id mutant_strain dna start length reference_base sample_base consensus_score loci_multiplicity mapping_quality neighbor_quality number_wildtype_reads number_variant_reads sequencing_depth sample_reads variant_type indel_size classes descriptions parent_features 1 CB6871_redo I 200948 1 A T 230 1.00 63 62 0 11 11 @tTttttttttt point 0 SNP none {haw293} 2 CB6871_redo I 200949 1 C T 232 1.00 63 62 0 11 11 @tTttttttttt point 0 SNP none {haw294} 4 CB6871_redo I 221369 1 A G 75 1.00 63 26 1 4 5 @,Gggg point 0 silent ACT->ACC[Thr->Thr] {Y48G1BL.6} 12 CB6871_redo I 278120 1 A G 31 1.00 63 46 2 5 7 @,GG,Ggg point 0 nongenic,nongenic -18962 upstream,-1999 upstream {Y48G1BR.1},{C53D5.3} 13 CB6871_redo I 316117 1 T G 255 1.00 63 62 0 21 21 @GGGGgGGGGGgGGgggggGGg point 0 SNP none {haw435,uCE1-530} 23 CB6871_redo I 361325 1 C A 255 1.00 63 62 0 25 25 @aAAaaAAAaaAAAAAAaAaAAaAaA point 0 missense AAG->AAT[Lys->Asn] {R119.1} 24 CB6871_redo I 369897 1 T C 255 1.38 63 62 0 13 13 @cccccccccCCCc point 0 nongenic 1525 into {R119.2} 161430 CB6871_redo I 670360 135 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3922 to 4057 bp into {Y18H1A.14} 4755 CB6871_redo I 774905 0 X X -1000 -999.99 -1000 -1000 4 0 4 @,,,,tTTt indel 0 nongenic,nongenic,nongenic -1442 downstream,-1452 downstream,-28465 upstream {T06A4.1b},{T06A4.1a},{ZC123.3} 43 CB6871_redo I 877664 1 T G 10 1.00 63 30 1 6 7 @GGGg.gg point 0 nongenic,nongenic,nongenic -5255 upstream,2592 into,4182 into {Y95B8A.6a.2},{Y95B8A.10b},{Y95B8A.10a} 47 CB6871_redo I 968802 1 G C 255 1.00 63 62 0 31 31 @cCCCcCCcccCccCCCcCCCccccCcCCccc point 0 nongenic,nongenic,nongenic,nongenic -11426 upstream,627 into,879 downstream,906 downstream {Y34D9B.1a},{F54A5.2},{F54A5.3a},{F54A5.3d} 50 CB6871_redo I 1028166 1 C T 82 2.31 63 38 0 6 6 @TttTtt point 0 nongenic 1747 into {Y34D9A.1} 51 CB6871_redo I 1028195 1 C T 255 1.00 63 62 0 14 14 @ttTtttTTTttTTt point 0 nongenic 1718 into {Y34D9A.1} 65 CB6871_redo I 1100872 1 T G 182 1.00 63 62 1 8 9 @GgGGggGG. point 0 nongenic,nongenic -5073 upstream,-6711 upstream {R06A10.4},{ZK993.2} 66 CB6871_redo I 1142103 1 C A 255 1.00 63 62 0 30 30 @aAAaAaAAAAAAaaAAaAAAaAaaaAAAAa point 0 missense,SNP GGT->TGT[Gly->Cys],none {Y48G8AL.10},{haw1570} 71 CB6871_redo I 1146686 1 C T 34 1.19 63 36 2 4 6 @..tttt point 0 nongenic,nongenic -5662 upstream,4655 into {Y48G8AL.9},{Y48G8AL.10} 72 CB6871_redo I 1146687 1 T G 37 1.19 63 34 2 4 6 @..gggg point 0 nongenic,nongenic -5663 upstream,4656 into {Y48G8AL.9},{Y48G8AL.10} 74 CB6871_redo I 1302563 1 G T 254 2.12 63 62 3 13 16 @.t.ttt,tttttTTTT point 0 nongenic -3012 upstream {K12C11.4} 161431 CB6871_redo I 1318190 72 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 12614 to 12686 bp into {K12C11.4} 161432 CB6871_redo I 1440200 67 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3920 to 3987 bp into {Y92H12BR.8} 4759 CB6871_redo I 1498102 0 X X -1000 -999.99 -1000 -1000 4 -3 1 @,..,gt indel 5 nongenic,nongenic -16661 upstream,-6761 downstream {Y92H12A.4},{Y92H12A.5} 92 CB6871_redo I 1580680 1 A G 20 1.00 63 22 0 5 5 @gGgGc point 0 nongenic,nongenic -5487 upstream,475 downstream {Y73E7A.3},{Y92H12A.1} 93 CB6871_redo I 1580681 1 T A 22 1.00 63 20 0 5 5 @AaAaa point 0 nongenic,nongenic -5486 upstream,476 downstream {Y73E7A.3},{Y92H12A.1} 99 CB6871_redo I 1864004 1 T C 233 1.00 63 62 0 10 10 @CcCCCcccCc point 0 SNP none {haw2851} 100 CB6871_redo I 2033983 1 A G 88 1.00 63 62 9 11 20 @,,gg.,,,,,gGGGGG,GgG point 0 nongenic,nongenic 32 downstream,401 downstream {Y20F4.2},{Y20F4.4} 101 CB6871_redo I 2033985 1 G A 157 1.00 63 62 9 13 22 @,,aa.,,,,,aAAAAA,AaAAa point 0 nongenic,nongenic 34 downstream,399 downstream {Y20F4.2},{Y20F4.4} 106 CB6871_redo I 2379643 1 C T 255 1.00 63 62 0 17 17 @TtTttttTTTTTtTTtT point 0 missense,SNP ATG->ATA[Met->Ile],none {Y39G10AR.17},{snp_Y39G10AR[4]} 107 CB6871_redo I 2554852 1 G C 3 8.31 63 2 3 9 12 @CCC.CCT,CC.C point 0 nongenic,nongenic,nongenic -3260 upstream,-3448 upstream,1758 into {Y23H5B.9},{C55C2.4},{Y23H5B.1} 108 CB6871_redo I 2554854 1 G C 3 9.12 63 2 3 6 9 @.,CTCCC.C point 0 nongenic,nongenic,nongenic -3262 upstream,-3446 upstream,1760 into {Y23H5B.9},{C55C2.4},{Y23H5B.1} 109 CB6871_redo I 2554857 1 G C 3 8.25 63 2 3 5 8 @C,CCC.C. point 0 nongenic,nongenic,nongenic -3265 upstream,-3443 upstream,1763 into {Y23H5B.9},{C55C2.4},{Y23H5B.1} 110 CB6871_redo I 2579329 1 A T 255 1.00 63 62 0 22 22 @TtTTTtTTTttttTTtTtTTTT point 0 nongenic -3307 upstream {C55C2.5a,C55C2.5b,C55C2.5c} 111 CB6871_redo I 2710697 1 T C 255 1.00 63 62 0 33 33 @CCcccCCCCCcccCCCCcCcCcCCCccccCCCC point 0 SNP none {haw4255} 112 CB6871_redo I 2713229 1 A T 255 1.00 63 62 1 15 16 @ttTtTTtTtTtT.ttt point 0 nongenic,nongenic,nongenic 4118 into,4298 into,4322 into {Y71F9B.5b.2},{Y71F9B.5b.1},{Y71F9B.5a} 113 CB6871_redo I 2777373 1 C G 255 1.00 63 62 0 20 20 @GGgggGggggGGggGggggg point 0 five_prime_UTR,silent none,GCG->GCC[Ala->Ala] {Y71F9B.13c},{Y71F9B.13a,Y71F9B.13b} 115 CB6871_redo I 2889894 1 A G 255 1.00 63 62 0 28 28 @gGGGgGgGGgggggGgggggGggggggg point 0 nongenic,nongenic,nongenic -552 upstream,3826 into,458 downstream {Y71F9AL.6},{Y71F9AL.16},{Y71F9AL.7} 116 CB6871_redo I 2921488 1 A G 255 1.00 63 62 0 31 31 @ggGgGggGGGgGggGgGGgGgggGGGgggGg point 0 missense GTA->GCA[Val->Ala] {Y71F9AL.18.1,Y71F9AL.18.2} 117 CB6871_redo I 3146645 1 C T 255 3.94 63 62 0 20 20 @TTTTTtTtTtTTtTttTttt point 0 nongenic,nongenic,nongenic -1351 upstream,-3468 upstream,1150 into {K09H9.2.1},{K09H9.5},{K09H9.6} 124 CB6871_redo I 3485158 1 C A 41 1.12 63 62 4 8 12 @aaaaaaaa,.., point 0 nongenic 657 downstream {Y47G6A.8} 135 CB6871_redo I 3885008 1 A G 255 1.00 63 62 0 26 26 @GgGgGgGgGGgGGggGgGgGGGGGGg point 0 SNP none {haw5911} 136 CB6871_redo I 3885020 1 A G 255 1.00 63 62 0 21 21 @GgGGggGgGgGGGGGGgGggG point 0 SNP none {haw5912} 137 CB6871_redo I 3935098 1 T C 255 1.31 63 62 0 28 28 @cCcCCcCcCCCCCcccCCCcCCCcCCCC point 0 nongenic,nongenic 184 downstream,305 downstream {T21E3.3},{T21E3.1} 138 CB6871_redo I 3935121 1 A C 255 1.50 63 62 0 25 25 @CCCCCcccCCCcCCCcCCCCCCCCC point 0 nongenic,nongenic 161 downstream,328 downstream {T21E3.3},{T21E3.1} 139 CB6871_redo I 3935148 1 G C 186 1.31 63 62 0 13 13 @CCCCCCCCCCCCC point 0 nongenic,nongenic 134 downstream,355 downstream {T21E3.3},{T21E3.1} 141 CB6871_redo I 3990146 1 T C 8 3.44 63 62 127 128 255 @,,CCC.,c,,,,CC,CC,,,CCCC,CCCCCCC,CCCCC,,C,CCC,,,C,,Cc,CCCC,,,CC,CC,,C,CCCC,,,,C,,,CcC,CCC,,CCCC..CC point 0 nongenic -5564 upstream {F28H1.1} 142 CB6871_redo I 3990323 1 T C 255 2.81 63 62 101 154 255 @CC,C,,.CCCCC..Cc.cCCCCCCCCCCCcccCCCC,,ccc.cCC,,c.cccCC,CC,Cc..,C,CCC,cCC,CCCcccC,,,CCCCCCcccc.cc,,C point 0 nongenic -5387 upstream {F28H1.1} 143 CB6871_redo I 3990559 1 T C 6 2.56 63 62 74 181 255 @cccc..ccc.cc,C,.c.cccccc.ccccCC,cc.ccc..c,,C.....cc,Cccccccccc.ccccccc.CC,ccccccc.ccc.ccccccccc.cc. point 0 nongenic -5151 upstream {F28H1.1} 144 CB6871_redo I 4127917 1 G A 255 1.00 63 62 0 33 33 @AAAaaaAAAAaAaAaAaaAAAAaaAAAAaaAaa point 0 SNP none {haw6028} 4764 CB6871_redo I 4184638 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @.,,,Gg indel 0 inframe none {R12E2.1} 149 CB6871_redo I 4220893 1 C T 139 1.00 63 62 1 6 7 @.ttttTt point 0 nongenic,nongenic -5138 upstream,-8684 upstream {C18E3.9a},{C43E11.6a.2,C43E11.6d.1,C43E11.6d.2,C43E11.6e.2} 151 CB6871_redo I 4476753 1 C A 138 1.00 63 62 0 5 5 @aaaaa point 0 SNP none {haw6315} 183 CB6871_redo I 4765803 1 G T 104 4.31 63 62 2 4 6 @tttt,, point 0 premature_stop GAA->TAA[Glu->stop] {M04F3.2} 161433 CB6871_redo I 5032352 81 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered,uncovered,uncovered non-exonic, 3680 to 3761 bp into,non-exonic, 4645 to 4726 bp into,non-exonic, 5197 to 5278 bp into,non-exonic, 8463 to 8544 bp into {C46H11.4f},{C46H11.4e},{C46H11.4c},{C46H11.4d} 194 CB6871_redo I 5185165 1 T A 37 1.00 63 62 2 4 6 @,.AAAA point 0 nongenic,nongenic -1800 upstream,1071 into {F56A3.5},{F56A3.2} 195 CB6871_redo I 5221052 1 C A 255 1.00 63 62 0 39 39 @AAaaaAAaAAAAAAAAaaaAaAAaAAaAaAAaaAAAAAa point 0 nongenic -5830 upstream {C32E12.5.1} 196 CB6871_redo I 5301101 1 C A 255 1.00 63 62 0 31 31 @aAAaaAaAAaaaaaaaAAaaAAaaaAaAAaa point 0 SNP,three_prime_UTR none,none {haw6781,uCE1-872},{C01G8.9a} 197 CB6871_redo I 5448372 1 A T 255 1.00 63 62 0 18 18 @TTTtTTTtTtttTtTttT point 0 SNP none {haw6835} 198 CB6871_redo I 5451259 1 G A 255 1.81 63 62 0 25 25 @AaaaAaAaaAAaAaaAaAAAaaAaa point 0 nongenic -4400 upstream {F27C1.13} 202 CB6871_redo I 6139031 1 A T 255 7.06 63 62 0 18 18 @TttttttttttttTTtTT point 0 nongenic,nongenic 186 downstream,73 downstream {F56F4.6},{F56F4.4} 204 CB6871_redo I 6163210 1 T A 255 1.00 63 62 0 32 32 @AaAAaaAAaAAAAAaAaaAAaAAaAAAAaAaA point 0 SNP none {haw7231} 205 CB6871_redo I 6163280 1 T C 138 1.00 63 46 0 5 5 @CcCCC point 0 nongenic -1612 upstream {T09B4.7} 208 CB6871_redo I 6249990 1 C T 255 1.00 63 62 0 27 27 @TtTtttTtTTTTTtTTtttTtTtTTtt point 0 missense GTG->ATG[Val->Met] {C48E7.10} 210 CB6871_redo I 6366906 1 A T 62 1.00 63 56 1 3 4 @.TTt point 0 nongenic,nongenic,nongenic -1366 upstream,544 into,683 downstream {ZC308.4b},{K04F10.7},{K04F10.1} 212 CB6871_redo I 6801831 1 T C 9 1.00 63 62 2 3 5 @Ccc,, point 0 three_prime_UTR none {E02D9.1b.1,E02D9.1b.2} 213 CB6871_redo I 6820252 1 T C 255 1.00 63 62 0 36 36 @CCcCCcCCCCcCcccCCccCAcCcCCCccccccccc point 0 SNP none {haw7362} 214 CB6871_redo I 6949307 1 A G 240 1.50 63 62 0 20 20 @ggGGggggGggggggggggg point 0 nongenic,nongenic,nongenic,nongenic -1826 upstream,-3949 upstream,1151 into,814 into {T10B11.1},{T10B11.6},{T10B11.7a},{T10B11.7b} 215 CB6871_redo I 6949331 1 T A 180 2.44 63 62 0 14 14 @aaaaaaaAaaaaaa point 0 nongenic,nongenic,nongenic,nongenic -1802 upstream,-3973 upstream,1127 into,790 into {T10B11.1},{T10B11.6},{T10B11.7a},{T10B11.7b} 216 CB6871_redo I 7140681 1 G T 255 1.00 63 62 0 22 22 @TttttttttTTttttttttttt point 0 nongenic,nongenic -708 upstream,405 into {K10D3.4},{H37N21.1} 217 CB6871_redo I 7140819 1 T C 255 1.00 63 62 0 21 21 @CCCCcCcCcCCCCCcCCCCCC point 0 SNP none {haw7427} 218 CB6871_redo I 7140831 1 A T 255 1.00 63 62 0 23 23 @TtTTTTTtTTTTTTTTTTTTTTT point 0 SNP none {haw7428} 219 CB6871_redo I 7301404 1 C G 255 1.00 63 62 0 31 31 @ggGGggGggggGggggGgGgGGGGGgggGgg point 0 missense GGC->GCC[Gly->Ala] {F13G3.5a,F13G3.5b.1,F13G3.5b.2} 220 CB6871_redo I 7428554 1 T C 255 1.00 63 62 0 39 39 @CcCCCCCccCCCCCCcCCCcccCcCCcCcCcCCCCCCcc point 0 SNP none {haw7535} 223 CB6871_redo I 7547117 1 A T 255 1.00 63 62 0 23 23 @ttTTtTTTtTTTttTttTTtttt point 0 SNP none {haw7629} 224 CB6871_redo I 7547127 1 A T 255 1.00 63 62 0 28 28 @tTTTtTTTttTttTTtttttTTtTtttt point 0 SNP none {haw7630} 225 CB6871_redo I 7547365 1 C A 255 1.06 63 62 0 25 25 @aAAAAaaAAaAaaAAAAaAAaAaAa point 0 SNP none {haw7631} 239 CB6871_redo I 7666813 1 T G 130 1.00 63 32 0 4 4 @gGGG point 0 nongenic,nongenic -1728 upstream,-8524 upstream {F26A3.5},{F26A3.4.1} 241 CB6871_redo I 7741844 1 C A 15 7.19 0 14 0 6 6 @aaaaaa point 0 nongenic -13932 upstream {F58H10.1} 246 CB6871_redo I 7753377 1 T C 60 1.00 63 46 1 5 6 @CcCCC. point 0 nongenic -2399 upstream {F58H10.1} 250 CB6871_redo I 7869008 1 T A 135 1.00 63 62 0 5 5 @aaaAa point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -1095 upstream,-749 upstream,2533 into,2614 into,2657 into,2659 into,2668 into,2832 into,2883 into {R11A5.6},{R11A5.4c.1},{R11A5.4d.5},{R11A5.4a.1,R11A5.4a.2,R11A5.4b.2},{R11A5.4c.2},{R11A5.4c.3,R11A5.4d.1,R11A5.4d.3,R11A5.4d.4,R11A5.4d.6},{R11A5.4d.2},{R11A5.4c.4},{R11A5.4b.1} 251 CB6871_redo I 7869009 1 C T 138 1.00 63 62 0 6 6 @tttTtT point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -1096 upstream,-748 upstream,2534 into,2615 into,2658 into,2660 into,2669 into,2833 into,2884 into {R11A5.6},{R11A5.4c.1},{R11A5.4d.5},{R11A5.4a.1,R11A5.4a.2,R11A5.4b.2},{R11A5.4c.2},{R11A5.4c.3,R11A5.4d.1,R11A5.4d.3,R11A5.4d.4,R11A5.4d.6},{R11A5.4d.2},{R11A5.4c.4},{R11A5.4b.1} 252 CB6871_redo I 7879475 1 C T 245 1.00 63 62 0 10 10 @TTttTTTTtT point 0 SNP none {haw7930} 253 CB6871_redo I 7879517 1 G A 154 1.00 63 62 0 6 6 @aAAAAa point 0 nongenic,nongenic -3962 upstream,-4828 upstream {R11A5.7.1},{F55D12.1} 254 CB6871_redo I 7879522 1 A T 206 1.00 63 62 0 7 7 @tTTTTtT point 0 nongenic,nongenic -3967 upstream,-4823 upstream {R11A5.7.1},{F55D12.1} 255 CB6871_redo I 8213805 1 T A 255 8.19 63 62 0 17 17 @aAAAaAaaAaAaAAAAA point 0 nongenic,nongenic,nongenic,nongenic,nongenic -597 upstream,-885 upstream,1387 into,1446 into,493 into {T02E1.3a,T02E1.3c},{T02E1.3b},{T02E1.5a},{T02E1.5b},{T02E1.5c} 256 CB6871_redo I 8303619 1 T C 255 1.00 63 62 0 37 37 @cCccCcCccccCcCcCCccccCCcCCccCcccCCccc point 0 nongenic,nongenic,nongenic 2796 into,2878 into,3940 into {F52B5.1c},{F52B5.1b},{F52B5.1a} 262 CB6871_redo I 8699348 1 A G 17 1.00 63 0 1 3 4 @ggg. point 0 nongenic,nongenic,nongenic -3122 upstream,1040 into,1829 into {F39H11.3},{F39H11.2b},{F39H11.2a} 265 CB6871_redo I 9039720 1 A G 255 1.00 63 62 0 26 26 @GgGGGGGGGgGGGggGGGggGggggG point 0 SNP none {haw8746} 273 CB6871_redo I 9235193 1 C T 255 1.00 63 62 0 27 27 @TTttTTTTttTTttTtTTTTtttTttt point 0 SNP none {haw8914} 274 CB6871_redo I 9235318 1 G A 255 1.00 63 62 0 28 28 @AAAaAAAAaaAaaAAAaAAaAAAAaAaA point 0 SNP none {haw8915} 275 CB6871_redo I 9235427 1 G A 255 1.00 63 62 0 29 29 @AaAaaaaAaAAAaAAAaAAaaAaaAAAaA point 0 nongenic,nongenic,nongenic -1877 upstream,1258 into,758 into {VF36H2L.1},{F36H2.1b},{F36H2.1a,F36H2.1c} 276 CB6871_redo I 9246865 1 C G 255 1.00 63 62 0 32 32 @gGgGgGGggGGGgGgGGGgGGGGggGgGggGG point 0 missense,SNP CGT->CCT[Arg->Pro],none {F36H2.2},{haw8926} 277 CB6871_redo I 9246866 1 G C 255 1.00 63 62 0 31 31 @CcCcCCccCCCcCcCCCcCCCCccCcCccCC point 0 missense,SNP CGT->GGT[Arg->Gly],none {F36H2.2},{haw8927} 278 CB6871_redo I 9262900 1 G T 27 1.00 63 58 3 5 8 @TttTT,,. point 0 nongenic -1267 upstream {F36H2.3} 279 CB6871_redo I 9276110 1 G C 167 1.00 63 56 0 6 6 @CcccCC point 0 nongenic,nongenic -2321 upstream,2571 into {F14B4.2a.1},{F14B4.2b} 280 CB6871_redo I 9346153 1 A C 135 1.00 63 62 0 6 6 @ccccCC point 0 nongenic,nongenic -3665 upstream,1439 into {C12C8.3a,C12C8.3b},{M04C9.2} 281 CB6871_redo I 9346156 1 T C 104 1.00 63 36 0 4 4 @ccCC point 0 nongenic,nongenic -3668 upstream,1442 into {C12C8.3a,C12C8.3b},{M04C9.2} 282 CB6871_redo I 9357394 1 A G 255 1.00 63 62 0 34 34 @ggggggggggggggGgGGGgggggGGGggGgGGG point 0 nongenic,nongenic -1671 upstream,-323 upstream {M04C9.5a},{M04C9.4} 286 CB6871_redo I 9457731 1 G A 255 1.00 63 62 0 44 44 @AaaAAaAAAaAaaAaAAaaaAAAAAaAAAaAaAaAaaAAAaAaa point 0 SNP none {haw9060} 288 CB6871_redo I 9573999 1 T C 255 1.00 63 62 0 26 26 @cCccccCcCcCcCCcCCccCCCccCC point 0 nongenic,nongenic,nongenic,nongenic,nongenic -5777 upstream,162 into,180 into,370 into,794 downstream {C36F7.4d},{C36F7.4a.1},{C36F7.4a.2},{C36F7.4b,C36F7.4c},{C36F7.5} 289 CB6871_redo I 9598055 1 G T 255 1.00 63 62 0 43 43 @tTtTTTTtttttTtTtTtttTTTTTttttTtTttttTttttTt point 0 nongenic,nongenic,nongenic -4961 upstream,-8197 upstream,300 into {K07A1.6},{K07A1.16},{K07A1.7} 290 CB6871_redo I 9699160 1 T C 255 1.00 63 62 0 25 25 @cCcCCCCCccCCccccCcccccCcc point 0 missense,SNP AAT->AGT[Asn->Ser],none {C04F12.8},{haw9282} 293 CB6871_redo I 9737906 1 C A 255 1.00 63 62 0 25 25 @AAAaaAaAAaaAaAAAAAAAAaaaA point 0 SNP none {haw9323} 296 CB6871_redo I 9903066 1 T G 42 1.00 63 62 2 4 6 @,,gGGG point 0 nongenic 195 downstream {F52F12.4} 297 CB6871_redo I 9940580 1 A T 255 1.00 63 62 0 33 33 @TTtTtttTtTtttTTtTtTtTTTtTtTTTTTTt point 0 SNP none {haw9585} 298 CB6871_redo I 9952384 1 C G 65 1.00 63 62 1 3 4 @GGg. point 0 nongenic,nongenic,nongenic -14093 upstream,346 into,990 into {Y106G6A.1},{T24D1.1a},{T24D1.1b} 299 CB6871_redo I 10109254 1 T A 255 1.00 63 62 0 35 35 @aAaaaaAAAAAAAaAAAAaAaaaAAaaAaaaAAaa point 0 SNP none {haw9645} 310 CB6871_redo I 10188886 1 T C 255 1.81 63 62 0 20 20 @CcccccCcccCccccccCCC point 0 silent AAA->AAG[Lys->Lys] {C25A1.10a,C25A1.10b} 317 CB6871_redo I 10239251 1 T G 39 1.75 63 62 5 5 10 @.....gGGgg point 0 nongenic,nongenic -8045 upstream,-9026 upstream {Y106G6E.6.1},{ZC247.3} 320 CB6871_redo I 10270191 1 A C 3 7.44 2 4 13 19 32 @CCCCC,C.ccc.,c.CCCCCCCC,,,,.,c.. point 0 missense TTC->GTC[Phe->Val] {ZC247.1} 321 CB6871_redo I 10315627 1 G A 32 1.38 63 2 2 3 5 @aAA., point 0 nongenic -9848 upstream {T20F10.4} 322 CB6871_redo I 10315628 1 T G 30 1.50 63 2 2 2 4 @GG., point 0 nongenic -9849 upstream {T20F10.4} 342 CB6871_redo I 10436459 1 T G 14 1.00 63 62 1 3 4 @,gGg point 0 nongenic,nongenic,nongenic,nongenic -592 upstream,-646 upstream,206 into,443 downstream {Y106G6H.2a.1},{Y106G6H.2a.2},{Y106G6H.3},{Y106G6H.4} 347 CB6871_redo I 10595968 1 T C 255 1.00 63 62 0 32 32 @CCCcCCCCCcCcccCCCCccccccCcCCCCCC point 0 nongenic,nongenic -2730 upstream,1506 into {T22A3.5},{T22A3.6} 348 CB6871_redo I 10849089 1 G A 43 1.00 63 62 4 4 8 @aAAA.... point 0 nongenic 1006 into {C35E7.1} 375 CB6871_redo I 10978887 1 A G 255 1.00 63 62 0 29 29 @ggGgGGGggGGGgGGgGgggGGgggggGg point 0 silent,SNP TCA->TCG[Ser->Ser],none {Y52B11A.3a,Y52B11A.3b},{haw9930} 376 CB6871_redo I 11001775 1 C A 255 1.00 63 62 0 24 24 @aAAAAaAAAaAAAaAaAAaAAAaa point 0 nongenic,nongenic -13703 upstream,2502 into {Y52B11A.5},{Y52B11A.4} 379 CB6871_redo I 11220200 1 C A 255 1.00 63 62 0 21 21 @AAaaaAaaaaaAaaaAaaAAA point 0 SNP none {haw10216} 386 CB6871_redo I 11424338 1 C G 12 1.00 63 0 0 4 4 @gggg point 0 nongenic,nongenic,nongenic -4723 upstream,355 into,746 downstream {C27C7.3},{C27C7.5},{C27C7.7} 4795 CB6871_redo I 11505539 0 X X -1000 -999.99 -1000 -1000 10 0 10 @,..,,.,.,,aaAA indel 0 nongenic,nongenic,nongenic -1582 downstream,-4518 upstream,-5893 upstream {F32B4.8},{F32B4.1},{K08C9.6} 388 CB6871_redo I 11505540 1 T C 8 1.31 63 8 4 7 11 @CCcCcCC..,, point 0 nongenic,nongenic,nongenic -4516 upstream,-5894 upstream,1581 into {F32B4.1},{K08C9.6},{F32B4.8} 390 CB6871_redo I 11603465 1 A G 223 1.00 63 62 0 8 8 @GGgGGGgg point 0 SNP none {haw10691} 393 CB6871_redo I 11628456 1 A G 255 1.19 63 62 0 23 23 @GgGGGgGggGgGggGGggGgggG point 0 nongenic -1174 upstream {W04G5.3} 394 CB6871_redo I 11629227 1 T C 9 4.19 63 62 20 23 43 @.C,,.cc,Ccc,.cccc,C.c,.c..C,ccc.cc,..C.CC.c point 0 nongenic,nongenic -403 upstream,-826 upstream {W04G5.3},{W04G5.4} 407 CB6871_redo I 11713508 1 C T 186 4.12 63 62 17 28 45 @tgttTttTtttttTttTttttTT,,,.t,t,,,,t,,,tt,,,,, point 0 SNP none {haw10896} 4798 CB6871_redo I 11868444 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @...cC indel 0 nongenic,nongenic -348 upstream,-9349 upstream {Y47H9C.4a,Y47H9C.4b,Y47H9C.4c},{Y47H9C.5a} 408 CB6871_redo I 11883806 1 G C 255 9.06 63 62 0 26 26 @CCCccCcCcCcCcccCCcCccCCcCC point 0 nongenic,nongenic,nongenic -1215 upstream,-15710 upstream,3453 into {Y47H9C.5b},{Y47H9C.4a,Y47H9C.4b,Y47H9C.4c},{Y47H9C.5a} 409 CB6871_redo I 11905377 1 T C 255 1.00 63 62 0 45 45 @cCcCCCCcCCcCcCCCcCCCCcCCcccCCccCcCcccCcCcCCCc point 0 SNP none {haw11247} 410 CB6871_redo I 11975955 1 A T 13 1.38 0 12 0 5 5 @ttttt point 0 nongenic,nongenic -3474 upstream,-4167 upstream {Y53C10A.4},{Y53C10A.15} 411 CB6871_redo I 11975961 1 C A 46 1.25 63 12 0 4 4 @aaaa point 0 nongenic,nongenic -3468 upstream,-4173 upstream {Y53C10A.4},{Y53C10A.15} 412 CB6871_redo I 11988102 1 C T 255 1.00 63 62 0 40 40 @ttttTTTTtTTtttTTTtttttTttttTTttTtTtTTtTt point 0 SNP none {haw11443} 413 CB6871_redo I 12093640 1 T A 190 2.88 50 62 9 38 47 @,,...,,,,AAAAAAAAAAAAAAAAAAaAAAAAAAAAAAAAAAAAAa point 0 nongenic,nongenic -3680 upstream,831 into {Y47H10A.3},{Y47H10A.4} 418 CB6871_redo I 12479848 1 A G 18 5.00 29 4 1 3 4 @,GGg point 0 nongenic,nongenic -1270 upstream,-4321 upstream {T27F6.2},{T27F6.4} 419 CB6871_redo I 12676428 1 G T 102 1.00 63 62 1 6 7 @T,TTTTT point 0 nongenic -2771 upstream {T26E3.2} 420 CB6871_redo I 12862392 1 T A 255 1.00 63 62 0 34 34 @aAaaaAAAaaaaaAagAAAaaAAAAAaaaaaAaa point 0 SNP none {haw13170} 421 CB6871_redo I 12871730 1 T C 255 1.00 63 62 0 30 30 @cCCCCcCcCCccCCCCcCccCCccCCCccc point 0 nongenic,nongenic -2184 upstream,-6853 upstream {Y18D10A.23},{Y18D10A.13} 422 CB6871_redo I 12871733 1 T C 255 1.00 63 62 0 28 28 @CCcCcCCccCCCCcCccCCccCCCcccc point 0 SNP none {uCE1-1387} 425 CB6871_redo I 12899398 1 T G 12 1.75 0 10 0 4 4 @GGGG point 0 nongenic,nongenic -29852 upstream,3373 into {Y18D10A.23},{Y18D10A.13} 426 CB6871_redo I 12910874 1 C T 150 1.38 63 62 0 20 20 @TtTtttttTTTTTTTtTtTT point 0 nongenic -5555 upstream {Y18D10A.25} 429 CB6871_redo I 12963244 1 T A 174 1.00 63 62 10 21 31 @AA,AA.a,,,,AAaaaA,A.Aa,,aAAAaaA point 0 nongenic,nongenic,nongenic -835 upstream,1315 into,806 into {C47B2.1},{C47B2.2a},{C47B2.2b} 430 CB6871_redo I 13015757 1 T C 255 1.00 63 62 0 25 25 @cCCcCCCcCcCCcccCcCCCCcCcc point 0 nongenic,nongenic,nongenic,nongenic -17855 upstream,3550 into,4308 into,7524 into {W05B5.4},{ZK256.1b},{ZK256.1c},{ZK256.1a} 431 CB6871_redo I 13015767 1 T C 255 1.00 63 62 0 24 24 @cCCcccCcCCCCcCccCccCCcaC point 0 nongenic,nongenic,nongenic,nongenic -17845 upstream,3560 into,4318 into,7514 into {W05B5.4},{ZK256.1b},{ZK256.1c},{ZK256.1a} 432 CB6871_redo I 13015797 1 T C 255 6.62 63 62 0 15 15 @CccCCccCCccCccc point 0 nongenic,nongenic,nongenic,nongenic -17815 upstream,3590 into,4348 into,7484 into {W05B5.4},{ZK256.1b},{ZK256.1c},{ZK256.1a} 434 CB6871_redo I 13101703 1 A T 15 1.00 63 30 2 3 5 @ttT.. point 0 missense AAA->AAT[Lys->Asn] {Y26D4A.21} 435 CB6871_redo I 13118108 1 T C 255 8.50 63 62 0 35 35 @CcCCCCCcccccCCccCCCccCcccCccCCcCcCc point 0 nongenic -2971 upstream {C17H1.9} 436 CB6871_redo I 13168446 1 C G 255 1.00 63 62 0 19 19 @GGgGggGgggggggGGGgg point 0 missense,SNP CAC->GAC[His->Asp],none {F22G12.5},{haw13520} 438 CB6871_redo I 13419807 1 T A 255 1.00 63 62 0 19 19 @aaaaaaaAAAAaaAAAAAa point 0 SNP none {haw14087} 441 CB6871_redo I 13482732 1 G T 255 1.19 63 62 0 21 21 @TtTtttTTTtTTTTTttTttt point 0 nongenic,nongenic,nongenic -6815 upstream,-8558 upstream,4661 into {Y48G10A.1.1},{Y48G10A.3},{Y48G10A.2} 452 CB6871_redo I 13584208 1 A C 201 1.50 63 62 0 23 23 @CCCcccCcCccccccccccCCCC point 0 nongenic 1077 into {Y87G2A.9} 454 CB6871_redo I 13613677 1 C T 12 6.00 0 12 0 4 4 @TTTT point 0 nongenic,nongenic,nongenic -10293 upstream,9453 into,9788 into {Y87G2A.13.1},{Y6B3A.1a},{Y6B3A.1c} 461 CB6871_redo I 13768972 1 A T 40 1.00 63 10 0 5 5 @tttTt point 0 missense GAG->GTG[Glu->Val] {Y6B3B.4} 462 CB6871_redo I 13860804 1 C T 142 1.00 63 62 0 11 11 @GGGtttttttt point 0 SNP none {haw14642} 463 CB6871_redo I 13860835 1 G C 255 1.00 63 62 0 18 18 @cccCCCcCCcCCCCCcCC point 0 SNP none {haw14643} 464 CB6871_redo I 13878128 1 A G 14 9.25 0 4 0 4 4 @ggGG point 0 nongenic 9298 into {W04A8.7} 465 CB6871_redo I 13878134 1 A T 38 4.38 26 36 0 5 5 @TtTTt point 0 nongenic 9292 into {W04A8.7} 467 CB6871_redo I 13985036 1 A G 255 1.00 63 62 1 29 30 @GGggGgGg.gGGGgggGggGggGggggggg point 0 missense,SNP AAA->GAA[Lys->Glu],none {Y71A12B.17},{haw14760} 470 CB6871_redo I 14002390 1 T G 245 7.12 63 62 21 53 74 @GGGGGaGG.GAGGGG.GGG.G,GG.....A......G.....GGGGgGGgGggggGGggggg.gggggGgGggG point 0 SNP none {haw14764} 471 CB6871_redo I 14049137 1 T C 255 1.00 63 62 0 20 20 @CccCccCcCCCcCCccCccc point 0 SNP none {uCE1-1488} 472 CB6871_redo I 14097922 1 T C 255 1.00 63 62 0 36 36 @CCCCCcCCCccCCCccCCccCCCCcccccCccccCc point 0 nongenic,nongenic,nongenic -1588 upstream,-3341 upstream,381 into {Y63D3A.2},{Y63D3A.5.1},{Y63D3A.4} 161439 CB6871_redo I 14137882 97 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 4213 to 4310 bp into {K03D10.1} 475 CB6871_redo I 14169346 1 A C 40 1.00 63 34 2 3 5 @cCc,, point 0 nongenic -2504 upstream {C37A5.11} 476 CB6871_redo I 14169348 1 T A 34 1.00 63 40 2 3 5 @aAa,, point 0 nongenic -2502 upstream {C37A5.11} 479 CB6871_redo I 14244891 1 G C 70 1.00 63 62 0 8 8 @ccccCCCC point 0 nongenic,nongenic -1323 upstream,-471 upstream {C49A1.6},{C49A1.10} 487 CB6871_redo I 14347419 1 C A 255 1.00 63 62 0 15 15 @AaaAAaaaaAaAaaa point 0 nongenic,nongenic -3626 upstream,81 downstream {Y105E8A.1},{Y105E8A.2} 488 CB6871_redo I 14349944 1 A C 3 1.00 63 50 2 2 4 @,,CC point 0 nongenic,nongenic,nongenic -6151 upstream,-8566 upstream,2444 into {Y105E8A.1},{Y105E8A.3},{Y105E8A.2} 492 CB6871_redo I 14362092 1 G T 255 1.00 63 62 0 21 21 @ttTtTtTTTTtttTtTTTTtt point 0 SNP none {haw15184} 493 CB6871_redo I 14363822 1 A T 68 3.81 35 62 0 13 13 @ttttttTTTTTTT point 0 nongenic,nongenic -5509 upstream,3757 into {Y105E8A.2},{Y105E8A.3} 494 CB6871_redo I 14363832 1 T C 64 3.00 35 62 0 11 11 @ccCCCCCCCCC point 0 nongenic,nongenic -5519 upstream,3747 into {Y105E8A.2},{Y105E8A.3} 161441 CB6871_redo I 14391805 134 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1485 to 1619 bp into {Y105E8A.7a,Y105E8A.7b} 500 CB6871_redo I 14431046 1 C A 255 1.00 63 62 0 12 12 @AaaaAaaAaAAA point 0 SNP none {haw15294} 502 CB6871_redo I 14480479 1 G A 255 1.00 63 62 0 29 29 @aAaAaAaAaAaAAaaAAaAaaaaaAaAAa point 0 SNP none {haw15337} 503 CB6871_redo I 14518026 1 C G 255 1.25 63 62 0 23 23 @gGgGgGGGGggGGgGggGGGGGG point 0 SNP none {haw15420} 504 CB6871_redo I 14574065 1 A G 32 1.88 14 32 0 21 21 @GggggGGgggGgGgGgggGgg point 0 nongenic,nongenic,nongenic -8233 upstream,4561 into,6747 into {Y105E8A.23a,Y105E8A.23b},{Y105E8A.24b},{Y105E8A.24a} 505 CB6871_redo I 14586339 1 A C 255 1.00 63 62 0 29 29 @cCCcccCCCCCCCccCcccCCCCCcCcCc point 0 SNP none {haw15496} 506 CB6871_redo I 14610358 1 C T 194 1.88 63 62 0 14 14 @tttttttttttttt point 0 nongenic -6231 upstream {Y105E8A.25} 507 CB6871_redo I 14610387 1 G C 89 1.00 63 62 0 4 4 @cccc point 0 nongenic -6260 upstream {Y105E8A.25} 510 CB6871_redo I 14610408 1 T C 118 1.00 63 62 0 4 4 @CCCC point 0 nongenic -6281 upstream {Y105E8A.25} 511 CB6871_redo I 14610447 1 A G 210 1.19 63 62 0 15 15 @GGGGGGGGGGGGGGG point 0 nongenic -6320 upstream {Y105E8A.25} 512 CB6871_redo