841_redo III 2728181 1 A T 100 1.00 63 62 1 5 6 @.TtTTT point 0 SNP none {haw41299} 1777 CB6841_redo III 2728812 1 G T 175 1.31 63 62 0 7 7 @TtTTttT point 0 nongenic,nongenic -3729 upstream,2712 into {Y71H2AM.11},{Y71H2AM.7} 1779 CB6841_redo III 2761515 1 G C 4 1.00 63 0 1 4 5 @C,ccc point 0 nongenic -708 upstream {Y71H2AM.16} 1780 CB6841_redo III 2809673 1 A G 255 1.00 63 62 0 17 17 @gggggggGGGGGGGGGG point 0 nongenic 1320 into {Y71H2AM.3} 1781 CB6841_redo III 2822658 1 G C 152 4.88 63 62 0 7 7 @CCCCCCC point 0 nongenic,nongenic,nongenic -4401 upstream,-7696 upstream,2000 into {Y71H2AM.1.1,Y71H2AM.1.2},{Y71H2AM.23.1},{Y71H2AM.2} 1789 CB6841_redo III 2956888 1 G T 5 1.00 63 62 4 5 9 @ttttt,,,, point 0 nongenic,nongenic,nongenic -1191 upstream,-12853 upstream,3677 into {H05C05.1b},{R10F2.6},{H05C05.1a.1,H05C05.1a.2} 1790 CB6841_redo III 2980599 1 A T 255 1.00 63 62 0 18 18 @TTtTTTTTTTTttttttT point 0 SNP none {haw41691} 1791 CB6841_redo III 2989623 1 G A 255 1.00 63 62 0 24 24 @AaAAAAAAaaAAAaaAaaAaaAAa point 0 nongenic 424 into {Y55D5A.4} 1796 CB6841_redo III 3104250 1 C T 255 1.00 63 62 0 21 21 @tttTTttTTTTttttttTTTt point 0 nongenic -304 upstream {Y53G8B.2} 1797 CB6841_redo III 3161754 1 C G 25 1.00 63 62 2 3 5 @Ggg.. point 0 SNP none {pas48011} 1798 CB6841_redo III 3162633 1 A G 233 1.00 63 62 0 12 12 @GgggGGggGGGG point 0 nongenic -3640 upstream {R148.5a,R148.5b} 1799 CB6841_redo III 3162638 1 A G 229 1.00 63 62 0 11 11 @ggGGggGGGGg point 0 nongenic -3635 upstream {R148.5a,R148.5b} 1801 CB6841_redo III 3173795 1 C T 5 2.12 0 20 2 7 9 @T.TTtt.tt point 0 nongenic -1532 upstream {R148.3a,R148.3b} 1806 CB6841_redo III 3230685 1 T C 15 1.19 0 14 0 6 6 @cccccc point 0 nongenic,nongenic -2405 upstream,43 downstream {Y53G8AL.1},{H09G03.1} 1807 CB6841_redo III 3252687 1 G T 255 1.00 63 62 0 27 27 @TtTTtttTTTtTTtTTtTTTTtttttT point 0 nongenic,nongenic -2701 upstream,446 into {Y53G8AL.4},{Y53G8AL.3} 1808 CB6841_redo III 3254400 1 G C 255 1.19 63 62 0 16 16 @cCCccCCCCCCccCCC point 0 nongenic,nongenic -1267 upstream,386 into {Y53G8AL.3},{Y53G8AM.4} 1809 CB6841_redo III 3255111 1 C A 180 1.00 63 62 0 8 8 @aAAaAAAA point 0 SNP none {haw42163} 1810 CB6841_redo III 3255125 1 C T 237 1.00 63 62 0 10 10 @TTTTtttttt point 0 SNP none {haw42164} 1811 CB6841_redo III 3255131 1 G T 229 1.00 63 62 0 10 10 @TTTttttttt point 0 nongenic,nongenic -1998 upstream,478 into {Y53G8AL.3},{Y53G8AM.4} 1812 CB6841_redo III 3271710 1 A G 241 1.00 63 62 1 14 15 @GGGGgGgGGggg.Gg point 0 SNP none {haw42190} 1813 CB6841_redo III 3271738 1 T A 255 1.00 63 62 0 28 28 @AaAAaaaaAaaAaaaaAAAaAaaAAaaA point 0 SNP none {haw42191} 1814 CB6841_redo III 3281311 1 T C 64 1.00 63 62 1 3 4 @cCC. point 0 nongenic,nongenic -2623 upstream,-985 upstream {Y53G8AM.8.1,Y53G8AM.8.2},{Y53G8AR.7a} 1828 CB6841_redo III 3347713 1 C T 114 1.00 63 60 1 4 5 @.ttTT point 0 nongenic,nongenic -13407 upstream,2849 into {F45H7.2c},{F45H7.2a,F45H7.2b} 1829 CB6841_redo III 3347714 1 T C 148 1.00 63 62 0 5 5 @cccCC point 0 nongenic,nongenic -13406 upstream,2850 into {F45H7.2c},{F45H7.2a,F45H7.2b} 1831 CB6841_redo III 3373714 1 G A 255 1.00 63 62 0 22 22 @AAaAaaAaAAAaaaAaaaAAAa point 0 SNP none {haw42340} 5579 CB6841_redo III 3385875 0 X X -1000 -999.99 -1000 -1000 4 -3 1 @,..,gag indel 1 nongenic,nongenic -15676 upstream,-1948 downstream {F45H7.4.1},{F45H7.6} 1837 CB6841_redo III 3387032 1 T C 250 2.06 63 62 0 14 14 @ccCCCCCCCccccc point 0 missense AAC->AGC[Asn->Ser] {C56G7.2} 1839 CB6841_redo III 3398717 1 T C 255 1.00 63 62 0 16 16 @CCcccccccccCCcCc point 0 nongenic,nongenic -561 upstream,989 into {F59A2.4b},{F59A2.4a} 1840 CB6841_redo III 3404724 1 C T 255 1.00 63 62 0 17 17 @TTtttTTtTTTtttttT point 0 nongenic,nongenic,nongenic,nongenic -138 upstream,-258 upstream,-367 upstream,-837 upstream {F59A2.5},{F59A2.1b.1},{F59A2.1b.2},{F59A2.2a,F59A2.2b} 1841 CB6841_redo III 3429127 1 A C 186 6.94 63 62 0 14 14 @cCccCccccccccc point 0 nongenic 721 into {K01A11.1} 5580 CB6841_redo III 3436724 0 X X -1000 -999.99 -1000 -1000 5 -2 3 @..,,,ggg indel 0 nongenic -5385 upstream {K01A11.1} 1848 CB6841_redo III 3463329 1 C G 255 1.00 63 62 0 14 14 @GgggGgggGGGGgG point 0 SNP none {haw42422} 1849 CB6841_redo III 3467137 1 T C 255 1.00 63 62 0 20 20 @CcCCcCcCcCcCcCCcCccC point 0 SNP,three_prime_UTR none,none {haw42435},{C34C12.3} 1850 CB6841_redo III 3467466 1 C T 255 1.00 63 62 0 24 24 @TTtttTtTttTTtTTTTTttTTTT point 0 SNP,three_prime_UTR none,none {haw42438},{C34C12.3} 1851 CB6841_redo III 3468244 1 C T 25 9.19 63 0 0 5 5 @tttGG point 0 nongenic,nongenic,nongenic,nongenic -3743 upstream,553 into,594 into,596 downstream {C34C12.5.1,C34C12.5.2},{C34C12.4.2},{C34C12.4.1},{C34C12.3} 1852 CB6841_redo III 3468663 1 A C 255 1.00 63 62 0 16 16 @cCCCCCCccCCcCccC point 0 nongenic,nongenic,nongenic -3324 upstream,1013 into,972 into {C34C12.5.1,C34C12.5.2},{C34C12.4.1},{C34C12.4.2} 1854 CB6841_redo III 3517362 1 T G 23 9.00 30 38 3 5 8 @GGG.gG.. point 0 nongenic,nongenic -615 upstream,2230 into {M01F1.5.2},{M01F1.5.1} 1856 CB6841_redo III 3540491 1 C A 21 1.00 63 62 3 4 7 @...aaaa point 0 SNP none {haw42478} 1857 CB6841_redo III 3561423 1 G A 70 1.00 63 46 2 9 11 @,AT,aaaaaaa point 0 nongenic -12145 upstream {C48D5.1a} 1858 CB6841_redo III 3584971 1 T C 255 1.00 63 62 0 26 26 @cccccCCCcCCcCCCcccccCCccCC point 0 nongenic,nongenic -3293 upstream,-5746 upstream {C48D5.3},{C48D5.2a} 1859 CB6841_redo III 3599952 1 G T 14 1.00 63 62 2 5 7 @,,ctcTT point 0 nongenic,nongenic,nongenic,nongenic -18274 upstream,4748 into,834 into,9235 into {C48D5.3},{C48D5.2c},{C48D5.2b},{C48D5.2a} 1860 CB6841_redo III 3599953 1 T C 83 1.00 63 14 2 5 7 @,,cccCC point 0 nongenic,nongenic,nongenic,nongenic -18275 upstream,4749 into,835 into,9236 into {C48D5.3},{C48D5.2c},{C48D5.2b},{C48D5.2a} 1861 CB6841_redo III 3606223 1 A T 231 1.00 63 62 0 11 11 @TTttTTTtTTt point 0 nongenic,nongenic,nongenic -24545 upstream,5324 into,5753 into {C48D5.3},{C48D5.2b,C48D5.2c},{C48D5.2a} 1862 CB6841_redo III 3611202 1 C A 255 1.00 63 62 0 20 20 @aaAaAaaAaaaaaaaAaaAa point 0 SNP none {haw42583} 1863 CB6841_redo III 3613833 1 G T 255 1.00 63 62 0 18 18 @TtttTttTTTTttTTTtT point 0 SNP none {haw42588} 1865 CB6841_redo III 3616756 1 C T 255 1.00 63 62 0 14 14 @ttTTtTttTtTTTt point 0 SNP none {haw42597} 1866 CB6841_redo III 3625872 1 T A 255 1.00 63 62 0 25 25 @AAaAAAAaAaAAAaaaAAAAaAAAA point 0 SNP none {haw42613} 1867 CB6841_redo III 3640945 1 G A 14 1.00 63 32 2 2 4 @,.Aa point 0 nongenic,nongenic,nongenic,nongenic -10404 upstream,-3408 upstream,2382 into,2701 into {C32A3.2},{C46F11.1a},{C32A3.3a.2,C32A3.3a.3,C32A3.3b},{C32A3.3a.1} 1869 CB6841_redo III 3641475 1 G T 255 1.00 63 62 0 24 24 @TttttTTttttttttTtTttTtTT point 0 SNP none {haw42649} 1870 CB6841_redo III 3641888 1 G A 229 1.00 63 62 0 9 9 @aaAaAaAaA point 0 SNP none {haw42650} 1871 CB6841_redo III 3645769 1 C A 255 1.00 63 62 0 17 17 @aaAaaaAAaAaaaAAaA point 0 nongenic,nongenic 1404 into,1416 into {C46F11.1b},{C46F11.1a} 1872 CB6841_redo III 3645821 1 T G 252 1.00 63 62 0 15 15 @GgGGgGGGGgGGgGG point 0 nongenic,nongenic 1456 into,1468 into {C46F11.1b},{C46F11.1a} 1873 CB6841_redo III 3666894 1 G T 30 1.00 63 2 2 4 6 @..TTTT point 0 nongenic,nongenic -2420 upstream,435 downstream {C46F11.4},{C46F11.6} 1874 CB6841_redo III 3708941 1 A T 63 1.00 63 10 3 5 8 @...tTtTT point 0 nongenic,nongenic -367 upstream,238 into {C14B1.10.1,C14B1.10.2},{C14B1.5} 5583 CB6841_redo III 3716559 0 X X -1000 -999.99 -1000 -1000 1 0 1 @,cc indel 3 nongenic -2168 downstream {C14B1.6} 1875 CB6841_redo III 3805252 1 C G 94 1.00 63 20 1 5 6 @GgggG, point 0 nongenic,nongenic -905 upstream,502 into {T24A11.2},{T24A11.3} 1876 CB6841_redo III 3884582 1 C T 255 1.00 63 62 0 31 31 @ttTTTTTTTTTtttttTTTTtTTtTTtTTtt point 0 nongenic,nongenic,nongenic,nongenic -1879 upstream,15009 into,3006 into,6406 into {F13B10.1e.3},{F13B10.1e.1},{F13B10.1c,F13B10.1e.2},{F13B10.1a} 5587 CB6841_redo III 3890729 0 X X -1000 -999.99 -1000 -1000 5 -4 1 @,,.c.,a indel 1 nongenic,nongenic,nongenic -10715 downstream,-259 downstream,-3141 upstream {F13B10.1e.1},{F13B10.1a},{F13B10.1c,F13B10.1e.2} 1888 CB6841_redo III 3995385 1 G A 209 1.00 63 62 0 8 8 @AAaaaAaa point 0 SNP none {haw42814} 1891 CB6841_redo III 3995594 1 C G 18 1.00 63 8 1 3 4 @Ggg, point 0 nongenic -3441 upstream {C36E8.2} 5590 CB6841_redo III 4019157 0 X X -1000 -999.99 -1000 -1000 2 1 3 @,.gg indel 0 nongenic,nongenic -1537 upstream,-881 upstream {C36E8.5.1},{T02C12.2} 1900 CB6841_redo III 4056056 1 A T 71 1.00 63 62 0 4 4 @tttt point 0 nongenic,nongenic -19242 upstream,1893 into {T02C12.1},{E03A3.2} 1901 CB6841_redo III 4056057 1 T A 69 1.00 63 62 0 4 4 @aaaa point 0 nongenic,nongenic -19243 upstream,1892 into {T02C12.1},{E03A3.2} 1902 CB6841_redo III 4056058 1 A C 101 1.00 63 62 0 5 5 @cccCC point 0 nongenic,nongenic -19244 upstream,1891 into {T02C12.1},{E03A3.2} 1903 CB6841_redo III 4099930 1 C T 255 1.00 63 62 0 30 30 @TTtTttttTTTTTTTtTtTTtTtTtTTttt point 0 nongenic,nongenic -1829 upstream,-21505 upstream {C03C10.4},{C30D11.1a} 1904 CB6841_redo III 4100390 1 C T 255 1.00 63 62 0 18 18 @tTttTTTttTtTTtttTt point 0 nongenic,nongenic -21045 upstream,-2289 upstream {C30D11.1a},{C03C10.4} 1905 CB6841_redo III 4112942 1 G C 255 1.00 63 62 0 23 23 @CCcccCCCcCccccCccCcCccC point 0 SNP none {haw42904} 1910 CB6841_redo III 4209221 1 C A 108 1.00 63 62 0 4 4 @AAAA point 0 nongenic,nongenic -1312 upstream,983 downstream {F43C1.1},{R74.8a} 1911 CB6841_redo III 4209222 1 A C 110 1.00 63 62 0 4 4 @CCCC point 0 nongenic,nongenic -1311 upstream,984 downstream {F43C1.1},{R74.8a} 1912 CB6841_redo III 4209243 1 C A 196 1.00 63 62 0 9 9 @AaaAAaaAA point 0 nongenic -1290 upstream {F43C1.1} 1913 CB6841_redo III 4209244 1 G C 197 1.00 63 62 0 9 9 @CccCCccCC point 0 nongenic -1289 upstream {F43C1.1} 1914 CB6841_redo III 4265355 1 C T 255 1.00 63 62 0 33 33 @tTTtttTTttTtTTTTtTtTttTtTtttTttTT point 0 silent CAG->CAA[Gln->Gln] {T08A11.2} 1915 CB6841_redo III 4286569 1 C T 255 1.06 63 62 0 24 24 @ttTTtTttTTtTTTtTtTTTTtTt point 0 SNP none {haw42951} 1916 CB6841_redo III 4333266 1 C T 255 1.00 63 62 0 34 34 @TTtttttTttTTTTTTTttTTTtTtTtttTTttt point 0 nongenic,nongenic -100 upstream,-2067 upstream {B0285.1},{H38K22.5c.1} 1918 CB6841_redo III 4440341 1 G A 255 1.00 63 62 0 33 33 @AaaaAaaAaAaaaaaaaaaaaAaaaAAAaAaaa point 0 SNP none {haw42977,snp_C28A5[2]} 1919 CB6841_redo III 4440871 1 T A 255 1.00 63 62 0 26 26 @AaaaaaaAAaaaaaaaaAaAAAAaAa point 0 SNP none {haw42978} 1936 CB6841_redo III 4605000 1 T A 43 1.00 63 62 2 4 6 @,,AaaA point 0 nongenic,nongenic -11613 upstream,7302 into {F10F2.3},{F10F2.1} 1940 CB6841_redo III 4687672 1 G C 80 1.00 63 20 2 5 7 @,,CCCCc point 0 nongenic,nongenic -1596 upstream,-512 upstream {T04A8.5},{T04A8.4} 1942 CB6841_redo III 4699865 1 C T 255 1.00 63 62 0 33 33 @TTttttttTtTtTtTtttttTttttTtTTTTTt point 0 silent CCG->CCA[Pro->Pro] {T04A8.10} 5597 CB6841_redo III 4708950 2 X X -1000 -999.99 -1000 -1000 12 -8 4 @,,,,,.,,,,.. indel -2 SNP none {uCE3-874} 1943 CB6841_redo III 4712952 1 C G 255 1.00 63 62 0 30 30 @GgGGGggGGgGgGggggggGggGgGGGGgG point 0 missense,SNP TGG->TGC[Trp->Cys],none {T04A8.15},{haw43017,uCE3-875} 1944 CB6841_redo III 4761634 1 G A 255 1.00 63 62 0 31 31 @aaAaAaaAaaaaAAaaAaaaAAAaAAAAAAa point 0 SNP none {haw43024} 1947 CB6841_redo III 4845216 1 A T 255 1.00 63 62 0 27 27 @TtttTTTtttTtTttTttttttTtttt point 0 missense,SNP AAT->ATT[Asn->Ile],none {F26A1.2},{haw43039} 1948 CB6841_redo III 4882422 1 C T 255 1.00 63 62 0 36 36 @tTttttTTttTTTTtTTttTTTTTttTttTtTtTtt point 0 missense GGA->GAA[Gly->Glu] {C35D10.14} 1954 CB6841_redo III 4983226 1 G A 42 1.00 63 62 3 5 8 @...aaAaA point 0 SNP none {haw43061} 1955 CB6841_redo III 4983227 1 A G 67 1.00 63 42 2 5 7 @..ggGgG point 0 SNP none {haw43062} 1956 CB6841_redo III 5017349 1 T C 12 1.00 63 36 2 4 6 @CcCC,, point 0 nongenic,nongenic,nongenic -1260 upstream,-861 upstream,264 into {R144.4a,R144.4b},{R144.7a},{R144.7b} 1957 CB6841_redo III 5030206 1 G T 61 1.00 63 62 2 4 6 @TTtt.. point 0 nongenic,nongenic -685 upstream,608 downstream {R144.1},{R144.2a} 1963 CB6841_redo III 5066883 1 C A 16 1.00 63 16 1 4 5 @,aaAA point 0 nongenic,nongenic -2145 upstream,1803 into {C45G9.2},{C45G9.11} 1964 CB6841_redo III 5066884 1 A G 17 1.00 63 16 1 4 5 @,ggGG point 0 nongenic,nongenic -2144 upstream,1802 into {C45G9.2},{C45G9.11} 1966 CB6841_redo III 5105940 1 C G 8 1.00 63 6 2 2 4 @Gg,. point 0 missense GCG->GGG[Ala->Gly] {F54D8.6} 1967 CB6841_redo III 5105941 1 G C 7 1.00 63 8 2 2 4 @Cc,. point 0 silent GCG->GCC[Ala->Ala] {F54D8.6} 1968 CB6841_redo III 5187472 1 C T 255 1.00 63 62 0 26 26 @TttttTTtTtttTTTtTtttttttTt point 0 nongenic,nongenic,nongenic -1222 upstream,1112 into,372 into {K10D2.1a},{K10D2.2.1},{K10D2.2.2} 1970 CB6841_redo III 5229854 1 C T 255 1.00 63 62 0 29 29 @ttTTtttttTTttttttTTttTTTTTTtt point 0 silent TCC->TCT[Ser->Ser] {C34E10.6.1,C34E10.6.2,C34E10.6.3} 1973 CB6841_redo III 5333259 1 G C 22 1.00 63 2 1 4 5 @.ccCC point 0 missense TGC->TCC[Cys->Ser] {F52C9.1a} 1989 CB6841_redo III 5411250 1 C T 255 1.00 63 62 0 32 32 @TTTTtTTtttttttTtTtttTtTTtttTtTTt point 0 missense ACC->ATC[Thr->Ile] {W03A5.1} 1990 CB6841_redo III 5442416 1 C T 255 1.00 63 62 0 31 31 @TTTTTTtTTTttTTtTtTtttTtTttTTttT point 0 silent AAG->AAA[Lys->Lys] {T24G10.2} 1991 CB6841_redo III 5471938 1 G C 44 1.00 63 22 0 5 5 @cCCCc point 0 nongenic -2496 upstream {F48E8.1a,F48E8.1b,F48E8.1c} 1992 CB6841_redo III 5471939 1 T G 37 1.00 63 22 0 4 4 @GGGg point 0 nongenic -2495 upstream {F48E8.1a,F48E8.1b,F48E8.1c} 1994 CB6841_redo III 5511364 1 C T 255 1.00 63 62 0 24 24 @TTtttTttTtTTTTtTTTTTTttT point 0 missense GGA->GAA[Gly->Glu] {D1044.3} 1997 CB6841_redo III 5583034 1 A G 134 1.00 63 24 0 6 6 @GGGgGg point 0 nongenic,nongenic -54 upstream,-668 upstream {F56D2.4},{F56D2.8} 1998 CB6841_redo III 5595879 1 T G 76 1.00 63 62 1 4 5 @gGgg, point 0 nongenic,splice_donor 155 into,none {F56D2.7},{F56D2.7} 1999 CB6841_redo III 5597702 1 C T 255 1.00 63 62 0 28 28 @TtttTTTtTtTTtTTtttTttTtttttt point 0 silent TTC->TTT[Phe->Phe] {F56D2.7} 2001 CB6841_redo III 5598967 1 T C 3 1.00 63 0 4 6 10 @,.,.cccccc point 0 nongenic,nongenic,nongenic 1047 into,898 into,948 downstream {C05D2.10a.1},{C05D2.10a.2,C05D2.10b},{F56D2.7} 2002 CB6841_redo III 5624265 1 C T 255 1.00 63 62 0 29 29 @tTTTTtTtTtTTTTTtTTTTTTttttTtT point 0 nongenic,nongenic -701 upstream,-829 upstream {C05D2.1a.1},{C05D2.1a.2,C05D2.1c.2,C05D2.1d} 2006 CB6841_redo III 5647756 1 G C 35 1.00 63 0 0 4 4 @cccC point 0 nongenic,nongenic -3737 upstream,6731 into {C05H8.1a},{C05H8.1b} 2008 CB6841_redo III 5664110 1 C T 255 1.00 63 62 0 19 19 @TtTTtTtttTttTTtttTt point 0 nongenic,nongenic,nongenic -212 upstream,-3073 upstream,-74 upstream {F54E7.3a},{F54E7.6},{F54E7.3b} 2009 CB6841_redo III 5665333 1 C T 255 1.00 63 62 0 27 27 @tttttTttttTtTtTttTtTTttTttt point 0 nongenic,nongenic,nongenic,nongenic -3157 upstream,-4296 upstream,1011 into,1149 into {F54E7.3c},{F54E7.6},{F54E7.3a},{F54E7.3b} 5609 CB6841_redo III 5695323 1 X X -1000 -999.99 -1000 -1000 5 -3 2 @,,,,. indel -1 SNP none {uCE3-925} 2010 CB6841_redo III 5755673 1 C T 255 1.00 63 62 0 27 27 @TttttTTTTTTTTttTTTTttTtTtTt point 0 nongenic,nongenic -12158 upstream,186 into {B0244.11},{B0244.2} 2011 CB6841_redo III 5762032 1 C G 28 6.62 63 54 2 3 5 @.,ggG point 0 ncRNA none {B0244.t3} 2012 CB6841_redo III 5762033 1 G C 55 6.00 63 28 2 4 6 @.,ccCC point 0 ncRNA none {B0244.t3} 5611 CB6841_redo III 5765139 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @,,.TTt indel 0 nongenic,nongenic -2693 upstream,-626 downstream {B0244.11},{B0244.2} 2013 CB6841_redo III 5766660 1 C A 6 1.00 63 6 3 4 7 @AAAA,,, point 0 nongenic,nongenic -1171 upstream,895 downstream {B0244.11},{B0244.2} 2014 CB6841_redo III 5766661 1 A T 6 1.00 63 6 3 4 7 @TTTT,,, point 0 nongenic,nongenic -1170 upstream,896 downstream {B0244.11},{B0244.2} 2015 CB6841_redo III 5814252 1 T C 255 1.00 63 62 0 24 24 @CccCCccCccCCCccCccccCCcc point 0 SNP none {haw43460} 2018 CB6841_redo III 5953899 1 A G 75 1.00 63 62 0 4 4 @GGgg point 0 missense TCT->CCT[Ser->Pro] {F25B5.7a,F25B5.7c} 2019 CB6841_redo III 5953900 1 T A 71 1.00 63 62 0 4 4 @AAaa point 0 missense AAA->AAT[Lys->Asn] {F25B5.7a,F25B5.7c} 2020 CB6841_redo III 5953904 1 G T 151 1.00 63 62 0 8 8 @TTttttTT point 0 missense CCA->CAA[Pro->Gln] {F25B5.7a,F25B5.7c} 2021 CB6841_redo III 5958294 1 C G 9 1.00 63 0 1 4 5 @,ggGg point 0 nongenic,nongenic,nongenic,nongenic -101 upstream,-103 upstream,-429 upstream,-948 upstream {F25B5.7d},{F25B5.7b,F25B5.7c},{F25B5.2.1},{F25B5.2.2} 2022 CB6841_redo III 5958295 1 G C 8 1.00 63 0 2 3 5 @,ctC. point 0 nongenic,nongenic,nongenic,nongenic -102 upstream,-104 upstream,-428 upstream,-947 upstream {F25B5.7d},{F25B5.7b,F25B5.7c},{F25B5.2.1},{F25B5.2.2} 2023 CB6841_redo III 5962999 1 C T 255 1.00 63 62 0 14 14 @tttTTtttTtTttt point 0 SNP none {haw43492} 2026 CB6841_redo III 6033358 1 A T 9 1.00 63 38 0 5 5 @tTGGg point 0 missense TCC->ACC[Ser->Thr] {ZK328.7a} 2028 CB6841_redo III 6219238 1 C T 255 1.00 63 62 0 27 27 @TTtttttTTTtTTTtTttTTTTttTTt point 0 nongenic,nongenic -1258 upstream,-3752 upstream {T12A2.16b},{C23G10.11} 2029 CB6841_redo III 6229465 1 C T 255 1.00 63 62 0 27 27 @tTTTTTTTTTttTTtTTTttttTTTTt point 0 SNP none {haw43535} 2030 CB6841_redo III 6231877 1 C T 255 1.00 63 62 0 33 33 @TttTtTTtTTTTtttTTTtTttTtTttTttTTt point 0 SNP none {haw43536} 2031 CB6841_redo III 6280051 1 A C 22 1.00 63 56 2 4 6 @,,Cccc point 0 nongenic,nongenic,nongenic -1750 upstream,-275 upstream,-323 upstream {C18F10.7a.1},{F47D12.4a.1,F47D12.4a.2},{F47D12.4a.3} 5621 CB6841_redo III 6300174 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @,,.,AA indel 0 nongenic,nongenic,nongenic,nongenic,nongenic -433 downstream,-646 downstream,-888 downstream,-9147 upstream,905 downstream {F47D12.9a.1,F47D12.9a.2,F47D12.9b.4},{F47D12.9b.3},{F47D12.9b.1,F47D12.9b.2},{F47D12.1a,F47D12.1b,F47D12.1c,F47D12.1d},{F47D12.3} 2038 CB6841_redo III 6300175 1 G A 41 1.00 63 58 2 4 6 @AAaA,, point 0 nongenic,nongenic,nongenic,nongenic,nongenic -9145 upstream,435 into,648 into,890 into,906 downstream {F47D12.1a,F47D12.1b,F47D12.1c,F47D12.1d},{F47D12.9a.1,F47D12.9a.2,F47D12.9b.4},{F47D12.9b.3},{F47D12.9b.1,F47D12.9b.2},{F47D12.3} 2039 CB6841_redo III 6301652 1 T C 10 1.19 63 62 1 4 5 @.CcCC point 0 nongenic,nongenic,nongenic,nongenic,nongenic -156 upstream,-157 upstream,-7668 upstream,1511 into,801 into {F47D12.9b.2},{F47D12.9b.4},{F47D12.1a,F47D12.1b,F47D12.1c,F47D12.1d},{F47D12.9a.1},{F47D12.9a.2,F47D12.9b.1,F47D12.9b.3} 2041 CB6841_redo III 6322256 1 C A 62 1.00 63 62 2 5 7 @aAAAa., point 0 missense GGG->TGG[Gly->Trp] {C56G2.5} 2042 CB6841_redo III 6330590 1 C T 255 1.00 63 62 0 42 42 @ttTttttTtttTTTTttttttTtTtttTTtttttTtttttTt point 0 nongenic,nongenic -1083 upstream,-6411 upstream {C56G2.4.1},{C56G2.5} 2043 CB6841_redo III 6331622 1 A C 25 1.00 63 10 2 3 5 @CCc,. point 0 nongenic,nongenic,nongenic -51 upstream,-53 upstream,-7443 upstream {C56G2.4.1},{C56G2.4.3},{C56G2.5} 2044 CB6841_redo III 6331623 1 T A 11 1.00 63 24 2 3 5 @AAa,. point 0 nongenic,nongenic,nongenic -50 upstream,-52 upstream,-7444 upstream {C56G2.4.1},{C56G2.4.3},{C56G2.5} 2046 CB6841_redo III 6363161 1 T C 35 1.00 63 62 3 6 9 @,.,CcCCcC point 0 five_prime_UTR none {C56G2.1b} 2047 CB6841_redo III 6371224 1 A G 255 1.00 63 62 0 32 32 @GggggGGGggGGgggGggggGgGgGGgggGgg point 0 missense,SNP GAT->GGT[Asp->Gly],none {C16A3.8},{haw43559} 2048 CB6841_redo III 6428922 1 G A 78 1.00 63 62 2 8 10 @AAaaaAaa,. point 0 SNP none {haw43564} 2051 CB6841_redo III 6619216 1 C T 255 1.00 63 62 0 33 33 @tttTTtTtTtTTtTTTTTTTtTTTttTttTtTT point 0 missense,SNP CTC->TTC[Leu->Phe],none {Y40D12A.1a},{haw43601} 2055 CB6841_redo III 6626315 1 G C 111 2.00 63 62 0 4 4 @CccC point 0 nongenic,nongenic -1403 upstream,-2629 upstream {C13B9.3},{C13B9.1.1,C13B9.1.2} 2056 CB6841_redo III 6639098 1 C T 255 1.00 63 62 0 28 28 @TtTTttttTTTTTttttttTTTtttttT point 0 nongenic,nongenic,nongenic,nongenic -312 upstream,5078 into,5721 into,6319 into {C13B9.4b.2},{C13B9.4c.2},{C13B9.4a.2},{C13B9.4a.1,C13B9.4b.1,C13B9.4c.1} 2060 CB6841_redo III 6701834 1 A C 6 1.00 63 56 2 2 4 @.,Cc point 0 nongenic,nongenic,nongenic -36520 upstream,1886 into,2080 into {M01G4.1},{F37A4.7a.1,F37A4.7a.2,F37A4.7b,F37A4.7c},{F37A4.7d} 2061 CB6841_redo III 6710989 1 A C 25 1.00 63 62 3 4 7 @CcCC.,. point 0 nongenic,nongenic -891 upstream,-994 upstream {F37A4.5},{F37A4.8} 2063 CB6841_redo III 6760062 1 C T 255 1.00 63 62 0 38 38 @tttTTTTTTTttTtTTTTTTtttTtTTTTTtttttTTt point 0 missense CCC->TCC[Pro->Ser] {K07E12.1a.1,K07E12.1a.2,K07E12.1b} 2064 CB6841_redo III 6815691 1 C T 255 1.00 63 62 0 20 20 @tttTtttTTtttTTTtTTTt point 0 missense CGT->TGT[Arg->Cys] {F28F5.3a,F28F5.3b,F28F5.3c} 2066 CB6841_redo III 6923579 1 G A 255 1.00 63 62 0 15 15 @aAAAAAAAaAAAAaa point 0 SNP none {haw43734} 2067 CB6841_redo III 6924663 1 C T 255 1.00 63 62 0 21 21 @ttTtTttttTTtttttTtttt point 0 missense ATG->ATA[Met->Ile] {F57B9.7a,F57B9.7b} 2070 CB6841_redo III 6990359 1 T G 62 1.00 63 8 3 6 9 @GgGGGg,,, point 0 nongenic,nongenic,nongenic,splice_donor -6056 upstream,180 into,254 into,none {C06E8.3a},{C06E8.3c},{C06E8.3b},{C06E8.3b} 2071 CB6841_redo III 6990361 1 G T 9 1.00 63 62 3 4 7 @TTTt,,, point 0 nongenic,nongenic,nongenic -6054 upstream,182 into,256 into {C06E8.3a},{C06E8.3c},{C06E8.3b} 5630 CB6841_redo III 7013024 0 X X -1000 -999.99 -1000 -1000 2 -1 1 @..aaa indel 0 nongenic,nongenic -3944 downstream,-7726 upstream {F11H8.2},{C06E8.5} 2072 CB6841_redo III 7013479 1 G A 255 1.00 63 62 0 22 22 @AAAAaaAAaAaAAAaaAAAaAA point 0 nongenic,nongenic -8181 upstream,4400 into {C06E8.5},{F11H8.2} 2074 CB6841_redo III 7028423 1 T A 235 1.00 63 62 0 12 12 @aaaaaAAaaaaa point 0 missense,SNP ACA->TCA[Thr->Ser],none {F11H8.4a,F11H8.4b},{haw43822} 2075 CB6841_redo III 7028623 1 A T 220 1.00 63 62 0 9 9 @TttTtTTTT point 0 SNP none {haw43823} 2076 CB6841_redo III 7028658 1 C T 210 1.00 63 62 0 11 11 @TTTTTTTtTTT point 0 missense,SNP GAA->AAA[Glu->Lys],none {F11H8.4a,F11H8.4b},{haw43824} 2077 CB6841_redo III 7033325 1 T G 255 1.00 63 62 0 25 25 @ggGGgGgggggGGGgGGGGgGgggG point 0 nongenic -4195 upstream {F11H8.4a,F11H8.4b} 2078 CB6841_redo III 7063382 1 T C 41 1.00 63 0 0 6 6 @CCcCCC point 0 nongenic,nongenic 257 downstream,787 into {R01H2.1},{R01H2.4} 2082 CB6841_redo III 7118005 1 G A 255 1.00 63 62 0 21 21 @AAAAAAaAaAaaaAAaaaAaA point 0 SNP none {haw43886} 2083 CB6841_redo III 7214104 1 A C 255 1.00 63 62 0 27 27 @CCCCcCCcCccCccccCcccccCcCCc point 0 missense AGC->CGC[Ser->Arg] {R151.2a,R151.2b.1,R151.2b.2,R151.2b.3,R151.2b.4,R151.2b.5,R151.2c,R151.2d.1,R151.2d.2} 2084 CB6841_redo III 7235776 1 C G 12 2.50 1 2 0 4 4 @GGGG point 0 nongenic,nongenic -1645 upstream,-3178 upstream {T20H4.5},{T20H4.3a,T20H4.3b} 2085 CB6841_redo III 7235778 1 G C 3 3.38 1 0 1 4 5 @CCCC. point 0 nongenic,nongenic -1647 upstream,-3176 upstream {T20H4.5},{T20H4.3a,T20H4.3b} 2092 CB6841_redo III 7253849 1 T C 75 1.00 63 62 2 5 7 @cCCcc., point 0 nongenic,nongenic -5089 upstream,-6136 upstream {B0361.4},{T21D11.1} 2093 CB6841_redo III 7272186 1 A G 20 1.00 63 44 1 3 4 @Ggg. point 0 SNP none {uCE3-1001} 2096 CB6841_redo III 7363303 1 T G 5 2.00 0 24 7 19 26 @G,gG,G.gGgGggGG,gG,,gGggG, point 0 missense TAC->TCC[Tyr->Ser] {F08F8.5} 2098 CB6841_redo III 7364354 1 T C 4 2.00 0 22 10 21 31 @cCc,,C,ccc.c,,.CCccCc,cC,ccC,CC point 0 nongenic,nongenic -176 upstream,-965 upstream {F08F8.1},{F08F8.5} 2099 CB6841_redo III 7364394 1 A C 3 2.00 0 24 9 17 26 @C,ccC,CCCc,,ccC.cc.CcC.C.. point 0 nongenic,nongenic -1005 upstream,-136 upstream {F08F8.5},{F08F8.1} 2100 CB6841_redo III 7378610 1 C T 255 1.00 63 62 0 32 32 @tTtTtttTTtTTtttTTttttTttTTtTttTt point 0 missense CGT->CAT[Arg->His] {T20B12.7.1,T20B12.7.2} 2101 CB6841_redo III 7389296 1 G T 38 1.00 63 14 3 5 8 @TTTTt,,, point 0 nongenic 1765 into {T20B12.1} 2102 CB6841_redo III 7389297 1 A G 15 1.00 63 38 4 5 9 @GGGGg,,,, point 0 nongenic 1764 into {T20B12.1} 5636 CB6841_redo III 7494921 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,.ccccCc indel 0 nongenic,nongenic -5921 upstream,322 downstream {K07D8.1},{C07H6.5.1} 5637 CB6841_redo III 7528175 0 X X -1000 -999.99 -1000 -1000 2 -1 1 @,,TTt indel 0 nongenic,nongenic 417 downstream,420 downstream {C07H6.7.2},{C07H6.7.1} 2149 CB6841_redo III 7539941 1 A T 116 1.00 63 62 1 5 6 @TtTTt. point 0 nongenic,nongenic -15641 upstream,-3384 upstream {R13A5.5},{C07H6.7.2} 5639 CB6841_redo III 7587395 0 X X -1000 -999.99 -1000 -1000 1 1 2 @,aa indel 0 nongenic,nongenic,nongenic,nongenic -2784 downstream,-3134 downstream,-3267 downstream,-4493 upstream {R13A5.1a.2,R13A5.1b,R13A5.1d},{R13A5.1a.1},{R13A5.1c},{R13A5.10} 5640 CB6841_redo III 7587556 0 X X -1000 -999.99 -1000 -1000 1 2 3 @,TT indel 0 nongenic,nongenic,nongenic,nongenic -2945 downstream,-3295 downstream,-3428 downstream,-4654 upstream {R13A5.1a.2,R13A5.1b,R13A5.1d},{R13A5.1a.1},{R13A5.1c},{R13A5.10} 2150 CB6841_redo III 7588318 1 A G 255 1.00 63 62 0 32 32 @gGgGggGGGGgGGGGggGGgggggGGgggGGG point 0 SNP none {haw44283} 2161 CB6841_redo III 7608528 1 T C 5 1.00 63 56 2 2 4 @CC,. point 0 missense AAG->AGG[Lys->Arg] {T04A6.3} 2162 CB6841_redo III 7643354 1 T A 255 1.00 63 62 0 19 19 @AaaAaAAAAaaAAaAAAAa point 0 SNP none {haw44321} 2166 CB6841_redo III 7646017 1 T C 15 1.81 63 8 1 6 7 @CCCcCC. point 0 nongenic,nongenic -2986 upstream,85 downstream {ZK783.2.1},{ZK783.5} 5642 CB6841_redo III 7712933 1 X X -1000 -999.99 -1000 -1000 3 -2 1 @,.. indel -1 SNP none {uCE3-1027} 2170 CB6841_redo III 7874570 1 C A 12 1.00 63 34 3 5 8 @..,AaaaA point 0 nongenic 864 into {C02C2.1} 2173 CB6841_redo III 7924181 1 C T 255 1.00 63 62 0 19 19 @tttttTttttttTttTTTt point 0 SNP none {haw44542} 2174 CB6841_redo III 7958663 1 C T 255 1.06 63 62 0 22 22 @TttttTTttTTttTtttTttTt point 0 SNP none {haw44573} 2175 CB6841_redo III 8029612 1 T A 17 1.00 63 54 0 4 4 @AAaG point 0 nongenic,nongenic -34 upstream,219 downstream {F44B9.8},{F44B9.9} 5645 CB6841_redo III 8053797 0 X X -1000 -999.99 -1000 -1000 2 1 3 @..TTt indel 0 nongenic,nongenic -13419 upstream,-2715 upstream {K12H4.1},{K12H4.7b} 2176 CB6841_redo III 8064604 1 C T 255 1.00 63 62 0 29 29 @tTTtTTtttTTtTtttttttTTTtttttt point 0 SNP none {haw44619,snp_K12H4[1]} 5646 CB6841_redo III 8068401 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @,...Gg indel 0 inframe none {K12H4.1} 2177 CB6841_redo III 8099902 1 C T 255 1.00 63 62 0 26 26 @tTtttTtTTttTtTtTTTTtTTTTtT point 0 silent CTA->TTA[Leu->Leu] {K06H7.1} 2178 CB6841_redo III 8124694 1 G A 255 1.00 63 62 0 38 38 @AAAaAaaaAAaaAaaAaaAaaaaAaAaaAAaaaaAAAa point 0 SNP none {haw44646} 2180 CB6841_redo III 8130396 1 G A 255 1.00 63 62 0 18 18 @AaaAAAaAAaAaaaaaAa point 0 SNP none {haw44651} 2182 CB6841_redo III 8154517 1 T A 255 1.00 63 62 0 20 20 @aAaAAAAAAAaaAaAaaAaA point 0 SNP none {haw44660} 2193 CB6841_redo III 8201331 1 T C 23 1.00 63 56 2 4 6 @ccCC,. point 0 nongenic,nongenic -1678 upstream,-204 upstream {C30A5.5},{C50C3.9a} 2195 CB6841_redo III 8336683 1 G C 3 8.25 0 2 4 8 12 @CC.C.CC.C.CC point 0 nongenic,nongenic -2531 upstream,738 downstream {ZC262.4},{ZC262.9} 2196 CB6841_redo III 8336685 1 G C 3 8.25 0 2 5 7 12 @CC.C.,C.C.CC point 0 nongenic,nongenic -2533 upstream,736 downstream {ZC262.4},{ZC262.9} 2198 CB6841_redo III 8336690 1 A G 3 8.19 0 0 3 7 10 @.C.CC,gggg point 0 nongenic,nongenic -2538 upstream,731 downstream {ZC262.4},{ZC262.9} 2199 CB6841_redo III 8336693 1 C G 3 2.00 0 2 2 6 8 @G,,ggggg point 0 nongenic,nongenic -2541 upstream,728 downstream {ZC262.4},{ZC262.9} 2200 CB6841_redo III 8336695 1 C G 4 2.00 0 2 1 8 9 @GG,tgggtt point 0 nongenic,nongenic -2543 upstream,726 downstream {ZC262.4},{ZC262.9} 2202 CB6841_redo III 8344885 1 A G 3 8.81 0 0 5 10 15 @C..,.CCggggggg, point 0 nongenic,nongenic -630 upstream,731 downstream {ZC262.7},{ZC262.10} 2203 CB6841_redo III 8344888 1 C G 3 3.81 0 0 7 11 18 @G.GG.gggggg,.g.g.. point 0 nongenic,nongenic -633 upstream,728 downstream {ZC262.7},{ZC262.10} 2204 CB6841_redo III 8344890 1 C G 3 2.00 0 0 4 14 18 @ggtgggg,.g.ggt,ggg point 0 nongenic,nongenic -635 upstream,726 downstream {ZC262.7},{ZC262.10} 2205 CB6841_redo III 8424571 1 T C 235 8.69 63 62 0 14 14 @CCCccCCCCCCccC point 0 nongenic -1683 upstream {ZK1236.2} 2206 CB6841_redo III 8433741 1 C A 42 1.00 63 4 1 3 4 @AaA, point 0 nongenic -431 upstream {ZK1236.9} 2207 CB6841_redo III 8433743 1 A C 5 1.50 63 28 2 2 4 @cC,, point 0 nongenic -433 upstream {ZK1236.9} 2208 CB6841_redo III 8433818 1 G C 3 1.00 63 0 1 3 4 @C,Cc point 0 nongenic -508 upstream {ZK1236.9} 2209 CB6841_redo III 8433819 1 A C 3 1.00 63 0 0 4 4 @CGCc point 0 nongenic -509 upstream {ZK1236.9} 161914 CB6841_redo III 8442001 134 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered,uncovered non-exonic, 1386 to 1520 bp into,non-exonic, 1389 to 1523 bp into,non-exonic, 1391 to 1525 bp into {ZK1236.7.2},{ZK1236.7.3},{ZK1236.7.1} 2220 CB6841_redo III 8456621 1 T G 16 1.00 63 62 2 4 6 @GGgG,. point 0 nongenic -13971 upstream {F42H10.5} 2221 CB6841_redo III 8461978 1 C A 255 1.00 63 62 0 25 25 @AaaaAAAaaAaaaaAaAaaaaaaAa point 0 SNP none {haw44763} 2226 CB6841_redo III 8503007 1 A T 255 1.00 63 62 0 18 18 @tttTTTTTTtTTTtttTt point 0 SNP none {haw44793} 5654 CB6841_redo III 8512792 2 X X -1000 -999.99 -1000 -1000 5 -2 3 @,,,,, indel -2 SNP none {snp_C04D8[5]} 2229 CB6841_redo III 8563841 1 T G 139 1.00 63 62 2 8 10 @,.gggGgGgg point 0 nongenic,nongenic -17168 upstream,960 downstream {C06E1.3},{C02D5.1} 2230 CB6841_redo III 8563843 1 G A 166 1.00 63 62 1 9 10 @.aaaAaAaaa point 0 SNP none {haw44858} 2231 CB6841_redo III 8563931 1 G A 255 1.00 63 62 0 14 14 @AaaAAAaAAAAAAA point 0 SNP none {haw44859} 2236 CB6841_redo III 8575624 1 C T 152 1.00 63 62 0 7 7 @tttTtTt point 0 nongenic -5385 upstream {C06E1.3} 2244 CB6841_redo III 8684179 1 T A 255 1.00 63 62 0 19 19 @aaaaaAAaAAaAAaaaAaa point 0 SNP none {haw44984} 2245 CB6841_redo III 8684208 1 C T 255 1.00 63 62 0 21 21 @TtTTtttTttttTTtttTttt point 0 SNP none {haw44985} 2249 CB6841_redo III 8693607 1 G C 194 1.00 63 62 0 9 9 @cccccccCc point 0 missense TGT->TCT[Cys->Ser] {B0303.7a} 2250 CB6841_redo III 8693611 1 G A 194 1.00 63 62 0 9 9 @aaaaaaaAa point 0 silent GGG->GGA[Gly->Gly] {B0303.7a} 161915 CB6841_redo III 8693691 51 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 147 to 198 bp into {B0303.7a} 2253 CB6841_redo III 8693743 1 G T 80 1.00 63 0 0 4 4 @ttTT point 0 nongenic,nongenic,nongenic,nongenic -3135 upstream,200 into,362 downstream,892 downstream {B0303.7b},{B0303.7a},{B0303.4.1},{B0303.4.2} 2254 CB6841_redo III 8693773 1 A T 255 1.00 63 62 0 13 13 @ttTTttTTTTTTT point 0 SNP none {haw44992} 2255 CB6841_redo III 8701737 1 C T 255 1.00 63 62 1 22 23 @,ttTtttTttttttttTTtTTTT point 0 silent,SNP TCC->TCT[Ser->Ser],none {B0303.9},{haw44997} 2256 CB6841_redo III 8704000 1 T A 255 1.00 63 62 0 33 33 @AAaAAaAaAAaaAAaAaaAaAaAAAaAaAaaaa point 0 SNP none {haw44999} 2259 CB6841_redo III 8710708 1 T G 43 1.00 63 62 2 4 6 @,,GGgg point 0 nongenic -689 upstream {B0303.11} 2260 CB6841_redo III 8710964 1 T A 255 1.00 63 62 0 23 23 @aaAAAAaAaAAaaaaaaaAaaAA point 0 SNP none {haw45004} 2261 CB6841_redo III 8711826 1 C T 255 1.00 63 62 0 14 14 @TtTTtTTtttTTtT point 0 SNP none {haw45005} 2262 CB6841_redo III 8711855 1 C A 112 1.00 63 62 0 5 5 @AAAAA point 0 nongenic -1836 upstream {B0303.11} 2263 CB6841_redo III 8712013 1 G A 255 1.25 63 62 0 18 18 @aaAaAAaAaaAAAaaaaa point 0 SNP none {haw45006} 2264 CB6841_redo III 8713033 1 C T 160 1.00 63 62 1 7 8 @,ttTTTtT point 0 nongenic,nongenic -3014 upstream,861 downstream {B0303.11},{B0303.14} 2265 CB6841_redo III 8733582 1 A T 255 1.00 63 62 0 29 29 @TttttttttTtTTtTtttttTTTtttTTt point 0 SNP none {haw45014,uCE3-1086} 2266 CB6841_redo III 8733611 1 A T 255 1.00 63 62 0 23 23 @ttTTTtttTTtTtTttTTttttt point 0 SNP none {haw45015,uCE3-1087} 2268 CB6841_redo III 8740761 1 C T 255 1.00 63 62 0 24 24 @ttTTTttTTTTtTtTTtTTtttTT point 0 SNP none {haw45017} 2269 CB6841_redo III 8741583 1 G C 66 1.00 63 46 0 4 4 @CCCN point 0 nongenic,nongenic,nongenic -262 upstream,-264 upstream,330 downstream {ZK370.5.1},{ZK370.5.2},{ZK370.6} 2270 CB6841_redo III 8741584 1 C G 46 1.00 63 52 2 3 5 @GGG,, point 0 nongenic,nongenic,nongenic -263 upstream,-265 upstream,329 downstream {ZK370.5.1},{ZK370.5.2},{ZK370.6} 2271 CB6841_redo III 8742380 1 G A 255 1.00 63 62 0 20 20 @aaAAAAAAAAaAaaAaaAaA point 0 SNP,three_prime_UTR none,none {haw45020},{ZK370.6} 2272 CB6841_redo III 8744441 1 C T 255 1.00 63 62 0 23 23 @TtttTttTTttttttTtTTTTtt point 0 SNP none {haw45021} 2273 CB6841_redo III 8752722 1 C T 255 1.00 63 62 0 21 21 @tTttttTTTTTtTTttTTttt point 0 SNP none {haw45024} 2274 CB6841_redo III 8758065 1 T C 255 1.00 63 62 0 14 14 @ccCcCCccCcCCCc point 0 SNP none {haw45027} 2284 CB6841_redo III 8929471 1 A T 26 1.00 63 62 1 4 5 @Tttt, point 0 nongenic,nongenic -2592 upstream,-3033 upstream {ZK643.1},{ZK643.7} 2287 CB6841_redo III 9002048 1 C T 255 1.00 63 62 0 22 22 @TTtTTTtttttTTTTgttTtTT point 0 missense CGA->CAA[Arg->Gln] {F59B2.15} 2288 CB6841_redo III 9013698 1 T G 16 7.69 63 30 2 4 6 @,.gGGG point 0 nongenic,nongenic,nongenic -1419 upstream,-3818 upstream,786 into {F59B2.9},{F59B2.12},{F59B2.11} 2289 CB6841_redo III 9025485 1 A T 255 1.00 63 62 0 19 19 @TTtttTTTTTtTTTttTtT point 0 SNP none {haw45122} 2291 CB6841_redo III 9037541 1 C T 255 1.00 63 62 0 22 22 @ttTttttttttTtTttTTtttt point 0 nongenic -10587 upstream {F59B2.13} 2292 CB6841_redo III 9066055 1 C G 255 1.00 63 62 0 19 19 @GgGGgGgggggGgGgGGGg point 0 nongenic 5616 into {R107.8} 2293 CB6841_redo III 9066056 1 G C 255 1.00 63 62 0 19 19 @CcCCcCcccccCcCcCCCc point 0 nongenic 5615 into {R107.8} 2294 CB6841_redo III 9101165 1 G T 83 0.00 63 62 0 7 7 @ttttttt point 0 missense CAA->AAA[Gln->Lys] {ZK507.1} 2295 CB6841_redo III 9101166 1 C T 83 0.00 63 62 0 7 7 @ttttttt point 0 non_start ATG->ATA[Met->Ile] {ZK507.1} 2303 CB6841_redo III 9164103 1 C T 255 1.00 63 62 0 22 22 @tTTTTTTttTttTTtTTTtTtT point 0 nongenic,nongenic -2540 upstream,1118 into {F54G8.5},{F54G8.2} 2306 CB6841_redo III 9263153 1 G A 255 1.00 63 62 0 17 17 @AAAAaaaAaaaaaAaaa point 0 SNP none {haw45230} 2307 CB6841_redo III 9264263 1 G A 255 1.00 63 62 0 24 24 @aAaaAAaaaaaAAaaaaaAAAaaA point 0 SNP none {haw45233} 2310 CB6841_redo III 9286393 1 C T 255 1.00 63 62 0 19 19 @tttTttTTttttTtTTTtt point 0 nongenic,nongenic -17424 upstream,439 into {M01A8.2a,M01A8.2b},{K01B6.1} 2311 CB6841_redo III 9298564 1 C T 255 1.00 63 62 0 22 22 @TTttttTttTtttTTTttTTTT point 0 SNP none {haw45256} 2312 CB6841_redo III 9341369 1 T C 255 1.00 63 62 0 28 28 @CcccCCcccccCcCCccCccCCCccCCc point 0 missense,SNP AGA->GGA[Arg->Gly],none {K04H4.1a},{haw45266} 2313 CB6841_redo III 9348777 1 A G 20 1.00 63 62 4 6 10 @.,..GgGgGG point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -11391 upstream,-4427 upstream,1103 into,1122 into,1124 into,1162 into,690 into {K04H4.5},{K04H4.1a,K04H4.1b},{K04H4.2c.2},{K04H4.2a.1},{K04H4.2c.1},{K04H4.2a.2},{K04H4.2a.3,K04H4.2b} 2314 CB6841_redo III 9350628 1 C T 255 1.00 63 62 0 18 18 @TTtTTtTTttTTtttTTt point 0 missense,SNP GGA->GAA[Gly->Glu],none {K04H4.2c.1,K04H4.2c.2},{haw45273} 2315 CB6841_redo III 9350653 1 C T 255 1.00 63 62 0 18 18 @tttTTtTTTttttttttt point 0 missense,SNP GAG->AAG[Glu->Lys],none {K04H4.2c.1,K04H4.2c.2},{haw45274} 2316 CB6841_redo III 9350660 1 C T 255 1.00 63 62 0 14 14 @tTTTtttttttttT point 0 silent,SNP AGG->AGA[Arg->Arg],none {K04H4.2c.1,K04H4.2c.2},{haw45275} 2317 CB6841_redo III 9352561 1 C T 255 1.00 63 62 0 30 30 @TtTtttttTTTTtttTtTTtTTTTtTtTTt point 0 silent,SNP GAG->GAA[Glu->Glu],none {K04H4.2c.1,K04H4.2c.2},{haw45277} 2318 CB6841_redo III 9355598 1 A C 255 1.00 63 62 0 30 30 @CCCCcCcCCCCCCccCCCcccccccccCcc point 0 nongenic,nongenic,nongenic -216 upstream,-234 upstream,-4570 upstream {K04H4.2a.1,K04H4.2a.2},{K04H4.2a.3,K04H4.2b,K04H4.2c.1,K04H4.2c.2},{K04H4.5} 2319 CB6841_redo III 9355599 1 C G 255 1.00 63 62 0 31 31 @GGGGgGgGGGGGGggGGGgggggggggGggg point 0 nongenic,nongenic,nongenic -217 upstream,-235 upstream,-4569 upstream {K04H4.2a.1,K04H4.2a.2},{K04H4.2a.3,K04H4.2b,K04H4.2c.1,K04H4.2c.2},{K04H4.5} 2321 CB6841_redo III 9383872 1 C T 255 1.00 63 62 0 30 30 @tTTTttTTtTTTtTTtTTTtTtTttTTTTT point 0 nongenic 200 downstream {C38C10.3} 2322 CB6841_redo III 9409056 1 T G 147 2.06 63 62 0 15 15 @GGGGGGGGggGgggG point 0 nongenic -2513 upstream {T26G10.1} 2323 CB6841_redo III 9409292 1 C G 218 1.75 63 62 0 18 18 @ggggggggggggGggggg point 0 nongenic -2749 upstream {T26G10.1} 2326 CB6841_redo III 9448445 1 C G 255 1.00 63 62 0 27 27 @GgGggGGgggggGggggGGGggGgGGg point 0 SNP none {haw45304} 2327 CB6841_redo III 9449797 1 C T 255 1.00 63 62 0 26 26 @tttttTttttttttTtTtttTTttTT point 0 SNP none {haw45305} 2328 CB6841_redo III 9450593 1 C A 255 1.00 63 62 0 21 21 @aAaAaaAaaAaAAaaaaaaaA point 0 SNP none {haw45306} 2329 CB6841_redo III 9451505 1 G C 255 1.00 63 62 0 21 21 @CccccCCCCccccCCcCcccc point 0 SNP,three_prime_UTR none,none {haw45307},{F54C8.7a} 2330 CB6841_redo III 9452439 1 G T 255 1.00 63 62 0 18 18 @TtTttTttTttTtttttT point 0 SNP none {haw45308,snp_F54C8[1]} 5668 CB6841_redo III 9463253 0 X X -1000 -999.99 -1000 -1000 5 -1 4 @..,,,AaAA indel 0 nongenic,nongenic,nongenic,nongenic,nongenic -231 downstream,-2421 upstream,-363 downstream,364 downstream,391 downstream {B0464.6.2,B0464.6.3},{B0464.9},{B0464.6.1},{B0464.5b.1},{B0464.5c.1,B0464.5c.2} 2331 CB6841_redo III 9479166 1 G A 255 1.00 63 62 0 19 19 @aaAAaAAAAaAAAAAAAAA point 0 SNP none {haw45312} 2332 CB6841_redo III 9517134 1 C T 255 1.00 63 62 0 27 27 @TtTTttTTtttTTttTtttTTTTtTtt point 0 three_prime_UTR none {F55H2.6.1} 2333 CB6841_redo III 9536357 1 C T 255 1.00 63 62 0 20 20 @tTttTtTTtTTTTTTTTtTT point 0 missense GAG->AAG[Glu->Lys] {ZK1098.3} 161916 CB6841_redo III 9571111 150 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered non-exonic, 7760 to 7910 bp into,non-exonic, 8513 to 8663 bp into {C48B4.4a,C48B4.4b,C48B4.4c},{C48B4.4d} 2335 CB6841_redo III 9571278 1 C T 77 0.00 63 52 0 4 4 @TTTT point 0 nongenic,nongenic 691 into,985 into {C48B4.4a,C48B4.4c,C48B4.4d},{C48B4.4b} 2336 CB6841_redo III 9571279 1 G C 77 0.00 63 52 0 4 4 @CCCC point 0 nongenic,nongenic 692 into,986 into {C48B4.4a,C48B4.4c,C48B4.4d},{C48B4.4b} 2340 CB6841_redo III 9583725 1 A T 255 1.00 63 62 0 18 18 @ttTTTttTTTTTTTTtTT point 0 SNP none {haw45342} 2341 CB6841_redo III 9637545 1 A G 85 1.00 63 34 0 4 4 @GgGC point 0 nongenic -527 upstream {F58A4.11} 5672 CB6841_redo III 9639398 3 X X -1000 -999.99 -1000 -1000 6 -4 2 @.,.,,. indel -3 SNP none {snp_C15H7[2]} 2345 CB6841_redo III 9643534 1 C G 255 1.00 63 62 0 24 24 @GGggGGGGGGgGggGggGggGggG point 0 SNP none {uCE3-1110} 2346 CB6841_redo III 9643535 1 G C 255 1.00 63 62 0 23 23 @CccCCCCCCcCccCccCccCccC point 0 SNP none {uCE3-1111} 2349 CB6841_redo III 9754430 1 C A 255 1.00 63 62 0 23 23 @AAAaAAAAaAaAAaaAaaAAAaa point 0 missense,SNP GAG->GAT[Glu->Asp],none {T05G5.8.1,T05G5.8.2},{haw45405} 2352 CB6841_redo III 9796154 1 T C 255 1.00 63 62 0 33 33 @ccccccCcccCcCcCCCCcCcCcCcCccCCccc point 0 SNP none {haw45434} 2356 CB6841_redo III 9853804 1 T G 23 1.19 63 20 1 4 5 @gGGG. point 0 nongenic,nongenic,nongenic 170 downstream,397 downstream,83 downstream {K11H3.1b},{K11H3.1a,K11H3.1c.1,K11H3.1c.2,K11H3.1d.1,K11H3.1d.2},{K11H3.3} 2358 CB6841_redo III 9870315 1 T G 5 1.00 63 34 2 2 4 @,,gG point 0 nongenic,nongenic -2630 upstream,692 into {ZK757.4a,ZK757.4c},{ZK757.1} 2360 CB6841_redo III 9913766 1 C A 255 1.06 63 62 0 34 34 @aaaAaAaAAaaaaAaAAAAAAaaAAAAaaaAaAA point 0 nongenic,nongenic,nongenic -3211 upstream,-390 upstream,-670 upstream {F40F12.5},{F40F12.7.1,F40F12.7.2},{F40F12.7.3} 2361 CB6841_redo III 9918742 1 C G 255 1.00 63 62 0 26 26 @GGGGGGGGgGGGGGgGggGgGggGGg point 0 silent GGG->GGC[Gly->Gly] {F40F12.3} 2362 CB6841_redo III 9920715 1 G T 255 1.00 63 62 0 14 14 @ttTTtTttttttTt point 0 SNP none {haw45505} 2363 CB6841_redo III 9920824 1 C T 10 1.00 63 62 2 3 5 @,,TTt point 0 SNP none {haw45506} 2364 CB6841_redo III 9920856 1 G T 245 1.00 63 62 0 11 11 @TTttttttTtt point 0 SNP none {haw45507} 2365 CB6841_redo III 9938706 1 T C 57 4.50 63 6 14 33 47 @CccCcCC.cccCCcc.cccCcCcCccCcCCCc.cc.c,.....,.., point 0 nongenic 902 into {K03H1.5} 2367 CB6841_redo III 9942889 1 T A 255 1.00 63 62 0 22 22 @AaAaAaaAaaaaaAAAaAaAaa point 0 SNP none {haw45518} 2368 CB6841_redo III 9956571 1 A C 248 1.00 63 62 0 20 20 @cccCcCGCcCcCCcccCCcc point 0 nongenic,nongenic,nongenic -458 upstream,-682 upstream,-683 upstream {K03H1.2.1,K03H1.2.2},{R10E12.1a},{R10E12.1b,R10E12.1c,R10E12.1d} 5680 CB6841_redo III 10004045 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @..,,gg indel 0 nongenic -363 upstream {C05B5.11} 2371 CB6841_redo III 10016572 1 A G 255 1.00 63 62 0 35 35 @GgggGgGgGGgGggGgGGGGGGGGGGGgGGgGGGG point 0 SNP none {haw45557} 2372 CB6841_redo III 10019613 1 C A 23 1.00 63 62 2 3 5 @aaa., point 0 nongenic,nongenic -3159 upstream,-4086 upstream {C05B5.7},{M04D8.1} 2373 CB6841_redo III 10019932 1 G T 255 1.00 63 62 0 33 33 @TTttTttTttTTttttTttTTtttttTtTTTtt point 0 SNP none {haw45564} 2374 CB6841_redo III 10030883 1 C G 13 1.00 63 36 1 3 4 @gGG. point 0 missense GAG->GAC[Glu->Asp] {M04D8.4} 2375 CB6841_redo III 10031246 1 G T 21 1.00 63 18 4 5 9 @.,.,TTTTt point 0 SNP none {uCE3-1131} 2376 CB6841_redo III 10035095 1 G T 255 1.00 63 62 0 16 16 @TttttTTTtTTttTTt point 0 SNP none {haw45579} 2379 CB6841_redo III 10035139 1 C T 123 1.00 63 62 0 4 4 @tTTt point 0 nongenic,nongenic -758 upstream,142 downstream {M04D8.6},{M04D8.8} 2380 CB6841_redo III 10035170 1 C T 255 1.31 63 62 0 16 16 @TTtTttTTttTttTtt point 0 nongenic,nongenic -727 upstream,173 downstream {M04D8.6},{M04D8.8} 2381 CB6841_redo III 10035184 1 A T 255 3.38 63 62 0 19 19 @TttTTttTttTttttTttt point 0 nongenic,nongenic -713 upstream,187 downstream {M04D8.6},{M04D8.8} 2382 CB6841_redo III 10035309 1 G T 255 1.00 63 62 0 23 23 @TTTtTttTTTTtTttTtTTTTTT point 0 SNP none {haw45580} 2383 CB6841_redo III 10035384 1 G A 255 1.00 63 62 0 25 25 @aaaaaAaAAAaaAAaAaaaAaaaAa point 0 SNP none {haw45581} 2384 CB6841_redo III 10035425 1 C A 255 1.44 63 62 0 26 26 @AaaaAaAAAaaAAaAAaAAaaAaAAA point 0 nongenic,nongenic -472 upstream,428 downstream {M04D8.6},{M04D8.8} 2385 CB6841_redo III 10036023 1 G A 255 1.00 63 62 0 32 32 @AAaAAaAaAAAAAAAaAAAaaAaaaAaAaAAA point 0 SNP none {haw45582} 161917 CB6841_redo III 10100794 55 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 629 to 684 bp into {T16H12.6} 2391 CB6841_redo III 10101060 1 A G 29 1.00 63 54 2 4 6 @..GGGg point 0 nongenic,nongenic -3085 upstream,418 into {T16H12.5b.1},{T16H12.6} 2392 CB6841_redo III 10101063 1 C G 55 1.00 63 28 1 4 5 @.GGGg point 0 SNP none {uCE3-1141} 2398 CB6841_redo III 10130584 1 C T 114 1.00 63 62 0 6 6 @ttttTt point 0 nongenic,nongenic,nongenic -6381 upstream,1534 into,2035 into {ZK1128.7},{ZK1128.6b.1,ZK1128.6b.2},{ZK1128.6a} 2403 CB6841_redo III 10147954 1 T G 108 1.00 63 34 0 4 4 @GGGG point 0 nongenic -4734 upstream {K08E5.2a,K08E5.2b.2,K08E5.2b.3} 2404 CB6841_redo III 10148031 1 C G 171 1.25 63 62 0 8 8 @gGgGggGg point 0 nongenic -4657 upstream {K08E5.2a,K08E5.2b.2,K08E5.2b.3} 5683 CB6841_redo III 10213728 1 X X -1000 -999.99 -1000 -1000 6 -3 3 @,,,,,, indel -1 SNP none {uCE3-1145} 2422 CB6841_redo III 10247342 1 A T 255 1.00 63 62 0 22 22 @TTTttTTTtTtTTttTTtTtTt point 0 silent ACT->ACA[Thr->Thr] {R01H10.1} 2423 CB6841_redo III 10277507 1 C T 255 1.00 63 62 0 25 25 @ttTTTTTTTttttTTtTttTttTtt point 0 nongenic,nongenic,nongenic -10231 upstream,-1515 upstream,967 into {R01H10.7},{K10G9.3},{R01H10.8} 2426 CB6841_redo III 10287323 1 C T 255 1.00 63 62 0 13 13 @tttTttTTttTTt point 0 SNP none {haw45760} 5685 CB6841_redo III 10289001 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @..,.cc indel 0 nongenic,nongenic -6027 upstream,495 downstream {K10G9.1},{K10G9.2} 2427 CB6841_redo III 10289344 1 G C 255 1.00 63 62 0 21 21 @cccCcCcCcCCccCCcccCCc point 0 SNP none {haw45764} 2428 CB6841_redo III 10291745 1 C A 163 1.00 63 62 1 9 10 @AaAAaAaaa. point 0 nongenic -3282 upstream {K10G9.1} 2429 CB6841_redo III 10291756 1 T A 186 1.00 63 62 0 8 8 @aaAaaAaa point 0 nongenic -3271 upstream {K10G9.1} 2430 CB6841_redo III 10311889 1 G A 255 1.00 63 62 0 25 25 @aaAaAAAAAaaaaaAAAAaaAAAAa point 0 nongenic -439 upstream {T07A5.7} 2433 CB6841_redo III 10354930 1 A T 255 1.00 63 62 0 23 23 @tTTTtttTtTtTtttttTTttTT point 0 SNP,three_prime_UTR none,none {haw45800},{T07C4.3b} 2436 CB6841_redo III 10361911 1 T G 255 1.00 63 62 0 15 15 @GgGgggGgGGggggG point 0 SNP none {haw45805} 2437 CB6841_redo III 10368133 1 G A 255 1.00 63 62 0 20 20 @AAAAaAaAaaAaAAAaaaAA point 0 SNP none {haw45808} 2438 CB6841_redo III 10368773 1 C G 255 1.00 63 62 0 17 17 @gggggGgGggGGGgggg point 0 silent,SNP TCC->TCG[Ser->Ser],none {C38H2.1},{haw45810} 2442 CB6841_redo III 10377649 1 G C 27 1.00 63 0 0 4 4 @CCCC point 0 nongenic -4014 upstream {C38H2.2} 2448 CB6841_redo III 10385217 1 C T 63 1.00 63 52 1 3 4 @Ttt, point 0 SNP none {haw45831} 2449 CB6841_redo III 10388877 1 A T 30 1.00 63 62 2 4 6 @TTTT.. point 0 nongenic -2413 upstream {C38H2.3} 5689 CB6841_redo III 10397838 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @...gGg indel 0 nongenic -1872 upstream {M03C11.1} 2450 CB6841_redo III 10399084 1 C A 255 1.00 63 62 0 35 35 @aaAAaaaAAaAAaaaaaAAAAaaaaAAaaAAAAaA point 0 SNP none {haw45839} 2454 CB6841_redo III 10454269 1 G A 238 1.31 63 62 0 13 13 @AAAaAaAAAaaAA point 0 SNP none {haw45927} 2455 CB6841_redo III 10482439 1 G A 255 1.00 63 62 0 24 24 @AAAaaAaaAaaAaAAaaAaaaAAa point 0 nongenic,nongenic,nongenic -5576 upstream,226 into,407 downstream {F43D9.1},{D2045.8},{D2045.7} 2456 CB6841_redo III 10483638 1 C A 42 1.00 63 62 1 3 4 @AAa. point 0 missense,SNP CCA->CAA[Pro->Gln],none {D2045.8},{haw45977} 2457 CB6841_redo III 10498007 1 G A 249 1.00 63 62 2 14 16 @,.aaAaAaaAaaAAaa point 0 SNP none {haw45998} 2458 CB6841_redo III 10498115 1 T C 43 1.00 63 4 0 6 6 @ccCccC point 0 silent TTT->TTC[Phe->Phe] {F43D9.1} 2459 CB6841_redo III 10498116 1 C A 31 1.00 63 0 0 4 4 @AaaA point 0 missense CAG->AAG[Gln->Lys] {F43D9.1} 2462 CB6841_redo III 10500602 1 G A 255 1.00 63 62 0 26 26 @aAaAaAaaaaaaAaAAaAaAAaAaAa point 0 silent,SNP TTC->TTT[Phe->Phe],none {F43D9.2},{haw46003} 2463 CB6841_redo III 10500798 1 C T 255 1.00 63 62 0 17 17 @ttTtTTTTTTTTTTTTT point 0 SNP none {haw46004} 2464 CB6841_redo III 10500854 1 C T 255 1.00 63 62 0 22 22 @ttttttTttTTtTtTTTTtTTt point 0 SNP none {haw46006} 2465 CB6841_redo III 10501170 1 C T 232 1.00 63 62 0 12 12 @tTTTTTtTtttt point 0 SNP none {haw46010} 2466 CB6841_redo III 10502428 1 G A 255 1.00 63 62 0 24 24 @aaaAaAaaaAaaaaaaAAaAaAAA point 0 SNP none {haw46016} 2467 CB6841_redo III 10502726 1 C T 255 1.00 63 62 0 17 17 @TtttttTtTttTTttTt point 0 SNP none {haw46017} 2468 CB6841_redo III 10503428 1 G A 255 1.00 63 62 0 23 23 @aaaaAaaAaaAaaaAAaaaaaAa point 0 nongenic,nongenic 311 into,531 downstream {F43D9.2},{F43D9.5} 2469 CB6841_redo III 10512573 1 C T 255 1.00 63 62 0 27 27 @TtTttTTtTtTTTttttTtTtTttTtt point 0 SNP,three_prime_UTR none,none {haw46030},{F43D9.3a} 2470 CB6841_redo III 10512825 1 C T 255 1.00 63 62 0 12 12 @tTtTTTtTTttt point 0 SNP,three_prime_UTR none,none {haw46031},{F43D9.3a} 2471 CB6841_redo III 10513932 1 C T 255 1.00 63 62 0 33 33 @TtTtTTTtTTTTTtTTtTtTtTTTttttTTtTt point 0 SNP none {haw46034} 2472 CB6841_redo III 10514115 1 G A 255 1.00 63 62 0 27 27 @aaaAAaaaaAaaaaaAaAAAaAaaaaA point 0 SNP none {haw46035} 5694 CB6841_redo III 10514381 1 X X -1000 -999.99 -1000 -1000 5 0 5 @..,.. indel -1 SNP none {uCE3-1167} 5695 