I 14624752 1 A G 58 1.00 63 62 1 3 4 @GGG, point 0 nongenic,nongenic,nongenic,nongenic,nongenic -4131 upstream,2336 into,3594 into,671 into,673 into {Y105E8B.11},{Y105E8B.1b.2,Y105E8B.1b.3,Y105E8B.1d},{Y105E8B.1a,Y105E8B.1f},{Y105E8B.1b.4,Y105E8B.1c,Y105E8B.1e.3},{Y105E8B.1b.1,Y105E8B.1e.1,Y105E8B.1e.2} 518 CB6871_redo I 14666726 1 A T 95 1.00 63 62 12 22 34 @tTtt.,t.ttTtt.t.t.ttTtt,t.tT.T,t.. point 0 nongenic,nongenic 2289 into,2291 into {Y105E8B.8b.1},{Y105E8B.8a,Y105E8B.8b.2,Y105E8B.8c} 521 CB6871_redo I 14675915 1 A T 255 1.00 63 62 0 26 26 @TTTTTTTTTtTtTTttttTtTttttt point 0 SNP none {haw15602} 539 CB6871_redo I 14918627 1 A C 255 1.00 63 62 0 34 34 @CccCccCCcccCcCCcccCcCCccccCCcCCCCC point 0 SNP none {haw15977} 540 CB6871_redo I 15040328 1 T C 255 1.00 63 62 0 25 25 @CccCccCcCccccCcCCcCcCCCcC point 0 silent,SNP ATT->ATC[Ile->Ile],none {F31C3.2a,F31C3.2b},{haw16048} 551 CB6871_redo I 15071724 1 A G 78 3.75 50 32 0 27 27 @GGGGGGGGGGGGgGGGGGGgGGGGGGg point 0 nongenic -12733 upstream {F31C3.6a} 555 CB6871_redo II 83140 1 C T 21 1.00 63 62 14 19 33 @TtTT,.T.TTT,.T..t,.TT,TTTT,,.Tt,t point 0 nongenic,nongenic -1293 upstream,-5627 upstream {C50D2.6},{C23H3.9a} 161444 CB6871_redo II 503968 180 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1866 to 2046 bp into {T27A1.1} 161445 CB6871_redo II 504200 401 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1413 to 1814 bp into {T27A1.1} 562 CB6871_redo II 507647 1 C T 122 1.00 63 62 12 25 37 @T,tttTtttT,,,Tttt,.TTtTt,tt,TtT,.t.,t point 0 nongenic,nongenic -1633 upstream,596 downstream {T27A1.1},{T27A1.7} 563 CB6871_redo II 523339 1 A G 39 1.00 63 22 1 4 5 @.Gggg point 0 nongenic,nongenic,nongenic -3250 upstream,739 into,747 into {T27A1.4},{T27A1.5a.2,T27A1.5b.2},{T27A1.5a.1,T27A1.5b.1} 564 CB6871_redo II 590163 1 G T 255 1.00 63 62 5 25 30 @TTt,tT.,ttT.tTtt,ttTTTttTTTtTT point 0 nongenic,nongenic 412 downstream,63 downstream {W08F4.10},{W08F4.2} 4812 CB6871_redo II 595628 0 X X -1000 -999.99 -1000 -1000 4 0 4 @,,,,Aa indel 0 nongenic,nongenic,nongenic,nongenic,nongenic -300 downstream,-419 downstream,-423 downstream,-926 upstream,-9849 upstream {W04H10.3a,W04H10.3b.3},{W04H10.3b.2},{W04H10.3b.1},{W08F4.11},{W04H10.2} 584 CB6871_redo II 777128 1 G A 255 1.94 63 62 0 25 25 @aAaAAAaAaaaAAaaaaaaaaAaAa point 0 nongenic 406 downstream {Y39F10A.1} 585 CB6871_redo II 857060 1 A G 15 8.62 31 62 3 3 6 @.C.GG. point 0 nongenic -843 upstream {Y46B2A.2} 588 CB6871_redo II 935804 1 A G 255 1.00 63 62 0 33 33 @GGgGgGGgGGggGgGGGGggGgggGgGGGgGGg point 0 silent AAA->AAG[Lys->Lys] {R07C3.4} 589 CB6871_redo II 959061 1 A T 255 1.00 63 62 0 38 38 @tTtTtttttTTtTttTttTTTtttTTtTTtTTTtTTTt point 0 nongenic,nongenic -1472 upstream,95 into {C32B5.7},{C32B5.16} 592 CB6871_redo II 1293466 1 C T 255 1.00 63 62 3 23 26 @TTttttt.ttttTttttT.t,ttTtT point 0 nongenic,nongenic -202 upstream,-2617 upstream {Y57G7A.7},{Y57G7A.2} 593 CB6871_redo II 1298438 1 A C 33 1.00 63 62 3 7 10 @.,CcCcc.cc point 0 nongenic -61 upstream {Y57G7A.1} 594 CB6871_redo II 1333323 1 C G 255 1.88 63 62 0 21 21 @gggggggggggggggGGGGGG point 0 nongenic,nongenic -3747 upstream,6323 into {F56D12.4b,F56D12.4c.2},{F56D12.4a} 595 CB6871_redo II 1392498 1 T C 255 1.00 63 62 0 27 27 @CccCCcCCcCcCcCcCCCcCccCCccc point 0 nongenic,nongenic 924 downstream,995 downstream {F54D12.3},{F54D12.11} 606 CB6871_redo II 1605235 1 C T 69 3.38 63 62 10 33 43 @.t...TtTt,tt.tt.tTtttTttttt,Ttttt.tt.tttttt point 0 nongenic,nongenic 566 into,620 downstream {C08E3.3},{T07H3.1} 608 CB6871_redo II 1637578 1 C G 255 1.00 63 62 0 21 21 @ggggggggGggGgGGgGGGGG point 0 nongenic 884 into {ZC204.4a,ZC204.4b} 609 CB6871_redo II 1637579 1 G C 255 1.00 63 62 0 20 20 @cccccccCccCcCCcCCCCC point 0 nongenic 885 into {ZC204.4a,ZC204.4b} 611 CB6871_redo II 1850708 1 T C 255 1.00 63 62 0 35 35 @CccCCCCCCcCcccccCccCCcCCcCCCCccCCcc point 0 nongenic,nongenic -307 upstream,-537 upstream {C52E2.7},{C52E2.3} 616 CB6871_redo II 1862306 1 T G 28 2.12 63 0 1 6 7 @.gcgccG point 0 nongenic,nongenic -329 upstream,898 downstream {C16C4.6},{C16C4.7} 618 CB6871_redo II 1893332 1 C A 20 2.06 33 60 13 14 27 @A..aa,,a.Aa.,AaA.AA,,A.aa.. point 0 nongenic,nongenic -1007 upstream,-2547 upstream {C16C4.1},{C16C4.14} 619 CB6871_redo II 1926841 1 T C 21 1.00 63 16 3 8 11 @CccCCCCC.,. point 0 silent GCT->GCC[Ala->Ala] {F52C6.2.1,F52C6.2.2,F52C6.2.3,F52C6.2.4} 620 CB6871_redo II 1944448 1 C T 66 2.12 63 62 11 21 32 @TT,,T.tttTtT,,.TTT.TttTT.T,Tt.t. point 0 missense GGT->GAT[Gly->Asp] {ZK250.6} 622 CB6871_redo II 2001658 1 A C 202 1.88 63 62 0 14 14 @CCCCCCCCcCcCcC point 0 nongenic,nongenic -1719 upstream,-836 upstream {F59H6.5},{C40D2.4} 625 CB6871_redo II 2119161 1 A G 13 2.62 0 12 0 5 5 @GGGGG point 0 nongenic,nongenic -2265 upstream,1011 into {R52.7},{R52.8} 626 CB6871_redo II 2190806 1 T C 255 1.00 63 62 0 31 31 @CcCcCCCCCccCccccCCCcCcCcCCCcccc point 0 nongenic -1347 upstream {C33C12.9} 627 CB6871_redo II 2225250 1 G T 202 2.31 63 62 0 14 14 @ttTTttTtttttTt point 0 nongenic,nongenic,nongenic,nongenic -1708 upstream,460 into,462 into,569 downstream {F54A3.4},{F54A3.5.2},{F54A3.5.1},{F54A3.6} 628 CB6871_redo II 2225256 1 A T 171 1.31 63 62 0 9 9 @tttttTttt point 0 nongenic,nongenic,nongenic,nongenic -1714 upstream,454 into,456 into,563 downstream {F54A3.4},{F54A3.5.2},{F54A3.5.1},{F54A3.6} 629 CB6871_redo II 2225261 1 A C 22 1.00 63 18 0 4 4 @cccc point 0 nongenic,nongenic,nongenic,nongenic -1719 upstream,449 into,451 into,558 downstream {F54A3.4},{F54A3.5.2},{F54A3.5.1},{F54A3.6} 630 CB6871_redo II 2225263 1 A C 19 1.00 63 22 0 5 5 @ccccc point 0 nongenic,nongenic,nongenic,nongenic -1721 upstream,447 into,449 into,556 downstream {F54A3.4},{F54A3.5.2},{F54A3.5.1},{F54A3.6} 631 CB6871_redo II 2225268 1 G T 94 1.00 63 62 0 8 8 @tttttTtT point 0 nongenic,nongenic,nongenic,nongenic -1726 upstream,442 into,444 into,551 downstream {F54A3.4},{F54A3.5.2},{F54A3.5.1},{F54A3.6} 632 CB6871_redo II 2225271 1 A C 97 1.00 63 62 1 10 11 @cctccCcCCC. point 0 nongenic,nongenic,nongenic,nongenic -1729 upstream,439 into,441 into,548 downstream {F54A3.4},{F54A3.5.2},{F54A3.5.1},{F54A3.6} 636 CB6871_redo II 2472169 1 C T 190 1.00 63 62 0 11 11 @ttttttttttt point 0 SNP none {haw20431} 637 CB6871_redo II 2559387 1 C T 156 1.00 63 62 4 13 17 @Ttt,TtTTTT.T,T,Tt point 0 nongenic,nongenic -5888 upstream,1558 into {F09D1.1},{K02F6.9} 641 CB6871_redo II 2799760 1 A T 255 1.00 63 62 0 16 16 @tTttTTTttttTTTTt point 0 SNP none {haw21113} 642 CB6871_redo II 2843349 1 G C 154 1.00 63 62 0 7 7 @cccCCCC point 0 nongenic -161 upstream {Y110A2AL.7} 643 CB6871_redo II 2881248 1 A G 17 1.00 63 10 2 3 5 @ggg,, point 0 nongenic,nongenic 2296 into,678 into {Y110A2AL.12a},{Y110A2AL.12b} 644 CB6871_redo II 2881249 1 T C 10 1.00 63 16 2 2 4 @cc,, point 0 nongenic,nongenic 2297 into,677 into {Y110A2AL.12a},{Y110A2AL.12b} 647 CB6871_redo II 2897370 1 A G 15 8.31 0 14 0 6 6 @gggggg point 0 nongenic,nongenic -2975 upstream,637 into {Y110A2AL.14.1},{Y110A2AM.3} 651 CB6871_redo II 2898896 1 T A 18 1.31 63 62 42 50 92 @A,aa..aA,Aa....a.aA.aA,aAa.aAa.A..aaAAaa.,aA,aaAa.Aa,..a..a.,A,.A.a,AaAA,,a.AAa.A,,,A.,,A,.a point 0 nongenic,nongenic -4501 upstream,1450 into {Y110A2AL.14.1},{Y110A2AM.3} 652 CB6871_redo II 2900766 1 A T 182 1.00 63 62 0 6 6 @TTtttT point 0 three_prime_UTR none {Y110A2AM.4} 653 CB6871_redo II 2900772 1 T A 193 1.00 63 62 0 6 6 @AAaaaA point 0 three_prime_UTR none {Y110A2AM.4} 161447 CB6871_redo II 2900779 83 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 222 to 305 bp into {Y110A2AM.4} 654 CB6871_redo II 2900872 1 C A 202 1.00 63 62 0 8 8 @AaAaAaAA point 0 three_prime_UTR none {Y110A2AM.4} 655 CB6871_redo II 2900873 1 G T 192 1.00 63 62 0 9 9 @TtTtTtTTT point 0 three_prime_UTR none {Y110A2AM.4} 657 CB6871_redo II 2912494 1 A T 15 2.62 0 10 0 5 5 @TTTTt point 0 nongenic,nongenic -8495 upstream,1079 into {Y110A2AM.1},{Y110A2AR.2} 661 CB6871_redo II 2925946 1 G C 4 1.00 63 32 2 3 5 @.,CcC point 0 missense CGC->CCC[Arg->Pro] {ZK355.2a.1,ZK355.2a.2,ZK355.2b} 669 CB6871_redo II 2997919 1 G T 116 1.62 63 56 5 7 12 @TtTTTtT...,. point 0 nongenic,nongenic -759 upstream,904 into {K08A2.1.2},{K08A2.1.1} 670 CB6871_redo II 2997920 1 A G 56 1.75 63 54 4 6 10 @GGGgTg..,. point 0 nongenic,nongenic -758 upstream,905 into {K08A2.1.2},{K08A2.1.1} 671 CB6871_redo II 3113170 1 G A 255 1.00 63 62 7 29 36 @A,,AaAaa,AA,AAa,AaAA..AaaaAAaaAaaaAA point 0 missense AGG->AAG[Arg->Lys] {Y25C1A.2} 672 CB6871_redo II 3123933 1 G T 255 1.00 63 62 4 30 34 @tTtT,t,tt,tttTTTttTtTTtTtTtTT.tttT point 0 missense ATG->ATT[Met->Ile] {T10D4.5} 673 CB6871_redo II 3159620 1 A T 109 8.56 63 62 4 9 13 @ttttttt,,t,,t point 0 nongenic -539 upstream {Y27F2A.7} 681 CB6871_redo II 3168542 1 T G 58 6.31 63 4 2 2 4 @.,GG point 0 nongenic,nongenic -9461 upstream,219 downstream {Y27F2A.7},{Y27F2A.5} 684 CB6871_redo II 3172297 1 G C 5 1.00 63 0 1 4 5 @CCc.c point 0 nongenic,nongenic -25 upstream,-5663 upstream {Y27F2A.10},{Y27F2A.3a} 685 CB6871_redo II 3172298 1 G C 3 1.00 63 0 1 3 4 @Cc.c point 0 nongenic,nongenic -26 upstream,-5662 upstream {Y27F2A.10},{Y27F2A.3a} 688 CB6871_redo II 3278964 1 T A 255 1.00 63 62 0 35 35 @aAaaaaaaAaaaaAAAaaAaAAAAaAaAAAaaaaA point 0 SNP none {haw22209} 698 CB6871_redo II 3463687 1 G A 174 1.00 63 62 9 24 33 @AaaAaAAAaa,a.AA.aA..a,AaA,aAa.A.a point 0 nongenic,nongenic -497 upstream,462 downstream {C16C8.9},{C16C8.10} 704 CB6871_redo II 3532125 1 C G 172 6.00 63 62 0 8 8 @gggggggg point 0 nongenic,nongenic,nongenic -3614 upstream,470 downstream,758 downstream {W09G10.3},{W09G10.4a},{W09G10.4b} 705 CB6871_redo II 3532191 1 G C 229 5.81 63 62 0 12 12 @cCCcCCCCCCCC point 0 nongenic,nongenic,nongenic -3680 upstream,404 downstream,692 downstream {W09G10.3},{W09G10.4a},{W09G10.4b} 707 CB6871_redo II 3650567 1 C A 255 1.00 63 62 0 35 35 @AaaaaaaaaaAaAAaAaaaaAAaaaaAAaaaAAaA point 0 nongenic -682 upstream {F19B10.11} 708 CB6871_redo II 3796556 1 C T 115 2.38 63 62 31 224 255 @,,,,TTTTTT.G,tTTgtTT..t..T,.TTTT,ttTG,,TTT.TT,TGTGGGTGGTGGGTt.tTG,TGGTGTTGGgtttTTTGTGGGGTGTGGtTTTTG point 0 silent ACC->ACT[Thr->Thr] {Y8A9A.2} 4828 CB6871_redo II 3796666 0 X X -1000 -999.99 -1000 -1000 17 22 39 @,,,,,,....,,..g..ag.gggggGGGGGGGGGGG indel 0 inframe none {Y8A9A.2} 711 CB6871_redo II 3797053 1 A T 8 6.75 35 44 21 24 45 @.,.,,....T,Tt.tt.,..ttttt.t.tt,t.ttt..ttttttt point 0 missense CAT->CTT[His->Leu] {Y8A9A.2} 713 CB6871_redo II 3797266 1 T A 64 4.62 63 62 12 37 49 @.aa,AA.aA.a,,A.Aa.AAAAAaAAAAaAAGa.AaaAAAA,aaA.A.a point 0 missense CTG->CAG[Leu->Gln] {Y8A9A.2} 714 CB6871_redo II 3797353 1 A T 237 3.62 63 62 19 36 55 @TTT.TTTTT.TT.T..TT.T.TTtt,T.TT.tTtT...TtTT..,T.tTT..ttt point 0 missense CAT->CTT[His->Leu] {Y8A9A.2} 723 CB6871_redo II 4102299 1 A C 176 1.00 63 62 2 11 13 @ccCCCCCC,.cGG point 0 nongenic -6901 upstream {T08H4.2} 724 CB6871_redo II 4104059 1 T G 7 1.00 63 16 1 3 4 @,ggg point 0 nongenic -5141 upstream {T08H4.2} 725 CB6871_redo II 4142478 1 C G 255 1.00 63 62 0 14 14 @gGGggggGGGgggg point 0 nongenic -331 upstream {F56D3.1.2} 726 CB6871_redo II 4142481 1 G A 255 1.00 63 62 0 15 15 @AAaaaaAAAaaaaaa point 0 nongenic -328 upstream {F56D3.1.2} 727 CB6871_redo II 4142501 1 A T 255 1.00 63 62 0 22 22 @ttTTtttTTTttTTTTTTTttT point 0 nongenic -308 upstream {F56D3.1.2} 4829 CB6871_redo II 4273307 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @..,,Cc indel 0 nongenic,nongenic -14531 upstream,-2900 upstream {C16A11.8},{C01F1.4} 731 CB6871_redo II 4375086 1 A C 32 1.00 63 2 3 4 7 @CccC.,. point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -3743 upstream,-392 upstream,-68 upstream,1367 into,1636 into,1651 into,621 into {B0286.1},{B0286.4c.2,B0286.4c.5},{B0286.4b},{B0286.4a.2,B0286.4c.6,B0286.4c.7,B0286.4c.8,B0286.4d},{B0286.4a.1},{B0286.4c.3,B0286.4c.4},{B0286.4c.1} 732 CB6871_redo II 4398912 1 T C 46 1.00 63 12 1 3 4 @CCc. point 0 nongenic,nongenic -6942 upstream,5936 into {ZK430.5},{ZK430.8} 733 CB6871_redo II 4398913 1 A T 13 1.00 63 46 3 3 6 @TTt.,. point 0 nongenic,nongenic -6941 upstream,5935 into {ZK430.5},{ZK430.8} 734 CB6871_redo II 4399212 1 G C 45 1.00 63 30 1 4 5 @,CaCc point 0 nongenic,nongenic -6642 upstream,5636 into {ZK430.5},{ZK430.8} 737 CB6871_redo II 4468036 1 G T 255 1.00 63 62 0 22 22 @TTtttttttTTTTttTTTtttt point 0 SNP none {haw24704} 738 CB6871_redo II 4468046 1 G T 255 1.00 63 62 0 20 20 @tttTTTTttTTTttttTtTt point 0 nongenic,nongenic -114 upstream,159 downstream {W06B4.2},{W06B4.3} 739 CB6871_redo II 4499374 1 G C 255 1.00 63 62 0 24 24 @CCCcCCCcCCcCCCcCccccCccc point 0 SNP none {haw24761} 740 CB6871_redo II 4597347 1 C T 255 1.00 63 62 0 21 21 @TTttTtTtTtttTtTttTTTT point 0 nongenic,nongenic,nongenic,nongenic,nongenic -659 upstream,1644 into,2664 into,3996 into,641 into {M03A1.6a},{M03A1.6c},{M03A1.6d},{M03A1.6e},{M03A1.6b} 741 CB6871_redo II 4628109 1 C T 255 1.00 63 62 0 33 33 @TTTtttttTTtTTtttTTTTTTTTttttTtTTt point 0 three_prime_UTR none {F35D11.11c} 742 CB6871_redo II 4642240 1 C T 106 7.00 33 2 0 17 17 @aAtTTttTTttttTTTt point 0 nongenic,nongenic -3910 upstream,-6841 upstream {F35D11.11a,F35D11.11b,F35D11.11c},{Y74E4A.1b} 759 CB6871_redo II 4782898 1 G A 8 1.00 63 34 2 2 4 @,,aA point 0 nongenic -1561 upstream {F26G1.6} 760 CB6871_redo II 4782899 1 A G 35 1.00 63 8 2 4 6 @,,gGGg point 0 nongenic -1562 upstream {F26G1.6} 761 CB6871_redo II 4815800 1 C T 255 1.00 63 62 0 34 34 @TtttttTttttTTTTTTtTTTTtttTTTTttTTT point 0 nongenic -3673 upstream {C33F10.5d.1} 762 CB6871_redo II 4831918 1 C G 13 1.00 63 2 1 3 4 @ggG, point 0 nongenic,nongenic -4082 upstream,538 into {C33F10.13},{C33F10.2} 4843 CB6871_redo II 4841269 0 X X -1000 -999.99 -1000 -1000 3 0 3 @.,,Gg indel 0 nongenic,nongenic -3547 upstream,150 downstream {C33F10.12},{T23B7.2} 765 CB6871_redo II 4862022 1 C T 255 1.00 63 62 0 32 32 @TTTtTtTtTtTtttTttttTtTTtTttTTTTT point 0 nongenic,nongenic 279 downstream,431 downstream {F11G11.9},{F11G11.4} 773 CB6871_redo II 4929759 1 C A 255 1.31 63 62 0 25 25 @AaaAaaAaaAaaAaaaAaAaaAAAA point 0 SNP none {haw25053} 774 CB6871_redo II 4964576 1 C A 255 1.00 63 62 0 24 24 @AAAaaAaAaaaaaAAaaAaAAaaa point 0 SNP none {haw25061} 775 CB6871_redo II 5006740 1 A G 69 1.00 63 44 2 4 6 @gGgG,. point 0 silent GGA->GGG[Gly->Gly] {F59A6.4} 776 CB6871_redo II 5021688 1 C G 18 1.00 63 46 3 4 7 @GGGG... point 0 nongenic -1059 upstream {F59A6.1} 4847 CB6871_redo II 5028912 0 X X -1000 -999.99 -1000 -1000 5 -1 4 @....A,g indel 0 nongenic -1056 downstream {F59A6.1} 781 CB6871_redo II 5079263 1 G C 9 1.00 63 2 2 2 4 @,,cC point 0 silent GGC->GGG[Gly->Gly] {C27A2.6} 784 CB6871_redo II 5144265 1 C T 255 1.00 63 62 0 28 28 @tTTTtTTtttTtTttTtttTTTttTTtT point 0 nongenic 282 downstream {F58A6.1} 786 CB6871_redo II 5185654 1 G C 255 1.00 63 62 0 23 23 @CCcCcCCCccCCCcccCCCCCcc point 0 missense,SNP CCT->CGT[Pro->Arg],none {C27D6.4c},{haw25156,uCE2-1607} 787 CB6871_redo II 5191923 1 T G 38 1.00 63 62 2 5 7 @..Ggggg point 0 nongenic,nongenic -2389 upstream,-4369 upstream {C34F11.6},{C27D6.4b.1} 788 CB6871_redo II 5205715 1 C G 62 1.00 63 54 3 6 9 @..,gggGGG point 0 nongenic,nongenic,nongenic,nongenic 2231 into,2384 into,2413 into,2421 into {C34F11.3c},{C34F11.3b},{C34F11.3a.2},{C34F11.3a.1} 789 CB6871_redo II 5205716 1 G C 54 1.00 63 62 3 7 10 @..,cccCCCC point 0 nongenic,nongenic,nongenic,nongenic 2232 into,2385 into,2414 into,2422 into {C34F11.3c},{C34F11.3b},{C34F11.3a.2},{C34F11.3a.1} 790 CB6871_redo II 5219642 1 A G 13 1.00 63 62 4 4 8 @GGgg,.., point 0 five_prime_UTR none {C34F11.9b} 791 CB6871_redo II 5222113 1 T C 9 1.00 63 0 2 3 5 @,.cCc point 0 nongenic,nongenic,nongenic,nongenic -2230 upstream,-7945 upstream,3235 into,3240 into {C34F11.9b},{EGAP2.2},{C34F11.9c},{C34F11.9a} 799 CB6871_redo II 5231227 1 T G 157 1.00 63 62 0 6 6 @gggGgG point 0 nongenic,nongenic -174 upstream,747 downstream {EGAP2.1},{EGAP2.2} 800 CB6871_redo II 5231250 1 A C 255 1.00 63 62 0 12 12 @cccCcCCccCCC point 0 nongenic,nongenic -151 upstream,770 downstream {EGAP2.1},{EGAP2.2} 824 CB6871_redo II 5322089 1 T A 255 1.00 63 62 0 29 29 @aaAaAAaAAAAAAAAAaAAAAaaagAaAa point 0 nongenic -890 upstream {F08B1.1a.3,F08B1.1c.1} 825 CB6871_redo II 5368119 1 C T 255 1.00 63 62 0 26 26 @ttTtTTTTTTttTtTttTTtTttTTT point 0 silent TTG->TTA[Leu->Leu] {F09E5.12} 828 CB6871_redo II 5563746 1 T G 10 1.19 63 58 3 4 7 @.,,GggG point 0 nongenic,nongenic -2308 upstream,249 downstream {C17C3.2},{C17C3.3} 829 CB6871_redo II 5635095 1 C G 255 1.00 63 62 0 26 26 @gGgGGgGgGggGgggGgGGgGggGgG point 0 missense,SNP GAA->CAA[Glu->Gln],none {F59E12.8},{haw25459} 830 CB6871_redo II 5647429 1 C T 255 1.00 63 62 0 34 34 @TtttTTtttTttTTtTttTTtTtTtTTTTtTTTt point 0 silent,SNP AAG->AAA[Lys->Lys],none {F59E12.10},{haw25466} 831 CB6871_redo II 5661841 1 C G 122 1.00 63 44 0 5 5 @GgggA point 0 nongenic,nongenic,nongenic,nongenic -3539 upstream,319 downstream,681 into,703 into {C25H3.15},{C25H3.6c},{C25H3.6b},{C25H3.6a} 835 CB6871_redo II 5716162 1 T C 255 1.00 63 62 0 29 29 @ccCCCCcCccCcCCcCCCCCcCCccCccC point 0 silent AAT->AAC[Asn->Asn] {C18A3.9} 836 CB6871_redo II 5723522 1 G T 211 1.94 63 62 0 11 11 @tAtTTTTtTTT point 0 nongenic,nongenic 1178 into,1791 into {C18A3.6b.1},{C18A3.6a,C18A3.6b.2} 837 CB6871_redo II 5775940 1 C T 32 1.00 63 62 4 6 10 @TTtTTT.,,, point 0 nongenic -6975 upstream {K05F1.6a} 838 CB6871_redo II 5776751 1 C T 255 1.00 63 62 0 21 21 @ttttTtTtttTtttTtttTtT point 0 nongenic -6164 upstream {K05F1.6a} 840 CB6871_redo II 5861710 1 C A 14 1.00 63 10 1 4 5 @AaaA, point 0 nongenic,nongenic -2451 upstream,-3318 upstream {F55C12.7.1,F55C12.7.2,F55C12.7.3},{F55C12.4} 845 CB6871_redo II 5863711 1 G A 87 1.00 63 36 0 4 4 @aaAA point 0 nongenic,nongenic -450 upstream,-5319 upstream {F55C12.7.1,F55C12.7.2,F55C12.7.3},{F55C12.4} 846 CB6871_redo II 5913353 1 C T 255 1.00 63 62 0 28 28 @tttTTTttttTTTttTTtTTtttTTTtT point 0 nongenic,nongenic,nongenic -774 upstream,2064 into,831 into {F59G1.1a},{F59G1.1b.1,F59G1.1c.2,F59G1.1d.3},{F59G1.1b.2,F59G1.1c.1,F59G1.1d.2,F59G1.1d.5} 847 CB6871_redo II 5925275 1 T C 255 1.00 63 62 1 35 36 @CcCCcCCcccCcCCCCCCCCcCCccccCCCcCCcc. point 0 nongenic,nongenic,nongenic -8182 upstream,470 downstream,850 downstream {F28B12.2a},{F28B12.3.1},{F28B12.3.2} 848 CB6871_redo II 5931438 1 G C 7 1.00 63 24 2 3 5 @,.cCc point 0 nongenic -2019 upstream {F28B12.2a} 4871 CB6871_redo II 5941664 0 X X -1000 -999.99 -1000 -1000 5 -4 1 @.....GgG indel 0 nongenic,nongenic,nongenic -1288 upstream,-765 downstream,892 downstream {F28B12.1a},{F28B12.1b},{F28B12.2a} 849 CB6871_redo II 5960458 1 C T 255 1.00 63 62 0 32 32 @TtTtTtTtttTttTTttttTTttTttttttTt point 0 SNP none {haw25654} 850 CB6871_redo II 5974545 1 C T 19 1.00 63 32 1 3 4 @,TTt point 0 silent AGG->AGA[Arg->Arg] {B0034.5} 851 CB6871_redo II 5983703 1 T A 158 1.00 63 62 0 5 5 @aAAAA point 0 nongenic,nongenic -4795 upstream,-8774 upstream {ZK75.2},{B0034.5} 852 CB6871_redo II 5983705 1 C T 158 1.00 63 62 0 5 5 @tTTTT point 0 nongenic,nongenic -4793 upstream,-8776 upstream {ZK75.2},{B0034.5} 4874 CB6871_redo II 5990758 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @,,.,cc indel 0 nongenic,nongenic -48 upstream,-5599 upstream {ZK75.3},{ZK75.1} 853 CB6871_redo II 6020951 1 C T 255 1.00 63 62 0 38 38 @tTTttttTTTTTTTtttTTTttttTTTTTTttTttttt point 0 premature_stop CGA->TGA[Arg->stop] {ZK84.1} 857 CB6871_redo II 6187713 1 T C 51 9.50 63 62 4 6 10 @...c.CcCCC point 0 nongenic -400 upstream {F40H3.6} 860 CB6871_redo II 6451387 1 A T 255 1.00 63 62 0 52 52 @TTtTTTTtTTttTTTTtTtTtTtTTTTttttTTttttTtTttttTtTtTTtT point 0 SNP none {haw25895} 861 CB6871_redo II 6452021 1 C T 255 1.00 63 62 0 37 37 @tTttttTtTtTTTtTtTtTTTtTTtTttTTtTTtTTt point 0 nongenic,nongenic,nongenic,nongenic -2262 upstream,-2903 upstream,1041 into,908 into {K06A1.4.1},{K06A1.1},{K06A1.5.1},{K06A1.5.2} 864 CB6871_redo II 6524923 1 C T 255 1.00 63 62 0 37 37 @TtTTTTTTttTtttTTtTTTTTTtttTtTtTTTtTtt point 0 silent CTC->CTT[Leu->Leu] {C56E6.2} 865 CB6871_redo II 6527423 1 G A 255 1.00 63 62 0 33 33 @AaAAAAAAAAaaaAAAAAaaaaaaAAaAAAaAa point 0 silent,SNP ATC->ATT[Ile->Ile],none {C56E6.4},{haw25905} 866 CB6871_redo II 6527424 1 A T 255 1.00 63 62 0 34 34 @TtTTTTTTTTtttTTTTTttttttTTtTTTtTtT point 0 missense,SNP ATC->AAC[Ile->Asn],none {C56E6.4},{haw25906} 4880 CB6871_redo II 6539462 1 X X -1000 -999.99 -1000 -1000 2 0 2 @,, indel -1 SNP none {snp_C56E6[1]} 870 CB6871_redo II 6559524 1 T C 4 1.00 63 62 2 2 4 @cC,. point 0 three_prime_UTR none {F18C5.10.1} 871 CB6871_redo II 6578375 1 C T 255 1.00 63 62 0 25 25 @TTTttTttttttttTtTTttttTTt point 0 silent CTG->CTA[Leu->Leu] {C56C10.5} 4883 CB6871_redo II 6620906 0 X X -1000 -999.99 -1000 -1000 3 1 4 @,.,gGG indel 0 nongenic,nongenic,nongenic,nongenic -11600 upstream,-1194 downstream,-1231 upstream,-965 downstream {C56C10.12},{F54H5.4b},{F54H5.3},{F54H5.4a} 872 CB6871_redo II 6656985 1 T C 59 6.62 63 40 5 6 11 @ccCCcC,.,., point 0 nongenic,nongenic,nongenic -2653 upstream,-3235 upstream,1829 into {T19D12.9},{T19D12.3},{T19D12.10} 876 CB6871_redo II 6657794 1 G A 59 1.00 63 38 0 4 4 @AAAA point 0 nongenic,nongenic,nongenic -2426 upstream,-3462 upstream,1020 into {T19D12.3},{T19D12.9},{T19D12.10} 877 CB6871_redo II 6669138 1 G C 160 1.00 63 62 2 17 19 @ccccccccccccccccc,, point 0 silent TCG->TCC[Ser->Ser] {T19D12.1} 878 CB6871_redo II 6680878 1 C T 255 1.00 63 62 0 29 29 @TtTtTTtttTTTttTTtTTTTTtttttTT point 0 missense GCA->GTA[Ala->Val] {C18H9.8} 879 CB6871_redo II 6687963 1 C T 255 1.00 63 62 0 36 36 @TtttttTtTtttTTtTttTttTttTtTTtTttttTt point 0 missense CCA->TCA[Pro->Ser] {C18H9.3} 880 CB6871_redo II 6718342 1 T C 55 1.00 63 16 0 4 4 @cCCc point 0 nongenic,nongenic,nongenic -135 upstream,-161 upstream,636 downstream {T14B4.4a.1},{T14B4.4a.2,T14B4.4b.2},{T14B4.5} 885 CB6871_redo II 6719833 1 C T 64 1.00 63 62 1 3 4 @,TTt point 0 nongenic,nongenic,nongenic 289 into,363 into,537 downstream {T14B4.4a.1,T14B4.4a.2,T14B4.4b.2},{T14B4.4b.1},{T14B4.8} 4890 CB6871_redo II 6720673 0 X X -1000 -999.99 -1000 -1000 1 1 2 @,Ccc indel 0 nongenic,nongenic,nongenic -302 downstream,477 downstream,551 downstream {T14B4.8},{T14B4.4b.1},{T14B4.4a.1,T14B4.4a.2,T14B4.4b.2} 887 CB6871_redo II 6724148 1 A C 74 1.00 63 18 4 7 11 @CccCcCc,,,. point 0 nongenic -2584 upstream {T14B4.8} 889 CB6871_redo II 6727391 1 T G 39 1.00 63 62 3 5 8 @ggGGg,,. point 0 SNP none {haw25948} 161448 CB6871_redo II 6730772 66 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2886 to 2952 bp into {T14B4.9} 898 CB6871_redo II 6736304 1 C G 255 1.00 63 62 0 26 26 @GGGgGGGgggGgGggGgGggGgggGG point 0 missense,SNP TCC->TGC[Ser->Cys],none {T14B4.2},{haw25953} 899 CB6871_redo II 6736306 1 T C 255 1.00 63 62 0 28 28 @CCCcCCCcccCcCccCcCccCcccCCcc point 0 missense,SNP TTC->CTC[Phe->Leu],none {T14B4.2},{haw25954} 903 CB6871_redo II 6745223 1 A C 23 1.00 63 62 2 4 6 @,,CCCc point 0 nongenic,nongenic -552 upstream,196 downstream {F41G3.17},{F41G3.16} 904 CB6871_redo II 6745251 1 A C 255 1.00 63 62 0 16 16 @CCCcCCCcccCCCCCC point 0 nongenic,nongenic -580 upstream,168 downstream {F41G3.17},{F41G3.16} 905 CB6871_redo II 6755908 1 A T 255 1.00 63 62 0 39 39 @TtTTttTTttTtTTTttTTttTttTTTtTttTTTTtttT point 0 SNP none {haw25965} 4896 CB6871_redo II 6759239 0 X X -1000 -999.99 -1000 -1000 2 -1 1 @,.gGGG indel 1 frameshift none {F41G3.2} 906 CB6871_redo II 6759240 1 C T 12 1.00 63 20 1 7 8 @,ttTTTTt point 0 missense CCC->TCC[Pro->Ser] {F41G3.2} 907 CB6871_redo II 6759798 1 A T 237 1.00 63 62 0 10 10 @tTttttttTt point 0 nongenic,nongenic,nongenic 568 into,824 downstream,936 downstream {F41G3.2},{F41G3.12},{F41G3.3} 913 CB6871_redo II 6762603 1 C T 255 1.00 63 62 0 29 29 @ttTTTtTtttTTTtttttTTTtTtTttTt point 0 SNP none {haw25977} 916 CB6871_redo II 6766065 1 C T 255 1.00 63 62 0 25 25 @TtttTtTTtTTTttTTTTtTTTTTT point 0 SNP none {haw25988} 917 CB6871_redo II 6766211 1 C T 255 1.00 63 62 0 35 35 @tTttTtttTTTTTtTttTTtTttttTttTtTTttt point 0 SNP none {haw25989} 918 CB6871_redo II 6808829 1 A G 255 1.00 63 62 0 36 36 @GGggGgggggggGGgGgggGggGggGGgGggggggG point 0 SNP none {haw26048} 919 CB6871_redo II 6818451 1 A G 11 1.00 63 56 4 5 9 @,,,,ggggG point 0 nongenic -9605 upstream {F31E8.1} 920 CB6871_redo II 6878056 1 C T 255 1.00 63 62 0 21 21 @TTTtTttTTTtTTttTTTTTT point 0 SNP none {haw26160} 921 CB6871_redo II 6896314 1 T A 255 1.00 63 62 0 30 30 @AaAaAAaAaaaaAaaAAaAaaaAAAAAaAA point 0 SNP none {haw26186} 922 CB6871_redo II 6908080 1 A C 5 5.69 63 38 3 7 10 @,,,CCCCcCC point 0 nongenic,nongenic,nongenic -1928 upstream,-385 upstream,-850 upstream {B0252.2},{B0252.3b},{B0252.3a.1} 923 CB6871_redo II 6908081 1 C T 38 5.69 63 4 2 8 10 @,,TTTTtTTT point 0 nongenic,nongenic,nongenic -1927 upstream,-386 upstream,-851 upstream {B0252.2},{B0252.3b},{B0252.3a.1} 924 CB6871_redo II 6908985 1 C T 255 1.00 63 62 0 30 30 @TTtttttttttttttTttTTtTtTTttTTt point 0 SNP none {haw26205} 927 CB6871_redo II 6944910 1 G A 58 1.00 63 62 2 4 6 @AAAa,. point 0 nongenic,nongenic,nongenic,nongenic -6103 upstream,1975 into,2914 into,669 into {F22D3.5},{F22D3.2b},{F22D3.2a},{F22D3.2c} 928 CB6871_redo II 6999734 1 C A 255 1.00 63 62 0 26 26 @AaaaAAAaAaAAaAAaaAaAAAAAAA point 0 SNP none {haw26262} 930 CB6871_redo II 7003347 1 T A 255 1.00 63 62 0 33 33 @aAAaAaAAAaaaAAAAAAaAAaAaAAAaaaaAa point 0 missense GTA->GAA[Val->Glu] {C52E12.2a,C52E12.2b} 933 CB6871_redo II 7123163 1 T C 226 1.94 63 62 0 19 19 @ccccccccccccccccccc point 0 nongenic,nongenic,nongenic -1432 upstream,-1441 upstream,983 into {F10E7.3},{F10E7.11},{F10E7.2} 936 CB6871_redo II 7216400 1 G A 255 1.00 63 62 0 43 43 @AaAaAAaaAaaAAAAAAAAAaaAaAAaaAaaaaAAAaaaAaaA point 0 nongenic,nongenic,nongenic -4300 upstream,-615 upstream,498 into {E04F6.9},{E04F6.12},{E04F6.10} 937 CB6871_redo II 7233100 1 G A 255 1.00 63 62 0 