CB6841_redo III 10515056 0 X X -1000 -999.99 -1000 -1000 3 1 4 @.G,,ccC indel 0 nongenic,nongenic -2808 downstream,-5506 upstream {F43D9.3b},{T21C12.1b} 2476 CB6841_redo III 10520298 1 A C 255 1.00 63 62 0 17 17 @CCCCcCCccccCcccCc point 0 SNP none {haw46040} 2477 CB6841_redo III 10528187 1 G C 255 1.00 63 62 0 26 26 @CcCcCcccccccccccccCcCCCcCc point 0 SNP none {haw46050} 2483 CB6841_redo III 10534165 1 G A 3 1.00 63 18 2 2 4 @,,Aa point 0 nongenic -1246 upstream {T21C12.2} 2485 CB6841_redo III 10540092 1 T G 19 1.00 63 10 1 3 4 @,Ggg point 0 nongenic -1042 upstream {T21C12.3} 5700 CB6841_redo III 10552635 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @.,..ggg indel 0 three_prime_UTR none {T21C12.4b} 2496 CB6841_redo III 10555060 1 A C 3 2.25 63 2 0 4 4 @Ctcc point 0 nongenic,nongenic -1005 upstream,2834 into {T21C12.4a},{T21C12.4b} 2498 CB6841_redo III 10679414 1 T A 255 1.00 63 62 0 30 30 @aAaAAaAaAaaaAAaaaaAAaaAAaaaaaA point 0 nongenic 57 into {Y39A1A.16} 2504 CB6841_redo III 10944996 1 T G 3 1.00 63 0 0 6 6 @CGCggg point 0 nongenic,nongenic -2333 upstream,1388 into {Y52D3.1a.1},{M142.6} 2505 CB6841_redo III 10944997 1 A G 3 1.00 63 0 0 6 6 @GCCggg point 0 nongenic,nongenic -2332 upstream,1387 into {Y52D3.1a.1},{M142.6} 2506 CB6841_redo III 10945002 1 C G 3 1.00 63 0 1 4 5 @,gggg point 0 nongenic,nongenic -2327 upstream,1382 into {Y52D3.1a.1},{M142.6} 2507 CB6841_redo III 11016885 1 T C 229 1.00 63 62 0 15 15 @CCCCCCccccCcCCc point 0 SNP none {haw46705} 2513 CB6841_redo III 11138481 1 G C 12 1.00 63 2 0 4 4 @cccc point 0 nongenic,nongenic 298 into,663 downstream {Y47D3A.2},{Y47D3A.1} 2520 CB6841_redo III 11326567 1 G T 17 1.00 63 2 3 3 6 @TtT.,. point 0 SNP,three_prime_UTR none,none {haw46989},{T28D6.6} 2522 CB6841_redo III 11342775 1 A C 34 1.00 63 62 2 3 5 @Ccc,, point 0 nongenic,nongenic,nongenic,nongenic -406 upstream,217 into,654 downstream,670 downstream {T28D6.9},{T28D6.6},{T28D6.5b},{T28D6.5a.1} 2524 CB6841_redo III 11472333 1 T A 255 1.00 63 62 0 22 22 @aaaaAaaaaaaAaAAAaaaaaa point 0 nongenic -1644 upstream {Y47D3B.9} 2525 CB6841_redo III 11480573 1 G A 255 1.00 63 62 0 24 24 @aAaAaaaaaAAAaAaaAAaAAAAa point 0 SNP none {haw47230} 2526 CB6841_redo III 11486301 1 G C 209 1.00 63 62 0 8 8 @ccCcccCC point 0 SNP none {haw47238} 2527 CB6841_redo III 11504646 1 C A 255 1.00 63 62 0 12 12 @AAaaAaAaAAAa point 0 SNP none {haw47276} 2528 CB6841_redo III 11516787 1 C T 255 1.00 63 62 0 19 19 @TTTTTTtTTTttTTTTttT point 0 SNP none {haw47292} 2536 CB6841_redo III 11543276 1 G A 255 1.00 63 62 0 33 33 @AaaAAAAAaaaaaaaAaaAAaAaAaAaAaAaAa point 0 missense,SNP GGA->GAA[Gly->Glu],none {Y66D12A.14},{haw47330,uCE3-1248} 2537 CB6841_redo III 11562926 1 T G 51 1.00 63 62 2 4 6 @.,GGgG point 0 nongenic,nongenic -486 upstream,387 downstream {Y66D12A.11},{Y66D12A.12} 2538 CB6841_redo III 11576713 1 C G 255 1.00 63 62 0 24 24 @GgGGGgGgGgGggggGGgggGggG point 0 missense,SNP GCA->GGA[Ala->Gly],none {Y66D12A.8},{haw47425} 2540 CB6841_redo III 11682308 1 G T 208 3.31 63 62 0 12 12 @TTTTTTttTttT point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -14263 upstream,11353 into,6764 into,6857 into,6864 into,7764 into {Y41C4A.6},{Y41C4A.4c},{Y41C4A.4b},{Y41C4A.4a},{Y41C4A.4d},{Y41C4A.4e} 2541 CB6841_redo III 11694298 1 C A 140 1.00 63 62 0 7 7 @AAAAAAA point 0 nongenic,nongenic,nongenic -2273 upstream,577 downstream,580 downstream {Y41C4A.6},{Y41C4A.4a},{Y41C4A.4e} 5704 CB6841_redo III 11789548 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @...gt.g indel 2 nongenic,nongenic 207 downstream,871 downstream {C24H11.1},{C24H11.2} 2542 CB6841_redo III 11809758 1 T C 147 1.00 63 62 0 5 5 @ccCCC point 0 nongenic,nongenic -121 upstream,313 downstream {C18D11.6},{C18D11.9} 2543 CB6841_redo III 11861725 1 A T 243 1.00 63 62 0 13 13 @TtTTTTTTttTtT point 0 nongenic,nongenic 408 into,564 downstream {Y56A3A.2},{Y56A3A.4} 2550 CB6841_redo III 11965525 1 T C 3 7.00 0 2 1 5 6 @CCCCg, point 0 nongenic,nongenic -5457 upstream,3690 into {Y56A3A.27.1},{Y56A3A.28} 2552 CB6841_redo III 11967141 1 C G 4 2.69 63 0 3 6 9 @GG...gggg point 0 nongenic,nongenic -7073 upstream,4101 into {Y56A3A.27.1},{Y56A3A.28} 2553 CB6841_redo III 11990793 1 A T 43 1.00 63 62 3 5 8 @TTTtT,., point 0 nongenic,nongenic 744 into,750 into {Y56A3A.32.2},{Y56A3A.32.1} 2556 CB6841_redo III 12008909 1 C G 255 4.75 63 62 0 19 19 @gGggGGgGggggggGgggg point 0 nongenic,nongenic -11521 upstream,-6075 upstream {Y79H2A.1a.1},{Y56A3A.33} 2558 CB6841_redo III 12059646 1 T A 56 1.00 63 62 2 5 7 @,.aaAAA point 0 nongenic,nongenic -1304 upstream,-1975 upstream {Y79H2A.6},{Y79H2A.11} 2559 CB6841_redo III 12060765 1 T A 255 1.00 63 62 0 15 15 @AaaAAaAAAaAAAAa point 0 SNP none {haw48229} 2561 CB6841_redo III 12103249 1 G T 42 1.00 63 0 1 3 4 @ttT. point 0 missense CAC->AAC[His->Asn] {Y75B8A.3} 2565 CB6841_redo III 12144028 1 A G 255 1.00 63 62 0 23 23 @gGggGggGgGgGGGGggGGGGgG point 0 nongenic,nongenic -13806 upstream,-8752 upstream {Y75B8A.6},{Y75B8A.7} 2566 CB6841_redo III 12239827 1 G A 98 5.69 63 62 0 9 9 @AaAaaAaAa point 0 nongenic,nongenic,nongenic 421 downstream,457 downstream,728 downstream {Y75B8A.22.1},{Y75B8A.22.2},{Y75B8A.21} 2572 CB6841_redo III 12511900 1 A G 183 3.56 63 62 0 9 9 @GGGGgggGG point 0 ncRNA none {Y111B2A.5b} 2574 CB6841_redo III 12573264 1 G C 255 1.75 63 62 0 18 18 @CCccCCCcccCCcccCCc point 0 SNP none {haw49035} 2575 CB6841_redo III 12583126 1 A G 255 1.00 63 62 0 16 16 @GgGGggGgggggGGgg point 0 SNP none {haw49061} 2576 CB6841_redo III 12589042 1 T C 255 1.00 63 62 0 28 28 @cccCCcCCccccCCCccCccCcccCCcc point 0 nongenic -13793 upstream {Y111B2A.9a} 2577 CB6841_redo III 12596781 1 T A 252 1.31 63 62 0 16 16 @AAAaAAaaaAAAAaAA point 0 nongenic,nongenic,nongenic,nongenic -21532 upstream,755 into,843 into,880 into {Y111B2A.9a},{Y111B2A.10a,Y111B2A.10b.3},{Y111B2A.10b.2},{Y111B2A.10b.1} 2578 CB6841_redo III 12603549 1 G T 124 1.50 63 62 0 12 12 @tttttttttttt point 0 nongenic,nongenic,nongenic -5056 upstream,-5621 upstream,4364 into {Y111B2A.10b.1},{Y111B2A.12},{Y111B2A.11} 2579 CB6841_redo III 12608700 1 G A 5 1.00 63 8 0 5 5 @AAccc point 0 nongenic,nongenic -350 upstream,-470 upstream {Y111B2A.11},{Y111B2A.12} 2580 CB6841_redo III 12608701 1 A C 9 1.00 63 4 1 5 6 @Ccc.cg point 0 nongenic,nongenic -351 upstream,-469 upstream {Y111B2A.11},{Y111B2A.12} 2581 CB6841_redo III 12617371 1 T C 7 1.00 63 0 1 4 5 @CCg.g point 0 nongenic,nongenic,nongenic -2067 upstream,-9021 upstream,573 into {Y111B2A.28},{Y111B2A.11},{Y111B2A.12} 2583 CB6841_redo III 12636079 1 T C 215 1.00 63 62 0 12 12 @cccCccccccCc point 0 nongenic,nongenic 9623 into,9628 into {Y111B2A.14.2},{Y111B2A.14.1} 161918 CB6841_redo III 12679319 71 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 5760 to 5831 bp into {Y111B2A.17} 2584 CB6841_redo III 12683449 1 A C 255 1.00 63 62 0 27 27 @ccccCccCccCcCcCCCccccCccCcc point 0 SNP none {haw49231} 2591 CB6841_redo III 12725512 1 A T 255 1.31 63 62 0 19 19 @TttTtttttTtTttTTtTt point 0 nongenic,nongenic -20820 upstream,11065 into {Y111B2A.21},{Y111B2A.22} 2601 CB6841_redo III 13032541 1 G C 255 1.12 63 62 0 19 19 @CccCCcCcCcCcCcCCCcC point 0 nongenic,nongenic,nongenic -2994 upstream,-7440 upstream,1740 into {F14F7.4},{F54F12.2a},{F14F7.5} 2602 CB6841_redo III 13032550 1 T C 198 1.38 63 62 0 11 11 @CcCcCcCCCcC point 0 nongenic,nongenic,nongenic -3003 upstream,-7431 upstream,1749 into {F14F7.4},{F54F12.2a},{F14F7.5} 2606 CB6841_redo III 13155781 1 G A 255 1.00 63 62 0 16 16 @aAAaaAAAAAAaaAAa point 0 SNP none {haw49837} 2607 CB6841_redo III 13202983 1 G T 255 4.56 63 62 0 22 22 @TTTtTTTTTtTTtTTTtTTTtt point 0 nongenic,nongenic,nongenic,nongenic -1880 upstream,1788 into,1790 into,1794 into {Y39E4B.11},{Y39E4B.12b},{Y39E4B.12a.1,Y39E4B.12a.2},{Y39E4B.12c} 2609 CB6841_redo III 13264546 1 C A 255 1.00 63 62 0 17 17 @AaAAaAaAaaaAaAaAa point 0 nongenic,nongenic -1206 upstream,307 into {F56A8.5},{F56A8.4} 2610 CB6841_redo III 13264548 1 T A 255 1.00 63 62 0 18 18 @AaAAaAaAaaaAaAaAaa point 0 nongenic,nongenic -1204 upstream,305 into {F56A8.5},{F56A8.4} 2611 CB6841_redo III 13265024 1 A T 255 1.00 63 62 0 25 25 @TTtTTTttTTtTTTTttTttTtTtT point 0 nongenic,nongenic -728 upstream,171 downstream {F56A8.5},{F56A8.4} 2612 CB6841_redo III 13281779 1 A G 255 1.00 63 62 0 24 24 @ggGGgGgGggGGgggGgGGgggGg point 0 SNP none {haw49884} 2613 CB6841_redo III 13398824 1 C T 255 1.75 63 62 1 28 29 @TtT,TTTttTttTtttTTtTTTtTtTTTt point 0 missense GCA->GTA[Ala->Val] {F11F1.2} 2618 CB6841_redo III 13536919 1 C A 31 1.00 63 62 0 5 5 @AaaGg point 0 nongenic,nongenic -12943 upstream,2916 into {Y76A2B.1},{Y76A2B.2} 2643 CB6841_redo III 13746149 1 C T 255 1.00 63 62 0 41 41 @TTtTttTTttttTTttTTTtttTTtTtttTTTttttTTTTT point 0 missense CCG->CTG[Pro->Leu] {K08E3.1} 2650 CB6841_redo III 13750753 1 T C 139 1.00 63 62 0 7 7 @Ccccccc point 0 nongenic,nongenic -1597 upstream,-2184 upstream {K08E3.10},{K08E3.2} 2651 CB6841_redo III 13751247 1 G C 3 3.69 63 2 1 5 6 @CCAC.C point 0 nongenic,nongenic -1103 upstream,-2678 upstream {K08E3.10},{K08E3.2} 2659 CB6841_redo IV 30219 1 C G 3 2.88 0 0 3 4 7 @.GG.GG, point 0 nongenic,nongenic -3830 upstream,2162 into {Y38C1AB.7},{Y38C1AB.2} 2663 CB6841_redo IV 149978 1 A G 255 1.00 63 62 0 28 28 @GgggGGGGGgGGgGGggGGgggGgggGg point 0 SNP none {haw50079} 2666 CB6841_redo IV 235661 1 G A 255 1.00 63 62 0 29 29 @AAAaAaaaaaaaaaaaAAaaaAaAaAAAa point 0 nongenic,nongenic -3886 upstream,1790 into {R02D3.3.1},{R02D3.4} 2667 CB6841_redo IV 254920 1 G A 255 1.00 63 62 0 25 25 @AAAAaAaAaAAAaAaAaaaaaAaaA point 0 missense CCA->TCA[Pro->Ser] {R02D3.7} 2668 CB6841_redo IV 259872 1 G A 255 1.06 63 62 0 23 23 @AaAaAAAAAaAaAaAAAAaAaaA point 0 nongenic,nongenic,nongenic,nongenic -660 upstream,-667 upstream,111 downstream,327 downstream {T21D12.2.1},{T21D12.2.2},{T21D12.3.1},{T21D12.3.2} 2669 CB6841_redo IV 270503 1 G A 255 1.00 63 62 0 21 21 @aAaAAaaAAAAaaaaaAAaAA point 0 nongenic 1097 into {T21D12.11} 2670 CB6841_redo IV 273897 1 C A 255 1.56 63 62 0 18 18 @AaaAaAAAaAaAAAaAaA point 0 nongenic,nongenic,nongenic -510 upstream,-672 upstream,-704 upstream {T21D12.5},{T21D12.9c.1},{T21D12.9a,T21D12.9c.2} 2673 CB6841_redo IV 483814 1 A T 255 1.00 63 62 0 19 19 @TTTtTttTttttTtTtTtt point 0 nongenic -2646 upstream {M04G7.3a,M04G7.3b.1} 2674 CB6841_redo IV 486384 1 A T 255 1.00 63 62 0 17 17 @tttTttttTTTTTTtTt point 0 nongenic -5216 upstream {M04G7.3a,M04G7.3b.1} 2675 CB6841_redo IV 495583 1 T G 255 1.00 63 62 0 17 17 @GgGGgGgggGgggGGgg point 0 SNP none {haw50110} 2676 CB6841_redo IV 513220 1 G A 145 7.19 63 62 11 15 26 @aAA..AA.aAA.A..A..a.AAA.A. point 0 nongenic,nongenic,nongenic 228 downstream,537 downstream,6237 into {W03G1.3},{W03G1.6b},{W03G1.6a} 2681 CB6841_redo IV 669630 1 G A 255 1.00 63 62 0 35 35 @AAAAAaaAAaAAaAaAAaaaAaaaAAAaAaaaAaa point 0 missense CCA->TCA[Pro->Ser] {K11H12.11} 2683 CB6841_redo IV 743294 1 A G 255 1.00 63 62 0 25 25 @gggGGGGggGGGgGgGggGGGgGgG point 0 nongenic,nongenic -6572 upstream,1212 into {Y55F3C.3b},{Y55F3C.3a} 2684 CB6841_redo IV 757658 1 T A 255 1.00 63 62 0 35 35 @aaAAaAAAAAAgaAaaaAAAAaAaAaAaAaAAaaa point 0 missense TTC->TAC[Phe->Tyr] {Y55F3C.2} 2685 CB6841_redo IV 807998 1 T C 255 1.00 63 62 0 22 22 @CcccCccCCCCcCcccccCccc point 0 SNP none {haw50174} 2687 CB6841_redo IV 871128 1 A C 12 1.00 63 0 0 4 4 @CCCC point 0 nongenic,nongenic -3783 upstream,3402 into {Y55F3BR.1},{Y55F3BR.2} 2692 CB6841_redo IV 976182 1 T C 255 1.00 63 62 0 16 16 @CccccCCccccCCccC point 0 SNP none {haw50433} 2693 CB6841_redo IV 976984 1 A G 255 1.00 63 62 0 19 19 @GGggGGgGGggGGGggGgG point 0 SNP none {haw50435} 2694 CB6841_redo IV 991371 1 G C 255 1.00 63 62 0 21 21 @CccCCCcccCCCCccCcCccc point 0 nongenic,nongenic -917 upstream,-931 upstream {Y55F3AM.6a,Y55F3AM.6b},{Y55F3AM.7} 2695 CB6841_redo IV 997032 1 C G 255 1.00 63 62 0 18 18 @GgGgggGgggGGGGgGGG point 0 nongenic,nongenic,nongenic -2197 upstream,600 into,947 downstream {Y55F3AM.5},{Y55F3AM.6a},{Y55F3AM.6b} 2698 CB6841_redo IV 1197597 1 G T 255 1.00 63 62 0 18 18 @TTTTTTTTTttTTtTtTt point 0 SNP none {haw50776} 2701 CB6841_redo IV 1336743 1 A C 12 1.25 63 20 2 3 5 @,.Ccc point 0 nongenic,nongenic -4471 upstream,2632 into {F58F6.6},{F53H1.3} 2702 CB6841_redo IV 1336744 1 C A 20 1.38 63 12 2 4 6 @,.AaaA point 0 nongenic,nongenic -4470 upstream,2631 into {F58F6.6},{F53H1.3} 2704 CB6841_redo IV 1386027 1 A G 255 1.00 63 62 0 17 17 @GGGGggGgGGggGgGGG point 0 nongenic,nongenic -134 upstream,-9464 upstream {Y104H12A.1},{F58F6.3} 2706 CB6841_redo IV 1438459 1 A T 255 1.00 63 62 0 28 28 @TTttTTtTtTttTTTTtTtttTtttttT point 0 missense TCC->ACC[Ser->Thr] {Y77E11A.11.1,Y77E11A.11.2} 2707 CB6841_redo IV 1453831 1 G A 255 1.00 63 62 0 22 22 @aAAAaaAaAAaAaAaAaaaaaa point 0 nongenic -3242 upstream {Y77E11A.2} 2715 CB6841_redo IV 1474162 1 T C 22 1.00 63 0 0 5 5 @CccCc point 0 nongenic,nongenic,nongenic -11317 upstream,-7780 upstream,947 into {Y77E11A.16},{Y77E11A.12a},{Y77E11A.12b} 2717 CB6841_redo IV 1477963 1 T A 81 1.00 63 62 4 9 13 @AAAaaAAA.,.a. point 0 nongenic,nongenic -2854 upstream,-7516 upstream {Y77E11A.12b},{Y77E11A.16} 2718 CB6841_redo IV 1482043 1 G A 255 1.00 63 62 0 21 21 @AAaaaaaaAAAAAAAaAAAAA point 0 nongenic,nongenic -3436 upstream,-6934 upstream {Y77E11A.16},{Y77E11A.12b} 2719 CB6841_redo IV 1483377 1 T A 255 1.00 63 62 0 17 17 @aaAaaAAaAaAaaAaaa point 0 nongenic,nongenic -2102 upstream,-8268 upstream {Y77E11A.16},{Y77E11A.12b} 161922 CB6841_redo IV 1507204 272 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered codon 306 to codon 334 (6 % of 452 codons) {Y77E11A.1.1,Y77E11A.1.2} 2720 CB6841_redo IV 1513856 1 G A 255 1.00 63 62 0 21 21 @aAAAaAaAaAaAaaaAaAAaa point 0 nongenic 1371 into {K03H6.2} 2721 CB6841_redo IV 1515189 1 A G 67 1.00 63 62 2 4 6 @,.GGgg point 0 missense AAG->AGG[Lys->Arg] {K03H6.2} 2722 CB6841_redo IV 1516026 1 G A 255 1.38 63 62 2 20 22 @AAAaAAaa.aaaAAaAaA,AAA point 0 nongenic,nongenic 501 into,799 downstream {K03H6.7},{K03H6.2} 2723 CB6841_redo IV 1605502 1 G A 255 1.00 63 62 0 21 21 @aaaAaaAaaAAAAaAAAAAaA point 0 silent CTG->CTA[Leu->Leu] {Y41D4B.12a,Y41D4B.12b} 2730 CB6841_redo IV 1677009 1 G A 255 1.69 63 62 0 20 20 @AaaaaAAAAaaaaaaaAAAA point 0 nongenic,nongenic -22887 upstream,292 into {K08D12.5},{Y41D4B.24} 2731 CB6841_redo IV 1695528 1 G C 255 1.00 63 62 0 26 26 @cCCcCCCCCCCCcCCccCCCccccCc point 0 nongenic,nongenic -13370 upstream,-4368 upstream {Y41D4B.24},{K08D12.5} 2732 CB6841_redo IV 1726632 1 G T 83 3.00 63 44 0 7 7 @ttttTtT point 0 nongenic -2490 upstream {K08D12.7} 2734 CB6841_redo IV 1783081 1 G A 255 1.00 63 62 0 32 32 @aAAAaAaAAAaAaaAaaAaAAAAaAAAAAaaa point 0 nongenic -1520 upstream {Y41D4A.8} 2735 CB6841_redo IV 1787086 1 A T 253 1.00 63 62 0 12 12 @ttttTTtTTTTT point 0 nongenic -5525 upstream {Y41D4A.8} 2736 CB6841_redo IV 1812233 1 A G 143 5.81 63 62 0 16 16 @gGGGGgGGggGGGGGg point 0 nongenic,nongenic -8252 upstream,2865 into {Y38C1BA.1},{Y38C1BA.2a,Y38C1BA.2b} 2737 CB6841_redo IV 1847094 1 G A 255 1.00 63 62 0 26 26 @AAAAAAAAAAaaAAaaAAAAaaAAaA point 0 nongenic,nongenic,splice_acceptor -871 upstream,91 into,none {F55A8.2a.1,F55A8.2a.2},{K07A9.4},{K07A9.4} 2741 CB6841_redo IV 1868017 1 G A 255 1.00 63 62 0 23 23 @aaAAAAaaaAaAAaaAAAaaAaa point 0 nongenic,nongenic,nongenic,nongenic,nongenic -2992 upstream,11922 into,12545 into,12570 into,9496 into {F55A8.2d},{F55A8.2b,F55A8.2e},{F55A8.2a.2},{F55A8.2a.1},{F55A8.2c} 2742 CB6841_redo IV 1889323 1 G A 255 1.06 63 62 0 18 18 @AaAAAaAaaaAAaAAAaa point 0 nongenic -12998 upstream {F55A8.1.1} 2743 CB6841_redo IV 1917013 1 A C 242 1.00 63 62 0 14 14 @CCcccCcccCcccc point 0 SNP none {haw51958} 161923 CB6841_redo IV 1932173 73 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 8603 to 8676 bp into {F52C12.4} 161924 CB6841_redo IV 1951503 60 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3306 to 3366 bp into {F52C12.3} 2761 CB6841_redo IV 2022963 1 C T 54 1.00 63 54 1 3 4 @ttt, point 0 nongenic 10029 into {Y76B12C.7} 2762 CB6841_redo IV 2022964 1 A G 54 1.00 63 54 1 3 4 @ggg, point 0 nongenic 10028 into {Y76B12C.7} 2763 CB6841_redo IV 2106939 1 A C 131 1.62 63 62 0 13 13 @CCCCCCCCCCCCC point 0 nongenic,nongenic -7049 upstream,2885 into {C23H5.11},{C23H5.7} 2764 CB6841_redo IV 2130505 1 A T 255 1.00 63 62 0 22 22 @tTttTTttTtTTtTtTtttTtt point 0 SNP none {haw52294} 2765 CB6841_redo IV 2150178 1 A C 3 1.25 63 62 3 6 9 @G.GGc.Gc, point 0 nongenic,nongenic -879 upstream,470 downstream {C54E4.5},{C54E4.3} 2770 CB6841_redo IV 2226862 1 T C 255 1.62 63 62 0 18 18 @CcCCCCcCCcCCcCcCcc point 0 nongenic,nongenic 4034 into,4036 into {T04C4.1a,T04C4.1b.2},{T04C4.1b.1} 2773 CB6841_redo IV 2354193 1 T A 175 7.88 63 62 0 14 14 @AAaAaAaAAAAaAA point 0 nongenic,nongenic,nongenic -4736 upstream,-5279 upstream,1538 into {Y38F2AR.5},{Y38F2AR.7.1},{Y38F2AR.6} 2774 CB6841_redo IV 2354197 1 C T 173 7.88 63 62 0 16 16 @TTtTtTtTTTTtTTTT point 0 nongenic,nongenic,nongenic -4732 upstream,-5283 upstream,1534 into {Y38F2AR.5},{Y38F2AR.7.1},{Y38F2AR.6} 2775 CB6841_redo IV 2357212 1 G T 172 1.00 63 62 0 7 7 @Ttttttt point 0 SNP none {haw52736} 2776 CB6841_redo IV 2359440 1 A G 255 1.00 63 62 0 15 15 @gggGggGGgGgGGGg point 0 SNP none {haw52752} 2780 CB6841_redo IV 2373373 1 T C 255 2.56 63 62 0 13 13 @ccCcCcccCCCCC point 0 nongenic,nongenic -5089 upstream,2742 into {Y38F2AR.13},{Y38F2AR.5} 2784 CB6841_redo IV 2502956 1 A G 216 2.56 63 62 0 22 22 @GGgGGggGGgGgGgGGGgGGGG point 0 nongenic,nongenic -1368 upstream,905 downstream {Y69A2AR.16},{Y69A2AR.17} 2788 CB6841_redo IV 2544993 1 A T 255 1.00 63 62 0 17 17 @TTtTtTTttTTTTtTtT point 0 nongenic 2671 into {Y69A2AR.15} 2793 CB6841_redo IV 2645099 1 C T 10 1.00 63 34 1 5 6 @TTT,Tt point 0 nongenic 2124 into {Y69A2AR.2a} 2801 CB6841_redo IV 2905125 1 A G 13 4.81 0 12 0 5 5 @ggggg point 0 nongenic,nongenic -13604 upstream,2782 into {Y54G2A.50},{Y54G2A.21} 2804 CB6841_redo IV 2999123 1 A G 255 1.00 63 62 0 27 27 @gggGGgggGgGGGGgGGGgggggGgGG point 0 silent CCT->CCC[Pro->Pro] {Y54G2A.27} 2805 CB6841_redo IV 3023006 1 T C 5 1.00 63 62 5 12 17 @CC.CC,CCCC,CCCC,, point 0 nongenic,nongenic 401 downstream,793 downstream {Y54G2A.29},{Y54G2A.1} 2808 CB6841_redo IV 3098667 1 A T 7 1.00 63 62 3 3 6 @..,tTt point 0 nongenic -11747 upstream {Y67D8C.9a} 2821 CB6841_redo IV 3366956 1 T C 3 7.00 0 2 177 78 255 @,.,,CCCCCCCCCC,CccggC,,.........,C........,c.....G....,.........CC,,,.......,,,.......,C,,C..c.c,.c point 0 nongenic,nongenic -2236 upstream,880 downstream {Y55H10A.1},{Y55H10A.2} 2823 CB6841_redo IV 3446038 1 T G 3 1.00 63 2 1 4 5 @GGGG. point 0 nongenic,nongenic,nongenic -1839 upstream,-7566 upstream,488 into {F09D12.2},{F58E2.9},{F58E2.5} 2826 CB6841_redo IV 3525903 1 T A 123 1.00 63 62 0 5 5 @aaaaa point 0 three_prime_UTR none {Y37E11C.1} 2830 CB6841_redo IV 3675361 1 G T 255 1.00 63 62 0 35 35 @TtTTttTtTtTTtttTTttTtTTtTtttTatTtTT point 0 nongenic -6662 upstream {Y37E11AL.6} 2852 CB6841_redo IV 4166340 1 A T 255 1.12 63 62 0 30 30 @ttTtttTtttTtTtTttttTTtTttTTTtT point 0 nongenic,nongenic -1690 upstream,170 downstream {K08D10.5},{K08D10.7.1,K08D10.7.2} 2853 CB6841_redo IV 4282932 1 C T 255 1.00 63 62 0 21 21 @ttTTTttTTtTTtTTTtTTtt point 0 missense GGT->GAT[Gly->Asp] {F15E6.6} 2854 CB6841_redo IV 4583606 1 C G 16 1.00 63 4 1 3 4 @gGg. point 0 five_prime_UTR none {F28E10.1d} 2856 CB6841_redo IV 4596983 1 T G 3 1.00 63 2 1 4 5 @gg,gg point 0 nongenic,nongenic -202 upstream,313 downstream {F19C7.3},{F19C7.5} 2859 CB6841_redo IV 4620823 1 C T 255 1.00 63 62 0 19 19 @ttTttTTTTTTttttTTtt point 0 nongenic,nongenic,nongenic -12864 upstream,-2040 upstream,3287 into {R105.1},{F19C7.8b},{F19C7.8a} 2860 CB6841_redo IV 4695312 1 G T 180 3.25 63 62 0 11 11 @tTttttttttt point 0 nongenic 1506 into {T22B11.1} 2861 CB6841_redo IV 4766576 1 G A 255 1.00 63 62 0 25 25 @aaaAaaAaAaAaaAAaaaAaAAAaa point 0 missense CGC->CAC[Arg->His] {Y17G9B.1} 2864 CB6841_redo IV 4809349 1 C T 255 1.00 63 62 0 26 26 @TTttTTTtTTtTTTtTtTtttTTTTt point 0 silent CAG->CAA[Gln->Gln] {H06H21.6.1,H06H21.6.2,H06H21.6.3,H06H21.6.4,H06H21.6.5} 2865 CB6841_redo IV 4821642 1 A G 20 1.00 63 62 2 3 5 @.,ggg point 0 nongenic,nongenic -520 upstream,-577 upstream {H06H21.8a},{H06H21.8b} 2866 CB6841_redo IV 4913008 1 C T 255 1.00 63 62 0 21 21 @TTTtTTtTtTTTttttTTTtt point 0 nongenic,nongenic -237 upstream,-340 upstream {Y9C9A.17},{Y9C9A.11} 2867 CB6841_redo IV 4931163 1 A C 255 1.00 63 62 0 17 17 @CCcCCccccccccCccC point 0 missense,SNP AAC->CAC[Asn->His],none {Y9C9A.8},{haw56120,snp_Y9C9A[1]} 2868 CB6841_redo IV 4948939 1 C T 207 9.44 31 62 0 21 21 @TTtttttTttttttTttTttt point 0 nongenic,nongenic,nongenic -5237 upstream,430 downstream,530 downstream {Y9C9A.3},{Y9C9A.4a},{Y9C9A.4b} 2875 CB6841_redo IV 4959327 1 C T 255 1.00 63 62 0 24 24 @TtTTtttTTTTTTTTTtTTTtttT point 0 nongenic -1397 upstream {Y9C9A.2} 2876 CB6841_redo IV 4972666 1 C T 255 1.00 63 62 0 21 21 @tTTTttTtTtTttTTtTTttt point 0 missense,SNP GTT->ATT[Val->Ile],none {Y9C9A.15},{haw56128} 2879 CB6841_redo IV 5055091 1 G A 255 1.00 63 62 0 16 16 @aaaAaAaAAAAAaaAA point 0 nongenic,nongenic -9704 upstream,491 downstream {C09B9.8},{C09B9.6} 2881 CB6841_redo IV 5218703 1 C T 3 2.00 0 24 8 13 21 @TTtTTtTt,,,T,..Tt,.tt point 0 nongenic,nongenic -117 upstream,-3519 upstream {Y59E9AL.3},{Y59E9AL.4.1} 2884 CB6841_redo IV 5308471 1 A C 255 1.00 63 62 0 23 23 @CCCcCcCCCcCcCCcccCCCccc point 0 nongenic,nongenic -1751 upstream,-99 upstream {ZK354.3},{ZK354.9} 2886 CB6841_redo IV 5426794 1 G T 255 1.00 63 62 0 28 28 @TTtTTTtTtTTtTTtttttttTTttttt point 0 SNP none {haw56297} 2890 CB6841_redo IV 5557619 1 C T 3 2.00 0 26 7 15 22 @,Tt.tT,,TtT,.tTtTtTtT. point 0 nongenic 1190 into {T12E12.1} 2897 CB6841_redo IV 5752120 1 C T 255 1.00 63 62 0 26 26 @tTTtTTttTtTTTtTTtTttTTtTTt point 0 nongenic,nongenic,nongenic,nongenic -2037 upstream,-39160 upstream,4384 into,4750 into {C45E5.6a.1},{C31H1.2},{C45E5.6c.3,C45E5.6c.4,C45E5.6c.7},{C45E5.6b} 2898 CB6841_redo IV 5960962 1 C T 255 1.00 63 62 0 25 25 @tttttttTttTtTttTttttTTttt point 0 nongenic,nongenic -13370 upstream,711 downstream {K02B2.5.1},{K02B2.6} 2899 CB6841_redo IV 6006004 1 C T 35 1.00 63 62 24 29 53 @T.tt..tT..tT..T,,T,T,TT.t.t..,.tttt,Tt.T,.tT,tTttt,T, point 0 nongenic 333 downstream {C46G7.3} 2900 CB6841_redo IV 6006018 1 A T 32 1.00 63 62 22 25 47 @,T,TT.t.t..,.tttt,Tt.T,.tT,tTttt,T,,,T,tttT,,.. point 0 nongenic 319 downstream {C46G7.3} 2901 CB6841_redo IV 6180164 1 C T 255 1.00 63 62 0 25 25 @TtTTtttTtTttttttTttTtTTtT point 0 nongenic,nongenic -4971 upstream,-7139 upstream {C11D2.2},{C11D2.6d} 2902 CB6841_redo IV 6232842 1 C T 255 1.00 63 62 0 18 18 @TTttTtTtTTtTttTttT point 0 nongenic,nongenic -394 upstream,437 downstream {F58F9.3a,F58F9.3b},{F58F9.4} 2903 CB6841_redo IV 6238552 1 G T 255 1.00 63 62 0 23 23 @TTTttTttttTttTttTtttTTt point 0 nongenic,nongenic,nongenic -1024 upstream,-1737 upstream,377 into {F58F9.6},{F58F9.9},{F58F9.8} 2904 CB6841_redo IV 6245696 1 C T 255 1.00 63 62 0 18 18 @TtttTttttTttTttttT point 0 missense GGA->GAA[Gly->Glu] {F58F9.7.1,F58F9.7.2} 2905 CB6841_redo IV 6250390 1 C T 104 1.94 63 62 9 11 20 @ttt.,TT.,t,T..,,tTTT point 0 missense CGT->TGT[Arg->Cys] {F58F9.1} 2911 CB6841_redo IV 6481986 1 T A 255 1.00 63 62 0 15 15 @aaaaAaAAaAAaAAa point 0 nongenic,nongenic -8782 upstream,1482 into {Y73B6BL.27},{Y73B6BL.1} 2913 CB6841_redo IV 6535878 1 C T 255 1.00 63 62 0 15 15 @tTtTttTTTtttTTT point 0 nongenic,nongenic -284 upstream,255 downstream {C01G5.3},{C01G5.4} 2915 CB6841_redo IV 6699184 1 G T 35 5.88 63 62 14 46 60 @,,TTTT,t.TTTTTTTTTTTTT.TTT,TTTtTT.tTTTTT.TT,TTTT.T.T.TTTT,T. point 0 nongenic,nongenic -31145 upstream,-5715 upstream {Y73B6A.1},{Y73B6A.6} 2917 CB6841_redo IV 6704830 1 C T 255 1.00 63 62 0 38 38 @ttTttttTtTTTttttTttttTttTtTTtTtttttttt point 0 nongenic,nongenic -36791 upstream,-69 upstream {Y73B6A.1},{Y73B6A.6} 2922 CB6841_redo IV 6771948 1 C T 255 1.00 63 62 0 33 33 @TttTtTTtttTtTTttTtTtttTtttTTTTTtT point 0 nongenic,nongenic -6188 upstream,1155 into {C17H12.13b.2},{C17H12.13a,C17H12.13b.1} 2923 CB6841_redo IV 6840015 1 C T 255 1.00 63 62 0 21 21 @TTTttTTTTtTTTttTttTtt point 0 nongenic -2932 upstream {C05B10.1} 2924 CB6841_redo IV 7034417 1 A T 255 1.00 63 62 0 31 31 @TtttTtttTttTtttTTTTTtTTTttTtTtt point 0 missense GTG->GAG[Val->Glu] {C06G3.9.1,C06G3.9.2} 2929 CB6841_redo IV 7056612 1 A G 255 1.00 63 62 0 30 30 @GgGGGGGGGGgggGGGGGGGgGggggGgGG point 0 SNP none {haw57660} 2938 CB6841_redo IV 7170057 1 C T 255 1.00 63 62 0 27 27 @TttTtttttTtTTTtTttTTTttTTtT point 0 missense GCT->ACT[Ala->Thr] {C42D4.9} 5722 CB6841_redo IV 7226681 0 X X -1000 -999.99 -1000 -1000 2 1 3 @..tt indel 0 nongenic,nongenic,nongenic -74 upstream,586 downstream,587 downstream {R13A1.10},{D2024.5b.1},{D2024.5a.1} 2939 CB6841_redo IV 7235475 1 C T 255 1.00 63 62 0 35 35 @TTTtttTtTtTTttTtTTTTtttTtttTTTtttTT point 0 nongenic -2236 upstream {D2024.3} 2945 CB6841_redo IV 7282805 1 C T 255 1.00 63 62 0 20 20 @TtTTTtTtTTTTTTtTTTtt point 0 nongenic,nongenic,nongenic -19584 upstream,-435 upstream,266 into {C06E4.7},{C06E4.1},{C06E4.2} 2951 CB6841_redo IV 7435026 1 C T 255 1.00 63 62 0 34 34 @TtttTTTtTTtTTttTtttTTTTttTTttTtttT point 0 nongenic,nongenic -5160 upstream,2720 into {B0496.3c},{B0496.3a,B0496.3b} 2953 CB6841_redo IV 7527069 1 T G 255 1.00 63 62 0 31 31 @gGGGgGGGGGGggGggggGGGgGgGGGGgGg point 0 SNP none {haw57987} 2954 CB6841_redo IV 7570846 1 C T 255 1.00 63 62 0 29 29 @ttttTTTTTTtTTTTTTTTtTTtttTTtt point 0 silent TCC->TCT[Ser->Ser] {F32E10.3} 2955 CB6841_redo IV 7587390 1 C T 255 1.00 63 62 0 25 25 @aTTttTtTtTTttTTttTTTTtTtt point 0 nongenic -1524 upstream {F32E10.7} 2956 CB6841_redo IV 7591627 1 A C 78 6.94 25 62 2 12 14 @cCcCCCCCCCcc., point 0 missense GAA->GAC[Glu->Asp] {Y2C2A.1} 2957 CB6841_redo IV 7596293 1 A C 18 9.00 0 6 0 6 6 @CcCccc point 0 missense ACT->CCT[Thr->Pro] {Y2C2A.1} 161926 CB6841_redo IV 7596529 96 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 5984 to 6080 bp into {Y2C2A.1} 161927 CB6841_redo IV 7598921 75 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered codon 2626 to codon 2632 (0 % of 4901 codons) {Y2C2A.1} 2969 CB6841_redo IV 7600485 1 A T 255 1.00 63 62 0 38 38 @TTtttTTtTTTTTTTTTtTTTttTTTTTTttTTtTTtT point 0 missense,SNP CAA->CAT[Gln->His],none {Y2C2A.1},{haw58035} 2970 CB6841_redo IV 7607350 1 A G 255 2.75 63 62 0 32 32 @GGGGGGgGGgGGGgGGgGGGgGGGgGgGGGGG point 0 nongenic,nongenic -12263 upstream,886 into {F45E4.3b.1},{F45E4.4} 2971 CB6841_redo IV 7607351 1 A G 255 2.75 63 62 0 31 31 @GGGGGgGGgGGGgGGgGGGgGGGgGgGGGGG point 0 nongenic,nongenic -12262 upstream,887 into {F45E4.3b.1},{F45E4.4} 2972 CB6841_redo IV 7607353 1 A G 255 3.31 63 62 0 33 33 @GGGGGgGGgGGGgGGgGGGgGGGgGgGGGGGGG point 0 nongenic,nongenic -12260 upstream,889 into {F45E4.3b.1},{F45E4.4} 2973 CB6841_redo IV 7648639 1 C T 255 1.00 63 62 0 30 30 @TTTtTttTtTtTttTTtTttttttttTttt point 0 missense GAT->AAT[Asp->Asn] {F45E4.10a,F45E4.10b.1,F45E4.10b.2} 2974 CB6841_redo IV 7668608 1 C T 255 1.00 63 62 0 26 26 @tTTTtTtTTtTTttTTTTTtTTTTtt point 0 missense TGT->TAT[Cys->Tyr] {C08G9.2} 2975 CB6841_redo IV 7727542 1 A G 31 1.00 63 14 0 4 4 @GGgg point 0 silent CCA->CCG[Pro->Pro] {C50F7.5.1,C50F7.5.2} 2976 CB6841_redo IV 7733402 1 C T 255 1.00 63 62 0 30 30 @TttTtTTtttttTTTtttTtTtTTttttTT point 0 silent CTA->TTA[Leu->Leu] {C50F7.3} 2978 CB6841_redo IV 7766638 1 G A 255 1.00 63 62 0 21 21 @AAaaAaAAaaAaAAAAAAaAA point 0 missense CGC->CAC[Arg->His] {C46A5.1} 2979 CB6841_redo IV 7775608 1 C T 255 1.00 63 62 0 26 26 @tttttTtTtTTtTTtTttTttTTTTt point 0 missense CAT->TAT[His->Tyr] {C33H5.7} 2981 CB6841_redo IV 7910767 1 C T 255 1.00 63 62 0 19 19 @TtTTTttTTTTtttTtttT point 0 five_prime_UTR,silent none,ATC->ATT[Ile->Ile] {C49H3.5b},{C49H3.5a} 2982 CB6841_redo IV 7911176 1 G A 255 1.00 63 62 0 35 35 @AaaaaAAaaAAAAaaaaaAAAAAAaaaaaaaAAAA point 0 five_prime_UTR,missense none,CGC->CAC[Arg->His] {C49H3.5b},{C49H3.5a} 2983 CB6841_redo IV 7942691 1 C T 255 1.00 63 62 0 21 21 @TtTtTtTttTTTttTtTtTtt point 0 nongenic,nongenic -1889 upstream,915 downstream {F20D12.5},{F20D12.4.1,F20D12.4.2} 2984 CB6841_redo IV 7992708 1 C T 255 1.00 63 62 0 20 20 @ttTTTtTtTTTtttTTttTT point 0 missense GGA->AGA[Gly->Arg] {Y42H9B.2} 2985 CB6841_redo IV 8012779 1 C A 60 1.00 63 34 0 4 4 @AAaa point 0 nongenic,nongenic -1330 upstream,-366 upstream {C26B2.8},{Y42H9B.3} 2986 CB6841_redo IV 8015831 1 G C 255 4.81 63 62 0 23 23 @cCCccccCCcccCCccCcCcccc point 0 nongenic,nongenic -363 upstream,211 downstream {C26B2.7},{C26B2.8} 2989 CB6841_redo IV 8116736 1 C T 255 1.00 63 62 0 25 25 @tTtTTtttTTTtttTttTttttTTT point 0 nongenic,nongenic -2334 upstream,988 into {F42G8.8},{F42G8.9} 2990 CB6841_redo IV 8144312 1 C T 255 1.00 63 62 0 27 27 @tTtttttTTttTtttTTTttTtTTTTT point 0 nongenic,nongenic -4462 upstream,832 into {B0218.3},{F42G8.3a,F42G8.3b} 2991 CB6841_redo IV 8226855 1 C T 255 1.00 63 62 0 25 25 @TtTtTTTtTttttTTttTTtttttt point 0 missense GTT->ATT[Val->Ile] {T09A12.4a.1,T09A12.4a.2,T09A12.4a.3,T09A12.4b,T09A12.4c,T09A12.4d.1,T09A12.4d.2} 2992 CB6841_redo IV 8238337 1 T A 255 1.00 63 62 0 31 31 @AAAAaAaAaaaaAAAaAAaAaaaAaaaaAAa point 0 nongenic,nongenic -1753 upstream,-6074 upstream {T09A12.4a.2,T09A12.4c,T09A12.4d.1},{T09A12.1} 2993 CB6841_redo IV 8245210 1 C T 255 1.00 63 62 0 25 25 @tttttTtTTTtTTTttTTTtTtttT point 0 silent TAC->TAT[Tyr->Tyr] {T09A12.1} 2996 CB6841_redo IV 8313446 1 C T 255 1.00 63 62 0 20 20 @tTtTtTTTTttTtTTttttT point 0 nongenic,nongenic -12502 upstream,-517 upstream {F35H10.3},{F35H10.10} 2999 CB6841_redo IV 8374858 1 A G 54 1.00 30 0 0 4 4 @gggg point 0 nongenic,nongenic,nongenic,nongenic -5653 upstream,472 into,496 into,856 downstream {D2096.6},{D2096.3.3},{D2096.3.1,D2096.3.2},{D2096.7b} 3000 CB6841_redo IV 8374859 1 G T 58 1.00 36 0 0 5 5 @ttttt point 0 nongenic,nongenic,nongenic,nongenic -5654 upstream,471 into,495 into,855 downstream {D2096.6},{D2096.3.3},{D2096.3.1,D2096.3.2},{D2096.7b} 3005 CB6841_redo IV 8468403 1 C T 210 5.44 63 62 0 12 12 @TTTttttTttTt point 0 nongenic,nongenic,nongenic,nongenic -5677 upstream,-8143 upstream,3570 into,3654 into {C28C12.11b},{T01B11.4},{T01B11.7.2},{T01B11.7.1} 3023 CB6841_redo IV 8536180 1 C T 255 1.00 63 62 0 34 34 @TtTtTTttTTTtTttTtTtttTtTTtttTTtTTT point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -350 upstream,-639 upstream,1542 into,1982 into,343 into,561 into {C09G4.2d.2},{C09G4.2d.1},{C09G4.2a},{C09G4.2c},{C09G4.2b.2,C09G4.2d.3,C09G4.2d.4},{C09G4.2b.1} 5724 CB6841_redo IV 8565266 0 X X -1000 -999.99 -1000 -1000 4 -3 1 @A,,..g indel 3 nongenic,nongenic -1899 upstream,-686 upstream {Y59H11AM.2},{Y59H11AM.3} 3025 CB6841_redo IV 8565277 1 C G 3 9.19 63 2 1 4 5 @gggg, point 0 nongenic,nongenic -1887 upstream,-697 upstream {Y59H11AM.2},{Y59H11AM.3} 3027 CB6841_redo IV 8566666 1 A C 200 8.12 63 62 0 17 17 @CCCCCCCCCCCCcCCCc point 0 nongenic,nongenic -2086 upstream,-498 upstream {Y59H11AM.3},{Y59H11AM.2} 3028 CB6841_redo IV 8566667 1 G C 174 8.12 63 62 0 17 17 @CCCCCCCCCCCCcCCCa point 0 nongenic,nongenic -2087 upstream,-497 upstream {Y59H11AM.3},{Y59H11AM.2} 3029 CB6841_redo IV 8571563 1 C T 211 8.81 57 62 1 18 19 @.ATtTtTTTttTtTttttT point 0 silent ACC->ACT[Thr->Thr] {Y59H11AM.1} 3036 CB6841_redo IV 8574132 1 T A 14 9.25 0 0 0 4 4 @aaAa point 0 nongenic -11391 upstream {Y59H11AR.2a.2} 3048 CB6841_redo IV 8575147 1 A C 16 8.75 24 22 1 105 106 @CCCCCCCcCCCCCCCccCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCcCCCCCCCccCCCC.CcCCCCCCCCCccccCcccCcccCcc point 0 nongenic -10376 upstream {Y59H11AR.2a.2} 3063 CB6841_redo IV 8602902 1 C A 255 1.00 63 62 0 25 25 @AaaAaaAaaAaAAAaAaAaaAAAaA point 0 SNP none {haw58423} 3064 CB6841_redo IV 8602934 1 C A 255 1.00 63 62 0 27 27 @AaAaAaaAAAaAAAaAAaAaAAaAAAa point 0 SNP none {haw58424} 3065 CB6841_redo IV 8636711 1 C T 255 1.00 63 62 0 22 22 @tttTtttTTttTTttTtttttt point 0 missense CCA->TCA[Pro->Ser] {F42A9.1a,F42A9.1b} 3066 CB6841_redo IV 8676312 1 C T 255 1.00 63 62 0 25 25 @TTtTtTTTtTTTtttTTtTtTTTTT point 0 three_prime_UTR none {F08B4.2b} 3068 CB6841_redo IV 8676766 1 T G 3 1.00 63 0 1 5 6 @GGC,GG point 0 nongenic,nongenic 1191 into,241 downstream {F08B4.2a},{F08B4.2b} 3071 CB6841_redo IV 8676769 1 A G 13 1.00 63 0 0 5 5 @GGGGG point 0 nongenic,nongenic 1188 into,244 downstream {F08B4.2a},{F08B4.2b} 3073 CB6841_redo IV 8676771 1 C G 12 1.00 63 0 0 4 4 @GGGG point 0 nongenic,nongenic 1186 into,246 downstream {F08B4.2a},{F08B4.2b} 3082 CB6841_redo IV 8676812 1 C G 3 1.62 63 2 1 4 5 @.gggg point 0 nongenic,nongenic 1145 into,287 downstream {F08B4.2a},{F08B4.2b} 3083 CB6841_redo IV 8807687 1 C T 255 1.00 63 62 0 20 20 @ttTttttTTttTTTtttttt point 0 nongenic,nongenic -2847 upstream,-8629 upstream {C33D9.1a,C33D9.1b},{T28C6.1} 3084 CB6841_redo IV 8876673 1 G A 255 1.00 63 62 0 23 23 @aaaAAaAAAAAAAaAaAaAaAAa point 0 missense GGA->GAA[Gly->Glu] {C09G9.4} 3085 CB6841_redo IV 8896305 1 C T 129 4.62 63 62 1 17 18 @TTTtTTtTTtT,TTTTTT point 0 nongenic,nongenic -5321 upstream,2218 into {C27B7.5},{C27B7.4} 3088 CB6841_redo IV 9038439 1 G A 255 1.00 63 62 0 23 23 @aaaaaAaaaaAAaAaaAAAAaaa point 0 SNP none {haw58542} 3089 CB6841_redo IV 9046941 1 T A 22 5.69 63 62 7 9 16 @.......AAaaaAaaa point 0 nongenic,nongenic -1608 upstream,-23048 upstream {Y73F4A.1},{ZC410.1a} 3092 CB6841_redo IV 9048306 1 A G 255 5.00 63 62 23 232 255 @GGGGGGGGGGGGGGGggGGGGGGGGGGGGgGGGGGGGGggGGGGGGGGGGGGGGGGGGggggggGGGGGGGGGGGGGGGGGGGGGGGGGgggGGGGGGG point 0 SNP none {haw58549} 3094 CB6841_redo IV 9048807 1 C G 196 1.00 63 62 0 16 16 @gGGgGGGGGGGgGagg point 0 nongenic,nongenic -21182 upstream,-3474 upstream {ZC410.1a},{Y73F4A.1} 3095 CB6841_redo IV 9048812 1 T A 165 1.00 63 62 0 17 17 @AAaAAAAAAAaAagaAa point 0 nongenic,nongenic -21177 upstream,-3479 upstream {ZC410.1a},{Y73F4A.1} 3098 CB6841_redo IV 9155021 1 A T 209 1.00 63 62 0 10 10 @TTttTTTTTt point 0 SNP none {haw58572} 3100 CB6841_redo IV 9251676 1 C T 118 1.00 63 18 0 6 6 @TTtttt point 0 nongenic,nongenic 350 into,836 downstream {Y11D7A.8},{Y11D7A.7} 3101 CB6841_redo IV 9269038 1 T C 255 1.00 63 62 0 19 19 @cCCCCcCcccCCCCccCcc point 0 nongenic,nongenic -1035 upstream,-2498 upstream {Y11D7A.13},{Y11D7A.19} 3102 CB6841_redo IV 9344849 1 C T 255 1.00 63 62 0 23 23 @TtTTttttttTTTttttttTtTt point 0 nongenic,nongenic,nongenic -1737 upstream,1136 into,1515 into {T20D3.8},{T20D3.11b},{T20D3.11a} 3103 CB6841_redo IV 9347943 1 T C 255 1.31 63 62 0 32 32 @CCcCCcCcCcccccCCcCcCCCCCcCcccCCc point 0 nongenic,nongenic,nongenic -4831 upstream,4230 into,4609 into {T20D3.8},{T20D3.11b},{T20D3.11a} 3104 CB6841_redo IV 9370614 1 T G 26 1.00 63 62 1 4 5 @,GGGg point 0 nongenic,nongenic -4130 upstream,-870 upstream {C10C5.1},{C10C5.2} 3117 CB6841_redo IV 9717380 1 T C 30 1.00 63 52 2 2 4 @,.Cc point 0 nongenic -7845 upstream {C28D4.9} 3118 CB6841_redo IV 9717381 1 C T 52 1.00 63 30 1 5 6 @T.Tttt point 0 nongenic -7844 upstream {C28D4.9} 3119 CB6841_redo IV 9745669 1 G A 255 1.44 63 62 0 17 17 @AaaaAAaaAaaAAAaaa point 0 missense CAC->TAC[His->Tyr] {C28D4.5} 3120 CB6841_redo IV 9762597 1 C T 255 1.00 63 62 0 35 35 @TtTTtTtTtTttTTTtttTttttTTtTttTTtTtT point 0 missense ACA->ATA[Thr->Ile] {H27C11.1a,H27C11.1b.1,H27C11.1b.2,H27C11.1b.3,H27C11.1b.4} 3121 CB6841_redo IV 9764971 1 G C 60 4.00 50 62 0 4 4 @TCCC point 0 nongenic,nongenic 506 downstream,676 downstream {H27C11.1a},{T13F2.12} 3122 CB6841_redo IV 9799760 1 C T 255 1.00 63 62 0 25 25 @tTTTtTTtTtTTTTtTtttTTtTtt point 0 nongenic,nongenic,nongenic,nongenic,nongenic -2429 upstream,-3239 upstream,357 into,359 into,360 into {T13F2.2.1},{W08D2.4.1},{T13F2.1.3},{T13F2.1.1},{T13F2.1.2} 3123 CB6841_redo IV 9928664 1 C T 255 1.00 63 62 0 33 33 @TTtttTtTttTtttTTTtttTtTTtTTTttttt point 0 nongenic,nongenic -468 upstream,-469 upstream {F25H8.5a,F25H8.5b,F25H8.5c},{F25H8.5d} 3128 CB6841_redo IV 10000231 1 C T 255 1.00 63 62 0 26 26 @TttTttTtTtTttttTTTTTTttttt point 0 missense GGA->GAA[Gly->Glu] {C47E12.3} 3131 CB6841_redo IV 10055154 1 C T 255 1.00 63 62 0 30 30 @ttTTttttTTttTTtTTTtTTTTttTtTTt point 0 missense GAA->AAA[Glu->Lys] {T04B2.7} 5729 CB6841_redo IV 10112497 3 X X -1000 -999.99 -1000 -1000 7 -3 4 @,,,,,., indel -3 SNP none {uCE4-1092} 3134 CB6841_redo IV 10129224 1 C T 255 1.00 63 62 0 26 26 @TTTTTttTttTTTTTtTTttTtttTT point 0 nongenic,nongenic -21 upstream,-296 upstream {K08F4.3},{K08F4.2.1,K08F4.2.2} 3140 CB6841_redo IV 10363984 1 C T 255 1.00 63 62 0 23 23 @TTTtTTTTTTTtTTTTTTttTTt point 0 nongenic,nongenic,nongenic 527 into,692 into,695 downstream {R11A8.4.2},{R11A8.4.1},{R11A8.3} 3148 CB6841_redo IV 10483388 1 C T 255 1.00 63 62 0 18 18 @tTtTtttttTTTttTttT point 0 silent GAG->GAA[Glu->Glu] {F01D4.5a,F01D4.5b} 3149 CB6841_redo IV 10505065 1 C T 255 1.00 63 62 0 22 22 @tTttTTTTttTtttTtTTtTtT point 0 nongenic -3508 upstream {C02F4.2c} 3150 CB6841_redo IV 10527608 1 C A 255 1.00 63 62 0 18 18 @aaaAAAaaaaAAaAaaaA point 0 nongenic,nongenic,nongenic -3072 upstream,-3490 upstream,1530 into {T07G12.2},{C02F4.5},{T07G12.1} 3152 CB6841_redo IV 10563219 1 G A 255 1.00 63 62 0 24 24 @AAaaAaaaaAAaAAaAaAAaaAAa point 0 missense GGA->AGA[Gly->Arg] {T07G12.12} 3153 CB6841_redo IV 10719437 1 C T 255 1.00 63 62 0 41 41 @TtTtTtttTTtTttTtttTTTttTTTTTttttTttTttTtt point 0 silent GAC->GAT[Asp->Asp] {ZC168.1} 3154 CB6841_redo IV 10740896 1 C T 255 1.00 63 62 0 17 17 @TtTTtTTtTTtTtttTt point 0 nongenic,nongenic -2265 upstream,-3856 upstream {ZC168.6},{T25B9.3a} 3155 CB6841_redo IV 10741363 1 G C 255 1.00 63 62 0 32 32 @CCcCCCccCcCCccCccCcCCcCCCCccccCC point 0 nongenic,nongenic -2732 upstream,-3389 upstream {ZC168.6},{T25B9.3a} 3156 CB6841_redo IV 10878679 1 G A 254 1.00 63 62 0 12 12 @AAaaaaaAaaAa point 0 missense,SNP CGT->TGT[Arg->Cys],none {F13E9.6},{haw59179} 3158 CB6841_redo IV 10903202 1 C T 255 1.00 63 62 0 27 27 @tTTTTTtttTttTttttttTttTtTTt point 0 premature_stop TGG->TGA[Trp->stop] {ZK596.3} 3159 CB6841_redo IV 10943769 1 A G 82 9.44 63 62 10 245 255 @G,GGGGGGGGGGGG,GGGGGGGGgGGGggGGGGggGGGGGGgggggggGGGGGGGGggggGG,,GggggggggggggGGGGGggggggGG,GGGGGGGg point 0 nongenic 931 downstream {ZK593.9} 3160 CB6841_redo IV 10949976 1 A G 48 1.00 63 62 38 63 101 @,gggG.GGGG.GGGG,gGGgGGG,ggG,,.gG,,gg,GG,gggGG,,,g,,gGGg.ggGGGGg,GG,gG..,G..g.GGg,,g.g,,g..gg,.GG,,g point 0 silent AAA->AAG[Lys->Lys] {Y69E1A.2} 3161 CB6841_redo IV 10949985 1 C T 40 1.00 63 62 38 55 93 @TTT,ttT,,.tT,,tt,TT,tttTT,,,t,,tTTt.ttTTTTt,T,,tT..,T..t.TTt,,t.t,,t..tt,.TT,,tt.,Ttttttt,t,t point 0 silent CAC->CAT[His->His] {Y69E1A.2} 3162 CB6841_redo IV 10950402 1 G A 89 1.00 63 62 29 72 101 @AAA.A.AA,.Aa.AAaAAAaa.aAAA,Aa,aa,,...Aa.A..aaAAAaaaaaa,.A,,a.A,,Aaaaa,AA,,AAAAAaaAaAAaAA.aa.a,aaAAa point 0 silent,SNP GGG->GGA[Gly->Gly],none {Y69E1A.2},{uCE4-1131} 3163 CB6841_redo IV 10950911 1 A G 67 1.00 63 62 36 71 107 @G,GG,,GGGGG,g.,.g.,GG,GGg.Gg.G.,GG.gGGG.gGGGgGGgg.Gg,ggg.g,G,GGG,,gg,,g,.GGGGggG..,g,gggG,GgGG,,,,G point 0 silent GCA->GCG[Ala->Ala] {Y69E1A.2} 3173 CB6841_redo IV 11009137 1 G A 255 1.00 63 62 0 27 27 @AaAAaaaaAaaAaaAAaAAaAAAAAaa point 0 nongenic,nongenic -126 upstream,862 downstream {F13H10.6},{F13H10.2a} 3175 CB6841_redo IV 11071123 1 T C 255 1.38 63 62 0 255 255 @CCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCC point 0 SNP none {haw59203} 3176 CB6841_redo IV 11071124 1 T A 65 1.38 63 62 224 31 255 @,,,,,,,,,,,,,,,,,,A,,,,,,,,,,,,,...,,,,,,,,,,,,,,,,,,,,,,,,,......,,,,,A,,,,,,,,,,,,,,,,,,,,,...... point 0 nongenic 894 downstream {Y5F2A.3} 3205 CB6841_redo IV 11110659 1 C T 255 1.00 63 62 0 21 21 @TtTTTTTTtTttTTTTtTTTt point 0 missense CGC->CAC[Arg->His] {T05E11.1.1,T05E11.1.2} 3208 CB6841_redo IV 11180495 1 A G 255 1.00 63 62 0 36 36 @GGgggGgGgGgggGggGGGGGGGGGGGgGgGGgggg point 0 missense,SNP ATT->GTT[Ile->Val],none {R07H5.2a.1,R07H5.2a.2,R07H5.2b},{haw59219} 3214 CB6841_redo IV 11226288 1 C T 7 3.00 0 26 6 16 22 @TTtttT,t,ttt,,Tt,TTt,t point 0 missense CCA->TCA[Pro->Ser] {C29F4.1} 3215 CB6841_redo IV 11377312 1 G A 255 1.00 63 62 0 32 32 @aaaaaaaaaAAAAaAAAAAAaaaAAaaAaAAA point 0 silent ACG->ACA[Thr->Thr] {H02I12.1} 3217 CB6841_redo IV 11477716 1 G C 255 1.00 63 62 0 22 22 @cCCCCcCccccccccccccccc point 0 SNP none {pas4467,snp_C10C6[2]} 3218 CB6841_redo IV 11551952 1 A G 18 1.00 63 62 1 3 4 @GGg. point 0 nongenic -21 upstream {F12F6.9} 3223 CB6841_redo IV 11679687 1 G A 255 1.00 63 62 0 40 40 @AaAaaaAAAaAAAAAAAAAaAaAAaAAaAAAAaaaaAAaa point 0 missense GCT->GTT[Ala->Val] {ZK792.4a,ZK792.4b} 3224 CB6841_redo IV 11697068 1 G A 255 1.00 63 62 0 19 19 @AaAaAAaAAaAAaAaaAaa point 0 missense CCA->CTA[Pro->Leu] {T22B3.1} 3225 CB6841_redo IV 11800118 1 G A 255 1.00 63 62 0 22 22 @aaaAaaAaAaAAaaaAAAAAaA point 0 nongenic,nongenic -7555 upstream,940 into {H01G02.3a,H01G02.3b,H01G02.3c},{H01G02.2} 3228 CB6841_redo IV 12048852 1 A G 175 0.00 63 62 0 10 10 @GGGGGGGGGG point 0 nongenic,nongenic,nongenic -1971 upstream,615 into,979 downstream {T12G3.2b.2},{T12G3.4},{T12G3.8} 3229 CB6841_redo IV 12048854 1 A G 174 0.00 63 62 0 10 10 @GGGGGGGGGG point 0 nongenic,nongenic,nongenic -1973 upstream,617 into,977 downstream {T12G3.2b.2},{T12G3.4},{T12G3.8} 3230 CB6841_redo IV 12069459 1 G A 255 1.00 63 62 0 19 19 @aaAaaaAaaAAaAAaAaAA point 0 SNP none {haw59564} 3231 CB6841_redo IV 12092133 1 G A 255 1.00 63 62 0 15 15 @AaaaAAaAAaaAAaA point 0 missense TCA->TTA[Ser->Leu] {F11A10.3} 3232 CB6841_redo IV 12105545 1 A T 255 1.00 63 62 0 25 25 @TTtTTTttTTTtTttttttttTTTT point 0 three_prime_UTR none {F11A10.4} 3233 CB6841_redo IV 12138205 1 T C 182 3.62 63 62 0 11 11 @CCCCCCCCCCC point 0 nongenic,nongenic,nongenic -888 upstream,623 downstream,785 downstream {B0001.4},{B0001.8.1},{B0001.8.2,B0001.8.3} 3237 CB6841_redo IV 12201617 1 G A 255 1.00 63 62 0 29 29 @aaAaAAAaaAAAAAAAaAaAAAAAaaaaa point 0 nongenic,nongenic,nongenic -1600 upstream,-23312 upstream,671 into {F35G2.1a.2,F35G2.1b.3},{F20B10.1},{F35G2.1a.1} 3238 CB6841_redo IV 12239969 1 A C 165 2.00 63 62 0 6 6 @CCccCC point 0 nongenic -1048 upstream {Y39C12A.6} 3249 CB6841_redo IV 12334254 1 C A 255 1.00 63 62 0 21 21 @AaaaaAAaaaaaaAaaaaAAa point 0 nongenic,nongenic,nongenic -3294 upstream,-3393 upstream,316 into {F19B6.4},{F19B6.2a},{F19B6.1a,F19B6.1b} 3250 CB6841_redo IV 12334255 1 C A 255 1.00 63 62 0 21 21 @aaaaAAaaaaaaAaaaaAAaA point 0 nongenic,nongenic,nongenic -3293 upstream,-3394 upstream,315 into {F19B6.4},{F19B6.2a},{F19B6.1a,F19B6.1b} 3257 CB6841_redo IV 12393525 1 C A 255 1.00 63 62 0 29 29 @aAaAAAaaAAAaaAaAaAAaaaAAaAaaa point 0 missense,SNP ATG->ATT[Met->Ile],none {F28D1.9},{haw59770} 3259 CB6841_redo IV 12430402 1 A T 113 4.19 63 62 0 5 5 @ttttt point 0 nongenic,nongenic,nongenic,nongenic -1917 upstream,-2205 upstream,2078 into,2091 into {F08G5.4},{F08G5.7},{F08G5.5.2},{F08G5.5.1} 3265 CB6841_redo IV 12433585 1 T G 75 1.00 63 52 0 7 7 @aAAgGGg point 0 nongenic,nongenic -2210 upstream,978 into {F08G5.6},{F08G5.7} 3266 CB6841_redo IV 12451708 1 C A 34 1.00 63 62 3 6 9 @,,.Aaaaaa point 0 SNP none {uCE4-1182} 3272 CB6841_redo IV 12545902 1 C T 255 1.00 63 62 0 28 28 @tttTtTTTtTTTtTtTTTTTttttTTtT point 0 SNP none {haw59832} 3273 CB6841_redo IV 12564353 1 G A 255 1.00 63 62 0 34 34 @aAAAAAAAAaaaAaAaaaaaaAaaAaAAAAAaAA point 0 missense CCT->CTT[Pro->Leu] {K08E7.1.1,K08E7.1.2} 3274 CB6841_redo IV 12581671 1 C T 255 1.00 63 62 0 22 22 @tTTttttttttTTTttTtTTtt point 0 SNP none {haw59843} 3276 CB6841_redo IV 12697437 1 G C 255 1.00 63 62 0 26 26 @CccCCCCcCccccCcCCccCCccCCC point 0 SNP none {haw59886} 3282 CB6841_redo IV 12781072 1 A C 213 1.00 63 62 0 13 13 @CCCCCCCCcCCCC point 0 nongenic,nongenic,nongenic -23429 upstream,-7953 upstream,5870 into {C36H8.3.1},{F07C6.3},{ZK897.1} 3283 CB6841_redo IV 12979116 1 T C 255 1.00 63 62 0 23 23 @ccCCccccCcccCccCCCccCcc point 0 SNP none {haw60243} 3284 CB6841_redo IV 13042053 1 G A 255 1.00 63 62 0 24 24 @AaAAAAAAaaAAaaaaaaaaaAAA point 0 nongenic,nongenic -305 upstream,-3094 upstream {F49E11.3},{F49E11.2} 3285 CB6841_redo IV 13092702 1 G C 255 1.00 63 62 0 29 29 @CcCCCcCcCCccCccCcccccCccCcccc point 0 nongenic,nongenic,nongenic -1272 upstream,-1666 upstream,1111 into {C39E9.12.1,C39E9.12.2},{C39E9.9},{C39E9.11} 3286 CB6841_redo IV 13127459 1 T C 255 1.00 63 62 0 27 27 @CccCCcccCCcccccCCCCCcCCcCcc point 0 SNP none {haw60403} 3290 CB6841_redo IV 13188307 1 A C 7 1.00 63 38 5 7 12 @.,,,,cccccCC point 0 nongenic -1426 upstream {F58D2.2} 3291 CB6841_redo IV 13188308 1 C G 38 1.00 63 6 4 7 11 @,,,,gggggGG point 0 nongenic -1425 upstream {F58D2.2} 3292 CB6841_redo IV 13306050 1 G A 255 1.00 63 62 0 16 16 @AaaAAaaAaaaaaaaa point 0 SNP none {haw60614} 3297 CB6841_redo IV 13399335 1 G A 255 1.00 63 62 0 36 36 @aAAAAaaAaAaAAAaAAaAaAaaaaaaAaaaaAAAa point 0 silent ATC->ATT[Ile->Ile] {Y62E10A.14} 3298 CB6841_redo IV 13451972 1 T C 255 1.00 63 62 0 23 23 @cccCcCCcccCCcCccccccCcC point 0 SNP none {haw60794} 3311 CB6841_redo IV 13549411 1 T A 3 2.75 63 62 29 226 255 @,,.,,,,,....,.,..,.,AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAA.AAAAAAAAAAAAAAAAAAAAAA point 0 nongenic,nongenic,nongenic -1211 upstream,209 downstream,317 downstream {F52G2.3.1},{Y45F10B.13b},{Y45F10B.13a,Y45F10B.13c} 3313 CB6841_redo IV 13563245 1 G C 255 1.00 63 62 0 32 32 @cccCcCcCCccccccCCCCCcCCcCcCccCcc point 0 SNP none {haw60948} 3314 CB6841_redo IV 13563393 1 G T 255 1.00 63 62 0 27 27 @TTttTtTTttTTTTTtTTTTTTttTtt point 0 SNP none {haw60949} 3315 CB6841_redo IV 13567305 1 G A 255 1.00 63 62 0 35 35 @aAAaaAaAaaaaaAAaaaAaAAAAaAAAAaAaaaa point 0 missense GAG->AAG[Glu->Lys] {Y45F10B.10} 3318 CB6841_redo IV 13602476 1 T A 255 1.00 63 62 0 24 24 @aaaAaaaaAAaAAaAAaAAaAaaA point 0 SNP none {haw60978} 3319 CB6841_redo IV 13662115 1 T G 255 1.00 63 62 0 31 31 @GgGGGGGgGGGgGGgGGggGggGgGGGGGgG point 0 SNP,three_prime_UTR none,none {haw61075},{Y45F10C.2} 3320 CB6841_redo IV 13664987 1 C A 255 1.00 63 62 0 28 28 @aAAAaAaaaAaAaaaaAAaAAaAAAaaa point 0 nongenic,nongenic -829 upstream,348 downstream {Y45F10C.4},{Y45F10C.3} 3322 CB6841_redo IV 13694031 1 C T 255 1.00 63 62 0 25 25 @tTTttTTtttTttTTTTttTTTTtT point 0 nongenic -5268 upstream {T23G4.2} 3323 CB6841_redo IV 13695677 1 C G 255 1.00 63 62 0 19 19 @gGGGGgggGGgggggGggg point 0 nongenic -6914 upstream {T23G4.2} 3324 CB6841_redo IV 13695678 1 G C 255 1.00 63 62 0 21 21 @cCCCCcccCCcccccCcccCc point 0 nongenic -6915 upstream {T23G4.2} 161932 CB6841_redo IV 13764376 53 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered 201 bp upstream to 148 bp upstream (0 % of 474 codons) {Y45F10D.13a} 3326 CB6841_redo IV 13791000 1 C T 30 1.00 63 60 2 2 4 @.,tT point 0 missense CCG->TCG[Pro->Ser] {Y45F10D.7} 3327 CB6841_redo IV 13793476 1 A C 204 1.00 63 62 0 9 9 @CcCCCCCCc point 0 nongenic,nongenic -4787 upstream,2715 into {Y45F10D.9},{Y45F10D.7} 3329 CB6841_redo IV 13838595 1 G A 255 1.00 63 62 0 20 20 @aaAaaaAaaaAAAAaAaAAA point 0 nongenic,nongenic,nongenic,nongenic -15726 upstream,-2237 upstream,6085 into,6351 into {B0513.6},{H08M01.1},{H08M01.2a},{H08M01.2b} 3332 CB6841_redo IV 13955430 1 A T 255 1.00 63 62 0 24 24 @ttTtttTttttttTTTTttTtTTT point 0 nongenic,nongenic 2749 into,2874 into {C27H2.2c},{C27H2.2a} 3339 CB6841_redo IV 14268413 1 G T 45 1.00 63 12 3 8 11 @,,,TtTtTTtT point 0 nongenic,nongenic -18232 upstream,-8018 upstream {Y64G10A.8},{Y64G10A.6} 3340 CB6841_redo IV 14290181 1 G A 255 1.00 63 62 0 21 21 @AAaAAAaAAAaaaAAaAaAAA point 0 nongenic -5318 upstream {Y64G10A.11} 3341 CB6841_redo IV 14347514 1 C A 255 1.00 63 62 0 21 21 @aAAAAAaaaaaaaAaaaaaAA point 0 SNP none {haw62226} 3351 CB6841_redo IV 14481365 1 C G 12 1.00 63 0 0 4 4 @gggg point 0 nongenic -933 upstream {Y57G11A.4} 3357 CB6841_redo IV 14670517 1 T G 93 1.00 63 28 0 4 4 @GGGG point 0 nongenic,nongenic -12488 upstream,4586 into {Y57G11C.31},{Y57G11C.37} 3358 CB6841_redo IV 14684202 1 G T 253 1.00 63 62 0 15 15 @TTTTTTTTttTTTTt point 0 nongenic 1197 into {Y57G11C.31} 3359 CB6841_redo IV 14691766 1 G A 255 1.00 63 62 0 23 23 @AaAAaAaAaAaaaaAAAAAAAAA point 0 SNP none {haw62984} 3362 CB6841_redo IV 14779404 1 C T 3 8.81 0 12 45 59 104 @T...,..,,,T....,.Tttt.tT,T.,.t,t.,.tT,TTt,TT,.,.TTTTT.TTT,..TT,TTTT.TTTTttt,TTTTTTTTTTttttttt,,,,TT point 0 nongenic,nongenic -2392 upstream,-4878 upstream {Y57G11C.8},{Y57G11C.51} 3365 CB6841_redo IV 14954070 1 G A 255 1.00 63 62 0 23 23 @AAAaaaAaaAAAaaaaAAaaAAA point 0 missense GAT->AAT[Asp->Asn] {Y41E3.22} 3366 CB6841_redo IV 14988674 1 G C 255 1.00 63 62 0 20 20 @ccCCcccCCCCCcCccCCCC point 0 nongenic,nongenic,nongenic -17532 upstream,-1931 upstream,7106 into {Y41E3.6},{Y41E3.2},{Y41E3.3} 3367 CB6841_redo IV 14992694 1 G T 255 1.00 63 62 0 21 21 @TttTtttTtttTtTTtTtTtT point 0 SNP none {haw63537} 3368 CB6841_redo IV 14998777 1 C T 255 1.00 63 62 0 16 16 @tTttTTTTTtTTTttt point 0 SNP none {haw63554} 3369 CB6841_redo IV 15043308 1 G A 255 1.00 63 62 0 33 33 @AaaAaaAaaaAaaaAAAaaAAAaAAAAaaAAaa point 0 missense ATG->ATA[Met->Ile] {Y41E3.11a,Y41E3.11b} 3384 CB6841_redo IV 15080122 1 T A 65 5.50 55 62 2 3 5 @..AAa point 0 nongenic -11237 upstream {Y41E3.15} 3398 CB6841_redo IV 15262737 1 G A 255 1.00 63 62 0 18 18 @AaAAaAAaAAaaAAAaaa point 0 ncRNA none {Y73F8A.234} 3399 CB6841_redo IV 15313323 1 A T 255 1.00 63 62 0 25 25 @TttTttTTTtttttTtTttTtTTtT point 0 SNP none {haw64171} 3402 CB6841_redo IV 15401393 1 T A 255 1.00 63 62 0 22 22 @AAaAaaAaAAAaaaAAaaaaAa point 0 nongenic 1101 into {Y73F8A.21} 3403 CB6841_redo IV 15401493 1 A C 255 1.00 63 62 0 22 22 @cCCcCcccCCcccCCccCCccc point 0 nongenic 1201 into {Y73F8A.21} 3416 CB6841_redo IV 15749705 1 A G 255 1.00 63 62 0 18 18 @TGGgGggTGgGgggggGg point 0 SNP none {haw64925} 3427 CB6841_redo IV 15798018 1 T G 39 2.44 63 8 0 7 7 @GgGGGgg point 0 nongenic 62 downstream {Y105C5A.22} 3428 CB6841_redo IV 15808808 1 C A 255 1.00 63 62 0 26 26 @aAAAAAaaaAaaaaaaaAaaaaAaAa point 0 nongenic,nongenic -11210 upstream,-9094 upstream {Y105C5A.23},{Y105C5A.22} 3431 CB6841_redo IV 15862850 1 C A 138 8.75 63 62 0 11 11 @AAAAAAAAAAA point 0 nongenic -7752 upstream {Y105C5B.1} 3432 CB6841_redo IV 15871052 1 T G 255 1.00 63 62 0 21 21 @GggGGGgGGGGggGGggggGg point 0 missense,SNP TTG->TGG[Leu->Trp],none {Y105C5B.1},{haw65169} 3438 CB6841_redo IV 15925394 1 A T 255 1.00 63 62 0 21 21 @tTTTttttTttTtTTTtTttt point 0 SNP none {haw65323} 3439 CB6841_redo IV 15935820 1 T C 255 1.00 63 62 1 25 26 @ccC,CcCCCcCCCCcCCCccCcCCcg point 0 SNP none {haw65337} 3440 CB6841_redo IV 15965556 1 T G 68 1.00 63 62 2 5 7 @,,ggggg point 0 missense TGG->GGG[Trp->Gly] {Y105C5B.18} 5752 CB6841_redo IV 15965558 2 X X -1000 -999.99 -1000 -1000 7 -6 1 @,,..... indel -2 frameshift,SNP none,none {Y105C5B.18},{uCE4-1508} 3441 CB6841_redo IV 16040857 1 A T 255 1.00 63 62 0 26 26 @TttTtTtttTtTTtTtTttTTTTTtt point 0 nongenic,nongenic -14050 upstream,-16384 upstream {Y105C5B.21a,Y105C5B.21b.1},{Y105C5B.23} 3442 CB6841_redo IV 16085619 1 C A 255 1.00 63 62 0 23 23 @AAaaaaaaaAaAAAAAAAAAaAA point 0 SNP none {haw65640} 3446 CB6841_redo IV 16199503 1 T C 255 1.00 63 62 0 27 27 @CcCcccCcCcCcCCccCCCCCcCCCcC point 0 silent CTT->CTC[Leu->Leu] {Y7A9A.1} 3460 CB6841_redo IV 16455760 1 C T 255 2.50 63 62 0 26 26 @tttttTTTttTTtTtttTTttttttt point 0 SNP none {haw66409,pas29567} 3465 CB6841_redo IV 16533636 1 T A 255 1.12 63 62 0 29 29 @AaaaaAaaaaAAAAaAaAAaaAAAAaaaA point 0 missense,SNP TTT->TTA[Phe->Leu],none {Y51H4A.6},{haw66558} 3476 CB6841_redo IV 16619813 1 C G 255 1.00 63 62 0 23 23 @GgGGgGGGGgGgGgGGgggGggG point 0 SNP none {haw66710,snp_Y51H4A[11]} 3477 CB6841_redo IV 16646588 1 T A 196 1.00 63 62 0 8 8 @AaAaAaAa point 0 SNP none {haw66770} 3485 CB6841_redo IV 16760578 1 C T 255 1.25 63 62 0 33 33 @ttTTTTttTTtTTtTTTtttttttTTtTtTtTt point 0 SNP none {haw66850} 3486 CB6841_redo IV 16786381 1 G T 255 1.00 63 62 0 12 12 @tTtTTTtTtttt point 0 SNP none {haw66890} 3489 CB6841_redo IV 16848636 1 G A 36 1.00 63 62 2 4 6 @.,AAAA point 0 SNP none {haw67023} 3490 CB6841_redo IV 16848870 1 A C 255 4.44 63 62 0 13 13 @cCCCcCCcCCCCC point 0 nongenic,nongenic,nongenic 1084 into,430 into,704 into {Y116A8A.9.2},{Y116A8A.9.3},{Y116A8A.9.1} 3496 CB6841_redo IV 16939349 1 T G 255 1.00 63 62 0 18 18 @GggGGGGGGGGgGGgGgg point 0 SNP none {haw67104} 3497 CB6841_redo IV 16945230 1 A G 168 1.81 63 62 8 26 34 @Gg.ggGGggGgG..gGGG.,gGgGGgGggGg,,. point 0 nongenic,nongenic,nongenic -1854 upstream,-6161 upstream,1583 into {Y116A8C.12.1,Y116A8C.12.2},{Y116A8C.10b.2},{Y116A8C.9} 3498 CB6841_redo IV 16957399 1 T A 170 1.00 63 62 0 7 7 @aaAaAAa point 0 nongenic 5361 into {Y116A8C.13} 3502 CB6841_redo IV 17086649 1 T C 255 1.00 63 62 0 18 18 @CCCCcCccCCcccCcccc point 0 missense CAT->CGT[His->Arg] {Y116A8C.26a} 3512 CB6841_redo IV 17156475 1 C G 3 1.00 63 2 1 3 4 @G.gg point 0 nongenic -5548 upstream {Y116A8C.40} 3513 CB6841_redo IV 17156477 1 C G 12 1.00 63 0 0 4 4 @gggg point 0 nongenic -5550 upstream {Y116A8C.40} 3522 CB6841_redo IV 17491300 1 G A 255 1.00 63 62 0 30 30 @AaaaaAaaaAAAaaaaaaaAAaaaAaaaaa point 0 SNP none {haw67744} 3523 CB6841_redo IV 17491319 1 C T 255 1.00 63 62 0 32 32 @TTtttttttTTtttTtttttTTttTTttTttt point 0 SNP none {haw67745} 3524 CB6841_redo IV 17492346 1 G A 69 1.00 63 62 3 5 8 @a.aaaa,, point 0 nongenic -1893 upstream {4R79.1a} 3525 CB6841_redo IV 17492347 1 G A 74 1.00 63 62 2 6 8 @aaaaaa,, point 0 nongenic -1894 upstream {4R79.1a} 5391 CB6841_redo MtDNA 5079 1 G A 255 1.00 63 62 0 255 255 @AAAAAAAAAAAAAAAAAaaaaaaaaaaAAAAAAAAAAAAAAAaaaAAAAAAAAAAAAaaaaAAAAAAAAaaaaaaaaaAAAAAAAAAAAAAaaaaaAAA point 0 silent GGG->GGA[Gly->Gly] {MTCE.21} 5392 CB6841_redo MtDNA 8429 1 A G 255 1.00 63 62 0 255 255 @GGGGGGGGGGGGGGgggggggggggGGGGGGGGGGGGgggggggggggGGGGGGGGGGGGGGGGgggggggggGggggggggGGGGGggggggggGGGG point 0 silent,three_prime_UTR GTA->GTG[Val->Val],none {MTCE.26},{MTCE.25} 5393 CB6841_redo MtDNA 12998 1 C T 255 1.00 63 62 2 253 255 @TTTTTTTTtttttttTTtttttTTTTTTTTttttttTTTTTtttttTTTTTTtttttttttTTTTTTTTttttttTTTTttttttttttttttttTT,t point 0 silent,three_prime_UTR GGC->GGT[Gly->Gly],none {MTCE.35},{MTCE.34} 3527 CB6841_redo V 705 1 C T 151 1.94 63 62 2 25 27 @ttTTtTT..TTttTTTTTtTTtTTTtt point 0 nongenic -774 upstream {cTel3X.1} 3528 CB6841_redo V 721 1 C G 204 1.69 63 62 1 21 22 @.GGggGGGGGgGGgGGGggggg point 0 nongenic -758 upstream {cTel3X.1} 3530 CB6841_redo V 46069 1 T G 111 1.00 63 62 0 5 5 @gGgGG point 0 nongenic,nongenic -2852 upstream,603 into {B0348.1},{B0348.2} 3531 CB6841_redo V 46079 1 C A 177 1.00 63 62 0 7 7 @AaAAaaa point 0 nongenic,nongenic -2842 upstream,613 into {B0348.1},{B0348.2} 3532 CB6841_redo V 46135 1 C G 255 1.00 63 62 0 13 13 @gGGgggGGgggGG point 0 SNP none {haw67774} 3533 CB6841_redo V 198833 1 A T 255 1.00 63 62 0 22 22 @tTtTTtTTtttTTtTTTTTtTt point 0 nongenic,nongenic -3894 upstream,1855 into {DC2.8},{Y108G3AL.7} 3534 CB6841_redo V 265179 1 C A 255 3.06 63 62 0 255 255 @AAAAAAAAAAAAAAAAAAAAAAAAAAAaAAAAAAaAAAAAAAAAAAAAAAaaaAAAAaaAAAAAAaAAAAaAAAAAAAAaAAAAAAAAAAAAAAAAAAA point 0 nongenic,nongenic -3127 upstream,-7197 upstream {Y58G8A.1},{R02C2.4} 3535 CB6841_redo V 265207 1 C A 255 1.44 63 62 1 254 255 @AAaAAAaaAAAAAaaaAAAAAAaaaaaaaAAAAAAAaaaaAAAAAAAaaaaaaaaaaaaaaaaaaaaaaAAaaaaaaaaaaaAAAAAAAAAAAAaaaaa point 0 SNP none {haw67964} 3536 CB6841_redo V 265223 1 T C 255 3.19 63 62 362 -107 255 @,,CCCcc,,.CCCccc,C,ccccc,CCcc,ccccc,C,,,Cccccc.ccccCCCC,C,CCCCCCccc..cccccC,,,,CCC,cc.c.ccccC,CCCCc point 0 nongenic,nongenic -3083 upstream,-7241 upstream {Y58G8A.1},{R02C2.4} 3537 CB6841_redo V 265542 1 G A 73 3.50 63 62 95 160 255 @,T,,,,At..a...t.a.A,TTTa.atttAT,,a....aa..a..aaAAAt..aaa.t..AA....a..AAA..a.t..a.aa...,.aa.......aT point 0 SNP none {haw67966} 3538 CB6841_redo V 265892 1 G T 25 4.12 31 6 41 160 201 @cttctttTTCTcttctctttttAT,tttt.tcc,Ccctctctttt,t.ttcTttcttcctT,ctttttttTcccttcCTtcc.t,tctc.cttttccT, point 0 nongenic,nongenic -2414 upstream,-7910 upstream {Y58G8A.1},{R02C2.4} 3539 CB6841_redo V 265967 1 A T 3 5.31 0 4 15 110 125 @,tttttttttGtgttttttttttt,tttGGT,ggttttttttT,GtttttttttttttTGTtt,ttttttgtttttttttttttttttttttttttttt point 0 nongenic,nongenic -2339 upstream,-7985 upstream {Y58G8A.1},{R02C2.4} 3540 CB6841_redo V 266107 1 T C 3 4.69 0 2 21 43 64 @,,.,C.,CcC..C.,,CC,,CC,C.CCCC.C,,,CCCCCCCcCCCcc.CCCCCcCCCCCc.CcC point 0 nongenic,nongenic -2199 upstream,-8125 upstream {Y58G8A.1},{R02C2.4} 3541 CB6841_redo V 266166 1 A C 3 3.88 0 0 178 77 255 @C,,C,,..c,,,,C,c..,,,,CC....CC,C,C,..CC,....C,C,C,,.c.c.CCCC..CCCCCC,C...C,,,C,Cc.cCC,,C,CC,C,CCC,C point 0 nongenic,nongenic -2140 upstream,-8184 upstream {Y58G8A.1},{R02C2.4} 3544 CB6841_redo V 266912 1 A T 3 6.25 25 2 24 40 64 @T,.,T,.TTTT,TTt.tTTTtTTtTTT,TTtCTccTTTTT,T,c,,C.T,.,t.t.,,,,,.tT point 0 nongenic,nongenic -1394 upstream,-8930 upstream {Y58G8A.1},{R02C2.4} 3546 CB6841_redo V 266965 1 T C 3 6.25 0 0 13 30 43 @CC,cccc.Ccccc,.,.c.c.cc,CCCc,c.Ccc.ccc.cccc point 0 nongenic,nongenic -1341 upstream,-8983 upstream {Y58G8A.1},{R02C2.4} 3547 CB6841_redo V 306867 1 G A 55 9.75 50 46 0 4 4 @aaaa point 0 nongenic,nongenic,nongenic -2152 upstream,1429 into,552 downstream {F33E11.3},{F33E11.6b},{F33E11.6a} 3548 CB6841_redo V 306925 1 G A 108 1.00 63 62 0 4 4 @AAAA point 0 nongenic,nongenic,nongenic -2210 upstream,1487 into,494 downstream {F33E11.3},{F33E11.6b},{F33E11.6a} 3549 CB6841_redo V 353703 1 A C 255 1.00 63 62 0 13 13 @CccCcCccccCCc point 0 nongenic,nongenic,nongenic -6063 upstream,1906 into,4914 into {T22H9.1},{T22H9.2b},{T22H9.2a} 3550 CB6841_redo V 361876 1 A G 255 1.00 63 62 0 13 13 @GgGGGggGGGGGg point 0 SNP none {haw68038} 3556 CB6841_redo V 650979 1 G C 3 1.00 63 2 1 3 4 @CCc. point 0 nongenic 858 downstream {F31F4.16} 3557 CB6841_redo V 650981 1 G C 14 1.00 63 0 0 4 4 @CCcc point 0 nongenic 856 downstream {F31F4.16} 3559 CB6841_redo V 826830 1 C G 255 1.00 63 62 0 28 28 @gGGGGGgggggGGGggggGGGgGgGGGg point 0 nongenic,nongenic,nongenic -3805 upstream,-6839 upstream,418 into {F41H8.4},{F41H8.1},{F41H8.2} 3561 CB6841_redo V 907030 1 C T 255 1.00 63 62 0 16 16 @ttTttTtTtTTTtttt point 0 SNP none {haw69383} 3564 CB6841_redo V 939128 1 G C 233 1.56 63 62 0 28 28 @CCCCCCCCCCCCCCCCCCcCcCCCccCc point 0 silent CTG->CTC[Leu->Leu] {Y50D4C.2} 3573 CB6841_redo V 1103096 1 T G 12 1.00 63 0 0 4 4 @gggg point 0 nongenic,nongenic -9863 upstream,953 into {Y50D4B.1},{Y50D4B.2} 3578 CB6841_redo V 1229149 1 A G 11 1.00 63 24 1 3 4 @,ggg point 0 nongenic,nongenic,nongenic -30961 upstream,5102 into,5240 into {C39F7.1},{C39F7.2a},{C39F7.2b} 3592 CB6841_redo V 1638167 1 T A 3 7.06 0 2 53 71 124 @,..A,.AA,,A,Aaa.AA.,aAa.aaAa.Aa,,a.aAaaaAAAaaA.aa,.A,aaaAAAAAaaaA,a.AAAaa.aAAaaA.a,aAaaAAAa,a.,..a. point 0 nongenic,nongenic -2141 upstream,1116 into {Y46H3D.2},{Y46H3D.3} 3593 CB6841_redo V 1638407 1 T A 3 7.19 0 0 37 57 94 @AA,,AaaA..,.A.aA,.A.AAAa,aaaa.aaAAa.aaAa,a,.AA.aa,AaA.aAAaaa..aaAAAaaa..,AAAAA.,...A,,a,,,.,a. point 0 nongenic,nongenic -1901 upstream,876 into {Y46H3D.2},{Y46H3D.3} 3594 CB6841_redo V 1638979 1 A G 255 3.06 63 62 85 170 255 @G,G,ggggggg.gg,,,GGgggg..g,G,GG,GG,ggggggg.GG,g.gGGG,G,,gggggggg,,,G,Gg..ggggg.gg....GG,GGGGGGGgggg point 0 nongenic,nongenic -1329 upstream,304 into {Y46H3D.2},{Y46H3D.3} 3601 CB6841_redo V 1714669 1 T C 19 2.31 50 36 4 5 9 @....CccCc point 0 nongenic,nongenic -2574 upstream,732 into {ZK697.5},{Y46H3C.1} 3602 CB6841_redo V 1916087 1 C T 255 1.31 63 62 0 25 25 @TtttTTtTTTttTTtttTTttTTtT point 0 nongenic,nongenic -233 upstream,886 downstream {Y32G9A.10},{Y32G9A.13} 3603 CB6841_redo V 1930646 1 G C 3 1.00 63 2 1 4 5 @CCCC, point 0 nongenic,nongenic,nongenic -14309 upstream,-5080 upstream,731 into {T06A1.4},{T06A1.1},{T06A1.5} 5758 CB6841_redo V 2019954 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @...AA indel 0 nongenic,nongenic -2658 upstream,-3415 upstream {F59A7.5b},{F59A7.2} 3607 CB6841_redo V 2255011 1 G A 238 1.50 63 62 0 12 12 @AAAAAAaAAaAA point 0 nongenic -407 upstream {F41B5.8} 3623 CB6841_redo V 2381085 1 G A 17 2.00 0 4 0 6 6 @Aaaaaa point 0 nongenic,nongenic -1147 upstream,-1579 upstream {Y19D10A.5},{Y19D10A.12} 3624 CB6841_redo V 2381091 1 C A 13 2.00 0 2 0 5 5 @aaaaa point 0 nongenic,nongenic -1141 upstream,-1585 upstream {Y19D10A.5},{Y19D10A.12} 3625 CB6841_redo V 2381092 1 C A 13 2.00 0 2 0 5 5 @aaaaa point 0 nongenic,nongenic -1140 upstream,-1586 upstream {Y19D10A.5},{Y19D10A.12} 3626 CB6841_redo V 2381093 1 G A 15 2.00 0 12 0 6 6 @aaaaaa point 0 nongenic,nongenic -1139 upstream,-1587 upstream {Y19D10A.5},{Y19D10A.12} 3636 CB6841_redo V 2487172 1 A C 3 2.00 0 2 4 5 9 @,..ccc,cc point 0 missense GTG->GGG[Val->Gly] {C01B4.9} 3659 CB6841_redo V 2578146 1 G C 172 1.00 63 62 0 12 12 @ccCCccCcccCc point 0 nongenic,nongenic -2725 upstream,244 into {C29G2.3},{C29G2.4} 3663 CB6841_redo V 2635077 1 G C 3 4.50 50 2 1 3 4 @C.cc point 0 nongenic,nongenic -3642 upstream,3002 into {W02H5.2},{W02H5.10} 3665 CB6841_redo V 2646142 1 G A 255 1.00 63 62 0 16 16 @aaAAaaaAaAaAaaAA point 0 missense GAC->AAC[Asp->Asn] {W02H5.1} 3667 CB6841_redo V 2650067 1 A T 124 1.00 63 62 0 5 5 @tttTT point 0 nongenic,nongenic -7964 upstream,2590 into {W02G9.5},{W02H5.8} 3684 CB6841_redo V 3017813 1 A G 255 5.12 63 62 0 29 29 @ggTggggggGGGGgGgGGGGGggggggGg point 0 nongenic 546 downstream {K12D9.14} 3688 CB6841_redo V 3188022 1 T G 14 1.00 63 0 0 4 4 @Gggg point 0 nongenic -326 upstream {Y73C8B.4} 3690 CB6841_redo V 3188027 1 C G 3 1.00 63 10 0 5 5 @ggagg point 0 nongenic -321 upstream {Y73C8B.4} 3694 CB6841_redo V 3276306 1 A C 3 1.00 63 62 2 3 5 @CCC,. point 0 nongenic,nongenic 196 downstream,778 downstream {T28A11.3},{T28A11.21} 3696 CB6841_redo V 3587035 1 A C 31 1.00 63 62 5 7 12 @CCCCccc,,... point 0 missense ATC->CTC[Ile->Leu] {T22F3.2a,T22F3.2b} 3697 CB6841_redo V 3615042 1 C A 255 1.00 63 62 0 31 31 @AAAaAAAaaaaaaAAaAaaAaAAAaaaAaaA point 0 nongenic,nongenic -503 upstream,-539 upstream {T22F3.11b},{T22F3.11a} 3709 CB6841_redo V 4000230 1 C T 255 1.00 63 62 0 19 19 @TTttttTTTtttTTTtTtT point 0 missense GTC->ATC[Val->Ile] {K09D9.11} 3711 CB6841_redo V 4164869 1 A C 255 1.00 63 62 0 26 26 @cccccCcCCCcCccccCcCCcCcccC point 0 missense ATT->CTT[Ile->Leu] {Y45G5AM.3} 3714 CB6841_redo V 4257405 1 C T 255 1.00 63 62 0 23 23 @ttttTTttTTTtttTTTTTttTt point 0 nongenic,nongenic -844 upstream,537 downstream {ZC142.2},{F47D2.3} 3716 CB6841_redo V 4321387 1 T A 128 1.00 63 52 0 6 6 @AAAaAa point 0 nongenic,nongenic,nongenic -2060 upstream,-5728 upstream,954 into {ZC132.9},{D2063.1},{R02D1.1} 3717 CB6841_redo V 4321389 1 A T 52 1.00 63 62 2 4 6 @TTtT., point 0 nongenic,nongenic,nongenic -2062 upstream,-5726 upstream,956 into {ZC132.9},{D2063.1},{R02D1.1} 3718 CB6841_redo V 4329455 1 A C 255 1.00 63 62 0 15 15 @CcCcCCcCcccCCCC point 0 SNP none {haw75410} 3719 CB6841_redo V 4343578 1 A C 187 7.06 63 62 0 16 16 @CCCCCCCCCCCCCCCC point 0 nongenic,nongenic -2281 upstream,2154 into {D2063.3a.1},{F32D1.1} 3720 CB6841_redo V 4447836 1 C G 255 1.69 63 62 0 15 15 @GGggGGGGGgggggg point 0 nongenic,nongenic -4760 upstream,2706 into {Y47D7A.16},{Y47D7A.14} 3724 CB6841_redo V 4571688 1 A G 255 1.00 63 62 0 19 19 @GggGggGgggGgggGGGGg point 0 nongenic,nongenic -1649 upstream,560 into {Y61A9LA.8.1},{Y61A9LA.3a,Y61A9LA.3b,Y61A9LA.3c} 3725 CB6841_redo V 4597289 1 A G 255 1.00 63 62 1 21 22 @GgGGggGggGGGggG.GGGGGG point 0 SNP none {haw75689} 3726 CB6841_redo V 4704362 1 T A 104 1.00 63 62 2 6 8 @.,aAAaaa point 0 nongenic,nongenic -3896 upstream,-6551 upstream {ZC266.1},{F39G3.6} 3728 CB6841_redo V 4835257 1 C T 255 1.00 63 62 0 24 24 @ttTTTttTttttTTtttttttTtT point 0 nongenic,nongenic,nongenic,nongenic,nongenic -690 upstream,750 into,751 into,759 downstream,765 downstream {C37H5.14},{C37H5.5.2},{C37H5.5.1},{C37H5.9c.1},{C37H5.9a,C37H5.9b,C37H5.9c.2,C37H5.9c.3} 3729 CB6841_redo V 4858444 1 C T 255 1.00 63 62 0 25 25 @tTTtTttttTTttTtttTtTTTttt point 0 missense,three_prime_UTR CGC->CAC[Arg->His],none {C37H5.13a},{C37H5.13b} 161936 CB6841_redo V 4909278 53 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 421 to 474 bp into {H23N18.1} 3736 CB6841_redo V 5058660 1 C T 255 1.00 63 62 0 37 37 @TttttttTTttttTtTttTTttTtTTTtTTTtttttT point 0 missense GCA->ACA[Ala->Thr] {K11D12.10a,K11D12.10b} 3740 CB6841_redo V 5117802 1 C T 255 1.00 63 62 0 29 29 @TtTtttTtTtTTTTtTTTTTTtTTtttTt point 0 missense AGC->AAC[Ser->Asn] {C04F5.9} 3742 CB6841_redo V 5124714 1 T A 255 1.00 63 62 0 15 15 @AAAaAAAaaaaaAaa point 0 SNP none {haw76186} 3743 CB6841_redo V 5144679 1 C T 255 1.00 63 62 0 26 26 @ttTtttTttttttTtttttTtttttT point 0 nongenic,nongenic -136 upstream,-895 upstream {F14F9.2},{F14F9.7} 3748 CB6841_redo V 5199287 1 C T 255 1.00 63 62 0 28 28 @TTtTTttTtttttTTTTTtTTTTTtTTt point 0 nongenic,nongenic -5177 upstream,-970 upstream {Y47A7.1},{Y47A7.2} 3749 CB6841_redo V 5246392 1 C T 255 1.00 63 62 0 32 32 @TTTTttTtTtTTttttttTttttTTTTtTttT point 0 nongenic,nongenic -3271 upstream,1633 into {B0238.1},{B0238.13} 3760 CB6841_redo V 5284688 1 T C 251 3.25 63 62 20 176 196 @C,.,,.C,C.c.c.,C.c,..CCCCCCCcCCCCCCCCCCcccCCCCCCCC,CcccCCCCCCCCCCCCCccccccccccccccCCCCCcccccccccCCC point 0 nongenic -6602 upstream {B0238.9} 3762 CB6841_redo V 5396555 1 G C 3 1.00 63 2 1 4 5 @CCC,C point 0 nongenic,nongenic -3422 upstream,-8786 upstream {C35A11.4},{C35A11.1} 3779 CB6841_redo V 5647604 1 C T 255 1.00 63 62 0 32 32 @TTTTTtTttTTTttTTtTTtTTtTTTttTTtT point 0 five_prime_UTR none {C14C11.4} 5762 CB6841_redo V 5689587 0 X X -1000 -999.99 -1000 -1000 1 1 2 @.tt indel 0 nongenic,nongenic -2221 upstream,527 downstream {F25B4.7},{F25B4.8a,F25B4.8b} 5764 CB6841_redo V 5845360 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @,,.,.ct indel 5 nongenic,nongenic,nongenic -343 downstream,-345 downstream,-899 upstream {F26F12.3a.2,F26F12.3b},{F26F12.3a.1},{F26F12.3c.1} 3781 CB6841_redo V 6036730 1 A C 38 1.12 63 62 4 6 10 @.,,.CCcccc point 0 nongenic,nongenic,nongenic -1932 upstream,-2750 upstream,610 into {F29G9.6a},{F29G9.1},{F29G9.7} 3783 CB6841_redo V 6048318 1 C A 255 1.00 63 62 0 29 29 @aaaaAAAaaAaaAaaAaaAaaAaaaAAAa point 0 SNP,three_prime_UTR none,none {haw77329},{R01B10.5.1} 3784 CB6841_redo V 6052074 1 T C 255 1.00 63 62 0 21 21 @cCcCcCCCCccCcCCCCcccc point 0 SNP none {haw77333} 3785 CB6841_redo V 6070764 1 C G 16 5.12 0 14 0 8 8 @gggggggg point 0 nongenic,nongenic -25246 upstream,-712 upstream {Y38A10A.7},{Y38A10A.4} 3823 CB6841_redo V 6172858 1 T C 3 3.31 0 2 12 33 45 @CCC.,..CC,CC.c...cCCcCCCCCCcCcCC.CCCC.CC.CcCC point 0 silent CAA->CAG[Gln->Gln] {W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g} 3824 CB6841_redo V 6177079 1 C A 98 1.75 31 42 0 8 8 @aaaaaAaa point 0 silent GTG->GTT[Val->Val] {W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g} 3826 CB6841_redo V 6178815 1 T C 3 7.69 0 26 6 7 13 @cC,,..,,ccccc point 0 missense ATT->GTT[Ile->Val] {W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g} 3827 CB6841_redo V 6179973 1 C T 3 9.25 0 2 6 12 18 @,,,,T,T.TTtTTTttTT point 0 missense GCA->ACA[Ala->Thr] {W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g} 3828 CB6841_redo V 6179975 1 A T 3 8.25 0 2 6 12 18 @,,,T,T.TTtTTTttTT, point 0 missense CTT->CAT[Leu->His] {W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g} 3829 CB6841_redo V 6243607 1 C T 255 1.00 63 62 0 28 28 @TtTTTttTttttTtTtttTTtTTTTTTt point 0 nongenic -5547 upstream {K08B12.2a,K08B12.2b} 3830 CB6841_redo V 6258825 1 C T 255 1.00 63 62 0 26 26 @ttTTTTtTTTtttTtTTTTtTTtTTt point 0 missense GTC->ATC[Val->Ile] {K08B12.5.1,K08B12.5.2} 3831 CB6841_redo V 6302463 1 A G 255 1.62 63 62 0 20 20 @GgGGGgGggGggggggGggg point 0 nongenic,nongenic -1318 upstream,-3026 upstream {K12B6.1},{K12B6.7} 3833 CB6841_redo V 6514064 1 C T 255 1.00 63 62 0 28 28 @tTTTttTTTttttTTTTTTTTTTtTTtT point 0 nongenic,nongenic,nongenic -732 upstream,-734 upstream,1160 into {F46E10.9.1},{F46E10.9.3},{F46E10.9.2} 3834 CB6841_redo V 6611989 1 C T 255 1.00 63 62 0 27 27 @TtTTttTTTTttTtTttTTTTTTTttT point 0 nongenic,nongenic,nongenic -2667 upstream,-842 upstream,-847 upstream {F44C4.3},{F44C4.4b.1},{F44C4.4a,F44C4.4b.2} 3835 CB6841_redo V 6694657 1 C T 255 1.00 63 62 0 26 26 @TttTtTTtTTTtttTTTtttTTttTt point 0 five_prime_UTR none {W02F12.8} 3837 CB6841_redo V 6715106 1 C T 255 1.00 63 62 0 18 18 @tTttttTttTTttTtTTt point 0 nongenic -4526 upstream {W02F12.6} 3838 CB6841_redo V 6781548 1 C T 43 1.00 63 42 3 6 9 @ttttTT,., point 0 nongenic -1864 upstream {ZC404.7} 3839 CB6841_redo V 6854614 1 C T 255 1.00 63 62 0 32 32 @tTTtTtttTttTTTtttTtttTttTtttTTtT point 0 missense GGG->AGG[Gly->Arg] {C55H1.2} 3842 CB6841_redo V 6889636 1 C G 255 1.00 63 62 0 17 17 @ggGgggggGgGGggggg point 0 silent GCC->GCG[Ala->Ala] {K11C4.3b} 3843 CB6841_redo V 6889637 1 G C 255 1.00 63 62 0 18 18 @ccCcccccCcCCcccccC point 0 missense GCA->CCA[Ala->Pro] {K11C4.3b} 3845 CB6841_redo V 6941197 1 T C 3 6.50 0 0 6 35 41 @CCC,.CCcCCCCCCcccCCcCCC,CCCCC.cC.cC,cCccc point 0 nongenic -5353 upstream {Y57E12B.3} 3850 CB6841_redo V 6942940 1 A G 5 6.69 31 18 14 23 37 @.G,,,,gg,,g,ggGggGg.,.gggggggG.gg.G,g point 0 nongenic -7096 upstream {Y57E12B.3} 3851 CB6841_redo V 6943050 1 A C 3 7.00 0 22 14 15 29 @CC.C.Cccc.CCCCc,c.,.,C,.c,,.. point 0 nongenic -7206 upstream {Y57E12B.3} 3854 CB6841_redo V 6943642 1 A T 5 7.81 0 26 8 11 19 @...Tt..tTTTT,.ttt.T point 0 nongenic -7798 upstream {Y57E12B.3} 3856 CB6841_redo V 6956711 1 T C 255 1.00 63 62 0 21 21 @cCCccCCCcccCcCCccccCc point 0 five_prime_UTR,missense none,CTA->CCA[Leu->Pro] {T07H8.4f.2,T07H8.4f.3},{T07H8.4a,T07H8.4b,T07H8.4c,T07H8.4d.1,T07H8.4d.2,T07H8.4h.1,T07H8.4h.2,T07H8.4i,T07H8.4j} 3857 CB6841_redo V 6956743 1 C G 255 1.00 63 62 0 22 22 @ggggGgggGGgGgGGGgGggGG point 0 five_prime_UTR,missense none,CGC->GGC[Arg->Gly] {T07H8.4f.1,T07H8.4f.2,T07H8.4f.3},{T07H8.4a,T07H8.4b,T07H8.4c,T07H8.4d.1,T07H8.4d.2,T07H8.4h.1,T07H8.4h.2,T07H8.4i,T07H8.4j} 3858 CB6841_redo V 6956744 1 G C 255 1.00 63 62 0 21 21 @cccCcccCCcCcCCCcCccCC point 0 five_prime_UTR,missense none,CGC->CCC[Arg->Pro] {T07H8.4f.1,T07H8.4f.2,T07H8.4f.3},{T07H8.4a,T07H8.4b,T07H8.4c,T07H8.4d.1,T07H8.4d.2,T07H8.4h.1,T07H8.4h.2,T07H8.4i,T07H8.4j} 3867 CB6841_redo V 7245105 1 C G 255 1.00 63 62 0 20 20 @GGGGgGGGgGgggGgGgggg point 0 SNP none {haw78505} 3868 CB6841_redo V 7353073 1 C T 255 1.00 63 62 0 34 34 @tTTtttTTttTtTTTtTTtTTTtTtTTTTtTTtt point 0 five_prime_UTR none {C03G6.7} 3869 CB6841_redo V 7386791 1 C A 42 1.00 63 22 0 5 5 @AAAaa point 0 nongenic -691 upstream {C03G6.19} 3870 CB6841_redo V 7403427 1 A G 255 1.00 63 62 0 27 27 @GgGGgggGGGgGggggGgGgggGgggg point 0 silent,SNP GAA->GAG[Glu->Glu],none {R13D7.3},{uCE5-1535} 3871 CB6841_redo V 7477764 1 C T 255 1.00 63 62 0 37 37 @tTtTtttTTtTTtTttTTttTTtTttTTTttTtTttT point 0 missense GCA->ACA[Ala->Thr] {C18B10.7} 3872 CB6841_redo V 7478115 1 C T 255 1.00 63 62 0 29 29 @TtttTtttttTtTtTTtttTTTtTTTtTt point 0 missense GGG->GAG[Gly->Glu] {C18B10.7} 3873 CB6841_redo V 7546483 1 C T 255 1.00 63 62 0 27 27 @TttttTtTtTtttttttTTttTTTtTt point 0 three_prime_UTR none {C54F6.14} 3874 CB6841_redo V 7546600 1 G A 255 1.00 63 62 0 23 23 @AAAAaAaaaaaaaAAaaaAaaAa point 0 missense,SNP CAC->TAC[His->Tyr],none {C54F6.14},{uCE5-1545} 3875 CB6841_redo V 7718046 1 G C 7 1.00 63 2 1 6 7 @CCCCCC. point 0 nongenic -745 upstream {ZK105.5} 3876 CB6841_redo V 7718048 1 G C 3 1.00 63 2 3 4 7 @CCC,C,. point 0 nongenic -747 upstream {ZK105.5} 3877 CB6841_redo V 7718051 1 T C 3 1.00 63 0 0 8 8 @CCCCCCcg point 0 nongenic -750 upstream {ZK105.5} 3878 CB6841_redo V 7718054 1 G C 3 1.00 63 0 1 5 6 @CCCC.a point 0 nongenic -753 upstream {ZK105.5} 5767 CB6841_redo V 7725861 0 X X -1000 -999.99 -1000 -1000 4 0 4 @,,..tTTt indel 0 nongenic,nongenic,nongenic -1814 upstream,-231 downstream,-2933 upstream {ZK105.6},{ZK105.8},{Y97E10C.1.1} 3879 CB6841_redo V 7860214 1 C A 255 5.06 63 62 0 25 25 @aaAAaAaaAaAAaaAgaaaaaaaaA point 0 nongenic,nongenic 323 downstream,510 downstream {C37C3.1a},{C37C3.1b} 3880 CB6841_redo V 7860248 1 A T 