37 37 @aaAAaaaAAaaaaaAAaaAAAAaAaaaaaAAaAaAaA point 0 nongenic 308 into {F32A5.3} 938 CB6871_redo II 7272353 1 C A 255 1.00 63 62 0 26 26 @aAAaaaAAAAaaaAAAAAAAaAAAaa point 0 nongenic -2318 upstream {C30G12.3} 939 CB6871_redo II 7343871 1 C G 77 1.00 63 14 1 4 5 @gggG. point 0 nongenic,nongenic,nongenic,nongenic,nongenic -13730 upstream,-2576 upstream,4669 into,4696 into,4703 into {F21D12.5},{F21D12.1c.1},{F21D12.1a},{F21D12.1d},{F21D12.1c.2,F21D12.1e} 940 CB6871_redo II 7343872 1 G C 15 1.00 63 62 3 4 7 @cccC.,, point 0 nongenic,nongenic,nongenic,nongenic,nongenic -13731 upstream,-2575 upstream,4670 into,4697 into,4704 into {F21D12.5},{F21D12.1c.1},{F21D12.1a},{F21D12.1d},{F21D12.1c.2,F21D12.1e} 4904 CB6871_redo II 7403159 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @..,Cc indel 1 nongenic,nongenic -513 upstream,-5272 upstream {C07D10.4},{K02A2.2} 941 CB6871_redo II 7403160 1 C A 36 1.00 63 62 0 4 4 @aAAa point 0 nongenic,nongenic -514 upstream,-5270 upstream {C07D10.4},{K02A2.2} 943 CB6871_redo II 7444113 1 T A 7 1.50 63 0 2 2 4 @,,aa point 0 nongenic -2496 upstream {Y9D1A.1} 944 CB6871_redo II 7444114 1 A C 7 1.50 63 6 2 2 4 @,,cc point 0 nongenic -2495 upstream {Y9D1A.1} 945 CB6871_redo II 7479111 1 T C 35 1.00 63 6 2 2 4 @,,cC point 0 five_prime_UTR none {D1022.1a} 946 CB6871_redo II 7479112 1 C G 35 1.00 63 6 2 2 4 @,,gG point 0 five_prime_UTR none {D1022.1a} 948 CB6871_redo II 7506629 1 C A 49 1.00 63 30 3 4 7 @,.,aAaa point 0 nongenic,nongenic 660 downstream,98 downstream {C28F5.2},{C28F5.1} 949 CB6871_redo II 7506632 1 A G 163 1.00 63 48 3 8 11 @,.,gGggGggg point 0 nongenic,nongenic 101 downstream,657 downstream {C28F5.1},{C28F5.2} 951 CB6871_redo II 7528858 1 T C 56 1.00 63 62 1 3 4 @ccc, point 0 nongenic,nongenic -719 upstream,724 downstream {ZK1290.5},{ZK1290.6} 952 CB6871_redo II 7567934 1 G A 255 1.00 63 62 0 39 39 @aaaaAAaAaaAAaaaaaaaAaaaAAaaAAAAaAaaaaaa point 0 nongenic -2601 upstream {F35D2.3} 953 CB6871_redo II 7573659 1 A G 12 3.81 63 56 3 3 6 @.,.ggg point 0 nongenic -722 upstream {F35D2.2} 954 CB6871_redo II 7618212 1 G A 91 1.00 63 62 0 7 7 @aAAaaaa point 0 SNP,three_prime_UTR none,none {haw26758},{R07G3.8} 955 CB6871_redo II 7618213 1 T G 99 1.00 63 62 0 7 7 @gGGgggg point 0 three_prime_UTR none {R07G3.8} 956 CB6871_redo II 7618214 1 G T 66 1.00 63 62 1 7 8 @tTTttt.t point 0 three_prime_UTR none {R07G3.8} 957 CB6871_redo II 7625206 1 T G 73 1.00 63 28 1 5 6 @,gGGgg point 0 nongenic -4760 upstream {R07G3.8} 4913 CB6871_redo II 7634324 0 X X -1000 -999.99 -1000 -1000 3 -2 1 @,.,tTTT indel 2 nongenic,nongenic,nongenic -161 upstream,-6329 downstream,-7141 downstream {R153.1a},{R153.1b,R153.1c,R153.1d,R153.1e},{R153.1g} 958 CB6871_redo II 7634326 1 T G 107 1.00 63 14 2 6 8 @.,gGGGgG point 0 nongenic,nongenic,nongenic -163 upstream,6332 into,7144 into {R153.1a},{R153.1b,R153.1c,R153.1d,R153.1e},{R153.1g} 960 CB6871_redo II 7640559 1 A C 11 1.00 63 24 2 2 4 @,,CC point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -6396 upstream,10607 into,1532 into,2523 into,9328 into,9358 into,964 downstream {R153.1a},{R153.1g},{R153.1d},{R153.1c},{R153.1b},{R153.1e},{R153.1f} 963 CB6871_redo II 7642132 1 T G 25 1.00 63 62 3 9 12 @C...CCgGgGGg point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -38 upstream,-41 upstream,7755 into,7785 into,9034 into,950 into {R153.1f},{R153.1d},{R153.1b},{R153.1e},{R153.1g},{R153.1c} 964 CB6871_redo II 7667313 1 G A 255 1.00 63 62 0 30 30 @AaAaaaaAAAAaaaAaAAAAaAAaaaaAaA point 0 nongenic,nongenic -606 upstream,276 downstream {F18A1.4a},{F18A1.5} 969 CB6871_redo II 7698554 1 A T 44 1.00 63 60 0 5 5 @TtCtt point 0 SNP none {haw26816} 970 CB6871_redo II 7698555 1 C A 61 1.00 63 44 0 4 4 @aAaa point 0 SNP none {haw26817} 971 CB6871_redo II 7698556 1 T C 80 1.00 63 44 0 5 5 @CccCc point 0 nongenic,nongenic,nongenic,nongenic -124 upstream,-136 upstream,-621 upstream,43 downstream {B0495.5.1},{B0495.5.2},{B0495.2},{B0495.6} 972 CB6871_redo II 7698791 1 T G 28 1.00 63 62 2 3 5 @,,gGG point 0 nongenic,nongenic,nongenic,nongenic -359 upstream,-371 upstream,-386 upstream,167 into {B0495.5.1},{B0495.5.2},{B0495.2},{B0495.6} 976 CB6871_redo II 7698884 1 G C 82 1.00 63 10 0 4 4 @cCCc point 0 missense GCC->GGC[Ala->Gly] {B0495.6} 161449 CB6871_redo II 7743767 96 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered non-exonic, 1445 to 1541 bp into,non-exonic, 18940 to 19036 bp into {B0228.4e},{B0228.4a,B0228.4c} 982 CB6871_redo II 7756610 1 C T 255 1.00 63 62 0 33 33 @ttttTTttTTTtTTttTtttTtTttTTTtTTTT point 0 missense ACA->ATA[Thr->Ile] {B0228.1} 983 CB6871_redo II 7799888 1 G T 105 1.00 63 62 5 11 16 @,.,,,tTtTTTttTtT point 0 nongenic,nongenic -11282 upstream,-5638 upstream {T05A6.1},{C06A8.9} 4922 CB6871_redo II 7803627 0 X X -1000 -999.99 -1000 -1000 6 -2 4 @..,,..cc indel 0 nongenic,nongenic -7544 upstream,-9377 upstream {T05A6.1},{C06A8.9} 985 CB6871_redo II 7871212 1 G A 27 1.00 63 58 2 4 6 @.,aaAa point 0 missense CCT->CTT[Pro->Leu] {T01H3.3.1,T01H3.3.2} 986 CB6871_redo II 7883746 1 C G 79 1.19 63 42 0 5 5 @GGGGG point 0 nongenic -9413 upstream {ZK675.1.1,ZK675.1.2} 987 CB6871_redo II 7913323 1 C A 255 1.00 63 62 0 40 40 @AaaAAAAAAAAAAAAAAaAAAaAAAaAAAAAaaaaaAAAa point 0 SNP none {haw26997} 988 CB6871_redo II 7960769 1 C G 255 1.00 63 62 0 36 36 @GGggGgGggggGgggggGGgGGGggGGggGggGggg point 0 SNP none {haw27047} 989 CB6871_redo II 7993826 1 G A 255 1.00 63 62 0 30 30 @AAAaAaaaAaaAaaaaaaAaaAaaAaAAAA point 0 missense GAT->AAT[Asp->Asn] {DH11.4} 990 CB6871_redo II 8033056 1 C G 31 1.00 63 32 2 3 5 @ggG., point 0 nongenic -416 upstream {C08B11.4} 991 CB6871_redo II 8033057 1 A C 33 1.00 63 30 2 3 5 @ccC., point 0 nongenic -417 upstream {C08B11.4} 995 CB6871_redo II 8071797 1 G A 255 1.00 63 62 0 40 40 @AAaAAaaaAAaaaaAaaAAaAAaaAaAaaAaaAaaaAAaA point 0 nongenic,nongenic,nongenic,nongenic -1176 upstream,-3892 upstream,1495 into,1506 into {T05H10.7b.2},{K02C4.2},{T05H10.7b.1},{T05H10.7a} 996 CB6871_redo II 8088848 1 G A 255 1.00 63 62 1 34 35 @aaAaAaaAAaaaaaaAaaaaaaaAAA.AAaAAaaA point 0 premature_stop CAA->TAA[Gln->stop] {K02C4.4} 997 CB6871_redo II 8089315 1 G A 255 1.00 63 62 0 32 32 @aaaAAaaaaaAAAaAAaaAaaAaAaAAAaaAa point 0 missense CTT->TTT[Leu->Phe] {K02C4.4} 4924 CB6871_redo II 8187015 0 X X -1000 -999.99 -1000 -1000 2 0 2 @..Tt indel 0 nongenic,nongenic,nongenic,nongenic -2061 upstream,-303 downstream,-519 downstream,529 downstream {T05C12.6c},{T05C12.7.2},{T05C12.7.1},{T05C12.8} 998 CB6871_redo II 8210524 1 G T 20 1.00 63 22 3 4 7 @tTtt... point 0 nongenic,nongenic -2243 upstream,69 downstream {M110.8},{M110.2} 999 CB6871_redo II 8227927 1 G C 255 1.00 63 62 0 32 32 @cCCCCCCCCccCCcCCcCCccccccCccCCcC point 0 missense CGC->CCC[Arg->Pro] {M110.5a.1,M110.5a.2,M110.5b,M110.5c,M110.5d} 1000 CB6871_redo II 8227928 1 C G 255 1.00 63 62 0 34 34 @gGGGGGGGGggGGgGGgGGggggggGggGGgGGG point 0 silent CGC->CGG[Arg->Arg] {M110.5a.1,M110.5a.2,M110.5b,M110.5c,M110.5d} 1002 CB6871_redo II 8262652 1 C T 81 5.94 63 62 9 15 24 @.TT.TTT.T.....tt.TTTTTTt point 0 nongenic,nongenic -1940 upstream,-3589 upstream {K01C8.1.1},{F35C11.6} 1004 CB6871_redo II 8263031 1 G A 40 3.19 63 62 11 19 30 @,a,a,aaaaaa,aaaa,aa,,,,a,,aaaa point 0 nongenic,nongenic -1561 upstream,-3968 upstream {K01C8.1.1},{F35C11.6} 1005 CB6871_redo II 8265366 1 G A 255 1.00 63 62 0 18 18 @aaaaaaaaaaaaaAAAAa point 0 nongenic,nongenic,nongenic,nongenic,nongenic -6303 upstream,244 into,246 into,248 into,774 into {F35C11.6},{K01C8.1.3},{K01C8.1.4},{K01C8.1.2},{K01C8.1.1} 1008 CB6871_redo II 8300081 1 G A 255 1.00 63 62 0 31 31 @aAAAaaaaaaaaaaaaaAaaAaaaaaaaaaA point 0 nongenic -4752 upstream {F14F11.2} 1009 CB6871_redo II 8438629 1 G A 255 1.00 63 62 0 30 30 @AaAAAaaaaaAaaaaaAAaaaaaaaAAaAA point 0 nongenic,nongenic -1562 upstream,-451 upstream {F14E5.3},{F14E5.5} 1010 CB6871_redo II 8441214 1 G A 255 1.00 63 62 0 41 41 @aaAaAAAaaaAaAAaaAAaAAaaAaAaAaaAAaaaaaAAAA point 0 nongenic,nongenic,nongenic -1487 upstream,-4147 upstream,869 into {F22B5.2},{F14E5.3},{F14E5.5} 1011 CB6871_redo II 8584093 1 C T 255 1.00 63 62 0 19 19 @TtTTttTTTTtttTTTTTt point 0 missense,SNP GGA->GAA[Gly->Glu],none {F54C9.11},{haw27317} 1012 CB6871_redo II 8715377 1 C T 255 1.00 63 62 0 28 28 @tTTTtTTtTtTtTTTtttTTTTTttTTt point 0 SNP none {haw27384} 1013 CB6871_redo II 8742553 1 G A 255 1.00 63 62 0 31 31 @AaAAaAAaAAaaAAAAaaaaAAaaAAaaAAA point 0 nongenic,nongenic -1101 upstream,-5067 upstream {K08F8.1b.2},{T01B7.8} 4929 CB6871_redo II 8798261 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @,.,,Gg indel 0 nongenic,nongenic -2756 upstream,-4179 upstream {F07H5.8},{F07H5.7} 1018 CB6871_redo II 8802488 1 T G 255 1.00 63 62 0 36 36 @gGgggGGGGggGgGGGgggGgGGgggggggGgggGg point 0 silent,SNP TCT->TCG[Ser->Ser],none {F07H5.8},{haw27428} 1020 CB6871_redo II 8835793 1 G A 255 1.00 63 62 0 28 28 @aaaaAAAaAaAaaAaAAaaaaaAaAaaA point 0 nongenic,nongenic -571 upstream,-6582 upstream {F46C5.4},{F46C5.2.1} 1021 CB6871_redo II 8861766 1 G A 255 1.00 63 62 0 39 39 @AAaaaAaaAAAAAaaAaaAaaaaaAAAaaAAaaaAaAAa point 0 nongenic,nongenic -2224 upstream,535 into {T14D7.3},{T07D4.1} 1029 CB6871_redo II 8894955 1 C T 255 1.00 63 62 0 20 20 @TttTTTtTTTtttTTTTTtt point 0 SNP none {haw27502} 1030 CB6871_redo II 8896590 1 C T 20 1.00 63 52 3 5 8 @.,,ttTTt point 0 nongenic,nongenic -171 upstream,-209 upstream {B0457.1a,B0457.1b},{B0457.1c} 1031 CB6871_redo II 8896591 1 T C 53 1.00 63 20 3 7 10 @.,,ccCCcCc point 0 nongenic,nongenic -170 upstream,-208 upstream {B0457.1a,B0457.1b},{B0457.1c} 4933 CB6871_redo II 8896592 1 X X -1000 -999.99 -1000 -1000 12 -9 3 @.,,..,,.,.,. indel -1 SNP none {uCE2-1805} 1032 CB6871_redo II 8907371 1 C T 255 1.00 63 62 0 23 23 @ttTTTTttttTTTtTTTttTTTT point 0 SNP none {haw27506} 1033 CB6871_redo II 8916732 1 G A 215 1.00 63 62 0 9 9 @AaAAaaaaa point 0 nongenic,nongenic -4781 upstream,-5639 upstream {B0457.4},{B0457.6} 1037 CB6871_redo II 8931751 1 C T 255 1.00 63 62 0 20 20 @TtTTTtttTTTTTttTTTTT point 0 nongenic,nongenic,nongenic,nongenic,nongenic -264 upstream,-265 upstream,829 into,847 into,893 downstream {T21B10.2b.1},{T21B10.2a.1},{T21B10.2c.2},{T21B10.2c.1},{T21B10.1} 1039 CB6871_redo II 8996332 1 C T 255 1.00 63 62 0 29 29 @TttTTtTTTtTTTTtttTTttTtTTTTTt point 0 missense CAC->TAC[His->Tyr] {F44G4.2.1,F44G4.2.2,F44G4.2.3} 1041 CB6871_redo II 9090950 1 G T 11 1.00 63 0 3 5 8 @.,,TTTtT point 0 nongenic 174 downstream {C07H4.1} 1042 CB6871_redo II 9092377 1 C T 255 1.00 63 62 0 25 25 @TtTTTtTTtttttTTTtTtttTttT point 0 SNP none {haw27664} 1043 CB6871_redo II 9234923 1 C T 52 1.00 63 62 2 6 8 @,.TttTTt point 0 missense TCC->TTC[Ser->Phe] {T26C5.2} 1044 CB6871_redo II 9322175 1 T C 11 1.00 63 10 3 4 7 @ccCC.,. point 0 nongenic,nongenic,nongenic -1708 upstream,184 into,372 downstream {D2013.10},{D2013.1},{D2013.2} 1045 CB6871_redo II 9322176 1 C A 10 1.00 63 10 3 4 7 @aaAA.,. point 0 nongenic,nongenic,nongenic -1707 upstream,185 into,373 downstream {D2013.10},{D2013.1},{D2013.2} 1046 CB6871_redo II 9331348 1 C T 255 1.00 63 62 0 32 32 @tttTttttTtTTttttTtttttTttttttttt point 0 SNP none {haw27818} 1048 CB6871_redo II 9419089 1 A G 12 1.00 63 56 2 4 6 @..GGgg point 0 nongenic,nongenic,nongenic -1313 upstream,852 downstream,884 downstream {M176.4},{M176.3.1},{M176.3.2} 1049 CB6871_redo II 9419090 1 G C 57 1.00 63 12 1 5 6 @.CCccc point 0 nongenic,nongenic,nongenic -1312 upstream,853 downstream,885 downstream {M176.4},{M176.3.1},{M176.3.2} 1050 CB6871_redo II 9428872 1 G A 255 1.00 63 62 0 22 22 @AaaAAaaAaAaaAaaaAaaAAa point 0 SNP none {haw27856} 1051 CB6871_redo II 9436563 1 C T 255 1.00 63 62 0 35 35 @TTttTttttTTttTttTtTTTttTTTttTtTTTtT point 0 SNP none {haw27860} 1052 CB6871_redo II 9490848 1 G A 17 1.00 63 62 4 6 10 @aaAaAa,,,. point 0 nongenic -2666 upstream {T19H5.4a} 4945 CB6871_redo II 9547899 0 X X -1000 -999.99 -1000 -1000 4 0 4 @..,,cccc indel 0 nongenic 633 downstream {AH6.10} 1059 CB6871_redo II 9872488 1 C T 255 1.00 63 62 0 28 28 @TttTtttTTTTttttttTtTTttttTTT point 0 missense GTT->ATT[Val->Ile] {C08H9.14} 1060 CB6871_redo II 9947665 1 C T 255 1.00 63 62 0 23 23 @tTTttttTtTtTTttTtTtTTTT point 0 nongenic,nongenic,nongenic -7442 upstream,620 downstream,755 downstream {R53.3a,R53.3b},{R53.1a.1},{R53.1a.2,R53.1b.1,R53.1b.2} 1061 CB6871_redo II 9960571 1 G T 255 1.00 63 62 0 42 42 @tttTtTtTtTTtttTTTTTTTtttttttTTTTtTTTTTTtTt point 0 ncRNA none {R53.3c} 1062 CB6871_redo II 9989252 1 C T 255 1.00 63 62 0 26 26 @TTTTTtTtttTtTtttTtTtTTTTtT point 0 nongenic,nongenic -2039 upstream,-7581 upstream {ZK892.1a,ZK892.1b},{ZK892.7} 1063 CB6871_redo II 10019098 1 A C 255 3.75 63 62 0 27 27 @cccCccCcccCcccccccccCCCCCCc point 0 nongenic -3114 upstream {F52H3.7a} 1064 CB6871_redo II 10151685 1 T C 255 1.00 63 62 0 36 36 @CCcccCcccCCCccCcccCCccccCCcccCccCcCc point 0 nongenic,nongenic,nongenic -3661 upstream,-7569 upstream,684 into {F33H1.6},{F27E5.3},{F27E5.2} 1065 CB6871_redo II 10186213 1 C T 255 1.00 63 62 0 36 36 @TttTttTttTTtTttTtttTTTtttTTTttTTTtTt point 0 missense GCT->ACT[Ala->Thr] {R05H5.1} 1067 CB6871_redo II 10330972 1 C T 255 1.00 63 62 0 35 35 @TtttttTTtTTTTttTttTtTttTttTtttTTttt point 0 silent TGC->TGT[Cys->Cys] {M02G9.1a,M02G9.1b} 1070 CB6871_redo II 10339269 1 T C 115 4.62 63 62 3 4 7 @...CCcC point 0 nongenic,nongenic 344 downstream,498 downstream {C07E3.2.1},{C07E3.2.2} 1071 CB6871_redo II 10340121 1 T G 255 1.00 63 62 0 33 33 @gGggGGGGGGgggggggGGggggggggGggggg point 0 missense CAT->CCT[His->Pro] {C07E3.2.1,C07E3.2.2} 1072 CB6871_redo II 10367892 1 C T 255 1.00 63 62 0 24 24 @TTTttTtttttttTtttTTTtTtt point 0 missense CGA->CAA[Arg->Gln] {C07E3.6} 1073 CB6871_redo II 10409217 1 C T 255 1.00 63 62 0 27 27 @tttTttttTTTtTTTtTTTTTttttTT point 0 nongenic -1993 upstream {E04D5.5} 1074 CB6871_redo II 10412617 1 C T 255 1.00 63 62 0 38 38 @ttttTTTtttTtTTtTttTttTTtTtTtttTTTTtTtT point 0 nongenic,nongenic -4090 upstream,136 downstream {E04D5.1a.1},{E04D5.5} 4951 CB6871_redo II 10430280 1 X X -1000 -999.99 -1000 -1000 6 -3 3 @,,..,, indel -1 SNP none {uCE2-1895} 1075 CB6871_redo II 10432292 1 A C 52 1.00 63 32 1 3 4 @ccC, point 0 SNP none {uCE2-1896} 1076 CB6871_redo II 10432293 1 C T 56 1.00 63 32 1 3 4 @ttT, point 0 nongenic,nongenic -10344 upstream,-3772 upstream {E04D5.2},{E04D5.3} 1077 CB6871_redo II 10436909 1 A C 255 1.00 63 62 0 29 29 @cCcCccCcCccCCcccCcCccccCccCcc point 0 SNP none {haw28333,snp_E04D5[5]} 1078 CB6871_redo II 10437067 1 G A 255 1.00 63 62 0 27 27 @aaaaAAAaAaaaAAAaaAaaAAaAAAA point 0 SNP none {haw28334} 1079 CB6871_redo II 10458126 1 C T 255 1.00 63 62 0 32 32 @ttTTtTTTttTTTTtttTtTTttTTTTTtTtT point 0 nongenic,nongenic -1374 upstream,959 into {ZK673.11a},{ZK673.13} 1080 CB6871_redo II 10473915 1 A G 255 1.00 63 62 1 42 43 @ggggGgGggg,ggggGgGGgGGgGGgGGGgGggggggGGgggg point 0 SNP none {haw28363} 1082 CB6871_redo II 10599667 1 A T 34 1.00 63 62 2 5 7 @TTTTT., point 0 nongenic,nongenic,nongenic,nongenic -1671 upstream,408 into,415 into,854 downstream {C14A4.8},{C14A4.9.2},{C14A4.9.1},{C14A4.15} 1083 CB6871_redo II 10714152 1 C T 255 1.00 63 62 0 31 31 @TTTtTTTtTTttTTtTTtTTTtTTTTTTtTt point 0 missense GAA->AAA[Glu->Lys] {C09G5.2} 1084 CB6871_redo II 10718249 1 C T 255 1.00 63 62 0 44 44 @ttTtTtTttTTTtTtTTttTtTTTttTTTTtTTtttttTtttTT point 0 nongenic,nongenic -3318 upstream,731 into {C09G5.8b},{C09G5.8a} 1085 CB6871_redo II 10779219 1 G T 255 1.00 63 62 0 26 26 @tttTtttttttttTttttTttttttt point 0 nongenic,nongenic,nongenic,nongenic -4234 upstream,-6153 upstream,355 into,898 into {C52A11.4d},{R06F6.1.1},{T19E10.1a},{T19E10.1b} 1086 CB6871_redo II 10779220 1 G A 255 1.00 63 62 0 27 27 @aaaAaaaaaaaaaAaaaaAaaaaaaaa point 0 nongenic,nongenic,nongenic,nongenic -4235 upstream,-6152 upstream,356 into,899 into {C52A11.4d},{R06F6.1.1},{T19E10.1a},{T19E10.1b} 1087 CB6871_redo II 10827063 1 C T 255 1.00 63 62 0 39 39 @TTttTttTttTTTTtTtTtTTTTTTTTTTTTTTtTTTTT point 0 SNP none {haw28664,snp_VM106R[1]} 1088 CB6871_redo II 10828430 1 C T 255 1.00 63 62 0 27 27 @TTtTtTttTTttTTTtTTTtTTTTttT point 0 SNP none {haw28666} 1089 CB6871_redo II 10828577 1 G A 255 1.00 63 62 0 19 19 @aaaAAaAAaAaAaAaaAaA point 0 SNP none {haw28667} 1090 CB6871_redo II 10829219 1 G A 255 1.00 63 62 0 26 26 @aAaaAaaAAaAaaaaaAaaaaAaaaa point 0 SNP none {haw28668} 1091 CB6871_redo II 10835733 1 C T 255 1.00 63 62 0 34 34 @tTtttTttttTttTtttttTTtTTttTTTtTtat point 0 nongenic,nongenic -5952 upstream,5614 into {VM106R.1},{M106.1} 1092 CB6871_redo II 11068362 1 C T 255 1.00 63 62 0 23 23 @TtttTtTTtTTttTTtTtTTttt point 0 nongenic,nongenic,nongenic,nongenic,nongenic -13134 upstream,-24310 upstream,10107 into,10338 into,1240 into {F45E10.2b},{C09H10.1},{F45E10.1b,F45E10.1c,F45E10.1d},{F45E10.1a},{F45E10.1e} 1093 CB6871_redo II 11092046 1 T C 255 1.00 63 62 0 25 25 @ccCcCCCcCcCcccCcccccccccC point 0 nongenic,nongenic -2665 upstream,-626 upstream {F45E10.1a,F45E10.1b,F45E10.1c,F45E10.1d},{C09H10.1} 1098 CB6871_redo II 11181038 1 T G 132 1.00 63 62 0 5 5 @ggGGg point 0 SNP none {snp_F37H8[3]} 1100 CB6871_redo II 11196929 1 A G 34 1.00 63 62 3 6 9 @,.,GGGgNg point 0 SNP none {snp_F37H8[5]} 161456 CB6871_redo II 11291094 220 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered codon 506 to codon 580 (11 % of 645 codons) {C47G2.4} 1110 CB6871_redo II 11318254 1 A C 65 1.00 63 62 3 6 9 @cCccCc.,, point 0 nongenic,nongenic -4071 upstream,903 downstream {T24F1.4},{T24F1.5} 1113 CB6871_redo II 11551007 1 T A 29 1.00 63 4 1 5 6 @AAAaa, point 0 nongenic 990 into {F54D5.12.1} 1114 CB6871_redo II 11551008 1 G T 25 1.00 63 4 1 4 5 @TTtt, point 0 nongenic 989 into {F54D5.12.1} 1115 CB6871_redo II 11564862 1 G T 6 1.00 63 62 3 5 8 @,.,ttttt point 0 nongenic,nongenic,nongenic,nongenic,nongenic -4862 upstream,-742 upstream,-794 upstream,396 into,504 into {F54D5.4.1},{F54D5.15a,F54D5.15b.1},{F54D5.15c},{F54D5.5a},{F54D5.5b} 1116 CB6871_redo II 11611944 1 T A 5 1.00 63 62 2 3 5 @,.Aaa point 0 nongenic,nongenic -55 upstream,497 downstream {F07A11.5},{F07A11.4} 1118 CB6871_redo II 11680663 1 C T 255 1.00 63 62 0 31 31 @TtTTtttTTtTTTtTtttTtttTTtttTTTT point 0 missense GCA->ACA[Ala->Thr] {C47D12.3} 4962 CB6871_redo II 11717737 1 X X -1000 -999.99 -1000 -1000 3 -1 2 @,,. indel -1 SNP none {uCE2-2035} 1119 CB6871_redo II 11725220 1 T A 255 1.00 63 62 0 31 31 @aaAaAAAaaAAaaaaaAaAaaaAaaAaaAaA point 0 nongenic -20 upstream {F13D12.2} 1121 CB6871_redo II 11794523 1 A C 255 1.00 63 62 0 12 12 @ccCccccCcccC point 0 nongenic,nongenic -4429 upstream,2641 into {F43G6.11a,F43G6.11b},{F43G6.4} 1125 CB6871_redo II 11842153 1 C T 255 1.00 63 62 0 22 22 @TTtttTTTTTttTttttTTTTt point 0 nongenic,nongenic,nongenic -379 upstream,-469 upstream,-9661 upstream {T27D12.1.1},{T27D12.1.2},{T27D12.3} 1126 CB6871_redo II 11909409 1 C T 255 1.00 63 62 0 26 26 @ttTttTtTTtTTTttttTtTTTTTTt point 0 missense ATG->ATA[Met->Ile] {ZK930.1} 1135 CB6871_redo II 11960791 1 A C 12 1.00 63 0 0 4 4 @cccc point 0 nongenic,nongenic,nongenic 133 downstream,136 downstream,292 downstream {W03C9.6.1},{W03C9.1},{W03C9.6.2,W03C9.6.3} 1136 CB6871_redo II 12043162 1 C T 255 1.00 63 62 0 29 29 @tttTtTTTtttTtTtttttTTTTttTTtT point 0 nongenic,nongenic,nongenic -4105 upstream,-6335 upstream,338 into {Y17G7B.7.1},{Y17G7B.10a.2,Y17G7B.10a.6},{Y17G7B.13} 1137 CB6871_redo II 12115353 1 C T 255 1.00 63 62 0 28 28 @tTttTttTtTTTtttttTtTtTTTtTtT point 0 SNP none {haw30080} 1138 CB6871_redo II 12170815 1 G A 255 1.00 63 62 0 35 35 @aaaAAaaaAaAaAAAAAaAAaAaAaaAaAaaAAAA point 0 SNP none {haw30197} 1140 CB6871_redo II 12171258 1 C T 15 1.88 63 8 25 26 51 @.,.TT...T..,T..TT,tT,.,,,,t,Tt.,TtT,ttTTTTt,TtT..TT point 0 SNP none {haw30199} 1142 CB6871_redo II 12174493 1 G A 255 1.00 63 62 0 23 23 @AAaAAAaAAAaAaAaAAaAAaAA point 0 SNP none {haw30201} 1143 CB6871_redo II 12178809 1 C T 255 1.00 63 62 0 19 19 @tTtttTtttTTTttTTttt point 0 SNP none {haw30206} 1144 CB6871_redo II 12189092 1 T A 255 1.00 63 62 0 21 21 @AaaaaaAaaAAAAaAaaAAaa point 0 three_prime_UTR none {Y57A10A.14} 1145 CB6871_redo II 12193173 1 G A 255 1.00 63 62 0 39 39 @AaAAaaAAaaaaAAaAaaaAAaaaAAaAAAaAaAAAAAA point 0 nongenic 3382 into {Y57A10A.15} 1146 CB6871_redo II 12220070 1 T C 255 1.00 63 62 0 21 21 @CCcCCCCccCcCccccccCCc point 0 nongenic,nongenic,nongenic -5202 upstream,1479 into,1634 into {Y57A10A.19},{Y57A10A.18b},{Y57A10A.18a} 1147 CB6871_redo II 12230085 1 A T 4 1.00 63 16 2 3 5 @.,ttt point 0 nongenic 1852 into {Y57A10A.20} 1148 CB6871_redo II 12230087 1 T G 17 1.00 63 4 2 3 5 @.,ggg point 0 nongenic 1854 into {Y57A10A.20} 1149 CB6871_redo II 12260333 1 C T 118 1.25 63 62 0 4 4 @tttT point 0 SNP none {haw30396} 1150 CB6871_redo II 12266285 1 G T 64 1.00 63 62 3 5 8 @,..tTTtt point 0 SNP none {haw30403} 1152 CB6871_redo II 12370055 1 C A 255 1.00 63 62 0 27 27 @aAaaAaaaaAaAaAaaaAAaAAaAAaA point 0 SNP none {haw30684} 1153 CB6871_redo II 12387897 1 T A 255 1.00 63 62 0 36 36 @AAAaaAAAaaAaAaAAAAaaaaaaaAaaaaAaAAaA point 0 SNP none {haw30711} 1154 CB6871_redo II 12397969 1 G A 255 1.00 63 62 0 24 24 @AAaaaaaaAaAAaaaAaaAaaAaA point 0 nongenic -297 upstream {F57G9.7} 1159 CB6871_redo II 12533265 1 C T 255 1.00 63 62 0 31 31 @TgtttTttTtTtTTtttttTtttTtTTTtTT point 0 nongenic,nongenic -2409 upstream,372 downstream {F49C5.4},{F49C5.2} 1163 CB6871_redo II 12556600 1 A G 8 1.00 63 48 3 6 9 @.,.gGGggg point 0 missense GAG->GGG[Glu->Gly] {F49C5.11} 1165 CB6871_redo II 12595553 1 C T 255 1.00 63 62 0 17 17 @TttTtTTtttTTtTTTT point 0 SNP none {haw31224} 1171 CB6871_redo II 12650528 1 T A 30 6.69 16 30 0 6 6 @AaaAAa point 0 nongenic -4135 upstream {Y38E10A.20} 1173 CB6871_redo II 12658929 1 C T 255 1.00 63 62 0 39 39 @TTTtTTttTTtTttttTTtttttttTTtTtTttTTTTtt point 0 SNP none {haw31398} 1174 CB6871_redo II 12659508 1 A G 255 1.00 63 62 0 26 26 @GGGGGGGgGGGgGGGgGgggGGGgGg point 0 nongenic,nongenic -9241 upstream,4241 into {Y38E10A.21},{Y38E10A.20} 1175 CB6871_redo II 12670938 1 A G 255 1.00 63 62 0 24 24 @gggggGGGGGGGGGGgGggGGGGg point 0 SNP none {haw31411} 1176 CB6871_redo II 12677412 1 T G 255 1.00 63 62 0 26 26 @GGgGGgGGGGGGggGGGgGGgggggg point 0 missense AAC->ACC[Asn->Thr] {Y38E10A.23} 1177 CB6871_redo II 12683679 1 A T 255 1.00 63 62 0 23 23 @TtTTTtTTtTtTTttTTTTTtTt point 0 nongenic,nongenic -10640 upstream,2944 into {Y46G5A.1a,Y46G5A.1b},{Y46G5A.2} 1178 CB6871_redo II 12684543 1 G A 255 1.00 63 62 0 27 27 @AAAaAaAaAAAAAaAaAAAAaaAAaaA point 0 SNP none {haw31456} 1179 CB6871_redo II 12684928 1 G A 245 1.00 63 62 0 10 10 @aaaAAAAAAA point 0 SNP none {haw31457} 1180 CB6871_redo II 12687365 1 T C 9 1.00 63 46 1 8 9 @,cccccccc point 0 nongenic,nongenic -6954 upstream,742 downstream {Y46G5A.1a,Y46G5A.1b},{Y46G5A.2} 1181 CB6871_redo II 12717330 1 T G 118 1.00 63 62 0 4 4 @gggg point 0 nongenic,nongenic,nongenic 1717 into,8041 into,8062 into {Y46G5A.1c},{Y46G5A.1b},{Y46G5A.1a} 1182 CB6871_redo II 12749851 1 T C 90 8.44 63 62 499 -244 255 @,,....,,,cC,,,,C,..,,,c....,,,CC,....,,CC,C..,,C........CC,,Cc..ccC,,C....,C,,,c.c.C,CCCC,C,C,c.ccc point 0 nongenic -11610 upstream {Y46G5A.5} 1183 CB6871_redo II 12760686 1 T A 255 1.00 63 62 0 26 26 @aaaaaaaAaaaAaAAAAAaaAAAAaa point 0 nongenic -18 upstream {Y46G5A.10} 1184 CB6871_redo II 12764190 1 G C 255 1.00 63 62 0 34 34 @CCCccccccCcCCCCcccCCCcccCcCCccCcCc point 0 SNP none {haw31561} 4970 CB6871_redo II 12764265 0 X X -1000 -999.99 -1000 -1000 1 1 2 @,TTT indel 0 nongenic -2862 downstream {Y46G5A.10} 1187 CB6871_redo II 12771932 1 A T 255 1.00 63 62 1 18 19 @tttttTTtttttTttTtt. point 0 nongenic,nongenic,nongenic -2993 upstream,-3800 upstream,1200 into {Y46G5A.14},{Y46G5A.12.1},{Y46G5A.13} 1188 CB6871_redo II 12783785 1 C T 255 1.00 63 62 0 29 29 @TTTTttTTttTtTTTTttTTTttTTTTtt point 0 missense ATG->ATA[Met->Ile] {Y46G5A.15} 1189 CB6871_redo II 12784485 1 T C 255 1.00 63 62 0 29 29 @CcCccCcCcccCCCCcCCcCcCCCCcCCc point 0 SNP none {haw31598} 1191 CB6871_redo II 12800302 1 G C 27 1.00 63 24 2 5 7 @CcccC., point 0 nongenic,nongenic -3934 upstream,241 downstream {Y46G5A.17.1},{Y46G5A.18a} 1192 CB6871_redo II 12800303 1 C G 24 1.00 63 26 2 3 5 @ggG., point 0 nongenic,nongenic -3935 upstream,240 downstream {Y46G5A.17.1},{Y46G5A.18a} 1193 CB6871_redo II 12803492 1 C A 21 1.12 63 62 9 9 18 @.......AA.AA.AAAAA point 0 nongenic,nongenic,nongenic -1279 upstream,-7124 upstream,1680 into {Y46G5A.19a.2},{Y46G5A.17.1},{Y46G5A.18a,Y46G5A.18b} 1194 CB6871_redo II 12803501 1 G A 46 1.19 63 62 6 10 16 @....AA.AA.AAAAAA point 0 nongenic,nongenic,nongenic -1270 upstream,-7133 upstream,1671 into {Y46G5A.19a.2},{Y46G5A.17.1},{Y46G5A.18a,Y46G5A.18b} 1199 CB6871_redo II 12829152 1 C G 13 1.00 63 8 1 3 4 @ggG. point 0 nongenic,nongenic -1463 upstream,-279 upstream {Y46G5A.24},{Y46G5A.23} 1200 CB6871_redo II 12829153 1 A C 13 1.00 63 8 0 4 4 @ccCg point 0 nongenic,nongenic -1462 upstream,-280 upstream {Y46G5A.24},{Y46G5A.23} 1201 CB6871_redo II 12829859 1 C A 255 1.12 63 62 0 20 20 @AAAAAAAAAAAAAAaAAAaA point 0 nongenic,nongenic -756 upstream,-986 upstream {Y46G5A.24},{Y46G5A.23} 4976 CB6871_redo II 13023501 1 X X -1000 -999.99 -1000 -1000 6 -3 3 @...,.. indel -1 SNP none {uCE2-2163} 1206 CB6871_redo II 13062610 1 T A 255 1.00 63 62 0 29 29 @AAAaaaaaAAaaaAaAAaAaaAAaAaaAa point 0 SNP none {haw31867} 1207 CB6871_redo II 13063714 1 A G 97 1.00 63 62 1 8 9 @gGgGGggg, point 0 SNP none {snp_F42G4[4]} 1208 CB6871_redo II 13090005 1 T A 255 1.00 63 62 0 22 22 @aaaaAAAaaAAAAAaaAAAAAA point 0 missense GAT->GAA[Asp->Glu] {Y81G3A.3} 1209 CB6871_redo II 13092153 1 G C 255 3.50 63 62 0 26 26 @CCccCCcCcccCCccCcccccccccC point 0 SNP none {snp_Y81G3A[1]} 1210 CB6871_redo II 13092162 1 G T 255 2.12 63 62 0 27 27 @tTTtTtttTTttTtttttttttTTtTT point 0 SNP none {snp_Y81G3A[2]} 1211 CB6871_redo II 13092217 1 G A 255 1.00 63 62 0 30 30 @AaaAaaaAAaAaaaaAaaaaaaaaAAaAaa point 0 SNP none {haw31901,snp_Y81G3A[3]} 1212 CB6871_redo II 13097749 1 C G 172 1.62 63 62 0 20 20 @gGGAGGTGGGGGGGGGGGGG point 0 nongenic,nongenic,nongenic -1202 upstream,407 downstream,435 into {Y81G3A.5b},{F29C12.3},{Y81G3A.5a} 1213 CB6871_redo II 13239531 1 G C 255 1.00 63 62 0 34 34 @CcCcccCCCccCCCcccCCCCcCcCCcCccCccC point 0 missense GAC->GAG[Asp->Glu] {F15D4.4} 1216 CB6871_redo II 13350116 1 C A 255 1.00 63 62 0 48 48 @aAaaaAAAaAAaaAAaAAAaaAaaAaAAAAaaAAAaAaaaAAAAaAAA point 0 SNP none {haw32310} 1217 CB6871_redo II 13369533 1 C T 255 1.00 63 62 0 31 31 @TTTttttTtTtTtTTtTTtttTtTtttTTTT point 0 missense CCG->TCG[Pro->Ser] {Y48C3A.20} 1218 CB6871_redo II 13378340 1 G A 255 1.00 63 62 0 16 16 @AAAaAAAAAAaAAAaa point 0 SNP none {haw32413} 1220 CB6871_redo II 13408374 1 C A 255 1.06 63 62 0 18 18 @aAaAaAAAaaaaAAAaAA point 0 nongenic,nongenic,nongenic,nongenic -4178 upstream,1162 into,2021 into,2307 into {Y48C3A.18a},{Y48C3A.17b},{Y48C3A.17c},{Y48C3A.17a,Y48C3A.17d} 1221 CB6871_redo II 13434751 1 G T 193 1.06 63 62 0 11 11 @ttttttttttt point 0 nongenic,nongenic 937 into,948 into {Y48E1C.4a},{Y48E1C.4b} 1222 CB6871_redo II 13434786 1 G T 187 1.12 63 62 0 9 9 @ttttttttt point 0 nongenic,nongenic 972 into,983 into {Y48E1C.4a},{Y48E1C.4b} 1223 CB6871_redo II 13440583 1 G T 255 1.00 63 62 0 28 28 @TttTtTttTttTtTTTtttTtTtTttTT point 0 missense,SNP ACG->AAG[Thr->Lys],none {Y48E1C.3},{haw32539} 1224 CB6871_redo II 13452555 1 A G 255 1.00 63 62 0 23 23 @GggGGGgggGggGGggggggGGg point 0 nongenic,nongenic -5051 upstream,3796 into {E01G4.1},{E01G4.4} 1225 CB6871_redo II 13468178 1 C T 255 1.00 63 62 0 34 34 @ttttTTttttttttTtTtttTTTTtttTttTtTT point 0 nongenic,nongenic -4160 upstream,-6199 upstream {E01G4.5},{E01G4.3a.1,E01G4.3a.2} 1226 CB6871_redo II 13482425 1 C T 255 1.00 63 62 0 31 31 @TtTtttTTtTTTTttTtTtTTTtttTTtttt point 0 nongenic 113 into {E01G4.6} 1227 CB6871_redo II 13485389 1 T C 255 1.00 63 62 0 29 29 @cGCCCCCCcccCCccccCCCcCccCCccC point 0 silent TGT->TGC[Cys->Cys] {E01G4.6} 1228 CB6871_redo II 13528270 1 A G 255 1.00 63 62 0 30 30 @gGGggGGGgGgGggGgGgGGGgGGGGGggG point 0 nongenic,nongenic,nongenic 2857 into,2859 into,689 into {Y48E1B.14a.2},{Y48E1B.14a.1},{Y48E1B.14b} 1229 CB6871_redo II 13578367 1 A G 219 1.00 63 62 1 12 13 @ggGGGgGGGgGG. point 0 nongenic,nongenic,nongenic -3397 upstream,-7267 upstream,2535 into {Y48E1B.5},{Y48E1B.8},{Y48E1B.7} 1230 CB6871_redo II 13579405 1 T A 255 1.19 63 62 0 19 19 @AAAAAAAAAAaAAaAaAAA point 0 nongenic,nongenic,nongenic -4435 upstream,-6229 upstream,3573 into {Y48E1B.5},{Y48E1B.8},{Y48E1B.7} 1231 CB6871_redo II 13579440 1 T A 237 1.44 63 62 0 11 11 @AaaAaAaaaaa point 0 nongenic,nongenic,nongenic -4470 upstream,-6194 upstream,3608 into {Y48E1B.5},{Y48E1B.8},{Y48E1B.7} 1232 CB6871_redo II 13587530 1 G A 255 1.00 63 62 0 30 30 @AaaaaAaaAaAAAAaaaaaAAAAaaAAAaA point 0 missense GAG->AAG[Glu->Lys] {Y48E1B.8} 1233 CB6871_redo II 13589381 1 C T 255 1.00 63 62 0 33 33 @tTTTTTTTTtTtttttTTtTttTtttTttTTtt point 0 missense ATG->ATA[Met->Ile] {Y48E1B.16} 1235 CB6871_redo II 13697891 1 G C 8 1.00 63 0 0 4 4 @CcAC point 0 SNP none {snp_Y54G9A[1]} 1241 CB6871_redo II 13722005 1 C A 255 1.00 63 62 0 21 21 @aaaaaaaaAAAaAaAAAaAAA point 0 SNP none {haw33062} 1242 CB6871_redo II 13738653 1 T A 61 1.00 63 62 1 3 4 @.AAA point 0 nongenic -3007 upstream {R06B9.6} 1243 CB6871_redo II 13801366 1 C A 255 1.00 63 62 0 23 23 @AAaAAaAAaAaaaAaaaAAaaaa point 0 SNP none {haw33213} 1244 CB6871_redo II 13859679 1 C T 255 1.00 63 62 0 26 26 @TTtTttTTttTTttTTttttTTTTtT point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -974 upstream,1204 into,1238 into,1268 into,256 into,286 into,307 into {Y51H1A.1c.5},{Y51H1A.1b},{Y51H1A.1c.1},{Y51H1A.1c.4},{Y51H1A.1a},{Y51H1A.1c.3},{Y51H1A.1c.2} 1245 CB6871_redo II 13883905 1 A G 48 1.00 63 62 1 4 5 @.GtGg point 0 nongenic,nongenic,nongenic -4657 upstream,1295 into,1296 into {Y51H1A.6a},{Y51H1A.5.2},{Y51H1A.5.1} 1246 CB6871_redo II 13883906 1 G T 77 1.00 63 48 1 4 5 @.TtTt point 0 nongenic,nongenic,nongenic -4656 upstream,1296 into,1297 into {Y51H1A.6a},{Y51H1A.5.2},{Y51H1A.5.1} 1247 CB6871_redo II 13902248 1 G A 255 1.00 63 62 0 45 45 @AAaAAaaAaAAaaAAaAaaAaAAaaAaAAAAaaAaaAaaaaAAaa point 0 nongenic,nongenic -241 upstream,-6580 upstream {W02B8.1},{W02B8.2} 1248 CB6871_redo II 13905900 1 G A 67 1.00 63 30 2 4 6 @.,AaAa point 0 nongenic,nongenic -2928 upstream,-3893 upstream {W02B8.2},{W02B8.1} 1249 CB6871_redo II 13905901 1 A G 65 1.00 63 30 2 5 7 @.,GgGgg point 0 nongenic,nongenic -2927 upstream,-3894 upstream {W02B8.2},{W02B8.1} 1250 CB6871_redo II 13909080 1 A G 255 1.00 63 62 0 29 29 @GGGGGGGGgGGGGgGgGggGggGggggGg point 0 nongenic,nongenic,nongenic -7073 upstream,-7178 upstream,252 into {W02B8.1},{W02B8.3},{W02B8.2} 1253 CB6871_redo II 13977728 1 C T 255 1.25 63 62 0 25 25 @TTtTtttTtttTttttTTtttTttT point 0 nongenic,nongenic,nongenic -1602 upstream,-3527 upstream,661 into {Y39G8B.2},{Y39G8B.9},{Y39G8B.3} 1254 CB6871_redo II 13985375 1 G T 41 8.81 44 20 0 28 28 @TtTTTTTTTTTttTTTTttTttTTTTTT point 0 nongenic -819 upstream {Y39G8B.4} 1262 CB6871_redo II 14171676 1 C T 255 1.00 63 62 0 45 45 @tttTTttTtttTTTTtTttttttttTTTTttttttTTTttttttT point 0 SNP none {haw33776} 1263 CB6871_redo II 14199109 1 C T 255 1.00 63 62 0 35 35 @TttTttTttTTtTttTTtttttTtTttttTttTTT point 0 missense GCT->GTT[Ala->Val] {Y48B6A.7} 1265 CB6871_redo II 14211019 1 C G 255 1.00 63 62 0 26 26 @ggGgTgGGGggggggGGggGggGGGg point 0 SNP none {haw33827} 1266 CB6871_redo II 14260657 1 A C 171 2.25 60 62 0 19 19 @CCCCCCCCCCCCCcCCCCc point 0 nongenic,nongenic -15895 upstream,4405 into {Y54G11A.3},{Y54G11A.1} 1267 CB6871_redo II 14261823 1 G C 107 1.00 63 62 0 5 5 @cccCa point 0 SNP none {haw33932} 1268 CB6871_redo II 14266134 1 G A 255 1.00 63 62 0 38 38 @aaAAaaaaAAAaaaAAaaAAAaaaaaAAaaAAaAAaaA point 0 nongenic,nongenic -10418 upstream,2922 into {Y54G11A.3},{Y54G11A.1} 1273 CB6871_redo II 14276713 1 T C 255 1.00 63 62 0 32 32 @CcCccCCCCcCCCCCccccCCCCCcCCccCCC point 0 silent,SNP TTG->CTG[Leu->Leu],none {Y54G11A.3},{haw33969} 1274 CB6871_redo II 14279456 1 C A 240 6.94 63 62 0 25 25 @AaaaaaAaaaaaaaaaaAaaaaaaa point 0 nongenic,nongenic -10400 upstream,2904 into {Y54G11A.1},{Y54G11A.3} 1275 CB6871_redo II 14311576 1 T C 255 1.00 63 62 0 37 37 @cCCcccCCccCcCcCCcCCCcccccccCCcCCcCccC point 0 nongenic,nongenic -6483 upstream,-894 upstream {Y54G11A.14},{Y54G11A.13} 1276 CB6871_redo II 14319190 1 C T 231 1.06 63 62 0 12 12 @ttTtTttTtTtt point 0 silent CTG->TTG[Leu->Leu] {Y54G11A.14} 1288 CB6871_redo II 14362662 1 C T 255 1.00 63 62 0 30 30 @tttttTTtTTtttTTTttttTTTttTtttt point 0 silent TTC->TTT[Phe->Phe] {R06A4.2.1,R06A4.2.2} 1289 CB6871_redo II 14406898 1 T C 255 1.00 63 62 1 35 36 @CCcccccCCCcCcCcCCCcCCCCccCCCCCCCc.CC point 0 silent,SNP TTT->TTC[Phe->Phe],none {F26H11.2c,F26H11.2d.1,F26H11.2d.2,F26H11.2e,F26H11.2f,F26H11.2g},{snp_F26H11[1]} 1290 CB6871_redo II 14464254 1 T G 20 1.00 63 2 4 6 10 @.,,,GGggGg point 0 nongenic 561 into {Y54G11B.1} 1291 CB6871_redo II 14483827 1 G A 255 1.00 63 62 0 32 32 @aaAaaAAAAAAaaaAaaAaAaaAAaaaAaaaA point 0 nongenic -4297 upstream {C13B4.1a,C13B4.1b.1,C13B4.1b.2} 1293 CB6871_redo II 14738880 1 T C 110 1.00 63 38 1 5 6 @,CccCC point 0 nongenic,nongenic -10927 upstream,266 into {C09F9.3a,C09F9.3b,C09F9.3c},{Y54E2A.1} 1295 CB6871_redo II 14762616 1 T G 3 5.25 0 0 3 5 8 @C,ggg..g point 0 nongenic,nongenic -4902 upstream,8046 into {Y54E2A.5},{Y54E2A.4} 1296 CB6871_redo II 14774781 1 C T 255 1.00 63 62 0 25 25 @tTtTtTTtTtTTTTtTtTTTttTtt point 0 nongenic,nongenic,nongenic -1889 upstream,-3486 upstream,3259 into {Y54E2A.7},{Y54E2A.8},{Y54E2A.4} 1297 CB6871_redo II 14796259 1 G T 255 1.00 63 62 0 34 34 @TttTTTtTTTtTtTttTTTttTTTTtTTtTTTtt point 0 missense,missense,SNP GGG->GTG[Gly->Val],TGG->TGT[Trp->Cys],none {Y54E2A.11b.1,Y54E2A.11b.2},{Y54E2A.11a.1,Y54E2A.11a.2},{uCE2-2369} 1299 CB6871_redo II 14872831 1 C A 255 1.00 63 62 0 26 26 @aAAaaAaaaaAAaAaaaaaAaaAaAA point 0 nongenic 2986 into {R05H10.3a,R05H10.3b} 1300 CB6871_redo II 14918232 1 G A 255 1.00 63 62 0 33 33 @aAaAAAAAaAAAaaaAAAAAaaaAaAaAAAAaa point 0 nongenic,nongenic -6092 upstream,-7928 upstream {E01F3.1b},{R03C1.1a,R03C1.1b} 1305 CB6871_redo II 15043614 1 C T 217 1.50 63 62 0 19 19 @TTTttTTTtTtTTttTTtT point 0 ncRNA none {Y53F4B.45} 1306 CB6871_redo II 15043625 1 C G 171 1.38 63 62 0 15 15 @gGGggGGgGggggGG point 0 ncRNA none {Y53F4B.45} 1307 CB6871_redo II 15073258 1 T A 156 7.81 63 62 0 18 18 @AaAAaAAaaAaaaAAaAa point 0 nongenic,nongenic -1689 upstream,-3916 upstream {Y53F4B.18},{Y53F4B.19} 1316 CB6871_redo II 15165109 1 C T 255 1.00 63 62 0 39 39 @TtttTttTtTTttTTTTttttTttTtTtTtTtTttTTtt point 0 silent GGG->GGA[Gly->Gly] {Y53F4B.30} 1317 CB6871_redo II 15178419 1 C T 255 1.00 63 62 0 34 34 @TTTTTttTtTttTTTtTTTTtTtTttTTtTtttt point 0 silent CAG->CAA[Gln->Gln] {Y53F4B.37} 1318 CB6871_redo II 15233232 1 C T 255 1.00 63 62 2 27 29 @TTTTtTtTttTtTtTTttttTtTtTt.t. point 0 missense GCC->GTC[Ala->Val] {Y46E12BL.2} 1319 CB6871_redo II 15240031 1 G A 255 1.00 63 62 0 36 36 @aaAAAAaaaAaAaAAAAaaAaAAAaAaaAAAaAAat point 0 missense GTT->ATT[Val->Ile] {Y46E12BL.2} 1320 CB6871_redo II 15241193 1 T C 25 1.81 63 62 10 10 20 @.....CCc,cC.c,Ccc.c. point 0 nongenic 3641 into {Y46E12BL.2} 1321 CB6871_redo II 15270565 1 C T 255 1.00 63 62 0 18 18 @TTTTTTtTtTTgttttTt point 0 nongenic,nongenic,nongenic -19164 upstream,-3727 upstream,2452 into {Y46E12BL.1},{2RSSE.2},{2RSSE.1} 1322 CB6871_redo III 15852 1 G T 255 1.00 63 62 0 30 30 @TTtTttTTtTtTTttTTtttttTtTTtttT point 0 nongenic,nongenic -1050 upstream,-327 upstream {H10E21.3a},{H10E21.1} 1323 CB6871_redo III 79346 1 G T 3 9.44 0 0 4 5 9 @TTTTT.,,. point 0 nongenic,nongenic -9529 upstream,7038 into {F54C4.2},{F54C4.3} 1328 CB6871_redo III 118298 1 T G 255 1.00 63 62 0 29 29 @ggGgGGGGgggGgGGGgGggGGgGggggG point 0 silent GTT->GTG[Val->Val] {C29F9.5} 161461 CB6871_redo III 133070 49 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 646 to 695 bp into {C29F9.1} 1332 CB6871_redo III 230735 1 C G 24 1.00 63 16 3 5 8 @GGGG..g. point 0 nongenic,nongenic -5105 upstream,302 into {Y50D7A.4.1},{Y50D7A.5} 1333 CB6871_redo III 230736 1 G C 16 1.00 63 24 4 4 8 @CCCC.... point 0 nongenic,nongenic -5104 upstream,303 into {Y50D7A.4.1},{Y50D7A.5} 1334 CB6871_redo III 277155 1 G A 253 1.00 63 62 1 16 17 @aaAAaaAAAAAAaa.aa point 0 nongenic,nongenic -6960 upstream,5727 into {Y50D7A.9},{Y50D7A.2} 1349 CB6871_redo III 513510 1 T G 93 1.00 63 62 0 4 4 @Gggg point 0 nongenic,nongenic -1336 upstream,246 downstream {F30H5.3},{T22F7.5} 1352 CB6871_redo III 628754 1 G C 3 1.25 63 0 1 3 4 @CC,c point 0 nongenic,nongenic -942 upstream,583 into {T19C3.5},{T19C3.6} 1356 CB6871_redo III 661018 1 A G 68 1.00 63 34 2 6 8 @GGGggG.. point 0 silent AGA->AGG[Arg->Arg] {C09F5.1} 1358 CB6871_redo III 665295 1 A G 42 1.00 63 0 1 3 4 @.ggG point 0 nongenic 966 into {C09F5.3} 1359 CB6871_redo III 665394 1 T G 48 1.00 63 62 3 3 6 @,,,Ggg point 0 nongenic 867 into {C09F5.3} 1360 CB6871_redo III 666837 1 C G 6 1.00 63 18 3 3 6 @,,,ggg point 0 nongenic -576 upstream {C09F5.3} 1361 CB6871_redo III 666838 1 G C 18 1.00 63 6 2 3 5 @,,ccc point 0 nongenic -577 upstream {C09F5.3} 1363 CB6871_redo III 691185 1 C T 255 1.00 63 62 0 32 32 @TTTTTTTTtttTttttttTTTtTttttTTtTT point 0 silent,SNP GAG->GAA[Glu->Glu],none {W02B3.7},{haw37341} 1366 CB6871_redo III 752175 1 G T 255 1.00 63 62 0 32 32 @TTtTtTttTtttTTTttTttTTttTTTTtTtT point 0 nongenic,nongenic -5489 upstream,246 into {T17H7.4a.1,T17H7.4a.2,T17H7.4b.1,T17H7.4b.2,T17H7.4c.1,T17H7.4c.2,T17H7.4g.2},{T17H7.4a.3,T17H7.4b.3,T17H7.4c.3,T17H7.4j} 1374 CB6871_redo III 792813 1 T G 20 1.00 63 28 2 3 5 @.,cGG point 0 nongenic,nongenic -1478 upstream,869 into {B0412.4.1},{F42G9.7} 1375 CB6871_redo III 792814 1 G C 28 1.00 63 20 1 4 5 @.TcCC point 0 nongenic,nongenic -1477 upstream,868 into {B0412.4.1},{F42G9.7} 1376 CB6871_redo III 800355 1 A T 255 1.00 63 62 1 26 27 @,TTtttTttTtTTtttTTtTTtTTtTT point 0 nongenic,nongenic,nongenic -11465 upstream,5223 into,5226 into {B0412.2},{B0412.3.2},{B0412.3.1} 1377 CB6871_redo III 835904 1 G C 12 1.00 63 62 2 3 5 @.,CcC point 0 missense CCG->GCG[Pro->Ala] {K02F3.8} 1379 CB6871_redo III 844170 1 C G 35 1.00 63 52 2 4 6 @,.GGgG point 0 nongenic,nongenic -1667 upstream,377 downstream {K02F3.2},{K02F3.3} 1380 CB6871_redo III 844171 1 G C 52 1.00 63 34 1 4 5 @.CCcC point 0 nongenic,nongenic -1666 upstream,378 downstream {K02F3.2},{K02F3.3} 4997 CB6871_redo III 871577 0 X X -1000 -999.99 -1000 -1000 2 0 2 @..ggg indel 0 nongenic,nongenic -1728 upstream,193 downstream {T24C4.2},{T24C4.3} 1382 CB6871_redo III 931533 1 T C 68 4.44 63 62 81 174 255 @CCCCCCCC..C..c.C,CCCcCCCCC.CC..c.C.C,..,,C,C,Cc.CCcccccCcccc.CC.cccCCccccCCCcccccccccC.cccCCccc.ccc point 0 nongenic -5231 upstream {F23H11.8a,F23H11.8b.1,F23H11.8b.2,F23H11.8b.3} 1387 CB6871_redo III 932357 1 C G 10 1.00 63 6 2 2 4 @g.g, point 0 nongenic -6055 upstream {F23H11.8a,F23H11.8b.1,F23H11.8b.2,F23H11.8b.3} 1389 CB6871_redo III 979256 1 A G 3 1.12 63 0 0 16 16 @GGGTGGGGGGGGGggg point 0 nongenic,nongenic,nongenic,nongenic -3991 upstream,-7243 upstream,1183 into,1884 into {R06B10.4a,R06B10.5.2},{R06B10.1},{R06B10.2},{R06B10.5.1} 1390 CB6871_redo III 979259 1 C G 3 1.12 63 0 5 9 14 @G,G,GGGGGG,..g point 0 nongenic,nongenic,nongenic,nongenic -3988 upstream,-7246 upstream,1180 into,1887 into {R06B10.4a,R06B10.5.2},{R06B10.1},{R06B10.2},{R06B10.5.1} 1392 CB6871_redo III 1028767 1 T A 5 1.00 63 60 1 5 6 @.Aaaaa point 0 nongenic,nongenic -364 upstream,22 downstream {Y34F4.5},{E_BE45912.2} 1393 CB6871_redo III 1028769 1 C T 163 1.00 63 4 0 6 6 @TttttT point 0 nongenic,nongenic -366 upstream,20 downstream {Y34F4.5},{E_BE45912.2} 1394 CB6871_redo III 1096621 1 G A 255 1.00 63 62 0 23 23 @AaaAaaaAAaAAaaAAAaaaaAA point 0 nongenic -6590 upstream {F58B6.2} 1395 CB6871_redo III 1102253 1 G T 255 1.00 63 62 0 35 35 @TTTTTtTttTTtTtttTTTTTtTTtTTTTttTTtt point 0 nongenic -958 upstream {F58B6.2} 1398 CB6871_redo III 1120425 1 C G 3 3.62 63 0 1 4 5 @.gggg point 0 nongenic,nongenic,nongenic -4062 upstream,3913 into,3975 into {F58B6.1},{Y71D11A.3b},{Y71D11A.3a} 1399 CB6871_redo III 1153121 1 T G 41 1.00 63 20 0 4 4 @GGGg point 0 nongenic 1090 into {Y71D11A.1} 1400 CB6871_redo III 1153123 1 G A 26 1.00 63 20 1 3 4 @AAA. point 0 nongenic 1092 into {Y71D11A.1} 1401 CB6871_redo III 1153124 1 A G 39 1.00 63 26 0 4 4 @GGGg point 0 nongenic 1093 into {Y71D11A.1} 1402 CB6871_redo III 1169970 1 C G 255 1.00 63 62 0 45 45 @GggGgGGGGGggGGGGGgggggGgGGgggggGggggGgGgGgGgg point 0 silent GTC->GTG[Val->Val] {Y71D11A.1} 1432 CB6871_redo III 1318411 1 C G 255 1.12 63 62 0 17 17 @gggggGgggGGGgggGg point 0 SNP none {haw38527} 1433 CB6871_redo III 1323866 1 G A 255 1.00 63 62 0 21 21 @aaaAAaAaAAaaaaaaaaaaA point 0 nongenic,nongenic -178 upstream,-4767 upstream {Y82E9BL.10},{Y82E9BL.18} 161462 CB6871_redo III 1327007 11612 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered 1627 bp upstream to 4951 bp downstream (100 % of 500 codons) {Y82E9BL.18} 1434 CB6871_redo III 1362606 1 C T 255 1.00 63 62 0 34 34 @TTtTTttTTtTttTTTtTttTTtTttTttttTTt point 0 silent AAC->AAT[Asn->Asn] {Y82E9BR.7} 1445 CB6871_redo III 1475181 1 A T 255 1.00 63 62 0 19 19 @tTTtttTttttTTttttTT point 0 nongenic 7319 into {Y82E9BR.18} 1447 CB6871_redo III 1502262 1 G C 255 1.62 63 62 0 25 25 @ccCCccCCCCcCccCCcCcCcCCcC point 0 nongenic,nongenic -6244 upstream,4257 into {M01G5.6},{M01G5.1} 1449 CB6871_redo III 1579536 1 T A 255 6.00 63 62 12 34 46 @Aa,aaaa,,a.,aA,,,A,aaAa,A,aAa,aaaaaAaaaaaaaaaa point 0 nongenic 1249 into {Y22D7AL.7} 1450 CB6871_redo III 1579537 1 A T 255 6.00 63 62 13 33 46 @Tt,tttt,,t.,tT,,,T,ttTt,T,tTt,tctttT.ttttttttt point 0 nongenic 1248 into {Y22D7AL.7} 1451 CB6871_redo III 1587878 1 C T 255 1.00 63 62 0 31 31 @TTttTTtTtttTTtTtttTtTtttTTtTtTt point 0 missense AGA->AAA[Arg->Lys] {Y22D7AL.8} 1452 CB6871_redo III 1629052 1 C T 255 1.00 63 62 0 14 14 @ttTttttTTTtTtt point 0 SNP none {haw39277} 1453 CB6871_redo III 1636696 1 G A 255 1.00 63 62 0 14 14 @aaaAaAAaaAAAAA point 0 SNP none {haw39295} 1454 CB6871_redo III 1636742 1 C A 255 1.00 63 62 0 15 15 @AAAAAAAaAaAaAAA point 0 SNP none {haw39297} 1455 CB6871_redo III 1636775 1 G A 229 1.00 63 62 0 11 11 @AaAAAaaaAAa point 0 SNP none {haw39298} 1456 CB6871_redo III 1636782 1 G T 255 1.00 63 62 0 12 12 @tTTTtttTTttt point 0 SNP none {haw39299} 1458 CB6871_redo III 1781302 1 C A 37 1.00 63 42 2 7 9 @AA,G,aAaa point 0 nongenic -7833 upstream {Y39A3CL.2} 1462 CB6871_redo III 1863224 1 G T 222 1.00 63 62 0 18 18 @tttttttttttttttttt point 0 SNP none {haw39736} 1464 CB6871_redo III 1881118 1 C T 175 8.81 63 62 2 11 13 @,TTTTTT,TTTTT point 0 nongenic,nongenic 289 downstream,319 downstream {Y39A3CR.1a},{Y39A3CR.1b} 1465 CB6871_redo III 1919739 1 C T 255 1.00 63 62 0 37 37 @TTtTttTTtTtttTTTTttTtTTtTTttTtTTtTTTt point 0 nongenic -7926 upstream {F53A3.6} 1466 CB6871_redo III 1958885 1 C T 255 1.00 63 62 0 46 46 @tTTtttTTTTTTtttTtTtttTtTTttTttTttTtttTTTttTTtt point 0 nongenic,nongenic,nongenic -1034 upstream,3049 into,3050 into {R155.1b.2},{R155.1a.2,R155.1b.1,R155.1b.3},{R155.1a.1} 1467 CB6871_redo III 1962248 1 C T 255 1.00 63 62 0 29 29 @TTTTTTttTTtTttTTTtTTtTtTtTtTT point 0 nongenic,nongenic -313 upstream,-314 upstream {R155.1a.1},{R155.1a.2,R155.1b.1,R155.1b.3} 1468 CB6871_redo III 2109910 1 C T 255 1.00 63 62 0 29 29 @tTTttttTTttTTTTtTtTttttttttTt point 0 nongenic -1890 upstream {Y48G9A.7} 1469 CB6871_redo III 2282476 1 G T 28 1.38 63 62 19 20 39 @TttTTTTtTTttTtTTT,...,,..,t,TT,,.....,. point 0 nongenic,nongenic -8964 upstream,5211 into {Y54F10BM.15},{Y54F10BM.3} 1470 CB6871_redo III 2290986 1 T A 255 1.00 63 62 0 28 28 @AaaAAaaaaaaAaAAAaaAAaAAAAaAA point 0 nongenic -454 upstream {Y54F10BM.15} 1471 CB6871_redo III 2326012 1 C T 55 1.06 63 62 5 9 14 @ttttttttt,,,,, point 0 nongenic,nongenic,nongenic -15056 upstream,877 into,895 downstream {Y54F10BM.11},{Y54F10BM.2},{Y54F10BM.12} 1481 CB6871_redo III 2365479 1 T C 164 1.00 63 62 0 10 10 @CCCCCCCCCC point 0 SNP none {haw40568} 1482 CB6871_redo III 2365480 1 A G 165 2.38 63 62 0 11 11 @GGGGGGGGGGG point 0 nongenic 787 into {H04J21.2} 5000 CB6871_redo III 2379343 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @,,,,cg,c indel 2 nongenic,nongenic,nongenic -3155 downstream,-3160 downstream,-6699 upstream {H14E04.2b},{H14E04.2a,H14E04.2c,H14E04.2d},{H04J21.1} 1483 CB6871_redo III 2379540 1 A C 255 1.00 63 62 0 39 39 @CCCCCCccCCccCCCcCCcCCcCCCCccccccccccCcc point 0 SNP none {haw40600} 1485 CB6871_redo III 2405323 1 C T 255 1.00 63 62 0 23 23 @tTTttTTTTTTTTtTTTTTTTTt point 0 SNP none {haw40696} 1498 CB6871_redo III 2565617 1 G A 255 1.12 63 62 0 30 30 @AaaAaaAaaaaaaaaaaAAaAaAaAAaaAa point 0 nongenic,nongenic -1638 upstream,556 into {Y54F10AM.11},{Y54F10AM.1} 5003 CB6871_redo III 2653087 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @,...tt indel 0 nongenic -4986 upstream {H19M22.2a,H19M22.2b,H19M22.2d} 1507 CB6871_redo III 2728181 1 A T 243 1.00 63 62 0 11 11 @TTtTttTTttT point 0 SNP none {haw41299} 1508 CB6871_redo III 2728812 1 G T 255 1.25 63 62 0 13 13 @tTTtTttTttttt point 0 nongenic,nongenic -3729 upstream,2712 into {Y71H2AM.11},{Y71H2AM.7} 1511 CB6871_redo III 2809673 1 A G 255 1.00 63 62 0 11 11 @gggGGGGGGGG point 0 nongenic 1320 into {Y71H2AM.3} 1512 CB6871_redo III 2822658 1 G C 128 8.00 63 62 0 6 6 @CCCCCc point 0 nongenic,nongenic,nongenic -4401 upstream,-7696 upstream,2000 into {Y71H2AM.1.1,Y71H2AM.1.2},{Y71H2AM.23.1},{Y71H2AM.2} 1513 CB6871_redo III 2824963 1 T A 255 1.00 63 62 0 15 15 @aaaaaAAAAaaaAAA point 0 nongenic,nongenic -2096 upstream,305 downstream {Y71H2AM.1.1,Y71H2AM.1.2},{Y71H2AM.2} 1519 CB6871_redo III 2921823 1 C T 106 1.00 63 62 0 9 9 @GtGtttTtt point 0 nongenic,nongenic,nongenic -21430 upstream,10864 into,335 into {T20B6.3},{R10F2.1},{R10F2.4} 1520 CB6871_redo III 2962984 1 A C 144 3.56 63 62 2 15 17 @.cCccccccccccc.cC point 0 nongenic,nongenic 379 into,825 into {H05C05.2a},{H05C05.2b} 1521 CB6871_redo III 2980599 1 A T 255 1.00 63 62 0 34 34 @ttTtTTTTtttttTtttTTTTTttTTTTTTTTTt point 0 SNP none {haw41691} 1522 CB6871_redo III 3162633 1 A G 255 1.00 63 62 0 24 24 @GGgGGGGgGgggGGGggGGGGgGg point 0 nongenic -3640 upstream {R148.5a,R148.5b} 1523 CB6871_redo III 3162638 1 A G 255 1.00 63 62 0 22 22 @GGGGgGgggGGGggGGGGgGgG point 0 nongenic -3635 upstream {R148.5a,R148.5b} 1525 CB6871_redo III 3230685 1 T C 56 1.44 63 50 0 7 7 @cccCcCc point 0 nongenic,nongenic -2405 upstream,43 downstream {Y53G8AL.1},{H09G03.1} 1526 CB6871_redo III 3252687 1 G T 255 1.00 63 62 0 27 27 @TTTttTTtTttTTtttTTTTTtTtTtT point 0 nongenic,nongenic -2701 upstream,446 into {Y53G8AL.4},{Y53G8AL.3} 1527 CB6871_redo III 3254400 1 G C 237 1.06 63 62 0 12 12 @CCcCcCcCCCCC point 0 nongenic,nongenic -1267 upstream,386 into {Y53G8AL.3},{Y53G8AM.4} 1528 CB6871_redo III 3255111 1 C A 255 1.00 63 62 0 14 14 @AAaaAAaaAAaAaa point 0 SNP none {haw42163} 1529 CB6871_redo III 3255125 1 C T 255 1.00 63 62 0 15 15 @TtTttTttTtTtTTT point 0 SNP none {haw42164} 1530 CB6871_redo III 3255131 1 G T 255 1.00 63 62 0 16 16 @TttTtTtTTTtTTTTt point 0 nongenic,nongenic -1998 upstream,478 into {Y53G8AL.3},{Y53G8AM.4} 1531 CB6871_redo III 3255728 1 C T 255 1.00 63 62 0 18 18 @TTtttTtTtTtTTTTtTT point 0 nongenic,nongenic -119 upstream,990 downstream {Y53G8AM.4},{Y53G8AM.5} 1532 CB6871_redo III 3271710 1 A G 255 1.00 63 62 1 16 17 @GG,gGgggGggcggGgG point 0 SNP none {haw42190} 1533 CB6871_redo III 3271738 1 T A 255 1.00 63 62 0 17 17 @aAaaaaaAaAaAAAaaa point 0 SNP none {haw42191} 1534 CB6871_redo III 3281311 1 T C 91 1.00 63 62 2 5 7 @cCCcC,, point 0 nongenic,nongenic -2623 upstream,-985 upstream {Y53G8AM.8.1,Y53G8AM.8.2},{Y53G8AR.7a} 1536 CB6871_redo III 3339895 1 C G 60 1.00 63 10 0 4 4 @gGGg point 0 nongenic -4969 upstream {F45H7.2a,F45H7.2b} 1537 CB6871_redo III 3346934 1 T A 74 1.00 63 62 2 6 8 @,,Aaaaaa point 0 nongenic,nongenic -14186 upstream,2070 into {F45H7.2c},{F45H7.2a,F45H7.2b} 1538 CB6871_redo III 3346935 1 A G 111 1.00 63 62 1 9 10 @,GgggggGGG point 0 nongenic,nongenic -14185 upstream,2071 into {F45H7.2c},{F45H7.2a,F45H7.2b} 1539 CB6871_redo III 3347670 1 A G 82 1.00 63 62 1 3 4 @gGG. point 0 nongenic,nongenic -13450 upstream,2806 into {F45H7.2c},{F45H7.2a,F45H7.2b} 1540 CB6871_redo III 3347671 1 G A 72 1.00 63 58 1 3 4 @aAA. point 0 nongenic,nongenic -13449 upstream,2807 into {F45H7.2c},{F45H7.2a,F45H7.2b} 1544 CB6871_redo III 3366747 1 T G 42 1.00 63 62 3 3 6 @,,,ggG point 0 five_prime_UTR none {F45H7.4.1,F45H7.4.2} 1545 CB6871_redo III 3373714 1 G A 255 1.00 63 62 0 24 24 @aaaAaaAAaaAAAAaAAaaAaaaA point 0 SNP none {haw42340} 1546 CB6871_redo III 3377952 1 C G 46 1.00 63 62 3 5 8 @.,,ggGGg point 0 nongenic,nongenic -7753 upstream,556 into {F45H7.4.1},{F45H7.6} 5006 CB6871_redo III 3378279 0 X X -1000 -999.99 -1000 -1000 3 0 3 @.,,gg indel 4 nongenic,nongenic -8080 upstream,-882 downstream {F45H7.4.1},{F45H7.6} 1549 CB6871_redo III 3378283 1 A G 8 1.00 63 0 0 4 4 @CggG point 0 nongenic,nongenic -8084 upstream,887 into {F45H7.4.1},{F45H7.6} 1558 CB6871_redo III 3385599 1 T C 9 4.88 26 12 1 9 10 @CCCCCCCCC, point 0 nongenic,nongenic -15400 upstream,2224 into {F45H7.4.1},{F45H7.6} 1570 CB6871_redo III 3386554 1 T A 3 7.62 0 2 0 5 5 @CAAAA point 0 nongenic,nongenic,nongenic -16355 upstream,1269 into,341 downstream {F45H7.4.1},{F45H7.6},{C56G7.2} 1571 CB6871_redo III 3387032 1 T C 78 2.25 63 4 0 8 8 @CCCCccgc point 0 missense AAC->AGC[Asn->Ser] {C56G7.2} 1572 CB6871_redo III 3390532 1 C G 18 1.00 63 62 1 3 4 @Ggg, point 0 nongenic,nongenic -574 upstream,625 into {C56G7.2},{C56G7.3} 1574 CB6871_redo III 3429127 1 A C 166 6.06 63 62 0 14 14 @cccccccccccccg point 0 nongenic 721 into {K01A11.1} 1578 CB6871_redo III 3436722 1 G T 28 1.00 63 60 1 3 4 @.ttt point 0 nongenic -5383 upstream {K01A11.1} 1585 CB6871_redo III 3463329 1 C G 255 1.00 63 62 0 31 31 @gGgggggGGgggGgGgGGGGgGggGGgGGgg point 0 SNP none {haw42422} 1589 CB6871_redo III 3467137 1 T C 255 1.00 63 62 0 27 27 @CCCCCCCcCCCcCCCcCCCcCCCccCC point 0 SNP,three_prime_UTR none,none {haw42435},{C34C12.3} 1590 CB6871_redo III 3467466 1 C T 255 1.00 63 62 0 29 29 @tTttTTTtTTtTTTttttTtttTTtTTTt point 0 SNP,three_prime_UTR none,none {haw42438},{C34C12.3} 1592 CB6871_redo III 3468663 1 A C 255 1.00 63 62 0 20 20 @ccccccCCcCccCcCcCCCC point 0 nongenic,nongenic,nongenic -3324 upstream,1013 into,972 into {C34C12.5.1,C34C12.5.2},{C34C12.4.1},{C34C12.4.2} 1593 CB6871_redo III 3517342 1 C T 3 9.94 0 26 4 8 12 @Tt,TTtTTT... point 0 nongenic,nongenic -595 upstream,2250 into {M01F1.5.2},{M01F1.5.1} 1595 CB6871_redo III 3540491 1 C A 55 1.00 63 62 4 7 11 @,a..,AAAAaA point 0 SNP none {haw42478} 1596 CB6871_redo III 3594905 1 T C 52 1.00 63 28 3 3 6 @cCc.,. point 0 nongenic,nongenic,nongenic -13227 upstream,-299 upstream,4188 into {C48D5.3},{C48D5.2c},{C48D5.2a} 1597 CB6871_redo III 3599952 1 G T 12 1.00 63 62 3 5 8 @,,,tTTta point 0 nongenic,nongenic,nongenic,nongenic -18274 upstream,4748 into,834 into,9235 into {C48D5.3},{C48D5.2c},{C48D5.2b},{C48D5.2a} 1598 CB6871_redo III 3599953 1 T C 62 1.00 63 12 3 5 8 @,,,cCCcc point 0 nongenic,nongenic,nongenic,nongenic -18275 upstream,4749 into,835 into,9236 into {C48D5.3},{C48D5.2c},{C48D5.2b},{C48D5.2a} 1599 CB6871_redo III 3606223 1 A T 255 1.00 63 62 0 16 16 @TTtTTTtTTtTttTtT point 0 nongenic,nongenic,nongenic -24545 upstream,5324 into,5753 into {C48D5.3},{C48D5.2b,C48D5.2c},{C48D5.2a} 1600 CB6871_redo III 3611202 1 C A 252 1.00 63 62 0 14 14 @aaaaaaaaaaaaAa point 0 SNP none {haw42583} 1601 CB6871_redo III 3613833 1 G T 255 1.00 63 62 0 28 28 @tTtttTTttttttTttttttttTTtTtt point 0 SNP none {haw42588} 1603 CB6871_redo III 3616756 1 C T 255 1.00 63 62 0 24 24 @tttttTTtTtttTTTTTtTTtTtT point 