255 6.25 63 62 0 19 19 @tttttttttTTtTTttTtt point 0 nongenic,nongenic 357 downstream,544 downstream {C37C3.1a},{C37C3.1b} 3892 CB6841_redo V 8056170 1 G T 193 5.88 63 62 0 10 10 @tttttTtttt point 0 nongenic,nongenic -235 upstream,165 downstream {ZC513.1},{ZC513.2} 3894 CB6841_redo V 8205482 1 G A 255 1.00 63 62 0 38 38 @aaaaAAaaAaaaaaaaAAAaAAaAAAAaAAAaaAAaaa point 0 missense GAG->AAG[Glu->Lys] {K07C11.4} 5768 CB6841_redo V 8233594 0 X X -1000 -999.99 -1000 -1000 1 0 1 @,cc indel 0 nongenic,nongenic,nongenic -275 upstream,-4737 downstream,-646 downstream {C16D9.2c},{C16D9.2a},{C16D9.2b} 3895 CB6841_redo V 8276294 1 T C 78 1.00 63 24 1 5 6 @,cCcCc point 0 nongenic 557 downstream {F21F8.2} 3896 CB6841_redo V 8276295 1 C T 82 1.00 63 24 1 6 7 @,tTtTtt point 0 nongenic 558 downstream {F21F8.2} 3899 CB6841_redo V 8321262 1 C T 255 1.00 63 62 0 18 18 @TtTtTttttTTTTTTttT point 0 nongenic 1581 into {W02D7.10} 3910 CB6841_redo V 8330581 1 A C 32 8.25 63 62 8 9 17 @C.,,C...CCCC.CCC. point 0 nongenic,nongenic -4087 upstream,-6055 upstream {W02D7.9},{C08D8.2a,C08D8.2b} 3911 CB6841_redo V 8371420 1 C T 255 1.00 63 62 0 23 23 @tTTtTTtTttTTTTtTtttTTTt point 0 nongenic 428 into {F38E1.5} 3912 CB6841_redo V 8399042 1 C T 255 1.00 63 62 0 28 28 @tTtTttTTtttTttTtTTttTttTtTTT point 0 missense GGT->GAT[Gly->Asp] {F52E1.9} 3913 CB6841_redo V 8433375 1 C T 255 1.00 63 62 0 28 28 @TttTtTtTTtTttTtTTtTTttTTtTtT point 0 missense GGA->AGA[Gly->Arg] {F52E1.13a,F52E1.13c,F52E1.13d} 3918 CB6841_redo V 8704501 1 C T 255 1.00 63 62 0 17 17 @TTtttttttttTttTTT point 0 nongenic 912 downstream {ZC178.2} 3927 CB6841_redo V 8751074 1 A T 38 5.00 63 24 1 4 5 @.tttt point 0 nongenic,nongenic -2597 upstream,1970 into {B0507.5},{B0507.6} 3928 CB6841_redo V 8751076 1 G A 82 5.00 63 38 1 5 6 @.aaaaa point 0 nongenic,nongenic -2595 upstream,1968 into {B0507.5},{B0507.6} 3940 CB6841_redo V 8942804 1 C T 255 1.00 63 62 0 22 22 @TtTTttTtTTttttTtTTTttt point 0 five_prime_UTR none {T19A5.3b} 3941 CB6841_redo V 8969823 1 T A 18 1.00 63 0 1 3 4 @AaA, point 0 SNP none {haw80786} 3943 CB6841_redo V 9162494 1 T G 255 2.19 63 62 0 20 20 @GgGGGgGgGGggGggGGGgG point 0 missense CAA->CCA[Gln->Pro] {B0222.7} 3944 CB6841_redo V 9246637 1 G A 255 1.00 63 62 0 32 32 @AAAaaaaaaaaAaaaaaaAaaaAaaAAAaaaa point 0 nongenic -302 upstream {F07C3.7} 3945 CB6841_redo V 9325916 1 G A 255 1.00 63 62 0 22 22 @aAaaAaaaaAaaAAaaaAAaaA point 0 missense ATG->ATA[Met->Ile] {F44A2.1a,F44A2.1b} 3948 CB6841_redo V 9343348 1 G A 255 1.00 63 62 0 26 26 @AaAAAaaAAAAaaaaaAAAAaaaaAA point 0 three_prime_UTR none {K07B1.6a.1,K07B1.6a.2,K07B1.6b.1} 3949 CB6841_redo V 9376379 1 G T 255 1.00 63 62 0 29 29 @TTtTTtTTTtttTtTttttTTTTtttttT point 0 missense,SNP CAA->AAA[Gln->Lys],none {E02C12.10},{haw80948} 3951 CB6841_redo V 9426273 1 G C 14 1.00 63 0 0 4 4 @Cccc point 0 nongenic,nongenic,nongenic -537 upstream,-583 upstream,551 downstream {F36D4.5b.1},{F36D4.5a},{F36D4.6} 3952 CB6841_redo V 9426274 1 A C 41 1.00 63 0 0 4 4 @Cccc point 0 nongenic,nongenic,nongenic -538 upstream,-584 upstream,550 downstream {F36D4.5b.1},{F36D4.5a},{F36D4.6} 3955 CB6841_redo V 9481866 1 G A 255 1.00 63 62 0 23 23 @AaaaaaaAaaAAAaAaaaaAaaA point 0 nongenic,nongenic -3871 upstream,-755 upstream {K06A4.2},{K06A4.6} 3956 CB6841_redo V 9537615 1 A C 255 1.12 63 62 0 22 22 @CCCCcCcCCcCccCcccCcCCC point 0 nongenic,nongenic 443 downstream,85 downstream {C50F4.12},{C50F4.4} 3958 CB6841_redo V 9603657 1 G T 163 8.50 55 62 2 14 16 @,T.ttTTTTTtTTTtT point 0 nongenic,nongenic -4877 upstream,-6117 upstream {K09G1.4a,K09G1.4b},{K09G1.3} 3959 CB6841_redo V 9603798 1 A G 78 3.75 50 62 5 6 11 @.G,,,G,gGGG point 0 nongenic,nongenic -4736 upstream,-6258 upstream {K09G1.4a,K09G1.4b},{K09G1.3} 3962 CB6841_redo V 9662867 1 T C 225 1.00 63 62 0 18 18 @CCCcCCCCCCCCCCCCCC point 0 nongenic,nongenic -1279 upstream,-3805 upstream {B0331.2},{ZK287.1} 3967 CB6841_redo V 9663159 1 T G 255 1.00 63 62 0 19 19 @gGGGggGgGGgGGGGGgGg point 0 SNP none {haw81125} 3968 CB6841_redo V 9707449 1 T C 255 1.00 63 62 0 31 31 @CcCcccCCcCCcCCccccCccCCCcCccccc point 0 SNP none {haw81144} 3971 CB6841_redo V 9821687 1 G A 255 1.00 63 62 0 23 23 @aaaaaAaAAAaAAaaaAAAAaaa point 0 missense CCT->CTT[Pro->Leu] {C50C10.6} 3972 CB6841_redo V 9852549 1 G A 255 1.00 63 62 0 29 29 @AaAAAAAAAAaaAAaAaAaaaAAaAaAAa point 0 missense CCA->TCA[Pro->Ser] {R07B5.8a.1,R07B5.8a.2,R07B5.8b.1,R07B5.8b.2} 3973 CB6841_redo V 9871228 1 G A 255 2.00 63 62 0 30 30 @aaaAaAaAAaAAaaaaaAaAAaAAAaaAaA point 0 missense CTT->TTT[Leu->Phe] {T11A5.3} 3974 CB6841_redo V 9927293 1 T A 255 1.00 63 62 0 30 30 @aaaaaaaAaAaAAaaAAaAAAAAaAAaAaa point 0 SNP none {haw81196} 3975 CB6841_redo V 9928614 1 C T 255 1.00 63 62 0 17 17 @TTTTTTTTTTttttTtt point 0 silent,SNP CAG->CAA[Gln->Gln],none {T07C12.12},{haw81197} 3976 CB6841_redo V 9963280 1 G A 255 1.00 63 62 0 39 39 @AAAAaAaaaAAaAAaaaaaaaaaaAaAAAAaaaaAaaaa point 0 nongenic -833 upstream {T07C12.11} 3978 CB6841_redo V 10067797 1 A C 32 1.00 63 62 3 5 8 @.,.CcCcc point 0 nongenic 739 into {F57A8.4} 3981 CB6841_redo V 10269852 1 A G 3 7.69 63 0 1 5 6 @C.gggg point 0 nongenic,nongenic,nongenic -7217 upstream,-7945 upstream,434 into {Y22F5A.3b},{Y22F5A.4.1},{Y22F5A.3a} 3983 CB6841_redo V 10269857 1 C G 15 1.00 63 2 0 7 7 @ggggggg point 0 nongenic,nongenic,nongenic -7222 upstream,-7940 upstream,429 into {Y22F5A.3b},{Y22F5A.4.1},{Y22F5A.3a} 3984 CB6841_redo V 10336188 1 A G 5 1.00 63 62 2 2 4 @,,gG point 0 nongenic,nongenic,nongenic -3284 upstream,-4104 upstream,751 into {K07C5.2},{B0024.14b},{K07C5.1} 3985 CB6841_redo V 10397712 1 C A 255 1.00 63 62 0 19 19 @aAaaaaAAAaAAaAaAaAa point 0 SNP none {haw81401} 3986 CB6841_redo V 10444115 1 A T 255 1.00 63 62 0 20 20 @TttTtttTTttTtttTTTTT point 0 SNP none {haw81421} 3988 CB6841_redo V 10449487 1 T C 221 6.56 63 62 31 132 163 @C,.cCC.CCcc,,CC,CCCCc.CCCc.ccCcC,CcccCC.cccCCCCc,C,,C.C,C,C,C,ccCc..c.cCc.C,C,C.CC,cccCCCcCCCCCCccC point 0 nongenic 386 downstream {Y32F6A.6} 4004 CB6841_redo V 10621928 1 C A 255 1.00 63 62 0 29 29 @aaaAAaaAAAAaaAAAAaAAAAaAaaaAA point 0 SNP none {haw81482} 4005 CB6841_redo V 10696346 1 A T 126 1.00 63 62 0 5 5 @TTttt point 0 nongenic -6178 upstream {C05A2.1} 4006 CB6841_redo V 10893331 1 A C 255 1.00 63 62 0 26 26 @CCCCCccccCcCcccCCCCCcCCCCc point 0 SNP none {haw81672} 4016 CB6841_redo V 11012493 1 C G 117 1.00 63 62 1 5 6 @gggGG. point 0 nongenic -52 upstream {C13G3.1} 4017 CB6841_redo V 11025875 1 T A 70 1.00 63 50 0 4 4 @aAaa point 0 SNP none {haw81781} 4019 CB6841_redo V 11180409 1 G A 255 1.00 63 62 0 32 32 @AaAaAAaAAAaAaAAaaaaaAaaaAaAaaAAA point 0 SNP none {haw81856} 4029 CB6841_redo V 11687322 1 C T 255 1.00 63 62 0 21 21 @TtTTttTTTtTTtTTTTTttT point 0 SNP none {haw82144} 4030 CB6841_redo V 11719886 1 C T 255 9.25 63 62 0 18 18 @tttTTtTTttTTTtTTTT point 0 nongenic,nongenic -4003 upstream,1819 into {W05E10.4},{B0240.3} 4032 CB6841_redo V 11880684 1 C T 255 1.00 63 62 0 25 25 @TtTTTtttTTttTTTttTTTTTttT point 0 nongenic,nongenic -7529 upstream,639 into {K12G11.3},{K12G11.2} 4033 CB6841_redo V 11883417 1 A G 255 1.00 63 62 0 37 37 @GGGGGGGggGGGGGGgGggGGggGggGGGgggGGggG point 0 SNP none {haw82276} 4035 CB6841_redo V 12081965 1 C T 255 1.00 63 62 0 15 15 @tttttTttttTtttT point 0 missense GAT->AAT[Asp->Asn] {R07B7.8} 5786 CB6841_redo V 12166926 0 X X -1000 -999.99 -1000 -1000 4 0 4 @,.,,cccC indel 0 nongenic,nongenic -242 downstream,285 downstream {ZK863.2},{VC27A7L.1} 4041 CB6841_redo V 12579466 1 G T 255 1.00 63 62 0 20 20 @tttTttTTTTtTTttTTtTT point 0 SNP none {haw83048} 4042 CB6841_redo V 12864064 1 A T 235 1.50 63 62 0 17 17 @tTttTTtTctTtTgTTT point 0 nongenic,nongenic,nongenic,nongenic -1829 upstream,251 downstream,300 into,558 downstream {T07F10.5},{T07F10.1a},{T07F10.6},{T07F10.1b} 4043 CB6841_redo V 12864636 1 A G 29 1.56 63 62 5 12 17 @G.GG...GGGGG.GGGG point 0 nongenic,nongenic,nongenic -1257 upstream,823 downstream,872 into {T07F10.5},{T07F10.1a},{T07F10.6} 4044 CB6841_redo V 12864640 1 C G 56 1.38 63 62 4 11 15 @G...GGGGG.GGGGG point 0 nongenic,nongenic,nongenic -1253 upstream,827 downstream,876 into {T07F10.5},{T07F10.1a},{T07F10.6} 5789 CB6841_redo V 12867714 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,.GGGG indel 0 nongenic,nongenic -184 downstream,292 downstream {T07F10.6},{T07F10.3} 4045 CB6841_redo V 12915568 1 A T 255 1.00 63 62 0 31 31 @TtttTttTtTttttTtTttTtTtTTtttTtT point 0 SNP none {haw83378} 4046 CB6841_redo V 12919477 1 A G 255 1.00 63 62 0 22 22 @GGGGgGgGggGgggGGgGgGGg point 0 SNP none {haw83380} 4047 CB6841_redo V 13162704 1 G A 34 1.00 63 2 3 5 8 @.,,aaaAa point 0 nongenic,nongenic,nongenic,nongenic,nongenic -4813 upstream,1238 into,3153 into,6057 into,7400 into {T09E8.1e},{T09E8.1a},{T09E8.1b},{T09E8.1f},{T09E8.1c} 4048 CB6841_redo V 13180097 1 C T 255 1.00 63 62 0 31 31 @tTTTTTTTTtttTTtTtTTttTtTTttTTtT point 0 three_prime_UTR none {T09E8.2.1} 4049 CB6841_redo V 13183405 1 T A 18 1.00 63 60 1 3 4 @,AAa point 0 nongenic,nongenic -2260 upstream,815 into {T09E8.5},{T09E8.4} 4050 CB6841_redo V 13183407 1 A T 61 1.00 63 18 0 4 4 @GTTt point 0 nongenic,nongenic -2258 upstream,813 into {T09E8.5},{T09E8.4} 4051 CB6841_redo V 13186025 1 C T 255 1.00 63 62 0 26 26 @TTTTtTTtTttTTTTttTTTttTTTt point 0 nongenic,nongenic -1805 upstream,360 into {T09E8.4},{T09E8.5} 4055 CB6841_redo V 13466076 1 G A 255 1.00 63 62 0 15 15 @AAaAaaaaaaaAAaA point 0 SNP none {haw83625} 4056 CB6841_redo V 13506487 1 C T 12 1.00 63 34 3 4 7 @,.,tttt point 0 nongenic,nongenic,nongenic -3761 upstream,281 into,5214 into {R11G10.1b.1},{R11G10.4},{R11G10.1a} 4060 CB6841_redo V 13539850 1 G T 231 1.00 63 62 0 11 11 @TtTTTttTTtt point 0 SNP none {haw83676} 4072 CB6841_redo V 13645924 1 T G 63 1.00 63 62 9 14 23 @,GGGG,CGGg,Ggg.,,G.g..g point 0 nongenic,nongenic -11720 upstream,942 downstream {H37A05.2},{H37A05.4} 4073 CB6841_redo V 13645955 1 T C 255 1.00 63 62 4 27 31 @CCCcccccccc,cCCccCcCCCcCCcC,C,, point 0 SNP none {haw83752} 4074 CB6841_redo V 13645978 1 C A 66 1.12 63 62 20 26 46 @.,a,,.a,aAAAaAAaA,A,,aa,,aA,A,a.a.,,AaA.AAaA., point 0 nongenic,nongenic -11774 upstream,888 downstream {H37A05.2},{H37A05.4} 4075 CB6841_redo V 13665874 1 T A 32 1.00 63 62 2 4 6 @Aaaa., point 0 nongenic,splice_donor 491 into,none {F58G11.2},{F58G11.2} 4076 CB6841_redo V 13706741 1 A G 18 1.00 63 56 1 3 4 @.GGg point 0 nongenic,nongenic,nongenic,nongenic,nongenic -4599 upstream,1333 into,1731 into,1831 into,601 into {T01D3.4},{T01D3.3a},{T01D3.3b.2},{T01D3.3b.1},{T01D3.2} 4077 CB6841_redo V 13717171 1 T C 255 1.00 63 62 0 28 28 @CCCccCcCCCcccCccCCCCcCCccCcC point 0 SNP none {haw83786} 4086 CB6841_redo V 13789894 1 A G 4 1.00 63 0 5 10 15 @GGC,,,G,GG,GGgg point 0 missense AGT->GGT[Ser->Gly] {F53C11.5b} 4088 CB6841_redo V 13886659 1 T C 255 1.00 63 62 0 28 28 @ccCCcCCcCcCCccCcCCCCcCcCCCCC point 0 SNP none {haw83916} 4089 CB6841_redo V 13888688 1 A G 255 1.00 63 62 0 27 27 @gGgGGGGGGGGGgGggGGgggGgGGGg point 0 SNP none {haw83918} 4090 CB6841_redo V 13931064 1 A T 255 1.00 63 62 0 19 19 @tTttTtTtTttttttTTtt point 0 missense,SNP TTA->TTT[Leu->Phe],none {C06B3.14},{haw83931} 4091 CB6841_redo V 13958673 1 A T 9 1.00 63 62 3 4 7 @.,,ttTT point 0 nongenic,nongenic -369 upstream,51 downstream {R10D12.10},{R10D12.11} 4094 CB6841_redo V 14125885 1 C G 3 1.00 63 0 1 3 4 @G,gg point 0 nongenic,nongenic,nongenic,nongenic 13105 into,3080 into,633 into,6449 into {H39E23.1a},{H39E23.1c},{H39E23.1d},{H39E23.1b} 4103 CB6841_redo V 14507580 1 C T 255 1.00 63 62 0 28 28 @tttttttTtttTTTTTtTtTTtTTtTtt point 0 nongenic,nongenic -22923 upstream,-651 upstream {R02D5.4},{R02D5.1} 4115 CB6841_redo V 14733448 1 G C 255 1.00 63 62 0 21 21 @CcccCcCCccCCCCcCCCcCc point 0 missense CTT->GTT[Leu->Val] {Y50E8A.4a,Y50E8A.4b,Y50E8A.4c} 4122 CB6841_redo V 14743838 1 T C 255 1.12 63 62 0 27 27 @cCCccCCCCCccCcCcCcccCCCcCCC point 0 nongenic -2532 upstream {Y50E8A.6} 4123 CB6841_redo V 14744051 1 T C 4 4.25 0 0 1 4 5 @Cccc. point 0 nongenic -2745 upstream {Y50E8A.6} 4125 CB6841_redo V 14744254 1 T G 3 2.31 0 4 6 9 15 @GG.GGGGGG.G,,., point 0 nongenic -2948 upstream {Y50E8A.6} 4128 CB6841_redo V 14744337 1 G C 162 2.19 63 62 0 19 19 @ccCCCcCcccCCCCcCcCc point 0 nongenic -3031 upstream {Y50E8A.6} 4130 CB6841_redo V 14744895 1 T A 183 1.00 63 62 0 11 11 @AAAAAAAAAAA point 0 nongenic,nongenic -3589 upstream,767 downstream {Y50E8A.6},{Y50E8A.7} 4143 CB6841_redo V 14755448 1 T A 3 2.81 0 14 2 4 6 @AAA,,a point 0 nongenic,nongenic -17887 upstream,-5011 upstream {Y50E8A.16},{Y50E8A.17} 4144 CB6841_redo V 14755555 1 A T 3 3.00 0 6 3 4 7 @..TTTT, point 0 nongenic,nongenic -17780 upstream,-5118 upstream {Y50E8A.16},{Y50E8A.17} 4171 CB6841_redo V 15294614 1 G C 19 1.38 63 0 1 4 5 @CCCC, point 0 nongenic -671 upstream {T10H4.2} 4174 CB6841_redo V 15403755 1 G A 255 1.00 63 62 0 35 35 @aAAaAaAAAAaAAaaAaaAaaAaaAaAaaaAAAaa point 0 nongenic,nongenic -1380 upstream,521 downstream {T06E6.7},{T06E6.5} 4175 CB6841_redo V 15434045 1 G A 84 1.69 63 62 23 42 65 @aaaA,.A.Aa.aAA.a.aaAA,aA,AA.aA,a,Aaa,aaa,,..AA,,aAAa.A.Aaaa...Aaa point 0 nongenic -1501 upstream {T26H5.8} 4176 CB6841_redo V 15434980 1 G C 21 1.00 63 62 31 38 69 @,,,cC,,,,CCcccCc,ccc..Cc.c.,,cC.C,cC,ccCcC,c.C.....C.,c,,c,C.CcCcCC.c point 0 SNP none {haw85321} 4177 CB6841_redo V 15435294 1 C A 25 1.00 63 62 37 52 89 @Aaa,aa..Aa..AA,aaAaaAAa,,aA,,.,,A.aaaa.Aa.A,Aaa,Aa..,aAa.,a.a,A,A.aAaaaaaa.,A,A,.a.a.,,A, point 0 SNP none {haw85323} 4178 CB6841_redo V 15479200 1 C A 255 1.00 63 62 0 28 28 @AAAAaaaaaaAAAaaAAaaaAAaaaAaa point 0 SNP none {haw85361} 4180 CB6841_redo V 15527875 1 G T 31 1.00 63 0 0 4 4 @tttt point 0 nongenic,nongenic -1468 upstream,-5878 upstream {F21A3.1},{F21A3.8} 4181 CB6841_redo V 15527876 1 T G 31 1.00 63 0 0 4 4 @gggg point 0 nongenic,nongenic -1467 upstream,-5879 upstream {F21A3.1},{F21A3.8} 4182 CB6841_redo V 15575708 1 C T 255 1.00 63 62 0 15 15 @ttttTtttTtTtttt point 0 silent AAG->AAA[Lys->Lys] {F28F8.6.1,F28F8.6.2} 4183 CB6841_redo V 15581676 1 T C 255 1.50 63 62 0 17 17 @CCccccccCCCccCCCC point 0 nongenic,nongenic -3995 upstream,-854 upstream {B0391.10},{F28F8.7} 4184 CB6841_redo V 15581801 1 T C 220 1.31 63 62 0 10 10 @cCcCcCCCCc point 0 nongenic,nongenic -3870 upstream,-979 upstream {B0391.10},{F28F8.7} 4185 CB6841_redo V 15584743 1 C G 12 1.00 63 12 0 4 4 @gggg point 0 nongenic,nongenic -3921 upstream,-928 upstream {F28F8.7},{B0391.10} 4186 CB6841_redo V 15584745 1 C G 12 1.00 63 12 0 4 4 @gggg point 0 nongenic,nongenic -3923 upstream,-926 upstream {F28F8.7},{B0391.10} 4189 CB6841_redo V 15702318 1 T C 255 1.00 63 62 0 18 18 @cCcccccCCCcCCcCCCC point 0 missense CAT->CGT[His->Arg] {K06B4.11} 4190 CB6841_redo V 15836205 1 C T 255 1.00 63 62 0 18 18 @tTTtTTTtTTTtttTTtt point 0 nongenic -2507 upstream {F54B8.11} 4191 CB6841_redo V 15912772 1 C T 255 1.00 63 62 0 36 36 @tTtttTttTTttTtttttTtTtTTTTTTTTtTTttT point 0 missense ACT->ATT[Thr->Ile] {F35E8.6} 4192 CB6841_redo V 16420522 1 G A 255 1.00 63 62 0 23 23 @AaAaAaAAaAAaaaaaAaAAAAa point 0 SNP none {haw88457} 4194 CB6841_redo V 16460133 1 C A 34 1.00 63 0 1 5 6 @,aAAaa point 0 nongenic,nongenic,nongenic -1344 upstream,-2277 upstream,772 into {T08G3.1},{T08G3.7},{T08G3.3} 5794 CB6841_redo V 16460134 1 X X -1000 -999.99 -1000 -1000 6 -5 1 @,.,,.. indel -1 SNP none {uCE5-2399} 4195 CB6841_redo V 16480151 1 C G 3 1.31 63 16 3 4 7 @G.GGG.. point 0 nongenic,nongenic -802 upstream,157 downstream {T08G3.11},{F57E7.4} 4196 CB6841_redo V 16542845 1 T A 255 1.00 63 62 0 23 23 @AAAAAAAaaaaaaAAaaAAaAaa point 0 nongenic,nongenic -8107 upstream,4477 into {Y32B12B.3},{Y32B12B.2} 4197 CB6841_redo V 16684344 1 G C 24 2.00 63 0 0 4 4 @CCCC point 0 nongenic,nongenic -1010 upstream,508 into {F14F8.5},{F14F8.7} 5796 CB6841_redo V 16707701 1 X X -1000 -999.99 -1000 -1000 13 -12 1 @......g.,,,,,c. indel -1 nongenic -1081 upstream {Y70C5C.2} 4218 CB6841_redo V 16723977 1 T C 255 1.00 63 62 0 22 22 @CCcCCCCcCccCccCCCCccCC point 0 nongenic,nongenic -160 upstream,-3209 upstream {Y70C5C.6a,Y70C5C.6b},{T25E12.14} 4219 CB6841_redo V 16723993 1 G C 255 1.00 63 62 1 23 24 @CccCccCCC,ccCCcCCCCCcCcc point 0 nongenic,nongenic -176 upstream,-3193 upstream {Y70C5C.6a,Y70C5C.6b},{T25E12.14} 4220 CB6841_redo V 16733914 1 A C 255 1.00 63 62 0 31 31 @CCCccCCCCcccCCCCcCcCccccCCCcCcc point 0 missense,SNP TTT->GTT[Phe->Val],none {T25E12.10},{haw89342,snp_T25E12[1]} 4221 CB6841_redo V 16816476 1 T C 255 1.00 63 62 0 35 35 @cCCCCCCcCCcccccCCCCCCcCCCCCCCCCCcCc point 0 nongenic 938 into {T20B3.1} 4222 CB6841_redo V 16874737 1 C G 99 1.00 63 54 3 7 10 @ggGGGGg.., point 0 nongenic,nongenic,nongenic -1110 upstream,-3277 upstream,690 into {F49A5.10},{F49A5.6},{F49A5.8} 4224 CB6841_redo V 16982761 1 A T 151 1.81 63 62 0 11 11 @TttttTtttTT point 0 nongenic 910 downstream {Y102A5C.25} 4226 CB6841_redo V 17040210 1 T C 139 4.69 63 62 0 7 7 @CCCCCCC point 0 nongenic,nongenic -2351 upstream,-4289 upstream {F28B1.1},{F49H6.11} 4229 CB6841_redo V 17189486 1 T C 7 2.00 63 8 2 2 4 @.,CC point 0 nongenic 331 into {Y68A4A.3} 4230 CB6841_redo V 17189488 1 C A 73 1.69 63 6 2 3 5 @.,AAA point 0 nongenic 333 into {Y68A4A.3} 4241 CB6841_redo V 17378169 1 G A 255 1.00 63 62 0 16 16 @AaAAAaaaAAaaAAAA point 0 SNP none {haw90646} 4252 CB6841_redo V 17619073 1 C G 255 1.19 63 62 0 27 27 @ggGggGgGgGgGgGGgGgGGGggGGgG point 0 nongenic,nongenic -1088 upstream,-2183 upstream {Y6G8.8},{Y6G8.6} 4255 CB6841_redo V 17657570 1 T A 255 1.00 63 62 0 26 26 @aAaAAAAaaaaAaaaAAaAAAaaaAA point 0 missense,SNP ACA->TCA[Thr->Ser],none {F59A1.7},{uCE5-2627} 4257 CB6841_redo V 17738078 1 A C 13 9.81 0 12 0 5 5 @CCCCC point 0 nongenic,nongenic -7728 upstream,1783 into {W06D12.2},{W06D12.1} 4261 CB6841_redo V 17738184 1 T C 12 5.00 0 2 0 4 4 @CCCC point 0 nongenic,nongenic -7834 upstream,1677 into {W06D12.2},{W06D12.1} 4262 CB6841_redo V 17738206 1 T C 15 7.00 0 12 0 6 6 @CCCCCC point 0 nongenic,nongenic -7856 upstream,1655 into {W06D12.2},{W06D12.1} 4263 CB6841_redo V 17738238 1 T C 114 9.38 26 62 0 11 11 @CCCCCCCccCC point 0 nongenic,nongenic -7888 upstream,1623 into {W06D12.2},{W06D12.1} 4264 CB6841_redo V 17835640 1 G T 255 1.00 63 62 0 25 25 @ttTTTTTTTtttTTtTTTTtTtTtT point 0 SNP none {haw91665} 4265 CB6841_redo V 17867118 1 T G 160 1.31 63 62 0 10 10 @gGggggGggg point 0 nongenic,nongenic,nongenic -11158 upstream,-4254 upstream,3502 into {Y59A8A.3.1},{Y59A8A.2},{Y59A8A.1} 161948 CB6841_redo V 17886018 53 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2882 to 2935 bp into {C06H5.6} 4282 CB6841_redo V 17898272 1 G A 255 4.44 63 62 0 28 28 @AAaAaAaAAAaaAAAaAaAAaAAAAaaa point 0 nongenic,nongenic -1517 upstream,-1523 upstream {C06H5.1},{C06H5.2} 4285 CB6841_redo V 17950254 1 T A 233 1.00 63 62 0 12 12 @aaaAAAAAAaAa point 0 SNP none {haw91922} 4286 CB6841_redo V 17961088 1 T A 179 2.94 63 62 0 12 12 @AAAAAaaAAAaA point 0 nongenic 5728 into {Y59A8B.23a,Y59A8B.23b} 4287 CB6841_redo V 17972070 1 G T 134 1.19 63 62 1 5 6 @t,ttTT point 0 nongenic,nongenic,nongenic,nongenic -14154 upstream,-5254 upstream,3512 into,3570 into {Y59A8B.21},{Y59A8B.23a,Y59A8B.23b},{Y59A8B.22.1},{Y59A8B.22.2} 4288 CB6841_redo V 17972080 1 G T 135 1.19 63 62 1 5 6 @,ttTTt point 0 nongenic,nongenic,nongenic,nongenic -14144 upstream,-5264 upstream,3522 into,3580 into {Y59A8B.21},{Y59A8B.23a,Y59A8B.23b},{Y59A8B.22.1},{Y59A8B.22.2} 4290 CB6841_redo V 17989158 1 A T 52 1.00 63 62 3 5 8 @.,,ttTtt point 0 nongenic,nongenic -9108 upstream,2934 into {Y59A8B.22.1,Y59A8B.22.2},{Y59A8B.21} 4291 CB6841_redo V 17989159 1 T C 82 1.00 63 52 3 5 8 @.,,ccCcc point 0 nongenic,nongenic -9109 upstream,2935 into {Y59A8B.22.1,Y59A8B.22.2},{Y59A8B.21} 5799 CB6841_redo V 17989160 1 X X -1000 -999.99 -1000 -1000 8 -5 3 @.,,..,.. indel -1 SNP none {uCE5-2743} 4292 CB6841_redo V 17999787 1 T C 54 7.31 63 62 2 5 7 @CCCCC,, point 0 nongenic,nongenic -7408 upstream,1540 into {Y59A8B.19},{Y59A8B.20} 4294 CB6841_redo V 18022415 1 G A 255 1.00 63 62 0 14 14 @aaAAaaAAaaaAAa point 0 nongenic,nongenic,nongenic -27 upstream,-29 upstream,-5122 upstream {Y59A8B.6.1},{Y59A8B.6.2},{Y59A8B.4} 4300 CB6841_redo V 18036815 1 G A 26 1.00 63 40 2 4 6 @AAAA., point 0 nongenic,nongenic,nongenic,nongenic -19522 upstream,-6721 upstream,5377 into,5485 into {Y59A8B.4},{Y59A8B.7},{Y59A8B.6.2},{Y59A8B.6.1} 4302 CB6841_redo V 18078793 1 C A 255 1.00 63 62 0 22 22 @AaAAAaaAaaaAAAAAAaAAAA point 0 nongenic -1366 upstream {Y59A8B.10} 4326 CB6841_redo V 18546002 1 G C 3 7.50 63 0 1 3 4 @Cc.c point 0 nongenic,nongenic 2990 into,3008 into {Y51A2D.7b},{Y51A2D.7a} 4327 CB6841_redo V 18546003 1 G C 14 7.50 63 0 0 4 4 @Cccc point 0 nongenic,nongenic 2989 into,3007 into {Y51A2D.7b},{Y51A2D.7a} 4330 CB6841_redo V 18557360 1 G C 34 1.00 63 24 1 6 7 @.ccCCcc point 0 nongenic,nongenic,nongenic -749 upstream,611 into,656 into {Y51A2D.9},{Y51A2D.10.2,Y51A2D.10.3,Y51A2D.10.4},{Y51A2D.10.1} 4331 CB6841_redo V 18656480 1 T C 255 1.00 63 62 0 34 34 @CCcCcccCcCcccCcccCCCCccCccccCCcCcc point 0 nongenic,nongenic,nongenic 324 into,348 downstream,408 into {Y69H2.3c},{Y69H2.12},{Y69H2.3b} 4335 CB6841_redo V 18683437 1 G T 13 7.00 0 12 0 5 5 @TTTTT point 0 nongenic 890 into {Y69H2.10b} 4336 CB6841_redo V 18720594 1 T A 40 1.00 63 62 12 16 28 @,Aa..,A,Aaa.aA,.A,a,AAaAa,A, point 0 nongenic -770 upstream {Y17D7C.2} 4337 CB6841_redo V 18858714 1 C T 230 1.38 63 62 0 19 19 @TTTTtTtTTttTtTTTTTT point 0 SNP none {haw93705} 4338 CB6841_redo V 18858815 1 C T 26 1.56 63 24 7 15 22 @tt,t,tt,,tttttttt,,tt, point 0 nongenic 372 into {Y80D3A.1} 4339 CB6841_redo V 18858818 1 T C 24 1.56 63 16 7 14 21 @c,c,cc,,cccccccc,,cc, point 0 nongenic 369 into {Y80D3A.1} 4340 CB6841_redo V 18858820 1 A G 17 1.56 63 24 7 14 21 @g,g,gg,,gggggggg,,gg, point 0 nongenic 367 into {Y80D3A.1} 4345 CB6841_redo V 18959114 1 A G 249 2.94 50 62 0 14 14 @gGggGGGgggGGGg point 0 nongenic,nongenic -1842 upstream,910 into {Y80D3A.9},{Y39B6A.46} 4346 CB6841_redo V 18959149 1 A G 181 6.12 50 62 0 10 10 @gGGggggggg point 0 nongenic,nongenic -1877 upstream,945 into {Y80D3A.9},{Y39B6A.46} 4347 CB6841_redo V 18962810 1 C T 141 1.00 63 62 0 5 5 @tTTTT point 0 nongenic,nongenic -2672 upstream,1745 into {Y39B6A.46},{Y39B6A.43a,Y39B6A.43b} 4350 CB6841_redo V 18965154 1 T A 191 1.00 63 62 0 12 12 @AAaaaaaaaaaa point 0 SNP none {haw94014} 4353 CB6841_redo V 19052087 1 T C 255 1.00 63 62 0 16 16 @cCcccccccccCcCCc point 0 SNP none {haw94226} 4364 CB6841_redo V 19100192 1 A T 71 2.81 63 62 3 3 6 @ttT,,, point 0 nongenic 882 into {Y39B6A.16} 4365 CB6841_redo V 19119922 1 T C 21 9.25 0 18 0 9 9 @ccccccCcC point 0 nongenic,nongenic,nongenic,nongenic -589 upstream,-7572 upstream,335 into,368 into {Y39B6A.13},{Y39B6A.11},{Y39B6A.12b},{Y39B6A.12a} 4366 CB6841_redo V 19187353 1 T C 255 1.00 63 62 0 23 23 @CcCcCccCccccCcccccccCCC point 0 nongenic 512 into {Y39B6A.48} 4371 CB6841_redo V 19485465 1 C G 4 1.00 63 32 2 3 5 @.,ggG point 0 nongenic -488 upstream {Y43F8B.18} 4372 CB6841_redo V 19499424 1 G C 255 1.00 63 62 0 18 18 @cccCcCcccCcccCCccc point 0 nongenic,nongenic -3651 upstream,-3772 upstream {Y43F8B.3a,Y43F8B.3b},{Y43F8B.5} 4373 CB6841_redo V 19506793 1 T A 255 1.00 63 62 0 17 17 @aAAaAaAAaAAAAAaAa point 0 nongenic,nongenic -11141 upstream,3718 into {Y43F8B.5},{Y43F8B.3a,Y43F8B.3b} 4374 CB6841_redo V 19680155 1 T A 12 1.00 63 62 4 5 9 @A,,,,aaaa point 0 nongenic 5318 into {Y43F8C.12} 4380 CB6841_redo V 19816962 1 C T 255 1.00 63 62 0 17 17 @ttTtttttTtttTTTtT point 0 SNP none {haw96009} 4381 CB6841_redo V 19828951 1 T C 255 1.00 63 62 0 30 30 @ccCCcCcCccCccCcccCcCCccCcCcCCc point 0 silent CAA->CAG[Gln->Gln] {Y116F11B.3.1,Y116F11B.3.2} 4382 CB6841_redo V 19862667 1 A C 255 1.00 63 62 0 14 14 @tCCcCCccccCccC point 0 ncRNA,SNP none,none {Y116F11B.9b},{haw96106} 4383 CB6841_redo V 19868214 1 C G 192 1.00 63 62 0 7 7 @GGggGgG point 0 nongenic,nongenic -267 upstream,-9969 upstream {Y116F11B.9a},{Y116F11B.11} 