0 SNP none {haw42597} 1604 CB6871_redo III 3625872 1 T A 255 1.00 63 62 0 34 34 @aAAaAaaaAaAAaaaaaaaaaAAAaAAaAAAAAA point 0 SNP none {haw42613} 1606 CB6871_redo III 3641475 1 G T 255 1.00 63 62 0 31 31 @ttTTTtTttttTTTttTttttTTTtttTttt point 0 SNP none {haw42649} 1607 CB6871_redo III 3641888 1 G A 255 1.00 63 62 0 36 36 @AaAAaAaaAAaaaAAaaAAaAAaAaaAAAaaaaaAa point 0 SNP none {haw42650} 1608 CB6871_redo III 3645769 1 C A 255 1.00 63 62 1 25 26 @A,AAaaaaaaaaaAaAaaaaAaaAAa point 0 nongenic,nongenic 1404 into,1416 into {C46F11.1b},{C46F11.1a} 1609 CB6871_redo III 3645821 1 T G 255 1.00 63 62 0 23 23 @GGGgGGGGggGGgGGGggggGgg point 0 nongenic,nongenic 1456 into,1468 into {C46F11.1b},{C46F11.1a} 1612 CB6871_redo III 3716562 1 G C 6 1.00 63 50 1 5 6 @.cCCCc point 0 nongenic 2165 into {C14B1.6} 1613 CB6871_redo III 3805251 1 C G 7 1.00 63 62 3 4 7 @.,,GGgg point 0 nongenic,nongenic -904 upstream,501 into {T24A11.2},{T24A11.3} 1614 CB6871_redo III 3862170 1 C T 255 1.00 63 62 0 22 22 @ttTttTTTTTtTttttttTttt point 0 nongenic,nongenic,nongenic -1844 upstream,-3763 upstream,768 into {C36A4.9a.3},{C36A4.8b},{C36A4.8a} 5018 CB6871_redo III 3990963 0 X X -1000 -999.99 -1000 -1000 2 0 2 @..ccCc indel 1 nongenic -1190 downstream {C36E8.2} 1622 CB6871_redo III 3990964 1 C A 43 1.00 63 14 0 7 7 @ttaaAaA point 0 nongenic 1189 into {C36E8.2} 1623 CB6871_redo III 3995385 1 G A 197 1.00 63 62 0 7 7 @AaAaaaa point 0 SNP none {haw42814} 1625 CB6871_redo III 3995594 1 C G 6 1.00 63 4 1 3 4 @GGG. point 0 nongenic -3441 upstream {C36E8.2} 1635 CB6871_redo III 4112942 1 G C 255 1.00 63 62 0 21 21 @CcccCccCcccCcccccccCC point 0 SNP none {haw42904} 1636 CB6871_redo III 4136469 1 C T 255 1.00 63 62 0 35 35 @TtTtTttTTtTtttTTTTTtTttTtttTttTTTtt point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -2214 upstream,-38368 upstream,10759 into,2268 into,5221 into,7997 into,9904 into {C30D11.1f,C30D11.1g,C30D11.1h},{C03C10.4},{C30D11.1a},{C30D11.1e},{C30D11.1d},{C30D11.1c},{C30D11.1b} 1637 CB6871_redo III 4205353 1 T A 255 1.00 63 62 0 37 37 @aAAAaaAAAAAAAAAAaAAaaaAAAAAaaAaAaAaaA point 0 SNP none {haw42939,pas21998} 1638 CB6871_redo III 4209221 1 C A 255 1.00 63 62 0 12 12 @AAAAaaAAaAAa point 0 nongenic,nongenic -1312 upstream,983 downstream {F43C1.1},{R74.8a} 1639 CB6871_redo III 4209222 1 A C 255 1.00 63 62 0 13 13 @CCCCccCCcCCcc point 0 nongenic,nongenic -1311 upstream,984 downstream {F43C1.1},{R74.8a} 1640 CB6871_redo III 4209243 1 C A 182 1.00 63 62 1 12 13 @aaAaAaAaaA.aA point 0 nongenic -1290 upstream {F43C1.1} 1641 CB6871_redo III 4209244 1 G C 230 1.00 63 62 0 14 14 @ccCcCcCccCccCC point 0 nongenic -1289 upstream {F43C1.1} 1642 CB6871_redo III 4286569 1 C T 255 1.19 63 62 0 31 31 @tTTTTTttTTTtTTTTttTTTtTTTtTttTT point 0 SNP none {haw42951} 1643 CB6871_redo III 4426295 1 C T 255 1.00 63 62 0 37 37 @tttTTTTTttttTTtTTtTtTtTTTtTTTttTttTtT point 0 missense GAT->AAT[Asp->Asn] {C28A5.6} 1645 CB6871_redo III 4440341 1 G A 255 1.00 63 62 0 39 39 @AaAAaaaAaAaAaaaAaaAaAaaAAAaaAAAAaAAAaaa point 0 SNP none {haw42977,snp_C28A5[2]} 1646 CB6871_redo III 4440871 1 T A 255 1.00 63 62 0 35 35 @AaaaaAaAaAaAAAAaaaaAAaAAgaAAAaAAAaa point 0 SNP none {haw42978} 1647 CB6871_redo III 4445016 1 C G 18 1.00 63 0 0 4 4 @GGGG point 0 nongenic 882 downstream {C28A5.3} 1655 CB6871_redo III 4506804 1 G T 255 1.00 63 62 0 41 41 @TttttTtTtTtTtTTttTtTTTTtTTTtTtttTttTtTTTt point 0 nongenic,nongenic,nongenic,nongenic -2023 upstream,-5320 upstream,1277 into,1279 into {F25F2.1b},{C07G2.3b.3},{C07G2.3a,C07G2.3b.5,C07G2.3b.6},{C07G2.3b.1,C07G2.3b.2} 1658 CB6871_redo III 4628544 1 C G 3 1.00 63 14 2 4 6 @Gggg,, point 0 missense GCT->GGT[Ala->Gly] {F10F2.7} 1660 CB6871_redo III 4670551 1 T A 59 1.00 63 0 1 3 4 @.AAA point 0 nongenic,nongenic -1661 upstream,-5227 upstream {T23F11.5},{T23F11.4} 1662 CB6871_redo III 4687673 1 A C 18 1.00 63 4 1 3 4 @cCc. point 0 nongenic,nongenic -1595 upstream,-513 upstream {T04A8.5},{T04A8.4} 5028 CB6871_redo III 4708950 2 X X -1000 -999.99 -1000 -1000 7 -4 3 @,.,,,,. indel -2 SNP none {uCE3-874} 1664 CB6871_redo III 4712952 1 C G 255 1.00 63 62 0 32 32 @gggGGggGggggGggGGggGgGgggggGGggG point 0 missense,SNP TGG->TGC[Trp->Cys],none {T04A8.15},{haw43017,uCE3-875} 1665 CB6871_redo III 4738329 1 G A 255 1.00 63 62 0 24 24 @aAAAaaaAaAAAaAaAAaaaaAAA point 0 silent CGC->CGT[Arg->Arg] {F17C8.4.1,F17C8.4.2,F17C8.4.3} 1666 CB6871_redo III 4750685 1 A T 4 2.19 0 24 7 17 24 @tTTt.tttt.t.TTT,.TtTT.t, point 0 nongenic 435 downstream {VB0393L.2} 1668 CB6871_redo III 4761634 1 G A 255 1.00 63 62 0 37 37 @AAaAaaaAAAAaaAaaaAAAAaAAAaaAaaaAAaaaa point 0 SNP none {haw43024} 1669 CB6871_redo III 4808802 1 C G 33 1.00 63 40 1 3 4 @.ggg point 0 nongenic,nongenic -127 upstream,-129 upstream {C38D4.6a.1,C38D4.6b.1},{C38D4.6a.2,C38D4.6b.2} 1670 CB6871_redo III 4808803 1 G C 40 1.00 63 32 1 4 5 @.cccc point 0 nongenic,nongenic -128 upstream,-130 upstream {C38D4.6a.1,C38D4.6b.1},{C38D4.6a.2,C38D4.6b.2} 1671 CB6871_redo III 4845216 1 A T 255 1.00 63 62 0 31 31 @tTTtTtttttTTTTttTttTtTtTTtttttT point 0 missense,SNP AAT->ATT[Asn->Ile],none {F26A1.2},{haw43039} 1672 CB6871_redo III 4936815 1 C T 255 1.00 63 62 0 29 29 @TtTTTTtTtttTTTTTTtTTTTtttTTTT point 0 missense CCA->CTA[Pro->Leu] {C26E6.6} 5030 CB6871_redo III 4962072 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @,..gg indel 0 nongenic,nongenic,nongenic,nongenic -296 downstream,-3550 upstream,-396 upstream,-930 downstream {C27F2.9},{C27F2.2a},{C27F2.5.2},{C27F2.5.1} 1678 CB6871_redo III 4983226 1 G A 103 1.00 63 62 3 6 9 @.,.aaAAAa point 0 SNP none {haw43061} 1679 CB6871_redo III 4983227 1 A G 112 1.00 63 62 3 9 12 @.,.ggGGGgggg point 0 SNP none {haw43062} 1680 CB6871_redo III 5030205 1 G T 76 1.00 63 62 2 5 7 @,.TTttT point 0 nongenic,nongenic -686 upstream,607 downstream {R144.1},{R144.2a} 1682 CB6871_redo III 5032432 1 C G 49 1.00 63 62 0 6 6 @tgGGgG point 0 nongenic,nongenic -4200 upstream,1541 into {C45G9.6b},{R144.1} 1683 CB6871_redo III 5032433 1 T C 79 1.00 63 28 0 5 5 @cCCcC point 0 nongenic,nongenic -4199 upstream,1542 into {C45G9.6b},{R144.1} 5033 CB6871_redo III 5066884 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @,..gGG indel 0 nongenic,nongenic -1802 downstream,-2145 upstream {C45G9.11},{C45G9.2} 1684 CB6871_redo III 5081847 1 A T 255 1.00 63 62 0 40 40 @tttTtTTTTttttTTTtTtttTtTTTTTttTTtttttttt point 0 SNP none {haw43089,pas48342} 1685 CB6871_redo III 5104532 1 C T 255 1.00 63 62 0 27 27 @TtTTtTTTtTTtTTTTtTttTtttttt point 0 missense TCG->TTG[Ser->Leu] {F54D8.6} 1686 CB6871_redo III 5107907 1 C T 255 1.00 63 62 0 45 45 @tTTTtTTTTttTTttttTTTttTTTttTTTtTTtttttTtttTtT point 0 premature_stop CAG->TAG[Gln->stop] {F54D8.1.1,F54D8.1.2} 1687 CB6871_redo III 5195032 1 C A 255 1.00 63 62 0 40 40 @aaAaAaaaagaaAAAAAAAaaaAAaaaaaaaAAAaaAAAA point 0 missense,SNP ACA->AAA[Thr->Lys],none {K10D2.1a},{haw43117} 1688 CB6871_redo III 5333258 1 T G 19 1.00 63 62 1 3 4 @.gGg point 0 missense TGC->GGC[Cys->Gly] {F52C9.1a} 1689 CB6871_redo III 5333259 1 G C 69 1.00 63 18 0 5 5 @cCcCc point 0 missense TGC->TCC[Cys->Ser] {F52C9.1a} 1697 CB6871_redo III 5424451 1 C T 255 1.00 63 62 0 22 22 @tTtTttTttTTttttTTtttTT point 0 nongenic -4928 upstream {W03A5.7} 1698 CB6871_redo III 5434238 1 G A 255 1.00 63 62 0 37 37 @AAaaaAAAaAaAAaAaaAAAAAAAAAaaAAaAAAaaA point 0 five_prime_UTR none {W03A5.4.1} 1704 CB6871_redo III 5595879 1 T G 132 1.00 63 62 2 7 9 @GgGggGg,, point 0 nongenic,splice_donor 155 into,none {F56D2.7},{F56D2.7} 5040 CB6871_redo III 5695323 1 X X -1000 -999.99 -1000 -1000 9 -6 3 @,,,,..,,. indel -1 SNP none {uCE3-925} 5041 CB6871_redo III 5699103 0 X X -1000 -999.99 -1000 -1000 2 1 3 @,,Aa indel 0 nongenic,nongenic,nongenic -1143 upstream,-584 downstream,-718 downstream {B0336.8},{B0336.4a},{B0336.4b} 1709 CB6871_redo III 5702948 1 C T 255 1.00 63 62 0 27 27 @TttTTTtTTTTtTttTTTttTTtTTtT point 0 missense GAT->AAT[Asp->Asn] {B0336.9a,B0336.9b.1,B0336.9b.2,B0336.9d} 1712 CB6871_redo III 5765139 1 C T 43 1.00 63 62 2 4 6 @..TTTt point 0 nongenic,nongenic -2692 upstream,626 into {B0244.11},{B0244.2} 1715 CB6871_redo III 5814252 1 T C 255 1.00 63 62 0 20 20 @ccccccCcCCcccCccCcCC point 0 SNP none {haw43460} 5042 CB6871_redo III 5814708 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,,tttt indel 2 nongenic -288 upstream {R12B2.7} 1718 CB6871_redo III 5823724 1 C T 255 1.00 63 62 0 24 24 @TTTTTTTtTTttTttTTTtttTTT point 0 nongenic -183 upstream {R12B2.8} 1719 CB6871_redo III 5825535 1 C T 255 1.00 63 62 0 36 36 @TTTTttTtTTtTTTtTTtTTTTTtTTtTTTttTttT point 0 nongenic 1628 into {R12B2.8} 1720 CB6871_redo III 5937104 1 T C 49 1.00 63 62 2 4 6 @,,cCcc point 0 nongenic,nongenic -3087 upstream,-35 upstream {F25B5.4a.2},{EGAP1.1} 1721 CB6871_redo III 5938649 1 G C 3 1.00 63 38 1 6 7 @cccccC. point 0 nongenic,nongenic -1542 upstream,-1580 upstream {F25B5.4a.2},{EGAP1.1} 1722 CB6871_redo III 5953899 1 A G 137 1.00 63 62 0 6 6 @gGggGg point 0 missense TCT->CCT[Ser->Pro] {F25B5.7a,F25B5.7c} 1723 CB6871_redo III 5953900 1 T A 139 1.00 63 62 0 6 6 @aAaaAa point 0 missense AAA->AAT[Lys->Asn] {F25B5.7a,F25B5.7c} 1724 CB6871_redo III 5953904 1 G T 199 1.00 63 62 0 9 9 @TttTtTTtt point 0 missense CCA->CAA[Pro->Gln] {F25B5.7a,F25B5.7c} 1728 CB6871_redo III 5962999 1 C T 255 1.00 63 62 0 20 20 @tTTttTTtTTTtttttTTtt point 0 SNP none {haw43492} 5048 CB6871_redo III 5987893 0 X X -1000 -999.99 -1000 -1000 3 -2 1 @..,CCC indel 0 nongenic -3933 upstream {T04C9.2} 1729 CB6871_redo III 6033358 1 A T 113 1.00 63 8 0 7 7 @TttTTgg point 0 missense TCC->ACC[Ser->Thr] {ZK328.7a} 1730 CB6871_redo III 6033360 1 T G 9 1.00 63 62 4 5 9 @GggGG..,. point 0 missense CAA->CCA[Gln->Pro] {ZK328.7a} 1731 CB6871_redo III 6033560 1 T G 86 1.00 63 62 1 5 6 @,GggGg point 0 nongenic,nongenic,nongenic -3030 upstream,191 downstream,872 into {ZK328.6},{ZK328.7b},{ZK328.7a} 1732 CB6871_redo III 6033561 1 G C 121 1.00 63 62 0 5 5 @CccCc point 0 nongenic,nongenic,nongenic -3031 upstream,190 downstream,873 into {ZK328.6},{ZK328.7b},{ZK328.7a} 1733 CB6871_redo III 6037554 1 T C 31 5.56 63 32 4 5 9 @CCcCC.,.. point 0 nongenic,nongenic,nongenic,nongenic -2725 upstream,-7024 upstream,1826 into,1868 into {F40H6.2},{ZK328.6},{ZK328.7a},{ZK328.7b} 1735 CB6871_redo III 6193202 1 G C 3 1.00 63 34 3 5 8 @cCCC.,t. point 0 nongenic 1078 into {C23G10.6} 1736 CB6871_redo III 6229465 1 C T 255 1.00 63 62 0 30 30 @TtTTtTttTttTttTTTtTTtTtttTTTTt point 0 SNP none {haw43535} 1737 CB6871_redo III 6231877 1 C T 255 1.00 63 62 0 32 32 @TTTttTtTTTtttTtTtTTttttttTTTtttt point 0 SNP none {haw43536} 1738 CB6871_redo III 6249162 1 C T 255 1.00 63 62 0 28 28 @tttTTTTttTtttTtTtttttttTTTtT point 0 silent ACC->ACT[Thr->Thr] {T12A2.2.1,T12A2.2.2,T12A2.2.3} 1743 CB6871_redo III 6300175 1 G A 21 1.00 63 34 2 4 6 @AAAA,. point 0 nongenic,nongenic,nongenic,nongenic,nongenic -9145 upstream,435 into,648 into,890 into,906 downstream {F47D12.1a,F47D12.1b,F47D12.1c,F47D12.1d},{F47D12.9a.1,F47D12.9a.2,F47D12.9b.4},{F47D12.9b.3},{F47D12.9b.1,F47D12.9b.2},{F47D12.3} 1744 CB6871_redo III 6304029 1 T C 40 1.00 63 62 1 3 4 @CCc. point 0 nongenic,nongenic -5291 upstream,-866 upstream {F47D12.1a,F47D12.1b,F47D12.1c,F47D12.1d},{F47D12.9a.1} 1745 CB6871_redo III 6324042 1 C A 71 1.00 63 62 3 7 10 @aaAaaaA,,. point 0 nongenic,nongenic,nongenic -2113 upstream,-7631 upstream,137 into {F47D12.10},{C56G2.4.1},{C56G2.5} 1746 CB6871_redo III 6331622 1 A C 20 1.00 63 62 2 5 7 @CCccc,. point 0 nongenic,nongenic,nongenic -51 upstream,-53 upstream,-7443 upstream {C56G2.4.1},{C56G2.4.3},{C56G2.5} 1747 CB6871_redo III 6337503 1 C T 13 2.00 0 10 0 5 5 @TTTTT point 0 nongenic,nongenic 948 downstream,951 downstream {C56G2.7},{C56G2.6.1,C56G2.6.2} 1748 CB6871_redo III 6362931 1 T C 61 1.00 63 36 2 6 8 @CccCcC., point 0 five_prime_UTR none {C56G2.1b} 1749 CB6871_redo III 6362932 1 C T 37 1.00 63 60 2 4 6 @tTtT., point 0 five_prime_UTR none {C56G2.1b} 1750 CB6871_redo III 6371224 1 A G 255 1.00 63 62 0 41 41 @gGgGggGGGGGGgGGgGGGggGggGgggGGGgGGGgGGggG point 0 missense,SNP GAT->GGT[Asp->Gly],none {C16A3.8},{haw43559} 1751 CB6871_redo III 6384795 1 T G 255 1.00 63 62 0 42 42 @GGggGGGgGgGgGgGGgGggGggggGGggggggGgggGgGGG point 0 missense ATT->AGT[Ile->Ser] {C16A3.3} 1752 CB6871_redo III 6412491 1 C G 112 1.00 63 10 0 5 5 @gGGgG point 0 three_prime_UTR none {C05D11.6} 1753 CB6871_redo III 6412492 1 G C 113 1.00 63 10 0 5 5 @cCCcC point 0 three_prime_UTR none {C05D11.6} 1755 CB6871_redo III 6428922 1 G A 211 1.00 63 62 3 12 15 @aAaAaaaAAaAA... point 0 SNP none {haw43564} 1758 CB6871_redo III 6595349 1 C T 255 1.00 63 62 0 32 32 @TtttTtTTTTtttTtTtttttttTTTtTTtTT point 0 missense AGG->AAG[Arg->Lys] {F20H11.2} 1759 CB6871_redo III 6619216 1 C T 255 1.00 63 62 0 45 45 @TTTTtTTTTTTtTTTtttTTtTtTTTtttttTTTTTTTTtTtTTt point 0 missense,SNP CTC->TTC[Leu->Phe],none {Y40D12A.1a},{haw43601} 1763 CB6871_redo III 6626315 1 G C 40 2.00 28 24 0 5 5 @ccCCc point 0 nongenic,nongenic -1403 upstream,-2629 upstream {C13B9.3},{C13B9.1.1,C13B9.1.2} 1769 CB6871_redo III 6685078 1 G T 42 1.00 63 30 3 6 9 @Tttttt,., point 0 nongenic,nongenic,nongenic -19764 upstream,-5867 upstream,9339 into {M01G4.1},{F37A4.7a.2,F37A4.7c},{F37A4.7d} 1770 CB6871_redo III 6685079 1 T G 30 1.00 63 42 3 4 7 @gggg,., point 0 nongenic,nongenic,nongenic -19765 upstream,-5866 upstream,9340 into {M01G4.1},{F37A4.7a.2,F37A4.7c},{F37A4.7d} 1774 CB6871_redo III 6688095 1 C T 112 1.00 63 48 0 4 4 @TtTT point 0 nongenic,nongenic,nongenic -22781 upstream,-2850 upstream,12356 into {M01G4.1},{F37A4.7a.2,F37A4.7c},{F37A4.7d} 1775 CB6871_redo III 6688096 1 T C 109 1.00 63 62 0 4 4 @CcCC point 0 nongenic,nongenic,nongenic -22782 upstream,-2849 upstream,12357 into {M01G4.1},{F37A4.7a.2,F37A4.7c},{F37A4.7d} 1776 CB6871_redo III 6710989 1 A C 130 1.00 63 62 2 7 9 @ccCCCcc,, point 0 nongenic,nongenic -891 upstream,-994 upstream {F37A4.5},{F37A4.8} 1777 CB6871_redo III 6852000 1 G T 23 1.00 63 32 5 8 13 @,,.,,TTtttTtt point 0 nongenic,nongenic -3008 upstream,813 into {R13F6.5},{R13F6.3} 1778 CB6871_redo III 6852001 1 A G 33 1.00 63 22 5 9 14 @,,.,,GGgggGggg point 0 nongenic,nongenic -3009 upstream,814 into {R13F6.5},{R13F6.3} 1779 CB6871_redo III 6877791 1 C T 255 6.50 63 62 0 34 34 @TttTttTtttTttttTttTtTTTTTtTtTtTtTt point 0 nongenic -4400 upstream {K04C2.7} 1780 CB6871_redo III 6923579 1 G A 255 1.00 63 62 0 13 13 @AAAAaAaAAAAAA point 0 SNP none {haw43734} 1783 CB6871_redo III 6978757 1 T A 255 1.00 63 62 0 38 38 @AaAAaaaAaaaaAaAaAAaAAAaAAAaAAAAAaaAaAa point 0 nongenic,nongenic -1061 upstream,796 downstream {F31E3.1},{F31E3.2b} 1790 CB6871_redo III 6990359 1 T G 72 1.00 63 38 1 4 5 @GGGG. point 0 nongenic,nongenic,nongenic,splice_donor -6056 upstream,180 into,254 into,none {C06E8.3a},{C06E8.3c},{C06E8.3b},{C06E8.3b} 1791 CB6871_redo III 6990361 1 G T 38 1.00 63 62 1 3 4 @TTT. point 0 nongenic,nongenic,nongenic -6054 upstream,182 into,256 into {C06E8.3a},{C06E8.3c},{C06E8.3b} 5064 CB6871_redo III 7013024 0 X X -1000 -999.99 -1000 -1000 6 -1 5 @,.,,,.aaaa indel 0 nongenic,nongenic -3944 downstream,-7726 upstream {F11H8.2},{C06E8.5} 1794 CB6871_redo III 7013479 1 G A 255 1.00 63 62 0 49 49 @aaAaaaaaAaaaAAAaaaaAAAaAAAaAaAaaaaaAAAaaAaAaaAAaA point 0 nongenic,nongenic -8181 upstream,4400 into {C06E8.5},{F11H8.2} 1795 CB6871_redo III 7028423 1 T A 255 1.00 63 62 0 29 29 @aaaaaaaAaAAaaaAAAAaaAAaAaAAAA point 0 missense,SNP ACA->TCA[Thr->Ser],none {F11H8.4a,F11H8.4b},{haw43822} 1796 CB6871_redo III 7028541 1 G A 114 1.00 63 62 0 4 4 @aaAa point 0 nongenic 589 into {F11H8.4a,F11H8.4b} 1799 CB6871_redo III 7028623 1 A T 255 1.00 63 62 0 33 33 @tttTtttTTttTtTTtttttTTTttTTTttTtT point 0 SNP none {haw43823} 1800 CB6871_redo III 7028658 1 C T 255 1.00 63 62 0 36 36 @ttTTTttTtTtTTTttTTTTTTtTTtTTTTTttTtT point 0 missense,SNP GAA->AAA[Glu->Lys],none {F11H8.4a,F11H8.4b},{haw43824} 1801 CB6871_redo III 7033325 1 T G 255 1.00 63 62 0 35 35 @GGgggGgGGGGgGgGGGGGGggGGGgGGGGGgggg point 0 nongenic -4195 upstream {F11H8.4a,F11H8.4b} 1802 CB6871_redo III 7047284 1 A C 18 1.00 63 62 2 3 5 @cCc.. point 0 nongenic,nongenic -1628 upstream,-9223 upstream {R01H2.7},{R01H2.2} 1803 CB6871_redo III 7063382 1 T C 73 1.00 63 56 0 4 4 @cCCC point 0 nongenic,nongenic 257 downstream,787 into {R01H2.1},{R01H2.4} 1804 CB6871_redo III 7063383 1 A T 72 1.00 63 56 0 4 4 @tTTT point 0 nongenic,nongenic 258 downstream,786 into {R01H2.1},{R01H2.4} 1805 CB6871_redo III 7063384 1 G A 56 1.00 63 62 0 4 4 @AAAC point 0 nongenic,nongenic 259 downstream,785 into {R01H2.1},{R01H2.4} 1806 CB6871_redo III 7075890 1 G C 63 1.00 63 18 2 2 4 @,,cC point 0 missense CCG->GCG[Pro->Ala] {ZK418.6} 1807 CB6871_redo III 7118005 1 G A 255 1.00 63 62 0 28 28 @AAaAaAAaaaAaAAaaAAaAAAAaAaAa point 0 SNP none {haw43886} 1808 CB6871_redo III 7214104 1 A C 255 1.00 63 62 0 27 27 @CcCCccCCcCCccCcccCcccCCcCcC point 0 missense AGC->CGC[Ser->Arg] {R151.2a,R151.2b.1,R151.2b.2,R151.2b.3,R151.2b.4,R151.2b.5,R151.2c,R151.2d.1,R151.2d.2} 1809 CB6871_redo III 7235776 1 C G 24 4.38 30 2 1 4 5 @GGGG, point 0 nongenic,nongenic -1645 upstream,-3178 upstream {T20H4.5},{T20H4.3a,T20H4.3b} 1812 CB6871_redo III 7236653 1 G C 21 2.00 63 26 1 3 4 @A,ca point 0 nongenic,nongenic -2301 upstream,-2522 upstream {T20H4.3a,T20H4.3b},{T20H4.5} 1813 CB6871_redo III 7236655 1 A G 28 2.00 63 20 2 2 4 @G,g. point 0 nongenic,nongenic -2299 upstream,-2524 upstream {T20H4.3a,T20H4.3b},{T20H4.5} 1814 CB6871_redo III 7236657 1 C A 28 2.00 63 28 2 2 4 @,,aa point 0 nongenic,nongenic -2297 upstream,-2526 upstream {T20H4.3a,T20H4.3b},{T20H4.5} 1815 CB6871_redo III 7238032 1 G C 27 4.38 63 12 4 6 10 @CcCCcC..,, point 0 nongenic,nongenic -3901 upstream,-922 upstream {T20H4.5},{T20H4.3a,T20H4.3b} 1816 CB6871_redo III 7253849 1 T C 102 1.00 63 62 1 5 6 @CCccc, point 0 nongenic,nongenic -5089 upstream,-6136 upstream {B0361.4},{T21D11.1} 1850 CB6871_redo III 7453148 1 C G 4 8.62 0 16 1 4 5 @ggG.g point 0 nongenic,nongenic -787 upstream,-856 upstream {Y69F12A.2a.1},{Y69F12A.2a.2,Y69F12A.2b} 1851 CB6871_redo III 7453152 1 G T 5 8.00 0 16 1 4 5 @tT.tT point 0 nongenic,nongenic -783 upstream,-852 upstream {Y69F12A.2a.1},{Y69F12A.2a.2,Y69F12A.2b} 1853 CB6871_redo III 7453282 1 T G 32 5.31 63 8 3 4 7 @..GG,gG point 0 nongenic,nongenic -653 upstream,-722 upstream {Y69F12A.2a.1},{Y69F12A.2a.2,Y69F12A.2b} 5075 CB6871_redo III 7494921 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @.,,,Cc indel 0 nongenic,nongenic -5921 upstream,322 downstream {K07D8.1},{C07H6.5.1} 1855 CB6871_redo III 7494922 1 A C 6 1.00 63 50 2 3 5 @CCC,. point 0 nongenic,nongenic -5922 upstream,320 downstream {K07D8.1},{C07H6.5.1} 1856 CB6871_redo III 7528175 1 C T 76 1.00 63 50 1 3 4 @,ttT point 0 SNP none {haw44215} 1857 CB6871_redo III 7587271 1 G T 191 1.00 63 62 1 8 9 @.TttTttTt point 0 nongenic,nongenic,nongenic,nongenic -4369 upstream,2661 into,3011 into,3144 into {R13A5.10},{R13A5.1a.2,R13A5.1b,R13A5.1d},{R13A5.1a.1},{R13A5.1c} 5077 CB6871_redo III 7587556 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @,,..,TT indel 0 nongenic,nongenic,nongenic,nongenic -2945 downstream,-3295 downstream,-3428 downstream,-4654 upstream {R13A5.1a.2,R13A5.1b,R13A5.1d},{R13A5.1a.1},{R13A5.1c},{R13A5.10} 1858 CB6871_redo III 7587557 1 G T 48 1.00 63 62 3 5 8 @TTttT,,, point 0 nongenic,nongenic,nongenic,nongenic -4655 upstream,2947 into,3297 into,3430 into {R13A5.10},{R13A5.1a.2,R13A5.1b,R13A5.1d},{R13A5.1a.1},{R13A5.1c} 1859 CB6871_redo III 7588318 1 A G 255 1.00 63 62 0 36 36 @gggGggGGGGGGggggGgGggggGgggGggggGggg point 0 SNP none {haw44283} 1860 CB6871_redo III 7643354 1 T A 255 1.00 63 62 0 12 12 @aaaAaaaAaaaa point 0 SNP none {haw44321} 1863 CB6871_redo III 7708718 1 G T 200 5.75 63 62 0 12 12 @ttttttttTtTt point 0 nongenic,nongenic -3660 upstream,682 into {C03B8.3},{C03B8.4} 5081 CB6871_redo III 7822734 1 X X -1000 -999.99 -1000 -1000 5 -3 2 @,..,. indel -1 SNP none {uCE3-1041} 1865 CB6871_redo III 7874570 1 C A 34 1.00 63 62 3 4 7 @..,aAAa point 0 nongenic 864 into {C02C2.1} 1866 CB6871_redo III 7882068 1 C T 90 1.00 63 62 1 5 6 @T.ttTt point 0 nongenic,nongenic -3301 upstream,969 into {C02C2.5},{ZK688.9} 1867 CB6871_redo III 7882069 1 G C 88 1.00 63 62 1 6 7 @T.ccCcc point 0 nongenic,nongenic -3302 upstream,970 into {C02C2.5},{ZK688.9} 1868 CB6871_redo III 7924181 1 C T 255 1.00 63 62 0 27 27 @TtTTTTTtttTtTTtTtttTtTtTttt point 0 SNP none {haw44542} 1869 CB6871_redo III 7958663 1 C T 255 1.00 63 62 0 36 36 @TTtttttTttttTTTtttttttttTTtTtTttTTtt point 0 SNP none {haw44573} 1870 CB6871_redo III 8026836 1 G A 255 1.00 63 62 0 49 49 @aaaaaAAAaAAaaaaAAAaaaAaAaAaAaAaaaAaAAAAAAAaaAAAaa point 0 missense ACT->ATT[Thr->Ile] {F44B9.7} 1871 CB6871_redo III 8029612 1 T G 18 1.00 63 62 0 4 4 @Aagg point 0 nongenic,nongenic -34 upstream,219 downstream {F44B9.8},{F44B9.9} 1872 CB6871_redo III 8064604 1 C T 255 1.00 63 62 0 41 41 @TtTTTTTttTtTtTTTTTtTTttTTTtTTtTtttttTtttt point 0 SNP none {haw44619,snp_K12H4[1]} 5084 CB6871_redo III 8068401 0 X X -1000 -999.99 -1000 -1000 5 -1 4 @.,,,,Gg indel 0 inframe none {K12H4.1} 1873 CB6871_redo III 8124694 1 G A 255 1.00 63 62 0 26 26 @AaAaAAaAaAaaaAaAAaaaaaaaaA point 0 SNP none {haw44646} 1875 CB6871_redo III 8130396 1 G A 255 1.00 63 62 0 48 48 @AAaaAaaaaaaaAaaAaAaaaaaAaaAAAaAAaaaAAaaAAAAAAaaa point 0 SNP none {haw44651} 1879 CB6871_redo III 8154517 1 T A 255 1.00 63 62 0 38 38 @aAaaAAaaAaaAaAAaAaAaAAAaaaAaaaaaAaAaaA point 0 SNP none {haw44660} 1885 CB6871_redo III 8194456 1 C G 94 1.00 63 62 0 4 4 @ggGG point 0 nongenic,nongenic,nongenic,nongenic -8553 upstream,377 into,682 into,689 downstream {C30A5.5},{C50C3.9b},{C50C3.9a},{C50C3.1} 1886 CB6871_redo III 8194457 1 A C 99 1.00 63 54 0 4 4 @ccCC point 0 nongenic,nongenic,nongenic,nongenic -8552 upstream,376 into,683 into,690 downstream {C30A5.5},{C50C3.9b},{C50C3.9a},{C50C3.1} 1894 CB6871_redo III 8344888 1 C G 3 4.81 0 0 4 7 11 @.,g,gggg.gt point 0 nongenic,nongenic -633 upstream,728 downstream {ZC262.7},{ZC262.10} 1896 CB6871_redo III 8363515 1 G A 255 1.00 63 62 0 37 37 @AaaaAAAAaAaaAaaaaAAaaAAAaaaaaAaAAaAaa point 0 nongenic,nongenic -492 upstream,1189 into {R05D3.3.2},{R05D3.9} 1897 CB6871_redo III 8414491 1 G A 255 1.00 63 62 0 44 44 @AaAaaAaAaAaAaAAAaaAaAaaaAaaaaAAaaAaaaaaAAaAA point 0 nongenic -1653 upstream {ZK1236.3a} 161466 CB6871_redo III 8441872 85 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered,uncovered non-exonic, 1564 to 1649 bp into,non-exonic, 1567 to 1652 bp into,non-exonic, 1569 to 1654 bp into {ZK1236.7.2},{ZK1236.7.3},{ZK1236.7.1} 1910 CB6871_redo III 8461978 1 C A 255 1.00 63 62 0 27 27 @AAAAAaAAaaaAAAaaAaaAaAaaAAa point 0 SNP none {haw44763} 1911 CB6871_redo III 8466855 1 C T 6 1.00 63 52 3 3 6 @TTt.,. point 0 nongenic -3737 upstream {F42H10.5} 1912 CB6871_redo III 8503007 1 A T 255 1.00 63 62 0 31 31 @TtTttTTTttttttTtTtTTtTtTtttTTTT point 0 SNP none {haw44793} 5093 CB6871_redo III 8512792 2 X X -1000 -999.99 -1000 -1000 7 -4 3 @..,,... indel -2 SNP none {snp_C04D8[5]} 1915 CB6871_redo III 8563843 1 G A 21 1.00 63 18 8 9 17 @.,.,,.,.AaaAAaAaA point 0 SNP none {haw44858} 1916 CB6871_redo III 8563931 1 G A 255 1.00 63 62 0 15 15 @aaaaAaaAAAaaAaA point 0 SNP none {haw44859} 1920 CB6871_redo III 8575624 1 C T 131 1.00 63 62 0 4 4 @ttTt point 0 nongenic -5385 upstream {C06E1.3} 1921 CB6871_redo III 8583354 1 C T 46 1.00 63 38 1 3 4 @Ttt, point 0 three_prime_UTR none {C06E1.3} 1924 CB6871_redo III 8624743 1 G A 255 1.00 63 62 0 27 27 @AAaAaAAAAAaaAAAaaAaAaAAAaaa point 0 nongenic,nongenic -6396 upstream,1165 into {C13G5.2},{C13G5.1} 5094 CB6871_redo III 8650750 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,.,gG indel 0 inframe none {F22B7.2} 1925 CB6871_redo III 8684179 1 T A 255 1.00 63 62 0 27 27 @AAAAAaAaaAaaAAaAAaaaaAaaAaa point 0 SNP none {haw44984} 1926 CB6871_redo III 8684208 1 C T 255 1.00 63 62 0 26 26 @TttTttTttTttttTTttttTttTtT point 0 SNP none {haw44985} 1928 CB6871_redo III 8693438 1 G A 55 1.00 63 36 1 4 5 @.AaAa point 0 nongenic,nongenic,nongenic -105 upstream,57 downstream,587 downstream {B0303.7a},{B0303.4.1},{B0303.4.2} 1931 CB6871_redo III 8693607 1 G C 255 1.00 63 62 0 15 15 @ccccCCccccccCcc point 0 missense TGT->TCT[Cys->Ser] {B0303.7a} 1932 CB6871_redo III 8693611 1 G A 255 1.00 63 62 0 17 17 @aaaaAAaaaaaaAaaAA point 0 silent GGG->GGA[Gly->Gly] {B0303.7a} 161467 CB6871_redo III 8693687 52 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 143 to 195 bp into {B0303.7a} 1933 CB6871_redo III 8693743 1 G T 103 1.00 63 62 0 4 4 @TTTT point 0 nongenic,nongenic,nongenic,nongenic -3135 upstream,200 into,362 downstream,892 downstream {B0303.7b},{B0303.7a},{B0303.4.1},{B0303.4.2} 1934 CB6871_redo III 8693773 1 A T 255 1.00 63 62 0 17 17 @TTTTTTTttTtTTTTTT point 0 SNP none {haw44992} 1935 CB6871_redo III 8701737 1 C T 255 1.00 63 62 0 23 23 @TTtTTttTtttttTTTTTTTTtt point 0 silent,SNP TCC->TCT[Ser->Ser],none {B0303.9},{haw44997} 1936 CB6871_redo III 8704000 1 T A 255 1.00 63 62 0 15 15 @aaAAAaaaAAaaAaa point 0 SNP none {haw44999} 1937 CB6871_redo III 8708614 1 G A 255 1.00 63 62 0 29 29 @aaaaaAaaaaaaaAAaAaaaaaaAaaAaa point 0 missense GCC->GTC[Ala->Val] {B0303.11} 1938 CB6871_redo III 8710964 1 T A 255 1.00 63 62 0 24 24 @aaaaAAaaaAaaaAaaaaaAAAAa point 0 SNP none {haw45004} 1939 CB6871_redo III 8711826 1 C T 255 1.00 63 62 0 26 26 @TTTttTTtttTTTTTTtTtTTTTttt point 0 SNP none {haw45005} 5099 CB6871_redo III 8711855 5 X X -1000 -999.99 -1000 -1000 5 -2 3 @,,...Aaa indel -5 nongenic -1836 upstream {B0303.11} 1940 CB6871_redo III 8712013 1 G A 255 1.06 63 62 0 27 27 @aaAAAaAaAaaaAAaAAaaAAAAAAaa point 0 SNP none {haw45006} 1942 CB6871_redo III 8733582 1 A T 255 1.00 63 62 0 48 48 @tttTTttttTtTttttTttTttTTtttTTTTttttTtTTtTtttttTT point 0 SNP none {haw45014,uCE3-1086} 1943 CB6871_redo III 8733611 1 A T 255 1.00 63 62 0 42 42 @tTTTTttttTtTTtTtttttTTTTttTtTtTtTTTTtTtTtt point 0 SNP none {haw45015,uCE3-1087} 1945 CB6871_redo III 8740761 1 C T 255 1.00 63 62 0 27 27 @TtTTTtTTTtTTTTTTTTTTTTtttTT point 0 SNP none {haw45017} 1946 CB6871_redo III 8742380 1 G A 255 1.00 63 62 0 33 33 @AaAaaaAAAAaAaAaAaaAAAaAAAaAAAAAaa point 0 SNP,three_prime_UTR none,none {haw45020},{ZK370.6} 1947 CB6871_redo III 8744441 1 C T 255 1.00 63 62 0 27 27 @TTTtTTTtTtTTTTTtTTtTTTtTTtt point 0 SNP none {haw45021} 1948 CB6871_redo III 8752722 1 C T 255 1.00 63 62 0 24 24 @TTTttTTTTTttttTTtttttTtt point 0 SNP none {haw45024} 1950 CB6871_redo III 8755804 1 T G 20 1.00 63 2 2 4 6 @.,ggGg point 0 nongenic,nongenic -1146 upstream,1172 into {ZK370.8},{ZK370.2} 1951 CB6871_redo III 8758065 1 T C 255 1.00 63 62 0 36 36 @CCcccCCCCCCCCcccCCCCcccCCCCCcCCcCccC point 0 SNP none {haw45027} 1952 CB6871_redo III 8810252 1 T A 59 0.00 63 58 1 3 4 @aaa. point 0 nongenic,nongenic -1016 upstream,-8555 upstream {F54F2.8.1},{F54F2.1} 1953 CB6871_redo III 8810253 1 T A 59 0.00 63 58 1 3 4 @aaa. point 0 nongenic,nongenic -1017 upstream,-8554 upstream {F54F2.8.1},{F54F2.1} 1959 CB6871_redo III 8829705 1 G A 255 1.00 63 62 0 19 19 @AaaAAAaaAaAaAaAaAAa point 0 nongenic,nongenic -511 upstream,307 into {F44E2.3},{F44E2.10} 1965 CB6871_redo III 8890775 1 G T 71 1.00 63 62 0 5 5 @cTTtt point 0 SNP none {haw45052} 1969 CB6871_redo III 8976442 1 T G 45 1.00 63 4 1 4 5 @GGGg, point 0 silent ACA->ACC[Thr->Thr] {R08D7.6a,R08D7.6b,R08D7.6c} 1970 CB6871_redo III 9025485 1 A T 255 1.00 63 62 0 48 48 @tttTTTTTtTTttTtTTTttTTTttTTTTTTTTttTtTtttTTtTTTt point 0 SNP none {haw45122} 1973 CB6871_redo III 9066055 1 C G 255 1.00 63 62 0 21 21 @ggggGgggggGggggGgGgGg point 0 nongenic 5616 into {R107.8} 1974 CB6871_redo III 9066056 1 G C 255 1.00 63 62 0 21 21 @ccccCcccccCccccCcCcCc point 0 nongenic 5615 into {R107.8} 1975 CB6871_redo III 9074293 1 T C 19 1.00 63 26 2 4 6 @,,CcCc point 0 nongenic,nongenic -2622 upstream,571 downstream {R107.8},{F02A9.7} 1976 CB6871_redo III 9101165 1 G T 46 1.00 54 62 1 7 8 @ttt.tttt point 0 missense CAA->AAA[Gln->Lys] {ZK507.1} 1977 CB6871_redo III 9101166 1 C T 91 1.00 54 46 0 8 8 @tttttttt point 0 non_start ATG->ATA[Met->Ile] {ZK507.1} 1982 CB6871_redo III 9101288 1 T A 25 1.00 63 62 12 17 29 @A,,,,AA,AA,A,AAA,AA,AA,AA,AA, point 0 missense AGT->AGA[Ser->Arg] {ZK507.3} 1983 CB6871_redo III 9101294 1 A G 13 1.00 63 62 15 18 33 @,,,GG,GG,G,GGG,GG,GG,GG,GG,,GG,,, point 0 silent AAA->AAG[Lys->Lys] {ZK507.3} 1984 CB6871_redo III 9109837 1 G A 255 1.00 63 62 0 23 23 @AaaaAAAAAaaAAaAAaaAAAaA point 0 nongenic,nongenic -5154 upstream,-654 upstream {ZK512.1},{ZK507.6} 1985 CB6871_redo III 9200527 1 G A 255 1.00 63 62 0 38 38 @aaAaaaaaaaAaAAaaaaAAAaAAAaAaAaAaAAaaaa point 0 missense CCA->TCA[Pro->Ser] {ZC84.1} 1986 CB6871_redo III 9263153 1 G A 255 1.00 63 62 0 27 27 @aaaAaAAAAAAaaAAAaaaAAAaaaAA point 0 SNP none {haw45230} 1987 CB6871_redo III 9264263 1 G A 255 1.00 63 62 0 31 31 @aAAaAAaaaAaaAAAaAaAAaaaAAaAaaAa point 0 SNP none {haw45233} 1988 CB6871_redo III 9266377 1 G C 10 1.00 63 30 1 3 4 @ccC, point 0 nongenic,nongenic -19577 upstream,2592 into {K01B6.1},{M01A8.2a,M01A8.2b} 1995 CB6871_redo III 9291251 1 G A 46 1.00 63 62 2 4 6 @.,AaAa point 0 nongenic,nongenic -22282 upstream,5282 into {M01A8.2a,M01A8.2b},{K01B6.1} 1996 CB6871_redo III 9298564 1 C T 255 1.00 63 62 0 32 32 @tTTTTttttTtTtTTTtTTttttgTTTttttT point 0 SNP none {haw45256} 1997 CB6871_redo III 9341369 1 T C 255 1.00 63 62 0 32 32 @CCcCccCCcCccCCCccccCcCcCCCCCcCcc point 0 missense,SNP AGA->GGA[Arg->Gly],none {K04H4.1a},{haw45266} 1998 CB6871_redo III 9350628 1 C T 255 1.00 63 62 0 21 21 @TTTttttttTttTttTtTtTt point 0 missense,SNP GGA->GAA[Gly->Glu],none {K04H4.2c.1,K04H4.2c.2},{haw45273} 1999 CB6871_redo III 9350653 1 C T 255 1.00 63 62 0 19 19 @TtTtTtTtTttTTTttttt point 0 missense,SNP GAG->AAG[Glu->Lys],none {K04H4.2c.1,K04H4.2c.2},{haw45274} 2000 CB6871_redo III 9350660 1 C T 255 1.00 63 62 0 22 22 @TtTtTttTTTtttttTTTTTtt point 0 silent,SNP AGG->AGA[Arg->Arg],none {K04H4.2c.1,K04H4.2c.2},{haw45275} 2001 CB6871_redo III 9352561 1 C T 255 1.00 63 62 0 25 25 @tTTtTttttTtttTTtTtTttTtTt point 0 silent,SNP GAG->GAA[Glu->Glu],none {K04H4.2c.1,K04H4.2c.2},{haw45277} 2002 CB6871_redo III 9355598 1 A C 255 1.00 63 62 0 29 29 @CcCcCcCccCCccCCCCCcccCCcCcCcc point 0 nongenic,nongenic,nongenic -216 upstream,-234 upstream,-4570 upstream {K04H4.2a.1,K04H4.2a.2},{K04H4.2a.3,K04H4.2b,K04H4.2c.1,K04H4.2c.2},{K04H4.5} 2003 CB6871_redo III 9355599 1 C G 255 1.00 63 62 0 29 29 @GgGgGgGggGGggGGGGGgggGGgGgGgg point 0 nongenic,nongenic,nongenic -217 upstream,-235 upstream,-4569 upstream {K04H4.2a.1,K04H4.2a.2},{K04H4.2a.3,K04H4.2b,K04H4.2c.1,K04H4.2c.2},{K04H4.5} 2005 CB6871_redo III 9386492 1 G A 255 1.00 63 62 0 28 28 @AAAAAAAaaAAaAaaaAAAAaaAAaAAa point 0 missense GAC->AAC[Asp->Asn] {C38C10.1} 2006 CB6871_redo III 9409056 1 T G 131 1.88 63 62 0 14 14 @GGGGGGgggggGgG point 0 nongenic -2513 upstream {T26G10.1} 2007 CB6871_redo III 9409292 1 C G 255 1.31 63 62 0 24 24 @GGgGgGgggggggGGGggGGGGGg point 0 nongenic -2749 upstream {T26G10.1} 2010 CB6871_redo III 9448445 1 C G 255 1.00 63 62 0 30 30 @gGGGgggGGGGggggGgGgGGggGGgggGg point 0 SNP none {haw45304} 2011 CB6871_redo III 9449797 1 C T 255 1.00 63 62 0 37 37 @TTtttTTtttTTTTtTTtTTTTTTtTTtTtTTTtTTT point 0 SNP none {haw45305} 2012 CB6871_redo III 9450593 1 C A 255 1.00 63 62 0 27 27 @AAAaAaaAAAAaaaAaAAaaAAaAAAa point 0 SNP none {haw45306} 2013 CB6871_redo III 9451505 1 G C 255 1.00 63 62 0 30 30 @cCccccccccCccCcccCcccCCccccccc point 0 SNP,three_prime_UTR none,none {haw45307},{F54C8.7a} 2014 CB6871_redo III 9452439 1 G T 255 1.00 63 62 0 17 17 @TttTtTTTTtTTtTttt point 0 SNP none {haw45308,snp_F54C8[1]} 2016 CB6871_redo III 9479166 1 G A 255 1.00 63 62 0 36 36 @AAaAAAAAAaAAaaaAaAaaaaAAAAAAAaaaaAAa point 0 SNP none {haw45312} 161468 CB6871_redo III 9571113 159 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered non-exonic, 7749 to 7908 bp into,non-exonic, 8502 to 8661 bp into {C48B4.4a,C48B4.4b,C48B4.4c},{C48B4.4d} 2019 CB6871_redo III 9583725 1 A T 255 1.00 63 62 0 28 28 @TtTtTtTTTTTtTTTTTttttTTTtTTt point 0 SNP none {haw45342} 2020 CB6871_redo III 9637545 1 A G 125 1.00 63 50 0 5 5 @GgGgC point 0 nongenic -527 upstream {F58A4.11} 5122 CB6871_redo III 9639394 0 X X -1000 -999.99 -1000 -1000 2 -1 1 @.,Tt indel 1 nongenic -2376 upstream {F58A4.11} 2021 CB6871_redo III 9639395 1 T G 31 1.00 63 20 0 4 4 @GGgg point 0 nongenic -2377 upstream {F58A4.11} 2022 CB6871_redo III 9643534 1 C G 255 1.00 63 62 0 24 24 @GgGgGgggGGgggggGggggGggg point 0 SNP none {uCE3-1110} 2023 CB6871_redo III 9643535 1 G C 255 1.00 63 62 0 24 24 @cCcCcccCCcccccCccccCcccc point 0 SNP none {uCE3-1111} 2026 CB6871_redo III 9728786 1 A G 104 1.00 63 62 1 4 5 @,GGgg point 0 nongenic -1345 upstream {C07A9.12} 2027 CB6871_redo III 9754430 1 C A 255 1.00 63 62 0 28 28 @AaAaaaAAaaAaaAaaaAaAaAaAaAAa point 0 missense,SNP GAG->GAT[Glu->Asp],none {T05G5.8.1,T05G5.8.2},{haw45405} 2033 CB6871_redo III 9796154 1 T C 255 1.00 63 62 0 34 34 @ccCCcccCcCccCcccccCcCCcccCCcCcCccc point 0 SNP none {haw45434} 2034 CB6871_redo III 9797056 1 G A 255 1.00 63 62 0 25 25 @aAAaAaaaaaaaAAAaaAAaAaaaA point 0 missense GAC->AAC[Asp->Asn] {ZK632.1a,ZK632.1b} 2035 CB6871_redo III 9870315 1 T G 58 1.00 63 62 2 5 7 @,.GGGGG point 0 nongenic,nongenic -2630 upstream,692 into {ZK757.4a,ZK757.4c},{ZK757.1} 2036 CB6871_redo III 9870316 1 G C 95 1.00 63 58 1 6 7 @.CCCCCC point 0 nongenic,nongenic -2631 upstream,691 into {ZK757.4a,ZK757.4c},{ZK757.1} 2037 CB6871_redo III 9913766 1 C A 255 1.12 63 62 0 42 42 @AaaaaaAAAaaaAaaAAAAAaaaaAaaaaAAaaaaaAAaaAa point 0 nongenic,nongenic,nongenic -3211 upstream,-390 upstream,-670 upstream {F40F12.5},{F40F12.7.1,F40F12.7.2},{F40F12.7.3} 2038 CB6871_redo III 9918742 1 C G 255 1.00 63 62 0 19 19 @GGGGGGGGGgGGGGgggGg point 0 silent GGG->GGC[Gly->Gly] {F40F12.3} 2039 CB6871_redo III 9920715 1 G T 255 1.00 63 62 0 29 29 @ttTTtTtTtttTTtTTtTttttttttttt point 0 SNP none {haw45505} 2041 CB6871_redo III 9920856 1 G T 255 1.00 63 62 0 24 24 @tTTttTtttttTTtTTttttTTTt point 0 SNP none {haw45507} 2042 CB6871_redo III 9938706 1 T C 20 3.62 63 62 34 46 80 @CCCCC.cc..cccCCccccCcc,CC.c.cccccCC..CCccc..cC..c.c.c..C.c.cc,,.C,,c,..,,C..,,,. point 0 nongenic 902 into {K03H1.5} 2045 CB6871_redo III 9942889 1 T A 255 1.00 63 62 0 32 32 @aAAAAAAAAAaAaAaaaaaaAaaAaAaAAaAa point 0 SNP none {haw45518} 2046 CB6871_redo III 9955904 1 G A 255 1.00 63 62 0 29 29 @aAaAAaAAAaaAaaaAaaaaaAaAaAAaA point 0 missense ACA->ATA[Thr->Ile] {K03H1.2.1,K03H1.2.2} 2047 CB6871_redo III 9956571 1 A C 255 1.00 63 62 0 22 22 @CccCCcCCccCcCcCccccCcC point 0 nongenic,nongenic,nongenic -458 upstream,-682 upstream,-683 upstream {K03H1.2.1,K03H1.2.2},{R10E12.1a},{R10E12.1b,R10E12.1c,R10E12.1d} 2050 CB6871_redo III 9962555 1 A C 13 1.00 63 0 0 4 4 @Ctcc point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -6442 upstream,300 into,457 into,465 into,471 into,499 downstream {K03H1.2.1,K03H1.2.2},{R10E12.1d},{R10E12.1c},{R10E12.1b},{R10E12.1a},{R10E12.2} 2053 CB6871_redo III 10016572 1 A G 255 1.00 63 62 1 32 33 @GGGGgg,ggGGgGGGggGGGGGGgGGggGGgGg point 0 SNP none {haw45557} 2054 CB6871_redo III 10019613 1 C A 88 1.00 63 62 1 5 6 @aaaaa, point 0 nongenic,nongenic -3159 upstream,-4086 upstream {C05B5.7},{M04D8.1} 2055 CB6871_redo III 10019932 1 G T 255 1.00 63 62 0 32 32 @ttttTTTTTTTTTTTTTTTtTTTTtTtTtTtT point 0 SNP none {haw45564} 5131 CB6871_redo III 10027249 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @.,,.ccC indel 0 nongenic,nongenic,nongenic -895 upstream,666 downstream,668 downstream {M04D8.3},{M04D8.2.2},{M04D8.2.1} 2056 CB6871_redo III 10027250 1 G C 24 1.00 63 6 3 5 8 @cCCct.,. point 0 nongenic,nongenic,nongenic -893 upstream,667 downstream,669 downstream {M04D8.3},{M04D8.2.2},{M04D8.2.1} 2058 CB6871_redo III 10032182 1 C T 54 1.00 63 62 4 7 11 @tTttTtt,.,, point 0 SNP none {haw45577} 2059 CB6871_redo III 10035095 1 G T 255 1.00 63 62 0 15 15 @tTTTtttTtTttTTt point 0 SNP none {haw45579} 2060 CB6871_redo III 10035117 1 G T 137 1.00 63 62 0 5 5 @TTtTt point 0 nongenic,nongenic -780 upstream,120 downstream {M04D8.6},{M04D8.8} 2061 CB6871_redo III 10035128 1 G T 117 1.00 63 62 0 4 4 @Tttt point 0 nongenic,nongenic -769 upstream,131 downstream {M04D8.6},{M04D8.8} 2062 CB6871_redo III 10035139 1 C T 204 1.00 63 62 0 8 8 @TtttttTt point 0 nongenic,nongenic -758 upstream,142 downstream {M04D8.6},{M04D8.8} 2063 CB6871_redo III 10035170 1 C T 255 2.19 63 62 0 18 18 @ttTttttTTttTTttTtt point 0 nongenic,nongenic -727 upstream,173 downstream {M04D8.6},{M04D8.8} 2064 CB6871_redo III 10035184 1 A T 255 3.12 63 62 0 21 21 @tttTTttTTttTttTTTTTTT point 0 nongenic,nongenic -713 upstream,187 downstream {M04D8.6},{M04D8.8} 2065 CB6871_redo III 10035309 1 G T 255 1.00 63 62 0 29 29 @TtTTTTTTTTtTtTTTtTTTTTTTTTTTT point 0 SNP none {haw45580} 2066 CB6871_redo III 10035384 1 G A 255 1.00 63 62 0 46 46 @AaAAAAAAAAaaAaAAaAAaaaaaAaaAaaAAaAAaAAAAAaAaAA point 0 SNP none {haw45581} 2067 CB6871_redo III 10035425 1 C A 255 1.62 63 62 0 33 33 @AAAAaAaAAAaAaAAaAaAAaAAAAaAAAAaaA point 0 nongenic,nongenic -472 upstream,428 downstream {M04D8.6},{M04D8.8} 2068 CB6871_redo III 10036023 1 G A 255 1.00 63 62 0 28 28 @AaAaacAAAAAAAAAaaAaaaAaaaAAA point 0 SNP none {haw45582} 5138 CB6871_redo III 10100856 0 X X -1000 -999.99 -1000 -1000 3 2 5 @.c.. indel 2 nongenic,nongenic -2881 upstream,-622 downstream {T16H12.5b.1},{T16H12.6} 2080 CB6871_redo III 10100858 1 C G 99 1.00 63 2 0 7 7 @ggggGGg point 0 nongenic,nongenic -2883 upstream,620 into {T16H12.5b.1},{T16H12.6} 2085 CB6871_redo III 10131666 1 C T 20 1.00 63 20 1 3 4 @TTt, point 0 nongenic,nongenic,nongenic -5299 upstream,452 into,953 into {ZK1128.7},{ZK1128.6b.1,ZK1128.6b.2},{ZK1128.6a} 2090 CB6871_redo III 10147954 1 T G 130 1.50 63 62 0 4 4 @ggGG point 0 nongenic -4734 upstream {K08E5.2a,K08E5.2b.2,K08E5.2b.3} 2091 CB6871_redo III 10148031 1 C G 255 1.25 63 62 0 24 24 @GGgGgggGGggGgggGGGGggggg point 0 nongenic -4657 upstream {K08E5.2a,K08E5.2b.2,K08E5.2b.3} 5140 CB6871_redo III 10213728 1 X X -1000 -999.99 -1000 -1000 6 -5 1 @..,... indel -1 SNP none {uCE3-1145} 2102 CB6871_redo III 10242563 1 G T 3 1.62 63 12 1 4 5 @.tttt point 0 nongenic,nongenic -11428 upstream,1770 into {Y70G10A.2},{Y70G10A.3} 2103 CB6871_redo III 10277507 1 C T 255 1.00 63 62 0 36 36 @tTtttTttTTtTtttTtTtttttTtTttttttTTTt point 0 nongenic,nongenic,nongenic -10231 upstream,-1515 upstream,967 into {R01H10.7},{K10G9.3},{R01H10.8} 2104 CB6871_redo III 10287323 1 C T 255 1.00 63 62 0 27 27 @TttTttttTttTtttttTtTttttTTt point 0 SNP none {haw45760} 5141 CB6871_redo III 10289290 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @,,.Gg indel 0 nongenic,nongenic -5738 upstream,784 downstream {K10G9.1},{K10G9.2} 2106 CB6871_redo III 10289344 1 G C 255 1.00 63 62 0 21 21 @cccCCcCcCcCcccCcccccc point 0 SNP none {haw45764} 2107 CB6871_redo III 10291745 1 C A 53 1.00 63 62 2 3 5 @Aaa.. point 0 nongenic -3282 upstream {K10G9.1} 2108 CB6871_redo III 10291756 1 T A 161 1.00 63 62 0 6 6 @aaaaAA point 0 nongenic -3271 upstream {K10G9.1} 2109 CB6871_redo III 10295469 1 G A 255 1.00 63 62 0 22 22 @aAaAaAaAaaAaaAAAAAaaAA point 0 nongenic 442 into {K10G9.1} 2110 CB6871_redo III 10320217 1 A G 83 6.00 63 30 0 4 4 @gggg point 0 nongenic,nongenic,nongenic -732 upstream,301 downstream,326 downstream {T07C4.10},{T07A5.6b},{T07A5.6c} 2111 CB6871_redo III 10354930 1 A T 255 1.00 63 62 0 25 25 @ttTtTTTTttttTttTtttTTTTTt point 0 SNP,three_prime_UTR none,none {haw45800},{T07C4.3b} 2113 CB6871_redo III 10361911 1 T G 255 1.00 63 62 0 15 15 @GGGgGggGgGGgGgg point 0 SNP none {haw45805} 2114 CB6871_redo III 10368133 1 G A 255 1.00 63 62 0 28 28 @aaAAaaAaAaaaaAAaAaAAaAAAAAAA point 0 SNP none {haw45808} 2115 CB6871_redo III 10368773 1 C G 255 1.00 63 62 0 31 31 @GgGGGGggggGgggggggggGGggGgGgggg point 0 silent,SNP TCC->TCG[Ser->Ser],none {C38H2.1},{haw45810} 2124 CB6871_redo III 10378480 1 A G 86 1.00 63 0 2 6 8 @..gggggG point 0 nongenic -3183 upstream {C38H2.2} 5144 CB6871_redo III 10382032 0 X X -1000 -999.99 -1000 -1000 2 2 4 @.,CCc indel 0 nongenic -368 downstream {C38H2.2} 2130 CB6871_redo III 10385216 1 C G 5 1.00 63 46 3 4 7 @...GGGG point 0 nongenic,nongenic 15 downstream,301 downstream {C38H2.2},{C38H2.3} 2131 CB6871_redo III 10388877 1 A T 43 1.00 63 62 2 5 7 @TtTtT.. point 0 nongenic -2413 upstream {C38H2.3} 2132 CB6871_redo III 10397839 1 C G 9 1.00 63 62 2 3 5 @GGG,. point 0 nongenic -1873 upstream {M03C11.1} 2133 CB6871_redo III 10399084 1 C A 255 1.00 63 62 0 26 26 @aAaAAaaAAAaAAtAaAaaaAAaAAa point 0 SNP none {haw45839} 2135 CB6871_redo III 10454269 1 G A 255 1.19 63 62 0 16 16 @AAAaAAAaaaaaaaAa point 0 SNP none {haw45927} 5147 CB6871_redo III 10460400 0 X X -1000 -999.99 -1000 -1000 5 -1 4 @,.,,.GG indel 0 nongenic,nongenic -1115 upstream,-63 upstream {D2045.1a,D2045.1b.2,D2045.1c},{D2045.2} 2136 CB6871_redo III 10460401 1 A G 23 1.00 63 12 3 5 8 @GgGGg,,, point 0 nongenic,nongenic -1113 upstream,-64 upstream {D2045.1a,D2045.1b.2,D2045.1c},{D2045.2} 2137 CB6871_redo III 10460402 1 T A 13 1.00 63 22 3 4 7 @aAAa,,, point 0 nongenic,nongenic -1112 upstream,-65 upstream {D2045.1a,D2045.1b.2,D2045.1c},{D2045.2} 2138 CB6871_redo III 10482439 1 G A 255 1.00 63 62 0 38 38 @aaAAAaAAaAAaaaaaaaaAAAAaAaaaaaAaaaAAaA point 0 nongenic,nongenic,nongenic -5576 upstream,226 into,407 downstream {F43D9.1},{D2045.8},{D2045.7} 2139 CB6871_redo III 10483638 1 C A 149 1.00 63 62 2 7 9 @AAAaaAa,. point 0 missense,SNP CCA->CAA[Pro->Gln],none {D2045.8},{haw45977} 2140 CB6871_redo III 10483727 1 G A 255 1.00 63 62 0 36 36 @aAAAAAAaAaaaAAaaaAaAaaaAaAaaaAaAAaaA point 0 three_prime_UTR none {D2045.8} 2141 CB6871_redo III 10498007 1 G A 255 1.00 63 62 0 17 17 @aaAAaaAAaaaaAaaAa point 0 SNP none {haw45998} 2146 CB6871_redo III 10499626 1 C A 38 1.00 63 62 3 4 7 @,,.aAAA point 0 nongenic,nongenic 529 into,544 downstream {F43D9.1},{F43D9.2} 2147 CB6871_redo III 10499627 1 A C 125 1.00 63 38 0 4 4 @cCCC point 0 nongenic,nongenic 528 into,543 downstream {F43D9.1},{F43D9.2} 2148 CB6871_redo III 10500602 1 G A 255 1.00 63 62 0 23 23 @aAaAAaaaaaAaAaaAAAAaAAa point 0 silent,SNP TTC->TTT[Phe->Phe],none {F43D9.2},{haw46003} 2149 CB6871_redo III 10500798 1 C T 255 1.00 63 62 0 25 25 @TttTtttTtTTTtTTttTTtttTTt point 0 SNP none {haw46004} 2150 CB6871_redo III 10500854 1 C T 255 1.00 63 62 0 17 17 @TttttTtttTtTTttTt point 0 SNP none {haw46006} 2151 CB6871_redo III 10501170 1 C T 255 1.00 63 62 0 24 24 @TtTtTtttTtttTTtttTTTTtTt point 0 SNP none {haw46010} 2152 CB6871_redo III 10502428 1 G A 255 1.00 63 62 0 41 41 @taaaaAaaaaAAaaAaaAAaaAAAaaaaatAAaAAaaaaAA point 0 SNP none {haw46016} 2153 CB6871_redo III 10502726 1 C T 255 1.00 63 62 0 28 28 @TTtTTtttTTttTttttTtTTtTtTttT point 0 SNP none {haw46017} 2154 CB6871_redo III 10503428 1 G A 255 1.00 63 62 0 35 35 @AaaaaAAAAaAAaaaaaaAAaaAAaAAAaaaaaaA point 0 nongenic,nongenic 311 into,531 downstream {F43D9.2},{F43D9.5} 2155 CB6871_redo III 10509767 1 T G 36 1.00 63 46 0 4 4 @GgGg point 0 missense GTC->GGC[Val->Gly] {F43D9.3a,F43D9.3b} 2156 CB6871_redo III 10512573 1 C T 255 1.00 63 62 0 33 33 @ttTTttTTTTtTTTtttTttgtTTtTTttttTt point 0 SNP,three_prime_UTR none,none {haw46030},{F43D9.3a} 2157 CB6871_redo III 10512825 1 C T 255 1.00 63 62 0 32 32 @TTTttTtTttTtTtTTtttTtTtTTttTttTt point 0 SNP,three_prime_UTR none,none {haw46031},{F43D9.3a} 2158 CB6871_redo III 10513932 1 C T 255 1.00 63 62 0 21 21 @TtttttTTttttTTtTtTTTt point 0 SNP none {haw46034} 2159 CB6871_redo III 10514115 1 G A 255 1.00 63 62 0 27 27 @aaAaAAAaaaaAAAAAaaaAAAaAAAa point 0 SNP none {haw46035} 5149 CB6871_redo III 10514381 1 X X -1000 -999.99 -1000 -1000 6 -3 3 @..,.., indel -1 SNP none {uCE3-1167} 2160 CB6871_redo III 10514382 1 G C 9 1.00 63 6 2 3 5 @cCc., point 0 SNP none {uCE3-1167} 2161 CB6871_redo III 10514383 1 C G 7 1.00 63 8 2 3 5 @gGg., point 0 nongenic,nongenic -6178 upstream,3481 into {T21C12.1b},{F43D9.3b} 2163 CB6871_redo III 10520156 1 G T 54 1.00 63 54 2 5 7 @TtTtT.. point 0 nongenic,nongenic -405 upstream,-531 upstream {T21C12.1b},{T21C12.1a} 2164 CB6871_redo III 10520298 1 A C 255 1.00 63 62 0 35 35 @CcCCcCccccccccCCcCccCCCCcCccCCccCCc point 0 SNP none {haw46040} 2165 CB6871_redo III 10528187 1 G C 255 1.00 63 62 0 41 41 @CcccCCcCcCCccCcccCcCcCccCCccCCccCccCCcccC point 0 SNP none {haw46050} 5153 CB6871_redo III 10529997 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,,.AA indel 0 inframe none {T21C12.1a} 2166 CB6871_redo III 10529998 1 C T 8 1.00 63 62 2 2 4 @Tt,, point 0 missense CCT->CTT[Pro->Leu] {T21C12.1a} 5155 CB6871_redo III 10546966 2 X X -1000 -999.99 -1000 -1000 7 -5 2 @...,.,. indel -2 SNP none {pas48914} 5156 CB6871_redo III 10551513 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,.CCcc indel 0 three_prime_UTR none {T21C12.4b} 2171 CB6871_redo III 10553062 1 A C 33 1.00 63 42 2 2 4 @.,Cc point 0 missense GTT->GGT[Val->Gly] {T21C12.4a,T21C12.4b} 2181 CB6871_redo III 10631416 1 G A 255 1.00 63 62 0 41 41 @AAaaAaaAAAaAAaAAAaAAAAaAAAAAAAaAaaAaaAAAA point 0 missense CGC->TGC[Arg->Cys] {Y39A1A.9} 2183 CB6871_redo III 10644784 1 G A 255 1.00 63 62 0 33 33 @AaaAaAAAAaaAaAAAaAAAAAaaaAAaaAaAA point 0 missense CGA->CAA[Arg->Gln] {Y39A1A.12.1,Y39A1A.12.2} 2187 CB6871_redo III 10694917 1 A T 255 1.00 63 62 0 37 37 @ttgTTTtttTTttTTttTTtttTTTTTttTttTTTTT point 0 nongenic,nongenic -2140 upstream,387 into {Y39A1A.18},{Y39A1A.19} 2188 CB6871_redo III 10710303 1 G A 255 1.00 63 62 0 37 37 @AaaAAAaaaAaAAaAAAAAAaaaaaaAAaaAaaaAAa point 0 missense CGT->TGT[Arg->Cys] {W09D10.5} 2189 CB6871_redo III 10752911 1 G A 255 1.88 63 62 1 19 20 @AaAaaaaaaAAaAaaa.aAa point 0 missense ACC->ATC[Thr->Ile] {K01G5.2b,K01G5.2c} 2190 CB6871_redo III 10860290 1 G A 255 1.00 63 62 0 10 10 @aaaAAaAaAA point 0 nongenic 2123 into {Y39A1C.2} 2191 CB6871_redo III 10875261 1 A G 7 1.00 63 62 2 5 7 @,,gGGgg point 0 nongenic,nongenic -81 upstream,848 downstream {C44B9.2},{C44B9.1} 2192 CB6871_redo III 11016885 1 T C 255 1.00 63 62 0 16 16 @CCcCcCCCcccCCccc point 0 SNP none {haw46705} 2193 CB6871_redo III 11107062 1 A C 3 1.00 63 12 1 4 5 @CCCC, point 0 nongenic,nongenic -1135 upstream,-7226 upstream {Y48A6C.6},{W09D6.6} 5161 CB6871_redo III 11138477 0 X X -1000 -999.99 -1000 -1000 6 -5 1 @,,,,cc.c. indel 4 nongenic,nongenic -302 downstream,668 downstream {Y47D3A.2},{Y47D3A.1} 2195 CB6871_redo III 11267169 1 G A 255 1.00 63 62 0 30 30 @aAaAAaAaAAAaaAAAAAaaAAAAAaAAaa point 0 missense GCG->GTG[Ala->Val] {Y47D3A.17c} 2199 CB6871_redo III 11326567 1 G T 169 1.00 63 62 1 7 8 @TttTTTT, point 0 SNP,three_prime_UTR none,none {haw46989},{T28D6.6} 2200 CB6871_redo III 11326568 1 A G 169 1.00 63 62 1 7 8 @GggGGGG, point 0 SNP,three_prime_UTR none,none {haw46990},{T28D6.6} 2201 CB6871_redo III 11342775 1 A C 52 1.00 63 62 3 5 8 @ccCcC.,, point 0 nongenic,nongenic,nongenic,nongenic -406 upstream,217 into,654 downstream,670 downstream {T28D6.9},{T28D6.6},{T28D6.5b},{T28D6.5a.1} 161469 CB6871_redo III 11400029 66 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2356 to 2422 bp into {Y47D3B.3} 2206 CB6871_redo III 11469758 1 C T 255 1.00 63 62 0 22 22 @ttTttTtttTtTtttTTTTTtT point 0 premature_stop TGG->TAG[Trp->stop] {Y47D3B.9} 2207 CB6871_redo III 11472333 1 T A 255 1.00 63 62 0 14 14 @AaaaAaaAaaaaaa point 0 nongenic -1644 upstream {Y47D3B.9} 2209 CB6871_redo III 11480573 1 G A 255 1.00 63 62 0 26 26 @aAaaAaAaaAAAAaAAAAaaAAaAAa point 0 SNP none {haw47230} 2210 CB6871_redo III 11486301 1 G C 255 1.00 63 62 0 16 16 @cccccccCCcCCCccc point 0 SNP none {haw47238} 2211 CB6871_redo III 11504646 1 C A 255 1.00 63 62 0 21 21 @AaAAaaAAAAaAaAAAAAAaA point 0 SNP none {haw47276} 2212 CB6871_redo III 11516787 1 C T 255 1.00 63 62 0 23 23 @ttTTtTttTTTtTtTttTTTTTT point 0 SNP none {haw47292} 2216 CB6871_redo III 11529305 1 G A 107 1.00 63 62 0 4 4 @aaAa point 0 nongenic,nongenic -5251 upstream,3051 into {Y66D12A.14},{Y66D12A.15} 2221 CB6871_redo III 11529330 1 G T 3 1.38 35 0 0 7 7 @atttAAt point 0 nongenic,nongenic -5226 upstream,3076 into {Y66D12A.14},{Y66D12A.15} 2222 CB6871_redo III 11529331 1 A T 10 1.50 36 0 0 8 8 @ttgtTTtt point 0 nongenic,nongenic -5225 upstream,3077 into {Y66D12A.14},{Y66D12A.15} 2223 CB6871_redo III 11543276 1 G A 255 1.00 63 62 0 22 22 @AaaaaaaAaAAAAaAAaAaAAa point 0 missense,SNP GGA->GAA[Gly->Glu],none {Y66D12A.14},{haw47330,uCE3-1248} 2225 CB6871_redo III 11576713 1 C G 255 1.00 63 62 0 26 26 @gGGggGggGggGgggGggggggGGGg point 0 missense,SNP GCA->GGA[Ala->Gly],none {Y66D12A.8},{haw47425} 2227 CB6871_redo III 11676497 1 G A 255 1.00 63 62 0 20 20 @aaAaaaAaAAaAAAaAaAAa point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -20074 upstream,1046 into,1053 into,17164 into,1953 into,953 into {Y41C4A.6},{Y41C4A.4a},{Y41C4A.4d},{Y41C4A.4c},{Y41C4A.4e},{Y41C4A.4b} 2228 CB6871_redo III 11682308 1 G T 255 3.56 63 62 0 29 29 @TTtTTTTTTTTTTTTTTTTTTTTTTtttt point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -14263 upstream,11353 into,6764 into,6857 into,6864 into,7764 into {Y41C4A.6},{Y41C4A.4c},{Y41C4A.4b},{Y41C4A.4a},{Y41C4A.4d},{Y41C4A.4e} 2229 CB6871_redo III 11692824 1 G A 255 1.00 63 62 0 35 35 @aAAaAAaaaAAaAaAaaAAaAaAAaAAaaAAaAaA point 0 nongenic,nongenic,nongenic,nongenic,nongenic -3747 upstream,614 into,837 into,894 into,897 into {Y41C4A.6},{Y41C4A.4b,Y41C4A.4d},{Y41C4A.4c},{Y41C4A.4e},{Y41C4A.4a} 2230 CB6871_redo III 11692825 1 G A 255 1.00 63 62 0 35 35 @aAAaAAaaaAAaAaAaaAAaAaAAaAAaaAAaAaA point 0 nongenic,nongenic,nongenic,nongenic,nongenic -3746 upstream,613 into,836 into,893 into,896 into {Y41C4A.6},{Y41C4A.4b,Y41C4A.4d},{Y41C4A.4c},{Y41C4A.4e},{Y41C4A.4a} 2233 CB6871_redo III 11694298 1 C A 102 1.00 63 62 0 5 5 @aAaaA point 0 nongenic,nongenic,nongenic -2273 upstream,577 downstream,580 downstream {Y41C4A.6},{Y41C4A.4a},{Y41C4A.4e} 2234 CB6871_redo III 11752385 1 G A 255 1.00 63 62 0 23 23 @AaAAAAaAaAaaaaAAaaaAAaA point 0 nongenic,nongenic -22613 upstream,875 into {C24H11.6},{C24H11.7} 2235 CB6871_redo III 11785297 1 G A 255 1.00 63 62 0 29 29 @AaAAAAAaaaAAaaaaAAAAAaAaAAaaA point 0 premature_stop CAG->TAG[Gln->stop] {C24H11.3} 2236 CB6871_redo III 11809758 1 T C 255 1.00 63 62 0 20 20 @CCCCccccccccCccCCCCC point 0 nongenic,nongenic -121 upstream,313 downstream {C18D11.6},{C18D11.9} 2237 CB6871_redo III 11833079 1 A C 12 1.00 63 2 0 4 4 @CCCC point 0 nongenic,nongenic,nongenic,nongenic -14955 upstream,1728 into,2222 into,630 into {Y56A3A.3},{Y56A3A.1a},{Y56A3A.1b.1},{Y56A3A.1b.2} 2239 CB6871_redo III 11861725 1 A T 255 1.00 63 62 0 17 17 @tTTttTtTtTtTtttTg point 0 nongenic,nongenic 408 into,564 downstream {Y56A3A.2},{Y56A3A.4} 2240 CB6871_redo III 11882137 1 G A 250 1.00 63 62 0 22 22 @AAAAAAAAAAaAaAAAAaaAAa point 0 nongenic,nongenic -3433 upstream,339 downstream {Y56A3A.6.1},{Y56A3A.10} 161470 CB6871_redo III 11959354 54 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered non-exonic, 656 to 710 bp into,non-exonic, 660 to 714 bp into {Y56A3A.27.2},{Y56A3A.27.1} 2256 CB6871_redo III 11996049 1 G C 16 1.00 63 0 0 9 9 @CCCCCCCCC point 0 nongenic,nongenic 3287 into,3427 into {Y56A3A.32.2},{Y56A3A.32.1} 2257 CB6871_redo III 12008909 1 C G 226 5.50 63 62 0 14 14 @GgGgGgGggggggg point 0 nongenic,nongenic -11521 upstream,-6075 upstream {Y79H2A.1a.1},{Y56A3A.33} 2259 CB6871_redo III 12060765 1 T A 255 1.00 63 62 0 17 17 @aaAAAAAaAAaaAAAaA point 0 SNP none {haw48229} 2260 CB6871_redo III 12103249 1 G T 59 1.00 63 48 2 5 7 @TTTTT,. point 0 missense CAC->AAC[His->Asn] {Y75B8A.3} 2269 CB6871_redo III 12239827 1 G A 132 5.19 63 62 0 7 7 @aAAAAaa point 0 nongenic,nongenic,nongenic 421 downstream,457 downstream,728 downstream {Y75B8A.22.1},{Y75B8A.22.2},{Y75B8A.21} 2270 CB6871_redo III 12239848 1 A C 5 2.12 63 18 2 6 8 @,.cccccc point 0 nongenic,nongenic,nongenic 400 downstream,436 downstream,749 downstream {Y75B8A.22.1},{Y75B8A.22.2},{Y75B8A.21} 161471 CB6871_redo III 12347563 51 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3607 to 3658 bp into {Y75B8A.30} 2277 CB6871_redo III 12416656 1 C T 14 1.00 63 62 8 9 17 @TT.TT.t.t,t,,TT., point 0 SNP none {haw48825} 2278 CB6871_redo III 12426454 1 C T 255 1.00 63 62 0 23 23 @TtTtTTTTttttTttTttTTTTt point 0 nongenic,nongenic,nongenic -289 upstream,-320 upstream,-5066 upstream {Y49E10.14.1},{Y49E10.14.2},{Y49E10.11b} 2279 CB6871_redo III 12464681 1 G A 255 1.00 63 62 0 26 26 @AaAaAAAAAaAAAAaaAaAAAAAaAA point 0 nongenic,nongenic -1819 upstream,1023 into {Y49E10.22},{Y49E10.28} 2280 CB6871_redo III 12511900 1 A G 250 3.00 63 62 0 17 17 @GgGGGGGGGGGGGGGGG point 0 ncRNA none {Y111B2A.5b} 2281 CB6871_redo III 12573264 1 G C 255 4.25 63 62 0 31 31 @ccccCCCcCccCCcCccCCccCCCCcCcccC point 0 SNP none {haw49035} 2282 CB6871_redo III 12583126 1 A G 255 1.00 63 62 0 21 21 @GgGGGgGgGGgGGgGGGGGGG point 0 SNP none {haw49061} 2283 CB6871_redo III 12589042 1 T C 255 1.00 63 62 0 18 18 @cCCCcCCccCCCCccCcc point 0 nongenic -13793 upstream {Y111B2A.9a} 2284 CB6871_redo III 12596781 1 T A 216 1.00 63 62 0 17 17 @AAAAAAAAAAAAAAAAA point 0 nongenic,nongenic,nongenic,nongenic -21532 upstream,755 into,843 into,880 into {Y111B2A.9a},{Y111B2A.10a,Y111B2A.10b.3},{Y111B2A.10b.2},{Y111B2A.10b.1} 2285 CB6871_redo III 12603549 1 G T 255 1.44 63 62 0 18 18 @Tttttttttttttttttt point 0 nongenic,nongenic,nongenic -5056 upstream,-5621 upstream,4364 into {Y111B2A.10b.1},{Y111B2A.12},{Y111B2A.11} 2287 CB6871_redo III 12608701 1 A C 9 1.00 63 2 1 5 6 @C.cgcc point 0 nongenic,nongenic -351 upstream,-469 upstream {Y111B2A.11},{Y111B2A.12} 161472 CB6871_redo III 12614470 523 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 5299 to 5822 bp into {Y111B2A.12} 2292 CB6871_redo III 12636079 1 T C 255 1.00 63 62 0 21 21 @ccccCcCcCcccccccCCCcC point 0 nongenic,nongenic 9623 into,9628 into {Y111B2A.14.2},{Y111B2A.14.1} 2293 CB6871_redo III 12672105 1 G A 18 1.00 63 14 3 4 7 @...aAAA point 0 nongenic,nongenic,nongenic -1453 upstream,-9953 upstream,830 into {Y111B2A.17},{Y111B2A.15},{Y111B2A.16} 161473 CB6871_redo III 12679320 67 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 5761 to 5828 bp into {Y111B2A.17} 2294 CB6871_redo III 12683449 1 A C 255 1.00 63 62 0 25 25 @cccccCcCCcccccCCCcccccccC point 0 SNP none {haw49231} 2299 CB6871_redo III 12725512 1 A T 255 1.38 63 62 0 30 30 @ttTtTtTTtTttTTtTTTTTTttTtTtttt point 0 nongenic,nongenic -20820 upstream,11065 into {Y111B2A.21},{Y111B2A.22} 2302 CB6871_redo III 12778927 1 G T 255 1.00 63 62 0 28 28 @tTTTttTTTTtTttTTTTttTttTtTTt point 0 nongenic,nongenic -6108 upstream,682 into {ZC482.5},{ZC482.1} 2304 CB6871_redo III 12890857 1 G A 255 1.56 63 62 1 34 35 @aaaaAAAAaAAAa,AaAaAAaAaAAAaaAAAAaaA point 0 nongenic,nongenic -14513 upstream,764 into {Y37D8A.14.1},{Y37D8A.13} 2305 CB6871_redo III 12903048 1 C T 255 1.00 63 62 0 18 18 @tTtTttTTtTtTTTTtTt point 0 nongenic,nongenic -11427 upstream,-2322 upstream {Y37D8A.13},{Y37D8A.14.1} 2306 CB6871_redo III 12952987 1 G A 255 1.00 63 62 0 23 23 @AAaAaaaaaaaAaAaAAAAaaAa point 0 three_prime_UTR none {Y39E4A.2b} 2307 CB6871_redo III 12953211 1 T G 255 1.00 63 62 0 24 24 @gGgGggggggGgGGggggggGGGg point 0 missense,SNP AAT->ACT[Asn->Thr],none {Y39E4A.2a,Y39E4A.2b},{snp_Y39E4A[3]} 161474 CB6871_redo III 13032294 51 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1492 to 1543 bp into {F14F7.5} 2312 CB6871_redo III 13032421 1 T C 60 1.00 56 28 0 4 4 @cCCC point 0 nongenic,nongenic,nongenic -2874 upstream,-7560 upstream,1620 into {F14F7.4},{F54F12.2a},{F14F7.5} 2314 CB6871_redo III 13032541 1 G C 124 1.19 63 58 0 13 13 @ccCcCccCcccCt point 0 nongenic,nongenic,nongenic -2994 upstream,-7440 upstream,1740 into {F14F7.4},{F54F12.2a},{F14F7.5} 2315 CB6871_redo III 13032550 1 T C 110 1.25 63 62 0 10 10 @cCccCcccCc point 0 nongenic,nongenic,nongenic -3003 upstream,-7431 upstream,1749 into {F14F7.4},{F54F12.2a},{F14F7.5} 2316 CB6871_redo III 13155781 1 G A 255 1.00 63 62 1 27 28 @aaAaaAaAAAaAAaA.AAAaAaaaAAAa point 0 SNP none {haw49837} 2317 CB6871_redo III 13165427 1 G A 255 1.81 63 62 0 24 24 @aaaAaAaaaAaaaAaaaAaAAAaa point 0 nongenic 191 downstream {Y39E4B.2} 2318 CB6871_redo III 13187213 1 T A 255 1.00 63 62 0 30 30 @aAAaAAAaaaaAAAaaAAAaAAaaaAAAAA point 0 nongenic,nongenic -60 upstream,-777 upstream {Y39E4B.12a.2,Y39E4B.12b,Y39E4B.12c},{Y39E4B.12a.1} 2319 CB6871_redo III 13202983 1 G T 255 3.88 63 62 0 22 22 @TTTTTTTTTtTTTTTtTTTatt point 0 nongenic,nongenic,nongenic,nongenic -1880 upstream,1788 into,1790 into,1794 into {Y39E4B.11},{Y39E4B.12b},{Y39E4B.12a.1,Y39E4B.12a.2},{Y39E4B.12c} 2320 CB6871_redo III 13264546 1 C A 255 1.25 63 62 0 23 23 @AAAaAAAaaAAaaAAAaaAaAaA point 0 nongenic,nongenic -1206 upstream,307 into {F56A8.5},{F56A8.4} 2321 CB6871_redo III 13264548 1 T A 255 1.25 63 62 0 25 25 @AAaAAAaaAAaaAAAaaAaAaAAaa point 0 nongenic,nongenic -1204 upstream,305 into {F56A8.5},{F56A8.4} 2322 CB6871_redo III 13265024 1 A T 255 1.00 63 62 0 25 25 @TtTTtTTTTtCtTTTTTTTTTtTTt point 0 nongenic,nongenic -728 upstream,171 downstream {F56A8.5},{F56A8.4} 2323 CB6871_redo III 13281779 1 A G 255 1.00 63 62 0 30 30 @GGGgggGgGggGgGGgGGGggGGggGGGGG point 0 SNP none {haw49884} 2331 CB6871_redo III 13510140 1 C T 255 1.00 63 62 0 35 35 @TttttTTtTTTtTTttttTtTTTttTTtTttTttt point 0 silent CTG->CTA[Leu->Leu] {T28A8.7.1,T28A8.7.2} 5167 CB6871_redo III 13536918 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,.,CC indel 1 nongenic,nongenic -12942 upstream,-2917 downstream {Y76A2B.1},{Y76A2B.2} 2335 CB6871_redo III 13536919 1 C A 59 1.00 63 62 0 8 8 @AaAGGGGG point 0 nongenic,nongenic -12943 upstream,2916 into {Y76A2B.1},{Y76A2B.2} 2359 CB6871_redo III 13750753 1 T C 255 3.06 63 62 0 17 17 @CcCcccCCcCCcCccCC point 0 nongenic,nongenic -1597 upstream,-2184 upstream {K08E3.10},{K08E3.2} 2362 CB6871_redo IV 149978 1 A G 255 1.00 63 62 0 33 33 @GGgGgGGGGGGGggGGgGgGgGGgGgggGGGGG point 0 SNP none {haw50079} 2368 CB6871_redo IV 235661 1 G A 255 1.00 63 62 0 37 37 @aaAaaAaaAAAaAAAaAAaAaaaAAaaAAAaaaAAAA point 0 nongenic,nongenic -3886 upstream,1790 into {R02D3.3.1},{R02D3.4} 2369 CB6871_redo IV 254920 1 G A 255 1.00 63 62 0 32 32 @AaAaaAAaAaAAAAaAAaAaAaaAAaaaaaaA point 0 missense CCA->TCA[Pro->Ser] {R02D3.7} 2370 CB6871_redo IV 259872 1 G A 255 1.06 63 62 0 24 24 @aAAAAAaAAAaAAAaAAAaAaaAA point 0 nongenic,nongenic,nongenic,nongenic -660 upstream,-667 upstream,111 downstream,327 downstream {T21D12.2.1},{T21D12.2.2},{T21D12.3.1},{T21D12.3.2} 2371 CB6871_redo IV 270503 1 G A 255 1.00 63 62 0 32 32 @aAaaAAaAAaaaaaaaAaAaaAaAAaAAAAAa point 0 nongenic 1097 into {T21D12.11} 2372 CB6871_redo IV 273897 1 C A 255 1.44 63 62 0 18 18 @AaaAaAAAaAaaaaaaaa point 0 nongenic,nongenic,nongenic -510 upstream,-672 upstream,-704 upstream {T21D12.5},{T21D12.9c.1},{T21D12.9a,T21D12.9c.2} 2374 CB6871_redo IV 483814 1 A T 255 1.00 63 62 0 36 36 @ttTTtTtTttTtTtTTtttTttTtTtTTTTCtTTtt point 0 nongenic -2646 upstream {M04G7.3a,M04G7.3b.1} 2375 CB6871_redo IV 486384 1 A T 255 1.00 63 62 0 24 24 @tTTtTtTTtTTtttttttTtttTt point 0 nongenic -5216 upstream {M04G7.3a,M04G7.3b.1} 2376 CB6871_redo IV 495583 1 T G 255 1.00 63 62 0 28 28 @GGGgGGgggGGgGGGGGgGgGgGGggGg point 0 SNP none {haw50110} 2378 CB6871_redo IV 659198 1 C A 36 1.00 63 20 0 4 4 @AaAa point 0 nongenic,nongenic,nongenic -6324 upstream,602 downstream,610 downstream {K11H12.7.1},{K11H12.8b},{K11H12.8a} 2380 CB6871_redo IV 669630 1 G A 255 1.00 63 62 0 38 38 @AaaAAAaaAaaaaAAAaaaaaAAAaaaaaAAAAaaaAa point 0 missense CCA->TCA[Pro->Ser] {K11H12.11} 2383 CB6871_redo IV 743294 1 A G 255 1.00 63 62 0 24 24 @GGgGGGgGGggGGGgggGGggGGg point 0 nongenic,nongenic -6572 upstream,1212 into {Y55F3C.3b},{Y55F3C.3a} 2384 CB6871_redo IV 757658 1 T A 255 1.00 63 62 0 40 40 @aAaAAAAAAaaaaaAAaaAAAAAaAAaAaaaaAaAAaaaA point 0 missense TTC->TAC[Phe->Tyr] {Y55F3C.2} 2385 CB6871_redo IV 790792 1 A C 11 1.00 63 62 3 5 8 @..,cCccC point 0 nongenic,nongenic 3484 into,56 downstream {F56B3.4a,F56B3.4b},{F56B3.6} 2386 CB6871_redo IV 807998 1 T C 255 1.00 63 62 0 24 24 @cccccCCccCccccCCccCcCCCC point 0 SNP none {haw50174} 2392 CB6871_redo IV 976182 1 T C 255 1.00 63 62 0 20 20 @ccCccccCCccCCCCCcccC point 0 SNP none {haw50433} 2393 CB6871_redo IV 976984 1 A G 255 1.00 63 62 0 23 23 @GGggggGgGgGGGggggGgGGGG point 0 SNP none {haw50435} 2394 CB6871_redo IV 991371 1 G C 255 1.06 63 62 0 32 32 @ccCCCcCccCCCccccccccCcCCCcCccCCC point 0 nongenic,nongenic -917 upstream,-931 upstream {Y55F3AM.6a,Y55F3AM.6b},{Y55F3AM.7} 2395 CB6871_redo IV 997032 1 C G 255 1.00 63 62 0 23 23 @GgGgggggggGGGgGGgGgggGg point 0 nongenic,nongenic,nongenic -2197 upstream,600 into,947 downstream {Y55F3AM.5},{Y55F3AM.6a},{Y55F3AM.6b} 2397 CB6871_redo IV 1061847 1 T G 9 1.00 63 20 2 2 4 @,GG, point 0 nongenic 1341 into {Y55F3AM.14} 2404 CB6871_redo IV 1197597 1 G T 255 1.00 63 62 0 30 30 @TTTTTTTTTTTTTttTttttTTtTTtTTtt point 0 SNP none {haw50776} 2405 CB6871_redo IV 1201163 1 G C 52 1.00 63 0 0 4 4 @CccC point 0 nongenic 684 into {Y104H12D.3} 2409 CB6871_redo IV 1386027 1 A G 255 1.00 63 62 0 24 24 @GGGGggGgggGGgGGGGggGgGGg point 0 nongenic,nongenic -134 upstream,-9464 upstream {Y104H12A.1},{F58F6.3} 2410 CB6871_redo IV 1438459 1 A T 255 1.00 63 62 0 27 27 @tttttTTttTTtttTttttTTTTtTtT point 0 missense TCC->ACC[Ser->Thr] {Y77E11A.11.1,Y77E11A.11.2} 2411 CB6871_redo IV 1453831 1 G A 255 1.00 63 62 0 35 35 @aAAaaAAAaaAAAAaaaaAAAAaaaaAAAAAAAAA point 0 nongenic -3242 upstream {Y77E11A.2} 2420 CB6871_redo IV 1477963 1 T A 30 1.00 63 62 5 9 14 @AAaaAAaA,.,,,g point 0 nongenic,nongenic -2854 upstream,-7516 upstream {Y77E11A.12b},{Y77E11A.16} 2421 CB6871_redo IV 1482043 1 G A 255 1.00 63 62 0 19 19 @AaAaaaaAAAaAaAAAaAa point 0 nongenic,nongenic -3436 upstream,-6934 upstream {Y77E11A.16},{Y77E11A.12b} 2422 CB6871_redo IV 1483377 1 T A 255 1.00 63 62 0 16 16 @AAaAAAAAAAaAAaaA point 0 nongenic,nongenic -2102 upstream,-8268 upstream {Y77E11A.16},{Y77E11A.12b} 161480 CB6871_redo IV 1507203 266 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered codon 306 to codon 334 (6 % of 452 codons) {Y77E11A.1.1,Y77E11A.1.2} 2426 CB6871_redo IV 1513856 1 G A 255 1.00 63 62 0 22 22 @aaAAAAaAAAAAAAaAAaAaAA point 0 nongenic 1371 into {K03H6.2} 2427 CB6871_redo IV 1516026 1 G A 255 1.44 63 62 6 20 26 @,aaa..,..aaaaaAAaAAaaaAaaa point 0 nongenic,nongenic 501 into,799 downstream {K03H6.7},{K03H6.2} 2428 CB6871_redo IV 1605502 1 G A 255 1.00 63 62 0 29 29 @aaAaaAaAaAAAaaaaAAAaAaAaaaAAA point 0 silent CTG->CTA[Leu->Leu] {Y41D4B.12a,Y41D4B.12b} 2430 CB6871_redo IV 1677009 1 G A 255 2.88 63 62 0 26 26 @aaaaaaaaAAAAAaaAAAAaAAaaAa point 0 nongenic,nongenic -22887 upstream,292 into {K08D12.5},{Y41D4B.24} 2431 CB6871_redo IV 1695528 1 G C 255 1.00 63 62 0 24 24 @cCcCCCccccccCcccCCcccCcc point 0 nongenic,nongenic -13370 upstream,-4368 upstream {Y41D4B.24},{K08D12.5} 2432 CB6871_redo IV 1726632 1 G T 52 6.00 63 62 2 3 5 @,.Ttt point 0 nongenic -2490 upstream {K08D12.7} 2433 CB6871_redo IV 1783081 1 G A 255 1.00 63 62 0 29 29 @AaaAaAaAaaAAAaAAAAaaAAaAaAAaa point 0 nongenic -1520 upstream {Y41D4A.8} 2435 CB6871_redo IV 1787086 1 A T 255 1.00 63 62 0 16 16 @tTTttTtttTtTTTTt point 0 nongenic -5525 upstream {Y41D4A.8} 2436 CB6871_redo IV 1812233 1 A G 26 4.25 0 24 0 25 25 @ggGgGgGgggggGGGgGGGgggGGG point 0 nongenic,nongenic -8252 upstream,2865 into {Y38C1BA.1},{Y38C1BA.2a,Y38C1BA.2b} 2437 CB6871_redo IV 1847094 1 G A 255 1.00 63 62 1 31 32 @AaaaAaaAaAaAaAAaaAaAAA,AAAaaaaaa point 0 nongenic,nongenic,splice_acceptor -871 upstream,91 into,none {F55A8.2a.1,F55A8.2a.2},{K07A9.4},{K07A9.4} 2438 CB6871_redo IV 1868017 1 G A 255 1.00 63 62 0 38 38 @AAaaaaaAAaAaAaAAAaAaaAAAAAaaAaAaAAaaAa point 0 nongenic,nongenic,nongenic,nongenic,nongenic -2992 upstream,11922 into,12545 into,12570 into,9496 into {F55A8.2d},{F55A8.2b,F55A8.2e},{F55A8.2a.2},{F55A8.2a.1},{F55A8.2c} 2439 CB6871_redo IV 1889323 1 G A 255 1.06 63 62 0 20 20 @aAAaaaAAaAAaAAaAAaaa point 0 nongenic -12998 upstream {F55A8.1.1} 2440 CB6871_redo IV 1917013 1 A C 255 1.00 63 62 0 12 12 @CCccCccCCCCc point 0 SNP none {haw51958} 161481 CB6871_redo IV 1932506 88 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 8936 to 9024 bp into {F52C12.4} 161482 CB6871_redo IV 1951226 59 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3029 to 3088 bp into {F52C12.3} 2445 CB6871_redo IV 1971408 1 A G 106 1.00 63 62 1 6 7 @gggggg, point 0 nongenic,nongenic -2296 upstream,640 into {Y76B12C.3},{Y76B12C.4} 2453 CB6871_redo IV 2101656 1 C A 69 9.38 63 62 12 18 30 @A,..AAAaaAAAa..A..,A,AaaAA,,,a point 0 nongenic -1766 upstream {C23H5.11} 2454 CB6871_redo IV 2101657 1 A C 68 9.50 63 62 12 18 30 @..CCCccCCCc..C..,C,CccCC,,,cC. point 0 nongenic -1767 upstream {C23H5.11} 2455 CB6871_redo IV 2101873 1 G A 65 1.00 63 62 9 15 24 @A.a,a.A,aAa.,.aaaAa.,aaa point 0 nongenic -1983 upstream {C23H5.11} 2456 CB6871_redo IV 2106939 1 A C 102 2.19 63 62 0 6 6 @CCCCCC point 0 nongenic,nongenic -7049 upstream,2885 into {C23H5.11},{C23H5.7} 2457 CB6871_redo IV 2130505 1 A T 255 1.00 63 62 0 23 23 @TtttTTTTttttTtTtTtttttt point 0 SNP none {haw52294} 2458 CB6871_redo IV 2167751 1 A T 161 1.00 63 62 6 15 21 @t.tttt.TtTT,.TttT,TT. point 0 nongenic,nongenic -2881 upstream,-7853 upstream {C54E4.4},{C54E4.1} 2459 CB6871_redo IV 2170847 1 T G 26 1.00 63 62 3 12 15 @GGGGG,G,c,Gcccc point 0 nongenic,nongenic -4757 upstream,-5977 upstream {C54E4.1},{C54E4.4} 2463 CB6871_redo IV 2226862 1 T C 255 1.62 63 62 0 20 20 @CCcCcCCCCCcCccccCCCc point 0 nongenic,nongenic 4034 into,4036 into {T04C4.1a,T04C4.1b.2},{T04C4.1b.1} 2470 CB6871_redo IV 2258942 1 A T 24 1.06 63 62 13 14 27 @,,Tt,.T.ttT,.ttT,.,Tt.tt..t point 0 nongenic 4718 into {M70.4} 2472 CB6871_redo IV 2305595 1 C A 17 1.00 63 62 13 15 28 @,A.A,a.,AaAA,aA.a.,..,aAaAa. point 0 nongenic,nongenic -5244 upstream,945 into {C37F5.1},{Y38F2AL.2} 2473 CB6871_redo IV 2306330 1 G A 27 1.00 63 62 16 19 35 @.aA.a,..A..,aaA.a.Aa.Aa,A,,A.Aaa.aa point 0 nongenic,nongenic -5979 upstream,210 into {C37F5.1},{Y38F2AL.2} 2478 CB6871_redo IV 2357212 1 G T 170 1.00 63 62 0 7 7 @tTttttt point 0 SNP none {haw52736} 2479 CB6871_redo IV 2359440 1 A G 255 1.00 63 62 0 25 25 @GGGgGGGggGggGggGGGgGGgGGg point 0 SNP none {haw52752} 2483 CB6871_redo IV 2365375 1 A T 19 1.56 63 52 4 6 10 @.,..TTtttt point 0 nongenic,nongenic -13087 upstream,6446 into {Y38F2AR.13},{Y38F2AR.5} 2484 CB6871_redo IV 2373373 1 T C 255 2.44 63 62 0 23 23 @CccCcCcCcccccCcccccCCCC point 0 nongenic,nongenic -5089 upstream,2742 into {Y38F2AR.13},{Y38F2AR.5} 2487 CB6871_redo IV 2502956 1 A G 190 2.56 63 62 0 20 20 @GGGGGgGgggggGGGGGGGG point 0 nongenic,nongenic -1368 upstream,905 downstream {Y69A2AR.16},{Y69A2AR.17} 2491 CB6871_redo IV 2544993 1 A T 9 1.00 63 62 10 10 20 @tT,tT.t..T.,t,T...TT point 0 nongenic 2671 into {Y69A2AR.15} 2492 CB6871_redo IV 2553954 1 G A 61 1.00 63 62 13 16 29 @a,,A,A,a,Aaa.aA,a.A,.,AA,,Aaa point 0 missense GGC->GAC[Gly->Asp] {Y69A2AR.14} 2494 CB6871_redo IV 2666500 1 G A 47 1.00 63 62 11 14 25 @a,.a.aa.A.a.,.Aaaaa.AAA,, point 0 nongenic,nongenic,nongenic -1930 upstream,-546 upstream,-552 upstream {Y69A2AR.31},{Y69A2AR.1b,Y69A2AR.1d},{Y69A2AR.1a} 2497 CB6871_redo IV 2856999 1 C T 62 1.00 63 62 15 16 31 @,t,.TtT,,TTT,t..Tttt..TT..tt... point 0 nongenic 114 into {Y54G2A.16} 2503 CB6871_redo IV 2999123 1 A G 244 1.00 63 62 0 12 12 @gggGGggGgGgg point 0 silent CCT->CCC[Pro->Pro] {Y54G2A.27} 2505 CB6871_redo IV 3030954 1 G A 93 1.00 63 62 7 11 18 @,aAAA,Aa.a.AAa,.a. point 0 nongenic -2014 upstream {Y54G2A.29} 2509 CB6871_redo IV 3177823 1 A T 23 1.00 63 62 20 23 43 @,Tt,,.tt..,T..t.T,.,TTtTTT.tttTTT,..t.T,.tT point 0 nongenic -1711 upstream {Y67D8B.4} 2515 CB6871_redo IV 3209012 1 C A 173 3.06 63 62 26 43 69 @,a,Aaaa,AAa,,,Aa,aaaA,AAaAAAAA,A,aaaa,AA,aa,A,,,AaAaa,,a.A,aa,,aa.,,, point 0 SNP none {haw54198} 2522 CB6871_redo IV 3366820 1 T C 3 7.75 0 2 83 88 171 @,,...,GC,,CC.,CC,,....,,,,c.c,,C,.c.,,,c.,,.,,C,C...,,,,c,..,c,,,,.c.,,,,c...,,C,,,,,,C,,C,.c,cCc.C point 0 nongenic,nongenic -2372 upstream,744 downstream {Y55H10A.1},{Y55H10A.2} 2527 CB6871_redo IV 3370236 1 C T 255 1.00 63 62 0 30 30 @tTtTTtTTTTttTTTTTTttttTtTtttTT point 0 nongenic 1044 into {Y55H10A.1} 2528 CB6871_redo IV 3373705 1 C T 255 1.00 63 62 0 18 18 @TtTTTTTTTTtTTttTtt point 0 missense ATG->ATA[Met->Ile] {B0546.2.1,B0546.2.2} 2529 CB6871_redo IV 3396522 1 C T 255 1.00 63 62 0 34 34 @tTTtTTttTTtTtTttTtTtttttttTTTTTttt point 0 nongenic,nongenic 125 downstream,61 downstream {C04C3.5a,C04C3.5c},{C04C3.5b} 2530 CB6871_redo IV 3503233 1 C T 255 1.00 63 62 0 31 31 @tTTtTTttTttttTtTTtTTTTTTtTttTTT point 0 missense CCA->TCA[Pro->Ser] {C09G12.1} 2531 CB6871_redo IV 3525903 1 T A 213 1.00 63 62 0 16 16 @aaaaaaaaaaaaaaaa point 0 three_prime_UTR none {Y37E11C.1} 2532 CB6871_redo IV 3529034 1 C T 255 1.00 63 62 0 29 29 @TTTtttttTTttTTtttttTTtTtTTttt point 0 nongenic,nongenic,nongenic -4602 upstream,1685 into,1687 into {M57.1},{M57.2.1},{M57.2.2} 2536 CB6871_redo IV 3806324 1 A T 255 1.00 63 62 0 30 30 @TTtTTtTtttttTTtTTTtttTtTtTTTtT point 0 missense GAA->GTA[Glu->Val] {M02B7.1} 2537 CB6871_redo IV 3823638 1 T A 255 1.00 63 62 0 29 29 @AaAAAaAAAaaAAAaAAAAaaaaAAaAaa point 0 nongenic,nongenic -3228 upstream,-4319 upstream {F28F9.3},{M02B7.5} 2538 CB6871_redo IV 3864660 1 G C 41 1.00 63 12 0 4 4 @CCCC point 0 nongenic,nongenic -2566 upstream,365 into {F37C4.4b.2},{F28F9.4} 2539 CB6871_redo IV 3864661 1 A C 12 1.00 63 22 0 4 4 @CCCC point 0 nongenic,nongenic -2565 upstream,364 into {F37C4.4b.2},{F28F9.4} 161483 CB6871_redo IV 3889847 1123 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered codon 133 to codon 305 (26 % of 667 codons) {F37C4.1} 2543 CB6871_redo IV 4066059 1 C T 255 1.00 63 62 0 34 34 @TTtTTtTTTtTTTtTtttTtttTttTtTTtttTt point 0 silent CTC->CTT[Leu->Leu] {W03D2.10} 2544 CB6871_redo IV 4138859 1 C T 255 1.75 63 62 0 25 25 @TTtTTTTttTTTTtTTTTtTttTtt point 0 missense GGA->GAA[Gly->Glu] {F49F1.10} 2545 CB6871_redo IV 4151172 1 C T 255 1.38 63 62 0 30 30 @TttTtttTTtTTtTtttTtTttttTTtTtt point 0 silent TCC->TCT[Ser->Ser] {R07C12.4} 2546 CB6871_redo IV 4166340 1 A T 255 1.06 63 62 0 28 28 @tttTtTTttTTtTttttTttTtttTtTt point 0 nongenic,nongenic -1690 upstream,170 downstream {K08D10.5},{K08D10.7.1,K08D10.7.2} 2547 CB6871_redo IV 4185256 1 C T 211 2.94 63 62 6 30 36 @tttT.TT.T.TT.TTT.tTT,TTTTTTtttTTTTtt point 0 nongenic,nongenic,nongenic -3742 upstream,316 into,800 downstream {K06B9.2},{K08D10.11},{K08D10.1} 2554 CB6871_redo IV 4593005 1 T G 5 1.00 63 0 2 2 4 @gg,, point 0 nongenic -1042 upstream {F28E10.5} 2558 CB6871_redo IV 4821642 1 A G 28 1.00 63 62 4 5 9 @,..,GGGgg point 0 nongenic,nongenic -520 upstream,-577 upstream {H06H21.8a},{H06H21.8b} 2563 CB6871_redo IV 4931163 1 A C 255 1.00 63 62 0 33 33 @ccCccCCCCcccCCccCCCccccccCCCCCcCC point 0 missense,SNP AAC->CAC[Asn->His],none {Y9C9A.8},{haw56120,snp_Y9C9A[1]} 2564 CB6871_redo IV 4972666 1 C T 255 1.00 63 62 0 24 24 @TtTtTtTtTtTTttTttTTTtTTt point 0 missense,SNP GTT->ATT[Val->Ile],none {Y9C9A.15},{haw56128} 2570 CB6871_redo IV 5308471 1 A C 255 1.00 63 62 0 29 29 @CcCCCCCCCCCCCCccCCCccccccCcCC point 0 nongenic,nongenic -1751 upstream,-99 upstream {ZK354.3},{ZK354.9} 2571 CB6871_redo IV 5409613 1 C G 6 1.00 63 36 1 4 5 @GGGG. point 0 silent TCG->TCC[Ser->Ser] {ZK616.8} 2572 CB6871_redo IV 5426794 1 G T 255 1.00 63 62 0 19 19 @TtTtTTTttttttttTttt point 0 SNP none {haw56297} 2573 CB6871_redo IV 5516506 1 T C 8 1.00 63 62 1 3 4 @.ccc point 0 nongenic -253 upstream {B0273.4a,B0273.4b} 2578 CB6871_redo IV 5706865 1 C T 9 1.00 63 8 2 2 4 @Tt.. point 0 nongenic,nongenic -215 upstream,-3411 upstream {C55C3.2},{C55C3.5} 2579 CB6871_redo IV 5706866 1 T C 9 1.00 63 8 2 2 4 @Cc.. point 0 nongenic,nongenic -214 upstream,-3412 upstream {C55C3.2},{C55C3.5} 2583 CB6871_redo IV 6359857 1 A C 16 9.62 24 22 13 19 32 @CcC,CcCCCccc,Cc,cc,C,CC,,,,,.,.t point 0 nongenic,nongenic -12393 upstream,-2182 upstream {Y73B6BL.16},{Y73B6BL.47} 2602 CB6871_redo IV 7056612 1 A G 255 1.00 63 62 0 38 38 @GGGGGGgGgGGGGGGgGGGggGGgGGGGgGGGGgGggG point 0 SNP none {haw57660} 2612 CB6871_redo IV 7219277 1 T A 255 1.00 63 62 0 32 32 @AAAaaaaAAaaAAaaAaaaaAAaaaaAAaaAa point 0 nongenic,nongenic -546 upstream,192 into {R13A1.1},{R13A1.8} 2615 CB6871_redo IV 7527069 1 T G 255 1.00 63 62 0 31 31 @gGGGGgGGgGggGGGGGgGGggGGgGGGGgg point 0 SNP none {haw57987} 2618 CB6871_redo IV 7595318 1 T A 4 6.62 0 24 10 16 26 @.aA,AaA,aAa.aA.A,a...Aa.aA point 0 missense TTG->ATG[Leu->Met] {Y2C2A.1} 2621 CB6871_redo IV 7596411 1 A T 15 7.00 0 2 0 7 7 @ttttttt point 0 missense TAT->TTT[Tyr->Phe] {Y2C2A.1} 2622 CB6871_redo IV 7596465 1 T A 12 1.00 0 12 0 4 4 @aaaa point 0 nongenic,nongenic -9999 upstream,5921 into {F45E4.4},{Y2C2A.1} 2624 CB6871_redo IV 7596529 1 G C 57 1.00 28 56 0 7 7 @ccccccc point 0 nongenic,nongenic -9935 upstream,5985 into {F45E4.4},{Y2C2A.1} 2625 CB6871_redo IV 7596545 1 T A 57 1.00 28 56 0 7 7 @aaaaaaa point 0 nongenic,nongenic -9919 upstream,6001 into {F45E4.4},{Y2C2A.1} 161485 CB6871_redo IV 7596571 56 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 6026 to 6082 bp into {Y2C2A.1} 2627 CB6871_redo IV 7597178 1 T A 14 5.75 0 14 0 4 4 @AAAa point 0 nongenic,nongenic -9286 upstream,6634 into {F45E4.4},{Y2C2A.1} 2630 CB6871_redo IV 7597755 1 T A 87 8.19 31 62 8 8 16 @....,.,aaaaaa.aa point 0 missense TTG->ATG[Leu->Met] {Y2C2A.1} 161486 CB6871_redo IV 7598923 66 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered codon 2626 to codon 2629 (0 % of 4901 codons) {Y2C2A.1} 2633 CB6871_redo IV 7599679 1 A G 151 7.69 63 62 6 8 14 @...GGGG.GG..GG point 0 missense,SNP ACT->GCT[Thr->Ala],none {Y2C2A.1},{uCE4-1006} 2635 CB6871_redo IV 7600485 1 A T 255 1.00 63 62 0 32 32 @TtttTTttTtTTTtTTTtttTtTTTTttTTtt point 0 missense,SNP CAA->CAT[Gln->His],none {Y2C2A.1},{haw58035} 2636 CB6871_redo IV 7607350 1 A G 195 2.31 63 62 0 17 17 @GGGgGgGggGgGgGGGG point 0 nongenic,nongenic -12263 upstream,886 into {F45E4.3b.1},{F45E4.4} 2637 CB6871_redo IV 7607351 1 A G 202 2.31 63 62 0 17 17 @GGGgGgGggGgGgGGGG point 0 nongenic,nongenic -12262 upstream,887 into {F45E4.3b.1},{F45E4.4} 2638 CB6871_redo IV 7607353 1 A G 201 2.31 63 62 0 17 17 @GGGgGgGggGgGgGGGG point 0 nongenic,nongenic -12260 upstream,889 into {F45E4.3b.1},{F45E4.4} 2640 CB6871_redo IV 8007299 1 A G 23 1.00 63 58 2 4 6 @.,GgGG point 0 nongenic -3194 upstream {Y42H9B.2} 2641 CB6871_redo IV 8012779 1 C A 63 1.00 63 60 0 5 5 @aaaaa point 0 nongenic,nongenic -1330 upstream,-366 upstream {C26B2.8},{Y42H9B.3} 2647 CB6871_redo IV 8468403 1 C T 255 3.69 63 62 0 19 19 @TTTTTTtttTtTTtttttt point 0 nongenic,nongenic,nongenic,nongenic -5677 upstream,-8143 upstream,3570 into,3654 into {C28C12.11b},{T01B11.4},{T01B11.7.2},{T01B11.7.1} 2663 CB6871_redo IV 8566666 1 A C 125 7.06 63 62 0 14 14 @CCCCCCCCCCCCCC point 0 nongenic,nongenic -2086 upstream,-498 upstream {Y59H11AM.3},{Y59H11AM.2} 2664 CB6871_redo IV 8566667 1 G C 130 7.06 63 62 0 14 14 @CCCCCCCCCCCCCC point 0 nongenic,nongenic -2087 upstream,-497 upstream {Y59H11AM.3},{Y59H11AM.2} 2705 CB6871_redo IV 8575147 1 A C 16 6.75 29 12 2 75 77 @C.CCccCCCCCcCCcccCcCcccCCCCCccCCCcccccCccCcCCcCCCCCCcCCCcCCCCcccC,CCcccccccCC point 0 nongenic -10376 upstream {Y59H11AR.2a.2} 2726 CB6871_redo IV 8602902 1 C A 255 1.00 63 62 0 24 24 @aaaaaaaaaAAAAaAAAAAAAaaA point 0 SNP none {haw58423} 2727 CB6871_redo IV 8602934 1 C A 255 1.00 63 62 0 26 26 @AAAAAAAaaAAAAaAaAaAaaaaAaA point 0 SNP none {haw58424} 2729 CB6871_redo IV 8894794 1 A C 95 4.69 63 62 7 12 19 @,cccCC.CccC..c,c.c. point 0 nongenic,nongenic -6832 upstream,707 into {C27B7.5},{C27B7.4} 2730 CB6871_redo IV 8966631 1 G A 31 1.00 63 30 1 5 6 @AAAAA. point 0 nongenic,nongenic -1638 upstream,518 into {C53B4.1},{C53B4.2} 2731 CB6871_redo IV 8966632 1 T G 30 1.00 63 30 2 3 5 @GGG.. point 0 nongenic,nongenic -1637 upstream,519 into {C53B4.1},{C53B4.2} 2732 CB6871_redo IV 9038439 1 G A 255 1.00 63 62 0 26 26 @AaaaaaAAAaAaaaaAaAaAAAAAAa point 0 SNP none {haw58542} 2736 CB6871_redo IV 9048306 1 A G 255 5.06 63 62 25 230 255 @GGGGGGGGGGgggggggggggGGGggggGGGGGGGGGGGGGGggggGGGGGGGGGGGGGGGGGGGGGGGGgggggGGGGGGGGGGGGGGGGGGGGGGGG point 0 SNP none {haw58549} 2738 CB6871_redo IV 9048807 1 C G 199 2.12 63 62 0 15 15 @GggGGgGagggGgag point 0 nongenic,nongenic -21182 upstream,-3474 upstream {ZC410.1a},{Y73F4A.1} 2739 CB6871_redo IV 9048812 1 T A 185 1.00 63 62 0 14 14 @AAaAgaaaAaggAA point 0 nongenic,nongenic -21177 upstream,-3479 upstream {ZC410.1a},{Y73F4A.1} 2742 CB6871_redo IV 9155021 1 A T 140 1.00 63 62 0 6 6 @TtTTTT point 0 SNP none {haw58572} 2745 CB6871_redo IV 9269038 1 T C 255 1.00 63 62 0 38 38 @cccCcccCccccccCcCCCcccCccCCCcccCccccCC point 0 nongenic,nongenic -1035 upstream,-2498 upstream {Y11D7A.13},{Y11D7A.19} 2755 CB6871_redo IV 9717381 1 C T 14 1.00 63 26 2 3 5 @,,ttt point 0 nongenic -7844 upstream {C28D4.9} 2756 CB6871_redo IV 9745669 1 G A 255 1.31 63 62 0 31 31 @aAaaaAAaAaaaaAAaaaAAaaAaAaAaAaa point 0 missense CAC->TAC[His->Tyr] {C28D4.5} 5205 CB6871_redo IV 10112497 3 X X -1000 -999.99 -1000 -1000 9 -6 3 @,,.,,,,.. indel -3 SNP none {uCE4-1092} 2771 CB6871_redo IV 10329615 1 G T 104 1.00 63 34 2 7 9 @TTtTTtT.. point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -8491 upstream,1245 into,136 into,1500 into,1518 into,1944 into,2185 into,464 into,4649 into,5375 into,559 into {R09E10.1.2},{K11E8.1i.1},{K11E8.1n},{K11E8.1m},{K11E8.1o},{K11E8.1k.2},{K11E8.1a},{K11E8.1l.2},{K11E8.1c.1,K11E8.1c.2,K11E8.1d.2,K11E8.1e.1,K11E8.1e.2,K11E8.1f.1,K11E8.1f.2,K11E8.1g.1,K11E8.1g.2,K11E8.1h.1,K11E8.1h.2,K11E8.1p},{K11E8.1d.1,K11E8.1k.1,K11E8.1l.1},{K11E8.1i.2} 