4384 CB6841_redo V 20002725 1 A G 52 7.50 50 26 0 11 11 @GGGGGGGGGGG point 0 nongenic,nongenic,nongenic,nongenic -5022 upstream,-8572 upstream,1724 into,1726 into {Y60A3A.23},{Y60A3A.25},{Y60A3A.1.2},{Y60A3A.1.1} 4389 CB6841_redo V 20328260 1 G A 71 1.00 63 8 0 5 5 @aaaAC point 0 nongenic 240 downstream {Y38H6A.1} 4390 CB6841_redo V 20328261 1 A T 8 1.00 63 62 2 4 6 @tttT,. point 0 nongenic 241 downstream {Y38H6A.1} 4391 CB6841_redo V 20337877 1 C T 255 1.00 63 62 0 15 15 @TtTTttTTTtttttT point 0 SNP none {haw97199} 4392 CB6841_redo V 20430334 1 A C 48 1.50 63 62 4 7 11 @CcCccCc,.., point 0 nongenic,nongenic -19889 upstream,967 into {F53H2.3},{F48F5.5} 4393 CB6841_redo V 20430338 1 T C 17 1.50 63 62 5 6 11 @cCccCc,..,. point 0 nongenic,nongenic -19893 upstream,963 into {F53H2.3},{F48F5.5} 4394 CB6841_redo V 20508851 1 C A 255 1.00 63 62 0 34 34 @aAAaaAAaaaAaAAAaaAAAaaaAaaaAaAaaaa point 0 nongenic,nongenic,nongenic -3790 upstream,-5877 upstream,1120 into {Y38H6C.4},{Y38H6C.8},{Y38H6C.5} 4398 CB6841_redo V 20550701 1 C T 255 1.00 63 62 0 19 19 @tttttttTTtttTtttTTt point 0 nongenic,nongenic -3589 upstream,427 into {Y38H6C.18},{Y38H6C.20} 4401 CB6841_redo V 20911018 1 C A 68 3.19 63 62 3 9 12 @AAAA.A.,AAaa point 0 nongenic,nongenic,nongenic -1308 upstream,-4430 upstream,589 into {F25C8.1},{Y44A6E.1a,Y44A6E.1b},{F25C8.5} 4413 CB6841_redo X 106701 1 A G 73 2.12 34 62 4 4 8 @,..,gGGg point 0 nongenic,nongenic -1938 upstream,269 downstream {Y73B3A.4},{Y73B3A.5} 4414 CB6841_redo X 161175 1 G T 255 2.44 63 62 0 26 26 @ttttttttTTTTttTtTTTtTtTTTT point 0 nongenic -3814 upstream {Y73B3A.10} 4417 CB6841_redo X 187274 1 C G 255 1.00 63 62 0 22 22 @gggggGGgggggGGGGggggGG point 0 SNP none {haw98538} 4419 CB6841_redo X 221047 1 A G 3 1.00 63 0 1 3 4 @G,Gg point 0 nongenic -5471 upstream {Y73B3B.2} 4424 CB6841_redo X 275068 1 G T 3 2.00 0 22 2 9 11 @ttt.tTtTtt, point 0 nongenic,nongenic -1055 upstream,571 into {Y108F1.5},{Y108F1.1} 4427 CB6841_redo X 289841 1 G C 119 2.00 63 62 1 6 7 @Cccccc, point 0 nongenic,nongenic -3316 upstream,-7406 upstream {Y47C4A.1},{R57.2} 4429 CB6841_redo X 291566 1 T C 5 8.38 8 24 4 30 34 @.,,,ccccCccCccCcCCcccCCcCCccCCcCcc point 0 nongenic,nongenic -5041 upstream,-5681 upstream {Y47C4A.1},{R57.2} 4430 CB6841_redo X 299633 1 T A 255 1.00 63 62 0 23 23 @aaaAAaaaaaaAaAaAAAaAAaa point 0 SNP none {haw98564} 4437 CB6841_redo X 341454 1 G C 255 1.00 63 62 0 16 16 @CCccccCcccccCccC point 0 nongenic -221 upstream {C04E7.4} 4443 CB6841_redo X 348115 1 C A 255 1.00 63 62 0 18 18 @AaAaaaaaaAAaaaAaAA point 0 SNP none {haw98580} 4449 CB6841_redo X 363939 1 C T 255 1.00 63 62 0 20 20 @TTTtTTtTTttTTTTTTTTt point 0 nongenic -8296 upstream {R04A9.2} 4450 CB6841_redo X 365026 1 T G 35 1.00 63 0 2 3 5 @ggg.. point 0 nongenic -7209 upstream {R04A9.2} 4453 CB6841_redo X 382890 1 C G 255 1.00 63 62 0 16 16 @gGGggGGgGGgGgGGG point 0 nongenic -179 upstream {R04A9.4} 4454 CB6841_redo X 424545 1 T C 242 1.56 63 62 0 11 11 @CcCCCccCCCc point 0 nongenic 1240 into {ZK1193.4} 4455 CB6841_redo X 424576 1 T C 255 2.06 63 62 0 18 18 @cCCCcCcCcCCccCCcCC point 0 SNP none {haw98625} 4456 CB6841_redo X 424587 1 T C 255 1.75 63 62 0 15 15 @CcCcCCccCCcCCcc point 0 SNP none {haw98626} 4457 CB6841_redo X 424629 1 T C 255 1.12 63 62 0 13 13 @cCcCcccCcCCcc point 0 nongenic 1324 into {ZK1193.4} 4458 CB6841_redo X 424765 1 G T 255 1.00 63 62 0 18 18 @TTttTTTTTttttttTtt point 0 SNP none {haw98627} 161951 CB6841_redo X 425408 59 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 937 to 996 bp into {ZK1193.4} 4463 CB6841_redo X 425547 1 C G 191 1.00 63 62 0 13 13 @GGGGGGGGGGGGG point 0 nongenic 857 into {ZK1193.4} 4469 CB6841_redo X 486102 1 A G 255 1.00 63 62 0 30 30 @GgggGggggGGGGGGgGGGGgGgggGGGGG point 0 SNP none {haw98666} 4470 CB6841_redo X 488781 1 A C 98 5.00 63 62 0 6 6 @CcccCc point 0 nongenic -915 upstream {F38G1.2} 4471 CB6841_redo X 488806 1 G T 243 1.25 63 62 0 13 13 @ttTtttTTTTTtT point 0 SNP none {haw98668} 4472 CB6841_redo X 491250 1 A C 25 1.00 63 62 3 3 6 @Ccc,,, point 0 nongenic,nongenic -1987 upstream,1026 into {B0310.1b},{F38G1.2} 4473 CB6841_redo X 491868 1 C A 255 1.00 63 62 0 21 21 @aaAAAaaaaAAAAaAAAaaAa point 0 SNP none {haw98673} 4482 CB6841_redo X 538129 1 G T 227 1.06 63 62 0 11 11 @TTTtTttTTTT point 0 nongenic,nongenic,nongenic -2292 upstream,-4979 upstream,943 into {F28C10.3},{F28C10.1},{F28C10.4} 4484 CB6841_redo X 538182 1 A G 108 1.00 63 62 0 4 4 @gggg point 0 nongenic,nongenic,nongenic -2345 upstream,-4926 upstream,996 into {F28C10.3},{F28C10.1},{F28C10.4} 4488 CB6841_redo X 608676 1 A C 23 1.00 63 4 2 5 7 @C,,cccc point 0 nongenic -182 upstream {F13C5.5} 4489 CB6841_redo X 614946 1 T G 4 5.81 63 2 1 4 5 @GGG.g point 0 nongenic,nongenic,nongenic,nongenic -14242 upstream,-6452 upstream,3680 into,3814 into {M6.4},{F13C5.5},{F13C5.6a},{F13C5.6b} 4490 CB6841_redo X 656620 1 G T 255 1.00 63 62 0 20 20 @TtTTttTTTTTtttTtttTT point 0 missense GTG->TTG[Val->Leu] {T19D7.3} 4491 CB6841_redo X 817619 1 A T 255 1.00 63 62 0 14 14 @tttTttTtttTTtt point 0 SNP none {haw98919} 4497 CB6841_redo X 1017350 1 T A 255 1.00 63 62 0 17 17 @aAAAAAaaAaaAAaaaa point 0 missense AAC->ATC[Asn->Ile] {F55A4.2} 4498 CB6841_redo X 1047732 1 C T 255 1.00 63 62 0 23 23 @tTttTtTTttTTTttTTtTTTtT point 0 nongenic,nongenic -1527 upstream,-6479 upstream {F55A4.8a},{K03E6.3} 4505 CB6841_redo X 1073732 1 G T 255 1.00 63 62 0 18 18 @tttttttttTttTTtTtt point 0 SNP none {haw99047} 4506 CB6841_redo X 1133524 1 T A 255 1.00 63 62 0 15 15 @aAaaaaAaaaAaaaa point 0 SNP none {haw99081} 4507 CB6841_redo X 1133556 1 T A 255 1.00 63 62 0 16 16 @AaaaaaAaAAaAaAAa point 0 SNP none {haw99082} 4513 CB6841_redo X 1239148 1 C T 255 1.00 63 62 0 30 30 @tttttttTTtTTtTtTTttttttttTTTtt point 0 SNP none {haw99128} 4514 CB6841_redo X 1308534 1 C A 255 1.00 63 62 0 21 21 @aAaaAaaaAaAAAAAAaaaAA point 0 SNP none {haw99198} 4517 CB6841_redo X 1333863 1 A C 181 1.00 63 62 0 7 7 @ccccCcC point 0 SNP none {haw99214} 4519 CB6841_redo X 1472305 1 G T 255 1.00 63 62 0 25 25 @tTttTTtttTttTttttTTTTttTt point 0 SNP none {haw99409} 4523 CB6841_redo X 1519786 1 C A 255 1.00 63 62 0 19 19 @AaaAaAAAAAaaaaaaaaa point 0 nongenic 1698 into {F09E10.8a,F09E10.8b} 4524 CB6841_redo X 1519787 1 C A 255 1.00 63 62 0 20 20 @AaaAaAAAAAaaaaaaaaaa point 0 nongenic 1697 into {F09E10.8a,F09E10.8b} 4525 CB6841_redo X 1604340 1 G T 126 1.00 63 62 0 6 6 @tttttt point 0 nongenic -561 upstream {H11E01.3} 4541 CB6841_redo X 1717742 1 C A 255 1.00 63 62 0 13 13 @aaaaAaaAaAAaa point 0 SNP none {haw99773} 4549 CB6841_redo X 1885828 1 C T 3 7.94 0 0 22 31 53 @tt.tt,.tt,Ttt.,tttt,tTtt,t,ttt..,t,,,t.T,tttT.T,...TT point 0 nongenic -6353 upstream {B0294.3} 4550 CB6841_redo X 1885991 1 C T 3 7.81 0 0 16 40 56 @,tttt.tttttt,tttttttt.ttttt,Tt.T,,t,t.TT.t,TTtT,,tt,Tt,T point 0 nongenic -6190 upstream {B0294.3} 4559 CB6841_redo X 2008655 1 A T 16 2.19 0 4 0 5 5 @TtTtT point 0 nongenic -5481 upstream {Y102A11A.9.1} 4563 CB6841_redo X 2008675 1 A C 38 1.62 63 62 2 3 5 @,cC,c point 0 nongenic -5461 upstream {Y102A11A.9.1} 4572 CB6841_redo X 2074335 1 G A 255 1.00 63 62 0 17 17 @AAAAAaaAAaaaAaAaA point 0 nongenic,nongenic -107 upstream,-3896 upstream {F49H12.5},{F49H12.6a.1} 4575 CB6841_redo X 2294558 1 G A 255 1.00 63 62 0 28 28 @AAAAaaAaAAAaaaaaaAAaaAaAaaAa point 0 nongenic,nongenic -185 upstream,-7375 upstream {T10H10.2},{T10H10.3} 4582 CB6841_redo X 2326631 1 A T 255 1.00 63 62 0 25 25 @TttTTtttTTTttTTTtTTTtttTt point 0 nongenic,nongenic -7303 upstream,-9046 upstream {T01B6.3a},{T01B6.1} 4583 CB6841_redo X 2370396 1 G T 59 1.00 63 36 2 3 5 @,,Ttt point 0 nongenic,nongenic -4459 upstream,-5595 upstream {T24D8.6},{F47G3.3} 4584 CB6841_redo X 2370397 1 A G 63 1.00 63 58 0 4 4 @CGgg point 0 nongenic,nongenic -4460 upstream,-5594 upstream {T24D8.6},{F47G3.3} 4585 CB6841_redo X 2435478 1 G C 151 1.00 63 62 1 7 8 @,CCccccc point 0 nongenic,nongenic,nongenic,nongenic -7978 upstream,3520 into,3675 into,3677 into {T07D1.1a,T07D1.1b},{T07D1.2.2},{T07D1.2.3},{T07D1.2.1} 4586 CB6841_redo X 2484648 1 T C 11 1.00 63 50 1 6 7 @.CCAccc point 0 nongenic,nongenic,nongenic -1742 upstream,-4393 upstream,1392 into {K02E10.6},{K02E10.2a},{K02E10.4a,K02E10.4b} 4587 CB6841_redo X 2486556 1 G A 255 1.50 63 62 0 20 20 @AAaAAaaaAaaaaaAAaAAa point 0 nongenic,nongenic,nongenic,nongenic -2485 upstream,-3650 upstream,1655 into,1733 into {K02E10.2a},{K02E10.6},{K02E10.4a},{K02E10.4b} 4597 CB6841_redo X 2871277 1 C T 245 1.00 63 62 0 12 12 @TTTTTttTtttt point 0 nongenic -222 upstream {F53B3.3} 4598 CB6841_redo X 2894432 1 A T 192 4.06 27 62 0 13 13 @TTTTttTTTttTT point 0 SNP none {snp_B0410[1]} 5820 CB6841_redo X 3007741 0 X X -1000 -999.99 -1000 -1000 16 -13 3 @.....,t,,,,,,,,,t. indel 0 nongenic,nongenic -1750 upstream,-3945 upstream {Y48D7A.1},{Y41G9A.6} 4601 CB6841_redo X 3027787 1 C G 233 1.00 63 62 0 14 14 @ggggggGgGggggg point 0 SNP none {haw101125} 4602 CB6841_redo X 3072981 1 G C 10 1.00 63 8 2 6 8 @CC,.CCCC point 0 nongenic,nongenic -2592 upstream,-8143 upstream {C33D12.1},{F52E4.4} 4604 CB6841_redo X 3072989 1 G C 12 1.00 63 2 0 4 4 @CCCC point 0 nongenic,nongenic -2600 upstream,-8135 upstream {C33D12.1},{F52E4.4} 4608 CB6841_redo X 3158207 1 C A 187 1.00 63 62 0 7 7 @aAaAaAa point 0 nongenic,nongenic -1722 upstream,-5753 upstream {C15C7.2.1},{C15C7.5} 4617 CB6841_redo X 3225118 1 T G 29 1.00 63 24 1 3 4 @GGG. point 0 nongenic -4758 upstream {F28B4.2a} 4618 CB6841_redo X 3237694 1 A G 255 1.00 63 62 0 21 21 @GggGggggGggGgGgggGggg point 0 missense,SNP TTT->TCT[Phe->Ser],none {F40F4.6},{haw101350} 4622 CB6841_redo X 3367002 1 C G 255 1.00 63 62 0 27 27 @GgGgGGGGGGggGGgGGGgggGGGggg point 0 nongenic,nongenic -1945 upstream,-4519 upstream {ZK563.2},{ZK816.5} 4623 CB6841_redo X 3367003 1 G C 255 1.00 63 62 0 26 26 @cCcCCCCCCccCCcCCCcccCCCccc point 0 nongenic,nongenic -1944 upstream,-4520 upstream {ZK563.2},{ZK816.5} 4624 CB6841_redo X 3408399 1 T C 228 1.69 63 62 0 20 20 @CcCCCCCCCCCCCcCccCCC point 0 silent ATT->ATC[Ile->Ile] {C04F6.1.1,C04F6.1.2,C04F6.1.3} 4625 CB6841_redo X 3412023 1 T G 7 1.00 63 6 1 4 5 @G,CGG point 0 ncRNA none {C04F6.6} 4627 CB6841_redo X 3413731 1 A T 79 1.00 63 0 0 4 4 @Tttt point 0 nongenic,nongenic,nongenic -11072 upstream,-2059 upstream,891 into {ZK813.6},{C04F6.4b.1},{C04F6.5} 4629 CB6841_redo X 3520397 1 C G 42 1.00 63 24 0 5 5 @AggGG point 0 nongenic,nongenic -14043 upstream,-8402 upstream {C12D12.5},{F56B6.5a,F56B6.5b} 4630 CB6841_redo X 3631566 1 G A 49 3.06 63 12 28 53 81 @,..A,,,a,.Aa.,,,,,.,,,,,,,,AAA,,.A,AAA,AAAAAAAAAAAAAAaAAAAAAAAaAAAaAAAaAAaAaAAAaa point 0 nongenic,nongenic 693 downstream,976 downstream {C18B2.1},{R11G1.3} 4631 CB6841_redo X 3631690 1 C G 84 3.12 63 62 47 93 140 @,,.,...,,,,,gG.ggGGg..g,,G,,..,G,,.gg,GggGgggGGggggGGgg..GG.gggg,..GgggGGggGGGgGGgg.GGgGGGGG.gG,ggG point 0 SNP none {haw101541} 4632 CB6841_redo X 3631792 1 G T 83 1.00 63 62 27 72 99 @...,TTTtTtTtt.T,tttTt,,,ttttttttTtTTtTt.T.tTt.t.,t.Tt.,.tT..ttTtTttttt,t,,,ttttttttTt,tt,,ttTcttCtt point 0 SNP none {haw101542} 4633 CB6841_redo X 3653458 1 T C 255 1.00 63 62 0 27 27 @CccccCCccCccCCccccCCCCcCCcc point 0 SNP none {haw101553} 4634 CB6841_redo X 3811358 1 A C 37 1.00 63 60 1 3 4 @.ccC point 0 nongenic 3909 into {F35A5.1} 4635 CB6841_redo X 3811996 1 T G 184 1.44 63 62 2 8 10 @ggGGgggG,, point 0 nongenic 4398 into {F35A5.1} 4636 CB6841_redo X 3812010 1 G C 32 1.69 63 24 2 2 4 @cC,, point 0 nongenic 4384 into {F35A5.1} 4638 CB6841_redo X 3812100 1 T A 31 1.06 63 62 6 7 13 @,aa,A,a,,,AAA point 0 nongenic 4294 into {F35A5.1} 4641 CB6841_redo X 3867519 1 T G 36 1.00 63 4 1 3 4 @ggg. point 0 nongenic -9740 upstream {ZC64.3a,ZC64.3b,ZC64.3c} 4642 CB6841_redo X 3902119 1 A C 111 1.00 63 62 0 5 5 @ccccc point 0 nongenic,nongenic -2451 upstream,-6460 upstream {T22B2.4a},{F47F2.3} 4647 CB6841_redo X 3903048 1 T C 95 1.00 63 62 0 4 4 @cccC point 0 nongenic,nongenic -1522 upstream,-7389 upstream {T22B2.4a},{F47F2.3} 4648 CB6841_redo X 3924055 1 A G 255 1.00 63 62 0 24 24 @gGGGgGggGgGGGGGGgGGgGggg point 0 nongenic,nongenic -2005 upstream,841 downstream {T22B2.1},{T22B2.2} 4649 CB6841_redo X 4017953 1 T C 20 1.00 63 62 2 3 5 @ccc,. point 0 nongenic,nongenic,nongenic -1269 upstream,-1829 upstream,4235 into {R02E12.2b.1},{R02E12.6.1},{R02E12.2a} 4650 CB6841_redo X 4025107 1 A G 255 1.00 63 62 0 26 26 @GgggGgGGGggGGGGGgGggGGGGGg point 0 silent AAA->AAG[Lys->Lys] {R02E12.8} 4651 CB6841_redo X 4025157 1 C T 27 1.00 63 10 1 5 6 @.ttttt point 0 missense TCT->TTT[Ser->Phe] {R02E12.8} 4652 CB6841_redo X 4026006 1 A C 157 3.31 63 62 0 17 17 @CCCCCCccCCccccccc point 0 nongenic 444 downstream {R02E12.8} 4681 CB6841_redo X 4086774 1 G C 9 1.00 63 46 2 3 5 @,,ccc point 0 nongenic -5751 upstream {T06F4.3} 4686 CB6841_redo X 4241735 1 A C 253 1.50 63 62 0 19 19 @CccCccccccccccccccc point 0 SNP none {haw101997} 4687 CB6841_redo X 4241797 1 A G 63 1.50 63 62 0 4 4 @GGgg point 0 nongenic -5974 upstream {W01H2.3a} 4688 CB6841_redo X 4241827 1 T C 163 1.81 63 62 0 12 12 @ccCccCCCCCcC point 0 nongenic -6004 upstream {W01H2.3a} 4689 CB6841_redo X 4241844 1 G A 109 2.00 63 62 4 10 14 @AaaAAAAA.,A,A, point 0 nongenic -6021 upstream {W01H2.3a} 4690 CB6841_redo X 4241902 1 T C 94 3.31 63 62 0 7 7 @CCCcccc point 0 nongenic -6079 upstream {W01H2.3a} 4691 CB6841_redo X 4241950 1 A G 13 2.19 0 12 0 5 5 @ggggg point 0 nongenic -6127 upstream {W01H2.3a} 4692 CB6841_redo X 4242071 1 T C 15 2.19 0 14 0 6 6 @CCCCCC point 0 nongenic -6248 upstream {W01H2.3a} 4693 CB6841_redo X 4242094 1 G A 22 2.19 12 20 0 8 8 @AaaAAAaA point 0 nongenic -6271 upstream {W01H2.3a} 4694 CB6841_redo X 4242110 1 A C 163 2.25 41 62 2 18 20 @ccCCCcCCCCCcccc,,ccc point 0 nongenic -6287 upstream {W01H2.3a} 4700 CB6841_redo X 4513922 1 C T 229 1.00 63 62 0 9 9 @TttttTtTT point 0 SNP none {snp_F46H6[6]} 4703 CB6841_redo X 4556555 1 G T 37 1.00 63 52 1 3 4 @,Ttt point 0 nongenic,nongenic,nongenic -553 upstream,1890 into,1891 into {C07A12.1c},{C07A12.1a},{C07A12.1b} 4710 CB6841_redo X 4577179 1 A T 255 1.00 63 62 0 23 23 @tttttttTttTTtTTtTTtTTTT point 0 SNP none {haw102400} 4711 CB6841_redo X 4578097 1 T C 255 1.00 63 62 0 18 18 @CcCccCcCCCccCCcccC point 0 nongenic -1381 upstream {C05E11.3} 4714 CB6841_redo X 4645170 1 C A 255 1.00 63 62 0 23 23 @AAAaaAAaaaaAaaaAAAaAAAA point 0 missense,SNP GCT->TCT[Ala->Ser],none {C46C11.4},{haw102467,pas15116} 4720 CB6841_redo X 4721074 1 G C 18 1.00 63 26 1 3 4 @,cCc point 0 nongenic -462 upstream {F55D10.4} 4721 CB6841_redo X 4721075 1 C G 27 1.00 63 18 1 4 5 @,gGgG point 0 nongenic -463 upstream {F55D10.4} 4722 CB6841_redo X 4839664 1 T C 255 1.00 63 62 0 27 27 @ccCCcccCCCCCCccccCCccCcCCCC point 0 missense,SNP ACC->GCC[Thr->Ala],none {F39C12.1},{haw102674,pas15120} 4723 CB6841_redo X 4971580 1 C T 255 1.00 63 62 0 24 24 @TtTtttTTTTttTtttTttTTttT point 0 nongenic,nongenic,nongenic -699 upstream,-715 upstream,989 downstream {M03F4.7a},{M03F4.7b},{ZC8.6} 4724 CB6841_redo X 4971581 1 A C 255 1.00 63 62 0 25 25 @cCcccCCCCccCcccCccCCccCCc point 0 nongenic,nongenic,nongenic -700 upstream,-716 upstream,988 downstream {M03F4.7a},{M03F4.7b},{ZC8.6} 4728 CB6841_redo X 5004528 1 G C 12 3.00 63 0 0 4 4 @cccc point 0 nongenic -709 upstream {ZC8.1} 4729 CB6841_redo X 5004530 1 G C 39 3.00 63 0 0 4 4 @cccc point 0 nongenic -707 upstream {ZC8.1} 5841 CB6841_redo X 5056499 1 X X -1000 -999.99 -1000 -1000 55 -49 6 @,,,,,,,,,,,,,,,,,,.............,C,,,....A,,,...,......... indel -1 nongenic -832 upstream {Y64H9A.1} 4734 CB6841_redo X 5123322 1 T G 255 1.00 63 62 0 20 20 @GgggggggGgggggGGGgGG point 0 nongenic,nongenic -15637 upstream,-6482 upstream {C31H2.1a,C31H2.1b},{C42D8.8b.1} 4735 CB6841_redo X 5134151 1 C G 255 1.00 63 62 0 22 22 @GGggGGggGgGgGgGgGGgGgg point 0 nongenic,nongenic -17311 upstream,-4808 upstream {C42D8.8b.1},{C31H2.1a,C31H2.1b} 4736 CB6841_redo X 5134152 1 G C 255 1.00 63 62 0 22 22 @CCccCCccCcCcCcCcCCcCcc point 0 nongenic,nongenic -17312 upstream,-4807 upstream {C42D8.8b.1},{C31H2.1a,C31H2.1b} 161957 CB6841_redo X 5140371 49 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1411 to 1460 bp into {C31H2.1a,C31H2.1b} 4738 CB6841_redo X 5195550 1 G C 42 1.00 63 6 1 4 5 @cCCC, point 0 nongenic,nongenic -2201 upstream,-6541 upstream {T03G11.1},{T03G11.8} 4739 CB6841_redo X 5195552 1 C G 10 1.00 63 6 1 3 4 @GGG, point 0 nongenic,nongenic -2199 upstream,-6543 upstream {T03G11.1},{T03G11.8} 4740 CB6841_redo X 5195553 1 A C 6 1.00 63 10 1 3 4 @CCC, point 0 nongenic,nongenic -2198 upstream,-6544 upstream {T03G11.1},{T03G11.8} 4743 CB6841_redo X 5229274 1 C G 7 1.00 63 0 1 5 6 @.ggggg point 0 nongenic -7264 upstream {H28G03.3} 5844 CB6841_redo X 5508058 4 X X -1000 -999.99 -1000 -1000 10 -9 1 @,,,,.,..,. indel -4 SNP none {uCE6-931} 5845 CB6841_redo X 5819247 0 X X -1000 -999.99 -1000 -1000 2 -1 1 @,G, indel 1 nongenic,nongenic -13362 upstream,-2990 upstream {F13D11.3.1},{F13D11.2a} 4759 CB6841_redo X 5857436 1 T G 255 1.00 63 62 0 24 24 @gGgggGGGgGgggGggggGggggg point 0 nongenic,nongenic -3221 upstream,-5280 upstream {W06B11.4},{F49E10.5} 4760 CB6841_redo X 5883992 1 C T 255 1.00 63 62 0 20 20 @TTtTTttttTttttTtTTTt point 0 SNP none {haw103817} 4762 CB6841_redo X 6057717 1 C T 255 1.00 63 62 0 29 29 @ttttTTTTttTTTtTTTTTttTTTTTtTt point 0 nongenic,nongenic -496 upstream,411 downstream {C45B2.5.1,C45B2.5.2},{C45B2.6} 4766 CB6841_redo X 6092456 1 A T 255 1.00 63 62 0 23 23 @TTttTTtTTTtttTTTTttTtTT point 0 nongenic,nongenic,nongenic,nongenic -371 upstream,-694 upstream,-789 upstream,-803 upstream {C15H9.6.1},{C15H9.6.2},{C15H9.5.1},{C15H9.5.2} 4767 CB6841_redo X 6093387 1 G A 255 1.00 63 62 0 21 21 @aaaAaAAAAAAaAAAAaaaaA point 0 nongenic,nongenic,nongenic,nongenic -1302 upstream,-7789 upstream,128 into,142 into {C15H9.6.1},{C15H9.4},{C15H9.5.2},{C15H9.5.1} 4768 CB6841_redo X 6107174 1 T A 255 1.00 63 62 0 28 28 @aAaaAaAaAAAaaAAAaaaaAAaaaAAa point 0 nongenic 289 into {C15H9.7} 4781 CB6841_redo X 6287403 1 T A 16 5.81 0 2 0 5 5 @AaAaa point 0 nongenic,nongenic,nongenic -1272 upstream,-5681 upstream,980 into {T07H6.4},{T07H6.2},{T07H6.5} 161959 CB6841_redo X 6287476 334 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3728 to 4062 bp into {T07H6.5} 4786 CB6841_redo X 6308961 1 C T 255 1.00 63 62 0 26 26 @TttTTTtTTTTttTtTtttTttttTT point 0 nongenic -2711 upstream {T10E10.3} 4787 CB6841_redo X 6368915 1 C T 255 1.00 63 62 0 17 17 @tTttTTTTTTtttttTT point 0 nongenic,nongenic -4690 upstream,1344 into {C03B1.1},{C03B1.2} 4788 CB6841_redo X 6412638 1 A T 255 1.00 63 62 0 19 19 @TtTTTTTtTtTTttttttt point 0 SNP none {haw104221} 4790 CB6841_redo X 6518614 1 G A 255 1.00 63 62 0 18 18 @AaaaaAAAaaaAaaAAAa point 0 nongenic -449 upstream {F22A3.1b} 4791 CB6841_redo X 6526168 1 C T 255 1.00 63 62 0 32 32 @tttTtTTTTTTtTTtttTTTTTTTTttTTttT point 0 nongenic 1849 into {F22A3.5} 4797 CB6841_redo X 6775993 1 C T 255 1.00 63 62 0 27 27 @ttTTtTTttttTttTTtTttttttttt point 0 nongenic,nongenic -4392 upstream,-7219 upstream {R03E9.4},{H22K11.3} 4798 CB6841_redo X 6792031 1 G C 255 1.00 63 62 0 22 22 @cCcCCCCcCcCccCcCCcCccc point 0 missense GAG->GAC[Glu->Asp] {H22K11.1} 4799 CB6841_redo X 6843321 1 A T 53 9.69 63 52 0 14 14 @TtTttTTtTtTTtT point 0 nongenic -1387 upstream {C53B7.3a,C53B7.3b,C53B7.3c,C53B7.3d.2} 4807 CB6841_redo X 6917321 1 C T 255 1.00 63 62 0 27 27 @TTTtTTtTTTTtttTtTTttTTtttTt point 0 silent CCC->CCT[Pro->Pro] {F14B8.1a,F14B8.1b.1,F14B8.1b.2} 4808 CB6841_redo X 6968330 1 C T 255 1.00 63 62 0 21 21 @TTttttttTttTttTttTTtt point 0 nongenic,nongenic,nongenic -11978 upstream,-23377 upstream,1010 into {C16E9.4a},{F01E11.1},{F01E11.3} 4816 CB6841_redo X 7077720 1 T C 210 6.56 63 62 34 221 255 @CCCCCCCCCC,C,CcccccccccccccCCCCCCCCCCCCCCCCCCCC,GCCCcccccccccccccccCCCCCCCCCCCCCCCC,,CCCCCCCCCCCCcc point 0 nongenic,nongenic -2432 upstream,-7596 upstream {B0403.6},{Y1B5A.1} 4818 CB6841_redo X 7078149 1 A T 5 5.75 28 32 132 123 255 @,,,,,..,,,,....,TT.......t,,,T,,TT,,...tt..,,,,,T,,,................T....t.,,.,,,,..T,.........,,T. point 0 nongenic,nongenic -2861 upstream,-7167 upstream {B0403.6},{Y1B5A.1} 4819 CB6841_redo X 7078203 1 A G 27 8.25 0 56 62 193 255 @,Gg.ggg,gggGGGGGgG,GGgggggG,Gg...gggggggggGggggggggggGgggggGGgggg.g.gg,Ggggg..,gggg.GGgggggGg.GgGG, point 0 nongenic,nongenic -2915 upstream,-7113 upstream {B0403.6},{Y1B5A.1} 4820 CB6841_redo X 7078298 1 G A 3 7.44 30 24 90 165 255 @TAa.aa.,,AAaaaa.a.AAA,aaaaaa.aaaaaaAAAAAAaaaa.aaaA,a.aa.AA,Aa..a.a.aa...A,aAAA.aaacAaaa.aa.aa.c.caA point 0 nongenic,nongenic -3010 upstream,-7018 upstream {B0403.6},{Y1B5A.1} 4824 CB6841_redo X 7078503 1 A G 3 8.69 0 16 42 209 251 @,GGGGgGG,..,GG.gG,Ggggg,GGGgggg.G.ggggggG,gg,ggG,.,g.gggGGGGggggggg,GGGGgg.gg.ggGgggggg,GGGGGGggggg point 0 nongenic,nongenic -3215 upstream,-6813 upstream {B0403.6},{Y1B5A.1} 4825 CB6841_redo X 7078663 1 A G 3 9.06 0 16 62 193 255 @G,.........,,.,,,,g.g,g,,g..gGGG,G,ggGggg.ggg.Ggg.ggg,GG.ggGG,GgG,GGgggGggggggGG,Gggggggggggggg,GGG point 0 nongenic,nongenic -3375 upstream,-6653 upstream {B0403.6},{Y1B5A.1} 4826 CB6841_redo X 7078698 1 T A 3 5.38 0 2 41 82 123 @,,,,,,A,,g,,,..a,ag.aAg..aaaa,ag..,agag,G,.gggAA,,GaG,AAA,gaGAAaa.aaaaA,.aaAAAaaA,AAAAaaag,AAaaagAA point 0 nongenic,nongenic -3410 upstream,-6618 upstream {B0403.6},{Y1B5A.1} 4829 CB6841_redo X 7078863 1 A G 3 9.31 0 18 41 214 255 @G.G,...g.,gggggggg..GGGgG,,.gggGgGGGggggGGgggG,G,GggGGGG,.gGGGGGggGGGGGG,GGGGGgggGGGG,GGGGGGg..gggG point 0 nongenic,nongenic -3575 upstream,-6453 upstream {B0403.6},{Y1B5A.1} 4831 CB6841_redo X 7079018 1 G A 3 7.75 35 20 66 89 155 @AA,AAAAa.a.AaaaAAAAaaaaAa..aaAAaaAAAA.AA.aAaAaa..,Aaaa,.,aa..,aa.aaAAa.aaa,aA,,A.a,aAAaaa..a...A.,. point 0 nongenic,nongenic -3730 upstream,-6298 upstream {B0403.6},{Y1B5A.1} 4832 CB6841_redo X 7079063 1 A G 3 8.75 0 6 34 125 159 @.,.,...,,Gg,..gG.,,GGgg.GggggGggG,gGggG,GGgggggGggggg.ggGgggggggggggGGGGgg.GgggggggggGGGgggG,g.gggg point 0 nongenic,nongenic -3775 upstream,-6253 upstream {B0403.6},{Y1B5A.1} 4835 CB6841_redo X 7112263 1 G T 25 4.38 63 62 2 3 5 @ttt,, point 0 nongenic -576 upstream {C36B7.1} 4836 CB6841_redo X 7145340 1 T C 41 1.00 63 26 2 3 5 @CCc.. point 0 missense AAG->AGG[Lys->Arg] {C54D1.5} 4837 CB6841_redo X 7224737 1 A T 255 1.00 63 62 0 16 16 @TTTttTttTTTtttTt point 0 nongenic 2032 into {ZK867.1a,ZK867.1b,ZK867.1c,ZK867.1d} 4838 CB6841_redo X 7247377 1 C A 255 1.00 63 62 0 15 15 @aAAAaaaAAAAAaAA point 0 SNP none {haw104705} 4846 CB6841_redo X 7361569 1 A G 77 1.38 53 0 0 5 5 @GgGGG point 0 nongenic -3945 upstream {C56G3.2} 5855 CB6841_redo X 7361575 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,,ag indel 3 nongenic -3940 upstream {C56G3.2} 4849 CB6841_redo X 7361576 1 A C 14 1.00 43 0 0 4 4 @CCcc point 0 nongenic -3938 upstream {C56G3.2} 4851 CB6841_redo X 7362977 1 A G 131 2.88 63 62 0 14 14 @GggGggGgGgGGGg point 0 nongenic -2537 upstream {C56G3.2} 4855 CB6841_redo X 7527774 1 C T 255 1.00 63 62 0 12 12 @tttTTTTtTttt point 0 SNP none {haw104910} 5857 CB6841_redo X 7559950 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @,...ccCC indel 0 nongenic,nongenic -126 upstream,-950 upstream {F08C6.5},{PDB1.1b.1} 4857 CB6841_redo X 7566551 1 T C 255 1.00 63 62 0 16 16 @ccccCCCcCcccccCc point 0 missense,SNP GTT->GCT[Val->Ala],none {F08C6.3},{haw104923} 4858 CB6841_redo X 7588883 1 T C 255 1.00 63 62 0 32 32 @cCccccCcCccCCcccccCcCCCCCCCCCcCC point 0 missense TCA->CCA[Ser->Pro] {F08C6.1a.1,F08C6.1a.2,F08C6.1c} 4863 CB6841_redo X 7649424 1 A G 7 1.00 63 18 2 3 5 @..GGG point 0 nongenic,nongenic -12393 upstream,-1649 upstream {F26A10.2},{F27D9.3} 4864 CB6841_redo X 7666636 1 C T 255 1.00 63 62 0 25 25 @TtttTTtTTttttTTTtTTTttttT point 0 nongenic,nongenic,nongenic -1779 upstream,-6298 upstream,824 into {F27D9.6},{F27D9.2},{F27D9.7} 4867 CB6841_redo X 7729211 1 C T 255 1.00 63 62 0 21 21 @tTttTTttTtTtTttTtTTtt point 0 silent CTC->CTT[Leu->Leu] {K09F5.2} 4869 CB6841_redo X 7764853 1 T A 171 4.44 63 62 0 8 8 @aAAaaaAa point 0 nongenic,nongenic,nongenic -6756 upstream,1693 into,1703 into {C47C12.4},{C47C12.6.1,C47C12.6.2},{C47C12.6.3} 4870 CB6841_redo X 7764866 1 C T 48 8.31 63 40 0 4 4 @ttTt point 0 nongenic,nongenic,nongenic -6769 upstream,1706 into,1716 into {C47C12.4},{C47C12.6.1,C47C12.6.2},{C47C12.6.3} 4876 CB6841_redo X 7771370 1 G A 169 1.00 63 62 0 9 9 @aaaaaaaaa point 0 nongenic,nongenic,nongenic,nongenic -13273 upstream,3389 into,3390 into,3488 into {C47C12.4},{C47C12.6.2},{C47C12.6.3},{C47C12.6.1} 4877 CB6841_redo X 7771404 1 G A 86 1.00 63 62 0 4 4 @aaaa point 0 nongenic,nongenic,nongenic,nongenic -13307 upstream,3355 into,3356 into,3454 into {C47C12.4},{C47C12.6.2},{C47C12.6.3},{C47C12.6.1} 4882 CB6841_redo X 7832120 1 C T 255 1.00 63 62 0 23 23 @TtttttttTtttttTTtttttTT point 0 nongenic,nongenic,nongenic,nongenic,nongenic -6758 upstream,1791 into,1815 into,1858 into,2358 into {C54D2.2},{C54D2.4b.2},{C54D2.4b.3},{C54D2.4a},{C54D2.4b.1} 4883 CB6841_redo X 7872981 1 C A 255 1.00 63 62 0 25 25 @AAaAaAaaaAAaAaAAaAAAAAaaA point 0 SNP none {haw105178} 4884 CB6841_redo X 7927043 1 C T 255 1.00 63 62 0 14 14 @tTTTtTTttttTTt point 0 nongenic,nongenic -3639 upstream,578 downstream {C14F5.2},{C09C7.1} 4887 CB6841_redo X 7984029 1 C A 10 1.00 63 62 2 3 5 @..aaA point 0 nongenic,nongenic -1897 upstream,-2008 upstream {F45E1.4},{F45E1.6.1} 4891 CB6841_redo X 8029563 1 C T 255 1.00 63 62 0 22 22 @TTTtttTtttTTtttTttttTt point 0 SNP none {haw105378} 4892 CB6841_redo X 8033820 1 G C 198 1.00 63 62 0 8 8 @CCcCCccC point 0 missense GCC->GGC[Ala->Gly] {C18A11.6} 4893 CB6841_redo X 8053010 1 G C 42 1.00 63 20 1 3 4 @,cCC point 0 nongenic,nongenic,nongenic,nongenic -384 upstream,-386 upstream,-8054 upstream,2050 into {C18A11.7b.1},{C18A11.7b.2},{C18A11.3},{C18A11.7a} 4894 CB6841_redo X 8113367 1 C T 255 1.00 63 62 0 22 22 @tTTTTTTTTttTttTTTtTTtT point 0 silent GAC->GAT[Asp->Asp] {K07E3.1} 4898 CB6841_redo X 8319668 1 C T 105 2.00 63 62 8 10 18 @,tt.,t,,,t,ttTtt,t point 0 silent CAG->CAA[Gln->Gln] {R09F10.7} 4900 CB6841_redo X 8374920 1 C T 103 1.00 63 0 0 4 4 @TttT point 0 nongenic,nongenic -1100 upstream,505 downstream {F40B5.1},{F40B5.3} 4903 CB6841_redo X 8400334 1 C G 3 1.00 63 14 2 4 6 @Gggg.. point 0 nongenic -7811 upstream {F41D9.3e} 4917 CB6841_redo X 8596016 1 A G 5 1.00 63 4 2 3 5 @.,ggG point 0 missense TCC->CCC[Ser->Pro] {F18E9.7} 4921 CB6841_redo X 8603040 1 A G 39 1.00 63 6 0 4 4 @gggg point 0 nongenic,nongenic 423 downstream,914 downstream {H35N09.2},{F18E9.1} 4922 CB6841_redo X 8603049 1 A G 78 1.00 63 62 1 5 6 @g.ggGg point 0 nongenic,nongenic 414 downstream,923 downstream {H35N09.2},{F18E9.1} 4923 CB6841_redo X 8629824 1 A C 255 1.00 63 62 0 19 19 @cCcCCCccCcCCcccccCc point 0 SNP none {haw105786} 4924 CB6841_redo X 8630462 1 C T 63 1.00 63 62 1 3 4 @tTt, point 0 SNP none {haw105788} 4928 CB6841_redo X 8769996 1 A G 47 1.00 63 62 1 8 9 @GGGGGGGG, point 0 nongenic -8791 upstream {ZK721.4.1} 4929 CB6841_redo X 8918018 1 C T 255 1.00 63 62 0 25 25 @ttTTTtTtTttTTTTttTtTTTTtt point 0 nongenic,nongenic -13161 upstream,643 into {D1009.1a},{D1009.4} 4931 CB6841_redo X 8963615 1 A G 84 1.00 63 60 1 6 7 @GggGgG, point 0 nongenic,nongenic -17299 upstream,-2505 upstream {C48C5.1},{C48C5.3} 4933 CB6841_redo X 9114559 1 T C 255 1.00 63 62 0 18 18 @cccccCCccCCcCCCccc point 0 silent,SNP CTT->CTC[Leu->Leu],none {C25A11.2},{haw106138,pas23144} 4934 CB6841_redo X 9171369 1 G T 255 1.00 63 62 0 25 25 @TTTtTttTTtTTTtTTTtTttTTtt point 0 SNP none {haw106181} 4935 CB6841_redo X 9188219 1 C T 255 5.00 63 62 65 188 253 @,,,..,,,T,Tt...,..,,,....,,,t,T,....,,..,,.....,.t..t.,,.,..TTTTtTTTTTtTTTTTTTt,TTTTTTttt,TTTttTTTT point 0 SNP none {haw106187} 4941 CB6841_redo X 9262798 1 T G 43 1.00 63 54 5 9 14 @,..,,GgggGggGg point 0 nongenic 807 into {F18G5.6} 4942 CB6841_redo X 9262799 1 G T 54 1.00 63 42 5 9 14 @,..,,TtttTttTt point 0 nongenic 808 into {F18G5.6} 4944 CB6841_redo X 9407197 1 C A 255 1.00 63 62 0 23 23 @AAAAaAaAAAaaaaaaAaaaaaA point 0 premature_stop TAC->TAA[Tyr->stop] {C23F12.2} 4948 CB6841_redo X 9439259 1 C A 34 4.31 63 62 9 19 28 @,a,aaaaaaaaa,aaa,,,a,a,a,aaa point 0 nongenic -2432 upstream {B0272.1} 4949 CB6841_redo X 9460268 1 C T 3 2.00 0 2 4 11 15 @.tttttT.ttTtT,. point 0 missense GGA->GAA[Gly->Glu] {ZK899.5} 4950 CB6841_redo X 9462102 1 T C 216 1.50 63 62 0 10 10 @ccCCCCCcCC point 0 nongenic,nongenic -1186 upstream,-1234 upstream {ZK899.6},{ZK899.5} 4953 CB6841_redo X 9536669 1 T A 255 1.00 63 62 0 19 19 @aaAAaaaAaaaAAaaaaaA point 0 SNP none {haw106328} 4954 CB6841_redo X 9538545 1 G A 255 1.00 63 62 0 18 18 @AaAaaAAAAAAaaaAAAA point 0 nongenic -1294 upstream {C07B5.5} 4955 CB6841_redo X 9604621 1 T C 3 7.75 63 2 1 4 5 @CCCC, point 0 nongenic -5876 upstream {C11E4.6} 4958 CB6841_redo X 9703760 1 T A 108 2.75 63 62 0 4 4 @AAAA point 0 nongenic -3113 upstream {F15G9.1a} 4959 CB6841_redo X 9703853 1 T C 149 1.19 63 62 0 6 6 @CCCcCc point 0 nongenic -3020 upstream {F15G9.1a} 4960 CB6841_redo X 9774476 1 A G 255 1.00 63 62 0 18 18 @ggGgGGGgggGgggGGgg point 0 SNP none {haw106424} 4961 CB6841_redo X 9861507 1 G T 255 1.00 63 62 0 20 20 @TTTTttTTTTTTTTttTttt point 0 missense,SNP AGT->ATT[Ser->Ile],none {R07B1.3},{haw106438} 4962 CB6841_redo X 9882632 1 A C 255 1.00 63 62 0 27 27 @ccCCcCCCCCCCcCCCCCccCCCCccC point 0 nongenic,nongenic -1579 upstream,-491 upstream {F21G4.2},{R07B1.12} 4964 CB6841_redo X 9999591 1 A G 245 1.00 63 62 0 14 14 @gggGgGgggGgggg point 0 nongenic,nongenic -1281 upstream,-478 upstream {F19C6.2a,F19C6.2b},{F19C6.1} 4965 CB6841_redo X 9999681 1 A C 14 1.00 63 14 0 4 4 @CCcc point 0 nongenic,nongenic -1191 upstream,-568 upstream {F19C6.2a,F19C6.2b},{F19C6.1} 5876 CB6841_redo X 10071939 0 X X -1000 -999.99 -1000 -1000 3 0 3 @...Cc indel 0 nongenic,nongenic -2221 upstream,685 downstream {ZC373.4},{ZC373.5} 4966 CB6841_redo X 10130976 1 T G 155 1.00 63 62 2 15 17 @GGGGGGGGG.GG.ggGg point 0 SNP none {haw106550} 4977 CB6841_redo X 10333093 1 G A 255 1.00 63 62 0 18 18 @aAaAAAAAaAAaAaaAAa point 0 nongenic,nongenic -1287 upstream,852 downstream {R07E3.4},{R07E3.3} 4988 CB6841_redo X 10421428 1 G A 255 1.00 63 62 0 19 19 @aaAAAAAaAaAaAAAAaAa point 0 SNP none {haw106854} 4989 CB6841_redo X 10439131 1 C T 255 1.00 63 62 0 24 24 @ttTtttTttttTtTtTtTtttttT point 0 SNP none {haw106868} 4990 CB6841_redo X 10473878 1 G A 255 1.00 63 62 0 28 28 @aaAaAaaAaaaaaaaAAAAAAaaaaAAa point 0 SNP none {haw106890} 4991 CB6841_redo X 10591190 1 G T 255 1.00 63 62 0 23 23 @tttTtTTTttTttTTTtttTttT point 0 SNP none {haw106989} 4992 CB6841_redo X 10594749 1 A C 68 1.00 63 62 2 5 7 @cCccC., point 0 nongenic,nongenic -1484 upstream,-9990 upstream {F57C7.3a},{M79.4} 4994 CB6841_redo X 10795946 1 C A 255 1.00 63 62 1 22 23 @AAaAAaA,AAaAAaAAaAaaaAA point 0 missense GAG->GAT[Glu->Asp] {F31B12.1a} 4996 CB6841_redo X 10845087 1 T C 197 1.00 63 62 0 17 17 @CCCCCCCCCCCCCCCCC point 0 nongenic -485 upstream {C05A9.2} 5001 CB6841_redo X 11166946 1 C A 46 1.00 63 28 1 4 5 @.aAaA point 0 nongenic,nongenic -11879 upstream,3063 into {F13D2.2},{F13D2.1} 5002 CB6841_redo X 11223691 1 C T 3 1.00 63 62 4 4 8 @,TTtT,,, point 0 nongenic -1116 upstream {C34F6.9} 5007 CB6841_redo X 11310929 1 A T 33 1.00 63 62 10 15 25 @,t,,,ttttt,ttt,tt,t,t,,tt point 0 nongenic -778 upstream {F08G12.5} 5883 CB6841_redo X 11492873 2 X X -1000 -999.99 -1000 -1000 8 -7 1 @,....... indel -2 SNP none {uCE6-1222} 5015 CB6841_redo X 11600446 1 C A 255 1.00 63 62 0 22 22 @AaaaAAAAAaAAAAaAaaaAAA point 0 SNP none {haw107592} 5016 CB6841_redo X 11624629 1 T C 255 1.00 63 62 0 17 17 @cccCCcCcccCcccCCc point 0 missense,SNP GAT->GGT[Asp->Gly],none {Y71H9A.1},{haw107616} 5046 CB6841_redo X 11831508 1 C A 255 2.62 63 62 0 20 20 @AAaAaAaaAAaAAAaAAaaa point 0 nongenic 4532 into {C34E11.3} 5047 CB6841_redo X 11831549 1 T C 228 2.62 63 62 0 10 10 @ccCcCCcCCC point 0 nongenic 4491 into {C34E11.3} 5059 CB6841_redo X 12023120 1 C A 255 4.19 63 62 0 20 20 @AAaAAAAAAAAAAaAAAaaA point 0 nongenic -6629 upstream {B0198.2} 5069 CB6841_redo X 12276999 1 A T 100 8.75 63 62 0 9 9 @ttgtttttt point 0 nongenic,nongenic -1398 upstream,-3630 upstream {C04B4.6},{C04B4.1.1} 5070 CB6841_redo X 12277026 1 C A 108 1.00 63 62 0 4 4 @aaaa point 0 nongenic,nongenic -1425 upstream,-3603 upstream {C04B4.6},{C04B4.1.1} 5072 CB6841_redo X 12277112 1 A G 241 1.00 63 62 0 11 11 @ggGGGGggggG point 0 nongenic,nongenic -1511 upstream,-3517 upstream {C04B4.6},{C04B4.1.1} 5073 CB6841_redo X 12277116 1 A T 255 1.00 63 62 0 16 16 @ttTTTTttttTTTttT point 0 nongenic,nongenic -1515 upstream,-3513 upstream {C04B4.6},{C04B4.1.1} 5074 CB6841_redo X 12277171 1 A T 193 2.56 63 62 0 20 20 @tttTTTTTTTTTTTTTTTTT point 0 nongenic,nongenic -1570 upstream,-3458 upstream {C04B4.6},{C04B4.1.1} 5077 CB6841_redo X 12277226 1 C T 3 9.06 0 4 4 19 23 @tTTTTTTT.tTT.TT.TTTttt, point 0 nongenic,nongenic -1625 upstream,-3403 upstream {C04B4.6},{C04B4.1.1} 5079 CB6841_redo X 12277519 1 A G 22 4.50 63 62 86 136 222 @G,G,.,GGGGG,...,Gg,.g.,Gg,GGggG,,G,,GGgGGG.GG,.,GGGGgGGGG,GGg.gGGG,GGG,g.GGGGGGGG,G.GGG,G,.,GGG,Gg. point 0 nongenic,nongenic -1918 upstream,-3110 upstream {C04B4.6},{C04B4.1.1} 5080 CB6841_redo X 12277622 1 T G 255 1.06 63 62 0 61 61 @GGGgGGGGggggGGggGGggggGGgggGGGGGgGGGggGGGGGGggGGGGGGGGggGGGGG point 0 nongenic,nongenic -2021 upstream,-3007 upstream {C04B4.6},{C04B4.1.1} 5085 CB6841_redo X 12277811 1 A G 3 3.19 0 18 13 22 35 @.GGG,,GGGgg,,,,,....GGGggGGGgGGG.GG point 0 nongenic,nongenic -2210 upstream,-2818 upstream {C04B4.6},{C04B4.1.1} 5088 CB6841_redo X 12278048 1 C A 45 7.56 34 62 7 18 25 @AAA.AAAAAAA.AAAAAAa,..,A. point 0 nongenic,nongenic -2447 upstream,-2581 upstream {C04B4.6},{C04B4.1.1} 5092 CB6841_redo X 12278330 1 A C 5 4.94 0 2 0 17 17 @CCcCCCCTCccccCcTT point 0 nongenic,nongenic -2299 upstream,-2729 upstream {C04B4.1.1},{C04B4.6} 5096 CB6841_redo X 12279251 1 T C 6 7.75 0 22 1 8 9 @CCcCccc,C point 0 nongenic,nongenic -1378 upstream,-3650 upstream {C04B4.1.1},{C04B4.6} 5885 CB6841_redo X 12416664 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @....aA indel 0 nongenic,nongenic -2715 upstream,-9061 upstream {F17E5.1a},{T24D3.2.2} 5100 CB6841_redo X 12416665 1 C T 71 1.00 63 62 2 4 6 @tttt., point 0 nongenic,nongenic -2716 upstream,-9059 upstream {F17E5.1a},{T24D3.2.2} 5102 CB6841_redo X 12560995 1 T C 143 1.00 63 62 0 7 7 @AcccCcc point 0 nongenic,nongenic -12995 upstream,-9395 upstream {T24D5.1},{C16D6.2} 5110 CB6841_redo X 12589644 1 T G 40 1.00 63 26 0 6 6 @GGGGGg point 0 nongenic,nongenic -3282 upstream,-7445 upstream {T24D5.2},{T24D5.4} 5112 CB6841_redo X 12642762 1 A G 35 1.00 63 62 2 4 6 @..GGGg point 0 SNP none {haw107971} 5113 CB6841_redo X 12786146 1 G C 255 1.00 63 62 0 28 28 @CCCcCCCcCCccCcCCcccCCCCccccc point 0 missense,SNP TGG->TGC[Trp->Cys],none {T22H6.2a,T22H6.2b},{haw107989} 5114 CB6841_redo X 12795967 1 C A 255 1.00 63 62 0 24 24 @AAAaAaaAaaAAAAAAAAaAAaaa point 0 SNP,three_prime_UTR none,none {haw107990},{T22H6.6a,T22H6.6b} 5116 CB6841_redo X 12877466 1 T G 255 1.00 63 62 0 25 25 @GGgGgGGgggGggGGGGGGggGGgg point 0 missense TCA->GCA[Ser->Ala] {K02A4.1} 5117 CB6841_redo X 12883106 1 A T 255 1.00 63 62 0 24 24 @tTTttTTTtTtTttTTTtttTTTT point 0 nongenic,nongenic,nongenic -24646 upstream,-476 upstream,1596 into {C34E7.1.2},{K02A4.2.2},{K02A4.2.1} 5118 CB6841_redo X 13034301 1 T A 255 1.00 63 62 0 24 24 @aAAAaAAaAaAaaaaaaaaaaAAA point 0 SNP none {haw108272} 5124 CB6841_redo X 13235296 1 T A 53 2.44 63 62 3 11 14 @AAAAAA,aAa,,aa point 0 nongenic,nongenic -2047 upstream,-416 upstream {K08H2.3},{K08H2.2} 5125 CB6841_redo X 13235299 1 T A 67 2.44 63 52 3 11 14 @AAAAAA,aAa,,aa point 0 nongenic,nongenic -2044 upstream,-419 upstream {K08H2.3},{K08H2.2} 5126 CB6841_redo X 13235302 1 T A 91 2.44 63 62 3 11 14 @AAAAA,aAa,,aaa point 0 nongenic,nongenic -2041 upstream,-422 upstream {K08H2.3},{K08H2.2} 5127 CB6841_redo X 13259510 1 T A 255 1.00 63 62 0 15 15 @aaAAAaAAaaaaAaA point 0 nongenic,nongenic -2911 upstream,337 into {K09A11.1},{K08H2.10} 5134 CB6841_redo X 13384402 1 T A 212 1.00 63 62 0 9 9 @AAaAAAaaa point 0 SNP none {haw108496} 5136 CB6841_redo X 13404241 1 T A 14 1.00 63 52 2 3 5 @AAa,, point 0 nongenic,nongenic,splice_donor -5086 upstream,2095 into,none {F02C12.2},{F02C12.1},{F02C12.1} 5137 CB6841_redo X 13437208 1 C T 16 2.12 0 14 0 8 8 @tttttttt point 0 nongenic,nongenic -5688 upstream,832 into {C29F7.5},{C29F7.6} 5138 CB6841_redo X 13443101 1 T C 255 1.00 63 62 0 23 23 @CcCcCCcCCccccCCcCcCCcCc point 0 nongenic,nongenic -1801 upstream,-756 upstream {F02D10.7},{C29F7.7} 5139 CB6841_redo X 13480349 1 T A 255 1.00 63 62 0 14 14 @aaAAaaAAaaaAaa point 0 missense,SNP AAC->ATC[Asn->Ile],none {F15A2.4},{haw108526,uCE6-1345} 5888 CB6841_redo X 13656725 3 X X -1000 -999.99 -1000 -1000 6 -5 1 @,,,.,. indel -3 SNP none {uCE6-1357} 5148 CB6841_redo X 13660272 1 C T 255 1.00 63 62 0 29 29 @TtttTTTTtTtTTTtTtTttttttttttt point 0 nongenic -167 upstream {C04A11.1} 5149 CB6841_redo X 13736122 1 A C 255 1.00 63 62 0 18 18 @ccCCCcCCccCcCCCccc point 0 nongenic -11115 upstream {K11E4.5a} 5150 CB6841_redo X 13737752 1 G T 205 1.00 63 62 0 10 10 @tTTTttTTTT point 0 SNP none {haw108674,uCE6-1361} 5152 CB6841_redo X 13764191 1 A C 3 1.00 63 0 0 4 4 @CCtc point 0 nongenic,nongenic 285 downstream,286 downstream {F55F3.2b},{F55F3.2a} 5154 CB6841_redo X 13764201 1 T G 3 1.00 63 0 1 4 5 @,gggg point 0 nongenic,nongenic 295 downstream,296 downstream {F55F3.2b},{F55F3.2a} 5157 CB6841_redo X 13794619 1 G C 3 1.75 63 0 1 3 4 @C,Cc point 0 nongenic -1098 upstream {ZK1086.2} 5164 CB6841_redo X 14118935 1 A G 141 1.00 63 62 0 11 11 @GGGGGGGGGGg point 0 nongenic,nongenic -8867 upstream,1926 into {F28H6.4},{F28H6.6} 5169 CB6841_redo X 14229404 1 A T 255 6.62 63 62 0 16 16 @ttTttTTttTtttTTt point 0 nongenic,nongenic 185 downstream,921 downstream {K04C1.6},{K06G5.2} 5170 CB6841_redo X 14248169 1 C A 255 1.00 63 62 0 24 24 @aaAAAAAaAaaaAAaaAAaaaaaa point 0 missense GAC->GAA[Asp->Glu] {K04C1.5} 5171 CB6841_redo X 14258903 1 A G 255 1.00 63 62 0 14 14 @gggGGgggGgGggG point 0 nongenic,nongenic -12976 upstream,1013 into {E02H4.1},{E02H4.4} 5891 CB6841_redo X 14363844 1 X X -1000 -999.99 -1000 -1000 5 -3 2 @.,G,,G. indel -1 nongenic -4857 upstream {K04G11.5} 5177 CB6841_redo X 14375235 1 T C 199 1.00 63 62 0 9 9 @cCCcCCcCC point 0 SNP none {uCE6-1407} 5178 CB6841_redo X 14379009 1 T C 48 6.00 63 48 0 10 10 @cCCCcCCCCC point 0 nongenic,nongenic -1757 upstream,-4162 upstream {Y60A9A.1},{Y60A9.3} 5179 CB6841_redo X 14381923 1 G A 255 1.00 63 62 0 13 13 @AaAAAAaaaaaaA point 0 SNP none {haw109439} 5194 CB6841_redo X 14510694 1 G A 172 4.00 63 62 0 10 10 @aaaaaaaaaa point 0 nongenic,nongenic -6932 upstream,532 downstream {M163.1},{D1025.3} 5195 CB6841_redo X 14510701 1 T G 183 3.50 63 62 0 12 12 @gggggggggggg point 0 nongenic,nongenic -6939 upstream,525 downstream {M163.1},{D1025.3} 5196 CB6841_redo X 14573707 1 A G 41 1.00 63 28 1 3 4 @.gGG point 0 nongenic,nongenic,nongenic -4168 upstream,1068 into,4912 into {C44H4.2},{C44H4.1},{H01A20.2} 5198 CB6841_redo X 14577774 1 T A 188 1.00 63 62 0 13 13 @aaaaaaaaaaaaa point 0 nongenic,nongenic -101 upstream,6732 into {C44H4.2},{H01A20.2} 5199 CB6841_redo X 14595719 1 A T 5 1.00 63 62 2 2 4 @Tt.. point 0 three_prime_UTR none {C44H4.8} 5200 CB6841_redo X 14613805 1 C A 255 1.00 63 62 0 20 20 @AAaaAaaaaaAaAAAaaaaa point 0 ncRNA,silent none,CGA->AGA[Arg->Arg] {F54E4.1b},{F54E4.1a} 5204 CB6841_redo X 14637664 1 A C 255 1.00 63 62 0 23 23 @CCccCcCCCccccCccCCcCCCC point 0 nongenic -1335 upstream {F54E4.3} 5210 CB6841_redo X 14766656 1 G C 78 1.00 63 60 0 4 4 @ccCc point 0 silent CCC->CCG[Pro->Pro] {Y16B4A.2} 5211 CB6841_redo X 14767044 1 C G 255 1.00 63 62 0 23 23 @gGggGGggGGgGggGggGgGGgg point 0 missense GAA->CAA[Glu->Gln] {Y16B4A.2} 5212 CB6841_redo X 14771515 1 C A 92 1.00 63 58 1 5 6 @AAAaA, point 0 nongenic,nongenic,nongenic -10630 upstream,-1943 upstream,258 into {C05G5.5},{Y16B4A.1},{Y16B4A.2} 5213 CB6841_redo X 14771516 1 T C 59 1.00 63 62 2 5 7 @CCCcC,. point 0 nongenic,nongenic,nongenic -10631 upstream,-1942 upstream,257 into {C05G5.5},{Y16B4A.1},{Y16B4A.2} 5215 CB6841_redo X 14840456 1 C T 255 1.00 63 62 0 24 24 @TTtTTTtttttTTtTttTTtTttt point 0 nongenic -5401 upstream {C27C12.2} 5223 CB6841_redo X 14913406 1 G T 255 1.00 63 62 0 24 24 @TTtTtTtTTTTtTTTTTtTtTTtt point 0 SNP none {haw110147} 5226 CB6841_redo X 14921904 1 G A 255 1.00 63 62 0 13 13 @AaAAaAaAaaaaA point 0 SNP none {haw110159} 5227 CB6841_redo X 14921912 1 A G 255 1.00 63 62 0 12 12 @gGGgGgGggggG point 0 SNP none {haw110160} 5229 CB6841_redo X 14945493 1 T C 234 1.06 63 62 0 16 16 @CccccccCCccccccc point 0 SNP none {haw110192} 5230 CB6841_redo X 14947970 1 T G 5 1.50 63 4 1 5 6 @GG,ggg point 0 nongenic -1732 upstream {F14F4.3a,F14F4.3b} 5233 CB6841_redo X 14962448 1 A T 158 1.00 63 62 0 7 7 @tttTTtT point 0 nongenic,nongenic -393 upstream,-995 upstream {F45B8.2},{F45B8.3} 5234 CB6841_redo X 15027266 1 T A 255 1.00 63 62 0 21 21 @AaaAAAaAAaAaAAAaaAaAA point 0 nongenic 1039 into {C18B12.2} 5235 CB6841_redo X 15131654 1 A G 93 1.00 63 62 1 5 6 @GGGGg, point 0 nongenic,nongenic -15115 upstream,10501 into {R07D5.2},{R07D5.1} 5236 CB6841_redo X 15192242 1 G T 18 1.00 63 36 1 3 4 @Ttt, point 0 ncRNA none {T10B10.4b} 5244 CB6841_redo X 15226797 1 G T 255 1.06 63 62 0 28 28 @tTTTTTttTTTTTtTtTTTTTTTTTTtt point 0 missense,SNP CCT->CAT[Pro->His],none {H03A11.2},{haw110591} 5245 CB6841_redo X 15226859 1 C T 202 7.06 54 62 31 36 67 @T,,T,,TTt,t,,,TT.,,t.tt,,,t,t..tt,,..t.t,,,.t,,..ttTTttTtTTtttttTTt point 0 silent AAG->AAA[Lys->Lys] {H03A11.2} 5247 CB6841_redo X 15319599 1 T G 3 1.25 63 0 0 4 4 @CGgg point 0 nongenic -2459 upstream {Y15E3A.2} 5248 CB6841_redo X 15447753 1 C T 203 1.31 63 62 0 10 10 @TTTTTTTtTT point 0 nongenic,nongenic -14011 upstream,1103 into {R03A10.6.1},{R03A10.5} 5251 CB6841_redo X 15472090 1 A T 133 8.56 63 62 0 16 16 @ttTTTtTttTtttTTt point 0 nongenic,nongenic -6848 upstream,1374 into {C46E1.2},{C46E1.3} 5254 CB6841_redo X 15520197 1 A G 206 1.00 63 62 0 9 9 @ggGGggGgG point 0 ncRNA none {H30A04.1c} 5262 CB6841_redo X 15643303 1 T G 26 2.00 63 8 1 3 4 @Ggg, point 0 nongenic,nongenic -12964 upstream,444 into {K09E9.4},{H08J19.1} 5263 CB6841_redo X 15722216 1 A G 255 1.00 63 62 0 17 17 @GGGGggGGgGggGgggg point 0 nongenic,nongenic -3834 upstream,1025 into {ZK662.4.1,ZK662.4.2},{ZK662.5} 5270 CB6841_redo X 15809030 1 C T 3 9.38 0 0 8 19 27 @.t..T..TTTTTTTTTTTTTTT.,T.T point 0 nongenic,nongenic -2749 upstream,-4935 upstream {Y7A5A.11},{Y7A5A.7} 5282 CB6841_redo X 15836084 1 A G 246 1.88 63 62 0 14 14 @GGgGGGGgGGGgGG point 0 nongenic,nongenic -5408 upstream,2112 into {F59F4.2},{F59F4.1} 5283 CB6841_redo X 15836927 1 T C 255 1.00 63 62 0 25 25 @CCCccCCCccccccccCcCcccccC point 0 missense ACA->GCA[Thr->Ala] {F59F4.1} 5285 CB6841_redo X 15904379 1 C A 255 1.00 63 62 0 20 20 @AAAAaAAaaAAAAaaAaAaA point 0 nongenic,nongenic -16871 upstream,-6178 upstream {F53H4.3},{F31B9.1} 5286 CB6841_redo X 15904380 1 A C 255 1.00 63 62 0 20 20 @CCcCCccCCCCccCcCcCCc point 0 SNP none {haw111415} 5288 CB6841_redo X 15904862 1 T A 186 1.00 63 62 0 7 7 @aAAAAaA point 0 nongenic,nongenic -17354 upstream,-5695 upstream {F53H4.3},{F31B9.1} 5289 CB6841_redo X 15945619 1 A T 255 1.00 63 62 0 15 15 @TTTTTTTTTttTTtT point 0 SNP none {haw111469} 5290 CB6841_redo X 15945743 1 G T 137 1.00 63 62 0 8 8 @TTTtATtt point 0 nongenic,nongenic,nongenic -6498 upstream,-6550 upstream,1815 into {E03G2.2},{E03G2.4},{E03G2.3} 5291 CB6841_redo X 15945744 1 G T 164 1.00 63 62 0 8 8 @TTTtTTtt point 0 nongenic,nongenic,nongenic -6499 upstream,-6549 upstream,1816 into {E03G2.2},{E03G2.4},{E03G2.3} 5292 CB6841_redo X 15945755 1 A T 155 1.00 63 62 0 7 7 @ttTTTTT point 0 nongenic,nongenic,nongenic -6510 upstream,-6538 upstream,1827 into {E03G2.2},{E03G2.4},{E03G2.3} 5294 CB6841_redo X 16010916 1 G T 255 1.00 63 62 0 25 25 @TTTTTtttTtTTTTTtTtTtTtTTT point 0 SNP none {haw111536} 5295 CB6841_redo X 16010919 1 C A 255 1.00 63 62 0 26 26 @AAAAaaaAaAAAAAaAaAaAaAAAAA point 0 nongenic -14063 upstream {C09G1.4} 5296 CB6841_redo X 16029144 1 A C 150 1.00 63 62 0 8 8 @cccccccc point 0 nongenic -1579 upstream {B0395.2} 5297 CB6841_redo X 16029151 1 T C 115 0.00 63 62 0 5 5 @ccccc point 0 nongenic -1572 upstream {B0395.2} 5300 CB6841_redo X 16102626 1 T G 255 1.00 63 62 0 16 16 @gggGGGGggGgGgGGg point 0 SNP none {CE6-235,haw111583} 5318 CB6841_redo X 16255156 1 G T 255 1.00 63 62 0 16 16 @tTTTtTTTTTtTTTTT point 0 nongenic,nongenic 226 into,398 into {W10G6.2a.2,W10G6.2b},{W10G6.2a.1} 5319 CB6841_redo X 16255668 1 T G 183 8.00 63 62 0 9 9 @ggGGGGGGG point 0 nongenic,nongenic 738 into,910 into {W10G6.2a.2,W10G6.2b},{W10G6.2a.1} 5320 CB6841_redo X 16255669 1 T C 180 8.81 63 62 0 8 8 @cCCCCCCC point 0 nongenic,nongenic 739 into,911 into {W10G6.2a.2,W10G6.2b},{W10G6.2a.1} 5321 CB6841_redo X 16255728 1 T C 240 5.69 63 62 1 14 15 @,CcCCCCcCCCccCC point 0 nongenic,nongenic 798 into,970 into {W10G6.2a.2,W10G6.2b},{W10G6.2a.1} 5322 CB6841_redo X 16255860 1 T A 255 1.00 63 62 0 25 25 @aaAaAaaaaaaAAAAaaaAaaaaaa point 0 SNP none {haw111737} 5905 CB6841_redo X 16256026 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @.,,,,ccc indel 0 nongenic,nongenic -1095 downstream,-1267 downstream {W10G6.2a.2,W10G6.2b},{W10G6.2a.1} 5323 CB6841_redo X 16256027 1 T A 31 1.00 63 48 4 5 9 @AAAA..a.. point 0 nongenic,nongenic 1097 into,1269 into {W10G6.2a.2,W10G6.2b},{W10G6.2a.1} 5325 CB6841_redo X 16460133 1 C A 255 1.00 63 62 0 20 20 @AAaaaAaAAaAAaAaaAaaA point 0 SNP none {haw111863} 5326 CB6841_redo X 16460180 1 C A 255 1.00 63 62 0 23 23 @AaaAAaaAaaAaAAAAaAaaAaa point 0 SNP none {haw111864} 5327 CB6841_redo X 16461404 1 G C 4 2.00 63 62 3 4 7 @.,,ccCC point 0 ncRNA none {F38E9.t2} 5335 CB6841_redo X 16608719 1 G A 61 1.00 63 62 2 4 6 @..aAAa point 0 nongenic,nongenic,nongenic -4646 upstream,-6084 upstream,723 into {C06G1.4.1},{F59C12.4},{F59C12.3} 5336 CB6841_redo X 16661001 1 G T 113 1.00 63 62 0 7 7 @ttttttc point 0 silent CGA->AGA[Arg->Arg] {F43B10.1} 5337 CB6841_redo X 16687504 1 A G 109 1.31 63 62 2 7 9 @..gGgGGGG point 0 nongenic,nongenic -1879 upstream,825 into {F22H10.4},{F22H10.5} 5338 CB6841_redo X 16787261 1 A T 255 1.00 63 62 0 14 14 @ttTttttttTtTTt point 0 SNP none {haw111929} 5339 CB6841_redo X 16817032 1 T C 234 1.00 63 62 0 16 16 @CCccCCCCcCCCccCc point 0 missense AAA->GAA[Lys->Glu] {F41G4.3a,F41G4.3b} 5340 CB6841_redo X 16906464 1 A G 21 1.00 63 4 1 3 4 @,ggg point 0 nongenic -2214 upstream {F39F10.4} 5343 CB6841_redo X 16981399 1 A C 89 1.00 63 62 0 4 4 @CCCC point 0 nongenic,nongenic -20248 upstream,-5351 upstream {K02H8.1,K02H8.1b,K02H8.1c},{F52G3.5} 5344 CB6841_redo X 16981415 1 T C 153 1.00 63 62 0 9 9 @CCCCCCCCC point 0 SNP none {haw111956} 5346 CB6841_redo X 17047302 1 C T 218 1.00 63 62 0 10 10 @tTTTttTTTT point 0 missense GAG->AAG[Glu->Lys] {C30G4.3.1,C30G4.3.2} 5347 CB6841_redo X 17047309 1 T C 208 1.00 63 62 0 9 9 @ccCCCCCcC point 0 silent GAA->GAG[Glu->Glu] {C30G4.3.1,C30G4.3.2} 5348 CB6841_redo X 17047323 1 G T 200 1.00 63 62 0 9 9 @TTtTTTTtT point 0 missense CAG->AAG[Gln->Lys] {C30G4.3.1,C30G4.3.2} 5353 CB6841_redo X 17105478 1 G C 255 1.00 63 62 0 16 16 @cCccCCcCccccccCc point 0 nongenic -690 upstream {C08A9.8} 5354 CB6841_redo X 17168879 1 A G 95 1.00 63 62 1 4 5 @G,GGG point 0 nongenic -11005 upstream {T23C6.5} 5375 CB6841_redo X 17444362 1 A C 19 2.56 0 18 0 9 9 @ccccCcccc point 0 nongenic -7944 upstream {C36E6.2} 5388 CB6841_redo X 17621416 1 A T 255 1.00 63 62 0 16 16 @tTtTtttttTTTttTT point 0 SNP none {haw112084} 5390 CB6841_redo X 17715334 1 G A 255 1.00 63 62 0 22 22 @aaAaaaAaaAaaAaAaaAaAAA point 0 nongenic,nongenic,nongenic 455 into,457 into,589 downstream {cTel55X.1a.2,cTel55X.1b},{cTel55X.1a.1},{6R55.2}