2772 CB6871_redo IV 10409489 1 C A 62 1.00 63 62 4 5 9 @aAAaa..,. point 0 nongenic,nongenic,nongenic -39 upstream,468 downstream,540 downstream {R10H10.6},{R10H10.7.1},{R10H10.7.2} 2775 CB6871_redo IV 10878679 1 G A 255 1.00 63 62 0 31 31 @AaAAAaAaAAAaAAaAaAAAAAaAAAAaaaa point 0 missense,SNP CGT->TGT[Arg->Cys],none {F13E9.6},{haw59179} 2776 CB6871_redo IV 10943769 1 A G 4 9.00 63 62 16 239 255 @GGGGGggtGGGGgggGGGGggGGGG,gggggGgGG,gggggGGGG,GGGGggggggggggGGGGGGGgggggggGGGGGGGGgggggggggggggggGG point 0 nongenic 931 downstream {ZK593.9} 2778 CB6871_redo IV 10950096 1 A T 56 1.00 63 62 31 45 76 @ttTt.ttTTt,TTTT..T.T,ttttt,tt,TTTttttT.,Ttt.TtttTt..,T,.t.tT,...T.t,.,.,.,.. point 0 silent GTA->GTT[Val->Val] {Y69E1A.2} 2779 CB6871_redo IV 10950263 1 A C 71 1.38 63 62 32 59 91 @ccC,Ccc.CC,ccCC.cc,,,c,cccCCCc.c.cCccCC.Cc,.ccc.cCcCC.,ccCC,CCcc.,cc,c,C,C.cCCCC.c.,C..,... point 0 missense,SNP AAG->ACG[Lys->Thr],none {Y69E1A.2},{uCE4-1129} 2780 CB6871_redo IV 10950264 1 G A 69 1.31 63 62 32 57 89 @A,Aaa.AA,aaAA.aa,,,a,aaaAAAa.a.aAaaAA.Aa,.aaa.aAaAA.,aaAA,AAaa.,aa,a,A,A.aAAAA.a.,A..,... point 0 silent,SNP AAG->AAA[Lys->Lys],none {Y69E1A.2},{uCE4-1130} 2781 CB6871_redo IV 10950402 1 G A 29 1.00 63 62 37 52 89 @.AAAA.a.AA.A...AA.A..a,.,,AaAAAAaaa.,.a.a,A.AA.,A.aAA,,A.,.,AAAaAaA,Aa.AAAa.A,,CaaA,Aa,.a point 0 silent,SNP GGG->GGA[Gly->Gly],none {Y69E1A.2},{uCE4-1131} 2782 CB6871_redo IV 10950911 1 A G 34 1.00 63 62 39 59 98 @G,G.gGGg.gGGgg.G,.g.g,.,Ggggg,Ggg.GGG,.G,gGg,g.,ggGgg,Gg,.gg..,,gGGGggggg.gG..,,g,,GGg..Gg,g.g,g,. point 0 silent GCA->GCG[Ala->Ala] {Y69E1A.2} 2783 CB6871_redo IV 10984634 1 T C 7 1.00 63 62 33 33 66 @Cc,,cc.CCCcCc.c,..cc,c..C..,.cC.C.ccc.C,.,cCCc..,c..,C...C.,.C,cCc point 0 three_prime_UTR none {Y43E12A.2} 2785 CB6871_redo IV 10997632 1 G C 3 5.50 0 2 1 3 4 @.cCc point 0 nongenic -4456 upstream {F13H10.9} 2788 CB6871_redo IV 11002683 1 T C 26 5.94 63 62 8 8 16 @.,,.,..,CCCccCCC point 0 nongenic,nongenic -1871 upstream,595 into {F13H10.1},{F13H10.9} 2789 CB6871_redo IV 11009137 1 G A 255 1.00 63 62 0 27 27 @AAaaAaaAaaAAaaaAAaaAaaaaAAA point 0 nongenic,nongenic -126 upstream,862 downstream {F13H10.6},{F13H10.2a} 2792 CB6871_redo IV 11071114 1 C T 82 3.19 63 62 383 -128 255 @TTT,TTT,T,TTTTTTT,T,T.t.t.,TTTT,TTTTTTTTTTT,TTt.tt..ttTT,T,TT,TT,TTT,TTTT,TTTT,TTTTTTTTT.tt...t.tTT point 0 nongenic 884 downstream {Y5F2A.3} 2793 CB6871_redo IV 11071123 1 T C 255 1.12 63 62 3 252 255 @CCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccC point 0 SNP none {haw59203} 2794 CB6871_redo IV 11071124 1 T A 93 1.12 63 62 228 27 255 @,,,A,,,,,,,,,,,,,,,,,,,,,,,,,,,.....,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,.....,,,,,,,,,,,,,,,,,A,,,, point 0 nongenic 894 downstream {Y5F2A.3} 5211 CB6871_redo IV 11075254 0 X X -1000 -999.99 -1000 -1000 19 -3 16 @,,.,C,,,,,C,,,,,,,cccccccccccc... indel 1 nongenic 813 downstream {Y5F2A.4} 2816 CB6871_redo IV 11144955 1 G T 29 1.44 63 62 23 29 52 @,,tt,tttt..TtTT.T,.t,,Ttt.t..tt.ttTt..tt.t,t.t.t,,t. point 0 missense AGA->ATA[Arg->Ile] {F01G4.4} 2820 CB6871_redo IV 11180495 1 A G 255 1.00 63 62 0 33 33 @gGGggggggGGgggGGgggGGggGggGGGgGGG point 0 missense,SNP ATT->GTT[Ile->Val],none {R07H5.2a.1,R07H5.2a.2,R07H5.2b},{haw59219} 2822 CB6871_redo IV 11226241 1 A C 137 2.50 63 62 0 10 10 @ccCCcccccC point 0 missense CAA->CCA[Gln->Pro] {C29F4.1} 2830 CB6871_redo IV 12048852 1 A G 125 0.00 63 62 0 6 6 @GGGGGG point 0 nongenic,nongenic,nongenic -1971 upstream,615 into,979 downstream {T12G3.2b.2},{T12G3.4},{T12G3.8} 2831 CB6871_redo IV 12048854 1 A G 137 1.00 63 62 0 7 7 @GGGGGGG point 0 nongenic,nongenic,nongenic -1973 upstream,617 into,977 downstream {T12G3.2b.2},{T12G3.4},{T12G3.8} 2832 CB6871_redo IV 12069459 1 G A 255 1.00 63 62 0 28 28 @aaAAaaaAAAaaAaaAAaAaaaaaAaAa point 0 SNP none {haw59564} 2833 CB6871_redo IV 12105545 1 A T 255 1.00 63 62 0 42 42 @TTTTTtTtTTtTTtTTTTtTTTtTTTttttTTtttTTttTtT point 0 three_prime_UTR none {F11A10.4} 2834 CB6871_redo IV 12138205 1 T C 180 4.75 63 62 0 8 8 @CCCCCCCC point 0 nongenic,nongenic,nongenic -888 upstream,623 downstream,785 downstream {B0001.4},{B0001.8.1},{B0001.8.2,B0001.8.3} 2839 CB6871_redo IV 12239969 1 A C 105 1.75 63 62 0 5 5 @CCCCC point 0 nongenic -1048 upstream {Y39C12A.6} 2840 CB6871_redo IV 12248644 1 A G 19 4.38 0 16 0 13 13 @GgGGGGGGGGGGG point 0 nongenic -3876 upstream {Y39C12A.7} 5216 CB6871_redo IV 12318975 5 X X -1000 -999.99 -1000 -1000 43 -39 4 @,,,,,.,,,,,,,,,,,.,,,,,,,g..,,,,,,,.,,,,,,C.. indel -5 nongenic,nongenic -7399 upstream,-8349 upstream {K09E10.2},{F19B6.3} 2851 CB6871_redo IV 12334254 1 C A 255 1.00 63 62 0 30 30 @AAaAAaAAAAaaAaAAaAAaaaaAAaAAAa point 0 nongenic,nongenic,nongenic -3294 upstream,-3393 upstream,316 into {F19B6.4},{F19B6.2a},{F19B6.1a,F19B6.1b} 2852 CB6871_redo IV 12334255 1 C A 255 1.00 63 62 0 31 31 @AAaAAaAAAAaaAaAAaAAaaaaAAaAAAaa point 0 nongenic,nongenic,nongenic -3293 upstream,-3394 upstream,315 into {F19B6.4},{F19B6.2a},{F19B6.1a,F19B6.1b} 5218 CB6871_redo IV 12336928 0 X X -1000 -999.99 -1000 -1000 6 -4 2 @,,,...Gg indel 0 nongenic,nongenic -2358 upstream,-621 upstream {F19B6.1a,F19B6.1b},{F19B6.4} 2853 CB6871_redo IV 12336929 1 A T 29 1.00 63 62 2 6 8 @TTTttt,. point 0 SNP none {snp_F19B6[2]} 2854 CB6871_redo IV 12341156 1 C T 30 1.00 63 28 5 8 13 @Tttttttt..... point 0 nongenic,nongenic -8756 upstream,769 downstream {ZC518.1a,ZC518.1b,ZC518.1c},{F19B6.4} 2855 CB6871_redo IV 12341157 1 T C 28 1.00 63 30 5 7 12 @ccccccc..... point 0 nongenic,nongenic -8755 upstream,770 downstream {ZC518.1a,ZC518.1b,ZC518.1c},{F19B6.4} 2859 CB6871_redo IV 12393525 1 C A 255 1.00 63 62 0 38 38 @AaAAAAAAaaAAAAaAaAAAaaAaAAaAAAAAAAaaaa point 0 missense,SNP ATG->ATT[Met->Ile],none {F28D1.9},{haw59770} 2860 CB6871_redo IV 12430402 1 A T 214 10.00 63 62 0 17 17 @ttttttttttttttttt point 0 nongenic,nongenic,nongenic,nongenic -1917 upstream,-2205 upstream,2078 into,2091 into {F08G5.4},{F08G5.7},{F08G5.5.2},{F08G5.5.1} 2863 CB6871_redo IV 12430533 1 C T 255 5.31 63 62 0 18 18 @tTtTttttttttTTtttT point 0 nongenic,nongenic,nongenic,nongenic -2048 upstream,-2074 upstream,1947 into,1960 into {F08G5.4},{F08G5.7},{F08G5.5.2},{F08G5.5.1} 2868 CB6871_redo IV 12433585 1 T G 60 1.00 63 62 0 6 6 @AaAGgG point 0 nongenic,nongenic -2210 upstream,978 into {F08G5.6},{F08G5.7} 2872 CB6871_redo IV 12545902 1 C T 255 1.00 63 62 0 34 34 @TTTTtttttTtTTTtTTTtttttTTTTtTtTttT point 0 SNP none {haw59832} 2873 CB6871_redo IV 12571922 1 A G 9 1.00 63 50 2 2 4 @,,Gg point 0 nongenic,nongenic -1415 upstream,-731 upstream {K08E7.5c},{K08E7.4} 2874 CB6871_redo IV 12581671 1 C T 255 1.00 63 62 0 25 25 @tttTttTtttTTttTtttTttttTt point 0 SNP none {haw59843} 2875 CB6871_redo IV 12599665 1 T A 80 1.00 63 0 0 4 4 @aaaa point 0 nongenic -526 upstream {K08E7.9} 2877 CB6871_redo IV 12600008 1 C G 255 1.00 63 62 0 32 32 @GGGgggGGgGGGggggGGGgggggGgGgGggg point 0 nongenic -869 upstream {K08E7.9} 2880 CB6871_redo IV 12697437 1 G C 255 1.00 63 62 0 36 36 @cCccCcCcCcccCCCCCccccCcCCCCcCcCCcCcC point 0 SNP none {haw59886} 2881 CB6871_redo IV 12730473 1 A G 199 1.00 63 62 0 7 7 @GggGGGG point 0 SNP none {haw59889} 2885 CB6871_redo IV 12781072 1 A C 179 1.00 63 62 0 15 15 @CCCCCCCCCCCCCgg point 0 nongenic,nongenic,nongenic -23429 upstream,-7953 upstream,5870 into {C36H8.3.1},{F07C6.3},{ZK897.1} 2886 CB6871_redo IV 12928271 1 A C 3 3.81 63 2 1 4 5 @CCCC, point 0 nongenic,nongenic -1566 upstream,-2403 upstream {C32H11.6},{C32H11.7a} 2887 CB6871_redo IV 12928272 1 A C 3 3.81 63 2 1 4 5 @CCCC, point 0 nongenic,nongenic -1567 upstream,-2402 upstream {C32H11.6},{C32H11.7a} 2888 CB6871_redo IV 12979116 1 T C 255 1.00 63 62 0 40 40 @CCCCCcCcccCccccCCCCcCCCCcCCCCcCccCcCCCcC point 0 SNP none {haw60243} 2889 CB6871_redo IV 13092702 1 G C 255 1.00 63 62 0 30 30 @CcCCcCcCCccCCccCCcCCcCcCccCccc point 0 nongenic,nongenic,nongenic -1272 upstream,-1666 upstream,1111 into {C39E9.12.1,C39E9.12.2},{C39E9.9},{C39E9.11} 2892 CB6871_redo IV 13127459 1 T C 255 1.00 63 62 0 31 31 @CCcccccCcCccCcCCCccCCcCcCCCCCcC point 0 SNP none {haw60403} 5227 CB6871_redo IV 13188308 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @,...GG indel 0 nongenic -1426 upstream {F58D2.2} 2894 CB6871_redo IV 13451972 1 T C 255 1.00 63 62 0 28 28 @cCcCCcCCCcCcCCCcCccCcCCCCcCc point 0 SNP none {haw60794} 2895 CB6871_redo IV 13460709 1 G A 5 1.31 63 62 2 2 4 @,.AA point 0 nongenic -5396 upstream {Y38H8A.5} 2896 CB6871_redo IV 13463712 1 G C 12 1.00 63 0 0 4 4 @CCCC point 0 nongenic -2393 upstream {Y38H8A.5} 2898 CB6871_redo IV 13463717 1 T C 3 4.19 63 0 1 5 6 @CCCC,g point 0 nongenic -2388 upstream {Y38H8A.5} 2905 CB6871_redo IV 13549411 1 T A 130 3.12 63 62 27 228 255 @,.,,..,,.,....,.,AAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAA point 0 nongenic,nongenic,nongenic -1211 upstream,209 downstream,317 downstream {F52G2.3.1},{Y45F10B.13b},{Y45F10B.13a,Y45F10B.13c} 2907 CB6871_redo IV 13563245 1 G C 255 1.00 63 62 0 38 38 @CCccCCCCCCccCccCcccCCCCccCcCccCccCCCcc point 0 SNP none {haw60948} 2908 CB6871_redo IV 13563393 1 G T 255 1.00 63 62 0 34 34 @TttTtTttTtTttTtttTTtttttTttTtttttt point 0 SNP none {haw60949} 2910 CB6871_redo IV 13602476 1 T A 255 1.00 63 62 0 18 18 @AaAaaAaaaGaAaAAAaa point 0 SNP none {haw60978} 2911 CB6871_redo IV 13662115 1 T G 255 1.00 63 62 0 44 44 @ggGggGGGgGgGGGgGgGggGgGggGgGgGGGggggggGggGgG point 0 SNP,three_prime_UTR none,none {haw61075},{Y45F10C.2} 2913 CB6871_redo IV 13695677 1 C G 255 1.00 63 62 0 23 23 @GGGGggGgGggGGGgggGggggg point 0 nongenic -6914 upstream {T23G4.2} 2914 CB6871_redo IV 13695678 1 G C 255 1.00 63 62 0 23 23 @CCCCccCcCccCCCcccCccccc point 0 nongenic -6915 upstream {T23G4.2} 2921 CB6871_redo IV 13783664 1 T C 48 1.00 63 36 1 4 5 @CccC, point 0 nongenic,nongenic,nongenic -261 upstream,-645 upstream,1255 into {Y45F10D.4},{Y45F10D.11b},{Y45F10D.11a} 2925 CB6871_redo IV 13793476 1 A C 212 1.00 63 62 0 7 7 @cCcccCC point 0 nongenic,nongenic -4787 upstream,2715 into {Y45F10D.9},{Y45F10D.7} 2929 CB6871_redo IV 13838595 1 G A 255 1.00 63 62 0 23 23 @AAaaaAaAAAAAAaAAaaaAaAA point 0 nongenic,nongenic,nongenic,nongenic -15726 upstream,-2237 upstream,6085 into,6351 into {B0513.6},{H08M01.1},{H08M01.2a},{H08M01.2b} 2934 CB6871_redo IV 14347514 1 C A 255 1.00 63 62 0 23 23 @aaaaaaAaaAaAAaAaaaaAAaA point 0 SNP none {haw62226} 2939 CB6871_redo IV 14691766 1 G A 255 1.00 63 62 0 31 31 @aaaAaAaAAAaAAAAAaaaaAaAAaaaAAAa point 0 SNP none {haw62984} 2946 CB6871_redo IV 14992694 1 G T 255 1.00 63 62 0 26 26 @tTTTtTTttTttttttTTTTtTTtTt point 0 SNP none {haw63537} 2947 CB6871_redo IV 14998777 1 C T 255 1.00 63 62 0 29 29 @tTTtTTTTTTTtTtTTTTTTTtTTTTTTt point 0 SNP none {haw63554} 2959 CB6871_redo IV 15077941 1 T A 3 1.50 60 18 3 3 6 @..,aaa point 0 nongenic -9056 upstream {Y41E3.15} 2973 CB6871_redo IV 15223712 1 T A 210 1.12 63 62 0 25 25 @aAaaaaaaaaaAaaaAaaaAaaAAa point 0 nongenic -3405 upstream {Y40H7A.11} 2974 CB6871_redo IV 15223715 1 C T 182 1.06 63 62 0 23 23 @tttttttttTtttTtttTttTTt point 0 nongenic -3408 upstream {Y40H7A.11} 2976 CB6871_redo IV 15313323 1 A T 255 1.00 63 62 0 22 22 @tttTTtttTtTttttTtTTtTT point 0 SNP none {haw64171} 2977 CB6871_redo IV 15373564 1 C G 3 7.00 63 14 1 4 5 @ggg,g point 0 nongenic -4859 upstream {Y73F8A.20} 2981 CB6871_redo IV 15456966 1 A T 255 1.00 63 62 0 19 19 @tTtttttTTttTtTttTTT point 0 nongenic,nongenic -3818 upstream,1853 into {Y73F8A.24},{Y73F8A.25b} 2983 CB6871_redo IV 15591618 1 G C 131 3.50 63 62 2 16 18 @ccCC.CCcCcCCcCc.Cc point 0 silent TCG->TCC[Ser->Ser] {Y105C5A.4} 2988 CB6871_redo IV 15749705 1 A G 255 1.00 63 62 0 28 28 @GGgGGGGgGGGGtGgGGGGGGgggGGgG point 0 SNP none {haw64925} 2996 CB6871_redo IV 15798018 1 T G 69 1.31 63 10 0 6 6 @GgGGgg point 0 nongenic 62 downstream {Y105C5A.22} 2997 CB6871_redo IV 15798020 1 C G 10 1.81 63 46 2 3 5 @GGg., point 0 nongenic 60 downstream {Y105C5A.22} 2999 CB6871_redo IV 15871052 1 T G 255 1.00 63 62 0 28 28 @gggGggGgGGGgGggGGGgggggGgggg point 0 missense,SNP TTG->TGG[Leu->Trp],none {Y105C5B.1},{haw65169} 3002 CB6871_redo IV 15925394 1 A T 255 1.00 63 62 0 19 19 @tTTTtTtTTTtTtTtTttt point 0 SNP none {haw65323} 3003 CB6871_redo IV 15935820 1 T C 255 1.00 63 62 0 29 29 @cCccCCCCCccCCCccCCcCCCccCCcCC point 0 SNP none {haw65337} 3005 CB6871_redo IV 16035982 1 A T 255 1.00 63 62 0 23 23 @tTttTtTTTtTTtTTtttTtTtT point 0 SNP none {haw65589} 3006 CB6871_redo IV 16085619 1 C A 255 1.00 63 62 0 19 19 @AaaAaaaAaaAAaaaAAaa point 0 SNP none {haw65640} 3009 CB6871_redo IV 16199503 1 T C 255 1.00 63 62 0 39 39 @CccCCCcCCCcCCCcCccCccCccCCCCccCCccCCcCC point 0 silent CTT->CTC[Leu->Leu] {Y7A9A.1} 3011 CB6871_redo IV 16244782 1 A G 3 3.75 0 18 4 5 9 @g.g,,g.gg point 0 nongenic,nongenic -4130 upstream,-6167 upstream {F38C2.1},{H25K10.7} 3020 CB6871_redo IV 16426595 1 A T 187 1.00 63 4 0 6 6 @TtTTtt point 0 nongenic,nongenic -5594 upstream,1987 into {Y10G11A.2a},{Y10G11A.1} 3033 CB6871_redo IV 16469153 1 A C 18 1.00 63 6 0 4 4 @cccc point 0 nongenic,nongenic -149 upstream,384 downstream {VY10G11R.2},{VY10G11R.1} 3034 CB6871_redo IV 16503848 1 C A 255 1.00 63 62 0 30 30 @AaAaAaaaaAaAaaaaAaAaAaaAaAaaAa point 0 nongenic,nongenic -9379 upstream,568 into {Y51H4A.2},{Y51H4A.4} 3037 CB6871_redo IV 16533636 1 T A 255 1.06 63 62 1 30 31 @aAAAaaAAAaAAaaAAaAAaAAAAaaA,aaa point 0 missense,SNP TTT->TTA[Phe->Leu],none {Y51H4A.6},{haw66558} 3043 CB6871_redo IV 16586851 1 A G 5 3.69 63 0 1 6 7 @.GGgggg point 0 nongenic -8346 upstream {Y51H4A.8} 3045 CB6871_redo IV 16586856 1 C G 17 1.25 63 2 3 6 9 @,,.gggggg point 0 nongenic -8351 upstream {Y51H4A.8} 3048 CB6871_redo IV 16615932 1 C G 12 1.00 63 0 0 4 4 @gggg point 0 nongenic,nongenic -10253 upstream,-13197 upstream {Y51H4A.10},{Y51H4A.9} 3049 CB6871_redo IV 16615935 1 A G 12 1.00 63 2 0 4 4 @gggg point 0 nongenic,nongenic -10250 upstream,-13200 upstream {Y51H4A.10},{Y51H4A.9} 3051 CB6871_redo IV 16619779 1 T A 55 1.00 63 62 2 5 7 @AaAAA,. point 0 nongenic,nongenic -17044 upstream,-6406 upstream {Y51H4A.9},{Y51H4A.10} 3052 CB6871_redo IV 16619813 1 C G 255 1.00 63 62 0 26 26 @GgGggGGgGGgggggggGGGgGGgGg point 0 SNP none {haw66710,snp_Y51H4A[11]} 3060 CB6871_redo IV 16760578 1 C T 255 1.25 63 62 0 47 47 @ttttttTtttTTTTTttttTTttttTTTTTTTTttTtTttTTtTtTT point 0 SNP none {haw66850} 3061 CB6871_redo IV 16786381 1 G T 255 1.00 63 62 0 24 24 @tTtTttTTtTTTTTTTTTtTtTTT point 0 SNP none {haw66890} 3062 CB6871_redo IV 16848870 1 A C 255 3.06 63 62 0 15 15 @ccCCCccCCcccCCC point 0 nongenic,nongenic,nongenic 1084 into,430 into,704 into {Y116A8A.9.2},{Y116A8A.9.3},{Y116A8A.9.1} 3068 CB6871_redo IV 16939349 1 T G 255 1.00 63 62 0 29 29 @ggggggGggGGGgGggGggggGGggGGGg point 0 SNP none {haw67104} 3069 CB6871_redo IV 16945230 1 A G 231 1.94 63 62 10 54 64 @GGGGGGG.g.gGGGgggGGGGg,,ggGGG.gGGggGg.GGgGg.GGggGGGG.GgggGggGG.. point 0 nongenic,nongenic,nongenic -1854 upstream,-6161 upstream,1583 into {Y116A8C.12.1,Y116A8C.12.2},{Y116A8C.10b.2},{Y116A8C.9} 3071 CB6871_redo IV 17086649 1 T C 255 1.00 63 62 0 26 26 @cCCccCCcccCcCcCCcccccCcCcc point 0 missense CAT->CGT[His->Arg] {Y116A8C.26a} 3076 CB6871_redo IV 17446286 1 A T 255 1.00 63 62 0 27 27 @ttTTTtTttTttTtttttttttTtTtt point 0 nongenic,nongenic 1083 into,1796 into {F11E6.8b},{F11E6.8a} 3077 CB6871_redo IV 17491300 1 G A 255 1.00 63 62 0 44 44 @AAAaAaAAaAAaaaaaAAaaAAaAaAaAaAaaAAAaaaaaaaaa point 0 SNP none {haw67744} 3078 CB6871_redo IV 17491319 1 C T 255 1.00 63 62 0 47 47 @TtTtTtTttTTTtttttttttTtTttttTttTTttttTTttTTtTtT point 0 SNP none {haw67745} 3079 CB6871_redo IV 17492346 1 G A 80 3.50 63 54 2 4 6 @aaaa,, point 0 nongenic -1893 upstream {4R79.1a} 3080 CB6871_redo IV 17492347 1 G A 55 2.69 63 62 2 5 7 @aaaaA,, point 0 nongenic -1894 upstream {4R79.1a} 4749 CB6871_redo MtDNA 8429 1 A G 255 1.00 63 62 0 255 255 @GGGGGGGggggggggGGGGGGGGGGGGGGGGGGGGgggggggggggggggGGGGGGGGGGGGgggggGGGGGGGGGGGGggggggggggggggGGGGGG point 0 silent,three_prime_UTR GTA->GTG[Val->Val],none {MTCE.26},{MTCE.25} 4750 CB6871_redo MtDNA 12998 1 C T 255 1.00 63 62 0 255 255 @TTtttttTTtttttTTTTTtttttTTTTTttttttttTTTTTTttttttTTGttttttttttttTTtttttttttttttTTttttttttttttttTTtt point 0 silent,three_prime_UTR GGC->GGT[Gly->Gly],none {MTCE.35},{MTCE.34} 3082 CB6871_redo V 705 1 C T 255 1.75 63 62 0 26 26 @TTTttTTTTTTttTtTTttttTttTt point 0 nongenic -774 upstream {cTel3X.1} 3083 CB6871_redo V 721 1 C G 255 1.56 63 62 0 32 32 @GGGGggGgGGggggGggGggGGGggGGgGGGG point 0 nongenic -758 upstream {cTel3X.1} 3084 CB6871_redo V 46068 1 G C 91 1.00 63 62 0 6 6 @CccCcC point 0 nongenic,nongenic -2853 upstream,602 into {B0348.1},{B0348.2} 3085 CB6871_redo V 46069 1 T G 89 1.00 63 62 0 6 6 @ggGgGG point 0 nongenic,nongenic -2852 upstream,603 into {B0348.1},{B0348.2} 3086 CB6871_redo V 46079 1 C A 156 1.00 63 62 0 6 6 @aAAAaA point 0 nongenic,nongenic -2842 upstream,613 into {B0348.1},{B0348.2} 3087 CB6871_redo V 46135 1 C G 255 1.00 63 62 0 28 28 @GGGGGGgGGGGGgGGgggGgGAgGGggG point 0 SNP none {haw67774} 3088 CB6871_redo V 198833 1 A T 255 1.00 63 62 0 27 27 @TtTTtttTtTttTTtTTTTTTTTtTtT point 0 nongenic,nongenic -3894 upstream,1855 into {DC2.8},{Y108G3AL.7} 3089 CB6871_redo V 265179 1 C A 255 4.00 63 62 1 254 255 @AaaaaaaaAAAAaaaaAaaaaaaaaaaaaAaaaaaaaaaAAaaaaaAAaaaaaaAAaaaaaaaaaaaaaaAAAaaaaaaaaAAANAAaaAAAAAAaaaa point 0 nongenic,nongenic -3127 upstream,-7197 upstream {Y58G8A.1},{R02C2.4} 3090 CB6871_redo V 265207 1 C A 255 1.31 63 62 0 255 255 @AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAaaaAAAAAAAAAAAAaaaaAAAAAAAAAAAAAAAAAAaaaaaAAAAAAAAAAAAAA point 0 SNP none {haw67964} 3091 CB6871_redo V 265223 1 T C 255 3.12 63 62 384 -129 255 @CCCCCC,,CCCCCC,CCCC,CCCccCCCCCCCCCCCc.ccc.cCCCCCCC,CCCC,CCCCCcccCCCCCCCCCCCCCCCCCCCCC,CC,ccccCCCCCC point 0 nongenic,nongenic -3083 upstream,-7241 upstream {Y58G8A.1},{R02C2.4} 3093 CB6871_redo V 265892 1 G T 151 4.81 38 0 36 76 112 @T,CTTCTTTTTattTTTTTCCCTCTTcttttattTCTctctTTtctT,cccctcTTtttcttttt,,t,t.,Tt.tc,,,.c,c,cc.t,,....,.,. point 0 nongenic,nongenic -2414 upstream,-7910 upstream {Y58G8A.1},{R02C2.4} 3094 CB6871_redo V 265967 1 A T 3 6.06 0 12 15 170 185 @tgtgt,tttttttttt,,gttGttGtgg,tt.ttttgtttt.t.tttgttgggt.ttttttttttttttttttttgtttgtttttttttttggttttt. point 0 nongenic,nongenic -2339 upstream,-7985 upstream {Y58G8A.1},{R02C2.4} 3095 CB6871_redo V 266054 1 A T 3 5.31 0 2 22 26 48 @Tt,,,T,TTTtT.tttT,Ttctt,ctT,,ccc,,,.,,,,.,TT..t. point 0 nongenic,nongenic -2252 upstream,-8072 upstream {Y58G8A.1},{R02C2.4} 3096 CB6871_redo V 266107 1 T C 3 4.88 0 2 21 34 55 @Cc..c.C,,Cc,cCcc,.Cc,,...CCC.Ccc,,..Ccc,.,cccccgcccccCc point 0 nongenic,nongenic -2199 upstream,-8125 upstream {Y58G8A.1},{R02C2.4} 3097 CB6871_redo V 266166 1 A C 18 4.25 63 62 294 -39 255 @....c...c..........c.c.cc.....c.c,c...........c...,,C,cC,,..c.C.ccc.c.c.,C,.....cc...cc.,...gcc..,, point 0 nongenic,nongenic -2140 upstream,-8184 upstream {Y58G8A.1},{R02C2.4} 3102 CB6871_redo V 306874 1 G T 87 3.50 63 6 1 3 4 @.TTT point 0 nongenic,nongenic,nongenic -2159 upstream,1436 into,545 downstream {F33E11.3},{F33E11.6b},{F33E11.6a} 3103 CB6871_redo V 306925 1 G A 200 1.00 63 62 0 11 11 @AAAAAAAAAAA point 0 nongenic,nongenic,nongenic -2210 upstream,1487 into,494 downstream {F33E11.3},{F33E11.6b},{F33E11.6a} 3105 CB6871_redo V 353703 1 A C 224 1.00 63 62 4 16 20 @cCcCCCcCccCc,C.CC,C, point 0 nongenic,nongenic,nongenic -6063 upstream,1906 into,4914 into {T22H9.1},{T22H9.2b},{T22H9.2a} 3106 CB6871_redo V 361876 1 A G 255 1.00 63 62 0 30 30 @gGgGGGgGgggggggGGgGGgggGGtgggg point 0 SNP none {haw68038} 5240 CB6871_redo V 469097 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @,,,,cc indel 0 nongenic,nongenic -3793 upstream,-535 upstream {M02H5.2},{M02H5.12} 3117 CB6871_redo V 826830 1 C G 202 1.00 63 62 6 17 23 @Ggg.g.,G.ggG.G.ggGgGGgG point 0 nongenic,nongenic,nongenic -3805 upstream,-6839 upstream,418 into {F41H8.4},{F41H8.1},{F41H8.2} 3119 CB6871_redo V 907030 1 C T 255 1.00 63 62 0 31 31 @TTtttttTTTTtTttTTTtTTTTtTttTttt point 0 SNP none {haw69383} 3120 CB6871_redo V 939128 1 G C 255 1.31 63 62 1 29 30 @,CcCCCCCCcCCCCcCccCCCCCcccCccc point 0 silent CTG->CTC[Leu->Leu] {Y50D4C.2} 3123 CB6871_redo V 1185765 1 G A 152 1.00 63 62 0 5 5 @aaaAA point 0 nongenic,nongenic,nongenic -1046 upstream,-10544 upstream,868 into {Y50D4A.3},{Y50D4A.2.1},{Y50D4A.4} 3124 CB6871_redo V 1185767 1 A T 68 1.00 63 26 1 4 5 @ttTT, point 0 nongenic,nongenic,nongenic -1048 upstream,-10542 upstream,870 into {Y50D4A.3},{Y50D4A.2.1},{Y50D4A.4} 3138 CB6871_redo V 1273400 1 C G 101 2.31 63 62 0 9 9 @gGggggggg point 0 nongenic,nongenic 425 downstream,811 downstream {Y75B7B.1},{Y75B7B.2} 3139 CB6871_redo V 1273408 1 C G 64 2.50 63 48 0 6 6 @gggggg point 0 nongenic,nongenic 433 downstream,803 downstream {Y75B7B.1},{Y75B7B.2} 3140 CB6871_redo V 1273548 1 C G 141 1.44 63 62 0 11 11 @ggggggggggg point 0 nongenic,nongenic 573 downstream,663 downstream {Y75B7B.1},{Y75B7B.2} 3142 CB6871_redo V 1309479 1 C T 255 1.00 63 62 5 25 30 @t.t,t.tTTtTT,tttttTTTTTTTT.ttt point 0 nongenic,nongenic -10145 upstream,-5626 upstream {F16B3.1},{F16B3.2} 3148 CB6871_redo V 1637978 1 G T 135 5.56 35 62 60 70 130 @,,T,TT,,TTT,TTT,TtT.TTTT,T,T.t,TT,TTtT,T,T,,..TtTTTTTTT.ttT,TTTTT.t,TT.tTTTT,.TT,T,TttTTTTTt,,,.,,T point 0 nongenic,nongenic -2330 upstream,1305 into {Y46H3D.2},{Y46H3D.3} 3149 CB6871_redo V 1638167 1 T A 3 7.31 0 2 63 85 148 @,,.A,...A.,..,,,,,,,,.AAaaAaaAaaa.a,aaAA,AAA,AaAAaA,AAA,a.aAAAaaA,A.A.aaaAAAaaaa.AaaaAA.aAAAAaaAAaa point 0 nongenic,nongenic -2141 upstream,1116 into {Y46H3D.2},{Y46H3D.3} 3150 CB6871_redo V 1638979 1 A G 255 2.88 63 62 80 175 255 @GG,G,,,gggG,,G,GGgg.ggg.gggg.gggggg.G,,,Ggg.g..ggg,G,GGGg.ggg.gg.ggGGG,G.gg.g.gggggggggg.g.ggggG,,, point 0 nongenic,nongenic -1329 upstream,304 into {Y46H3D.2},{Y46H3D.3} 3151 CB6871_redo V 1712941 1 C T 5 4.81 0 16 1 4 5 @tTTt, point 0 nongenic,nongenic -4302 upstream,1550 into {ZK697.5},{Y46H3C.1} 3160 CB6871_redo V 1714669 1 T C 222 2.19 58 62 8 18 26 @........CCCcCccCCcCCCCCCCc point 0 nongenic,nongenic -2574 upstream,732 into {ZK697.5},{Y46H3C.1} 3162 CB6871_redo V 1916087 1 C T 157 1.75 63 62 9 23 32 @tt.TT.tT,t,..tTTTTTTT.TTtttt,tt. point 0 nongenic,nongenic -233 upstream,886 downstream {Y32G9A.10},{Y32G9A.13} 3164 CB6871_redo V 2087756 1 C G 246 1.12 63 62 1 15 16 @GggGgGgGgG.GGgGG point 0 nongenic,nongenic,nongenic -483 upstream,439 downstream,533 downstream {F36F12.4},{F36F12.3},{F36F12.3b} 3165 CB6871_redo V 2087758 1 G A 194 1.12 63 62 2 13 15 @aAaAaAaA.AAaAA, point 0 nongenic,nongenic,nongenic -481 upstream,441 downstream,535 downstream {F36F12.4},{F36F12.3},{F36F12.3b} 3166 CB6871_redo V 2255011 1 G A 171 1.50 63 62 0 8 8 @AAAAAAAA point 0 nongenic -407 upstream {F41B5.8} 3173 CB6871_redo V 2364629 1 G A 3 2.00 0 2 5 7 12 @,,,,,aaaaaaa point 0 nongenic 2903 into {Y19D10A.10} 3178 CB6871_redo V 2552967 1 A C 3 2.00 0 24 4 7 11 @,,,cc,ccccc point 0 nongenic,nongenic -3206 upstream,1451 into {Y45G12C.3},{Y45G12C.11} 3179 CB6871_redo V 2578146 1 G C 161 1.00 63 62 0 8 8 @cCcCCCCC point 0 nongenic,nongenic -2725 upstream,244 into {C29G2.3},{C29G2.4} 3180 CB6871_redo V 2646142 1 G A 193 1.00 63 62 4 17 21 @,taaA.aa.Aa,aAAaAaAAA point 0 missense GAC->AAC[Asp->Asn] {W02H5.1} 3181 CB6871_redo V 2646661 1 G C 9 1.00 63 62 1 3 4 @.CAC point 0 nongenic,nongenic 282 downstream,404 downstream {W02H5.1},{W02H5.8} 3182 CB6871_redo V 2650067 1 A T 94 1.25 38 62 3 6 9 @.t..tttTt point 0 nongenic,nongenic -7964 upstream,2590 into {W02G9.5},{W02H5.8} 3192 CB6871_redo V 2832040 1 C T 255 1.00 63 62 5 30 35 @TtTttttTTTTtt.tttTt..ttTt,ttT.ttTtT point 0 missense CCT->TCT[Pro->Ser] {T03D3.3} 3194 CB6871_redo V 3017813 1 A G 255 6.75 63 62 0 29 29 @GGGGggGggGgggggGggggGGGggGgGg point 0 nongenic 546 downstream {K12D9.14} 161497 CB6871_redo V 3212658 108 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2468 to 2576 bp into {K08D9.3} 3203 CB6871_redo V 3556390 1 A C 33 1.00 63 4 2 5 7 @Cccc,.g point 0 nongenic,nongenic -1155 upstream,812 downstream {T24A6.18},{T24A6.19} 3204 CB6871_redo V 3556391 1 C A 4 1.00 63 32 3 3 6 @aaa,.. point 0 nongenic,nongenic -1156 upstream,811 downstream {T24A6.18},{T24A6.19} 3206 CB6871_redo V 3615042 1 C A 255 1.00 63 62 4 22 26 @aAa.Aaaaa.aaaaaAAA.aa.aaAA point 0 nongenic,nongenic -503 upstream,-539 upstream {T22F3.11b},{T22F3.11a} 3208 CB6871_redo V 3890893 1 G T 38 1.00 63 38 1 3 4 @TTT. point 0 nongenic,nongenic -46 upstream,56 downstream {C17E7.9a,C17E7.9b},{C17E7.12} 3209 CB6871_redo V 4000230 1 C T 255 1.00 63 62 3 26 29 @ttTttTttt.,ttTtTtTttT.TttttTt point 0 missense GTC->ATC[Val->Ile] {K09D9.11} 5247 CB6871_redo V 4139271 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @,..,GgGg indel 0 nongenic,nongenic -147 upstream,460 downstream {Y45G5AL.2},{T05B4.1} 3214 CB6871_redo V 4164869 1 A C 255 1.00 63 62 1 24 25 @CCCccCC,CCCCcCCCcccccCccC point 0 missense ATT->CTT[Ile->Leu] {Y45G5AM.3} 3217 CB6871_redo V 4257405 1 C T 141 1.00 63 62 8 15 23 @,TT,,t,TTTtTt.tTT,,.tTt point 0 nongenic,nongenic -844 upstream,537 downstream {ZC142.2},{F47D2.3} 3218 CB6871_redo V 4296909 1 T A 105 1.00 63 62 3 8 11 @,..aAAaAaAa point 0 nongenic,nongenic,nongenic -3397 upstream,180 into,2768 into {F47D2.10b},{ZC132.3a},{ZC132.3b} 3219 CB6871_redo V 4329455 1 A C 255 1.00 63 62 0 29 29 @cCCCCcCCcccCcCccCCCcCCCcccCcC point 0 SNP none {haw75410} 3220 CB6871_redo V 4343578 1 A C 218 6.56 63 62 0 15 15 @CCCCCCCCCCCCCCC point 0 nongenic,nongenic -2281 upstream,2154 into {D2063.3a.1},{F32D1.1} 3221 CB6871_redo V 4351933 1 T G 13 3.44 63 62 3 4 7 @GgGG... point 0 nongenic 2164 into {F32D1.3} 3222 CB6871_redo V 4447836 1 C G 210 1.38 63 62 0 14 14 @GGGGGGGGGGGGGG point 0 nongenic,nongenic -4760 upstream,2706 into {Y47D7A.16},{Y47D7A.14} 3223 CB6871_redo V 4597289 1 A G 255 1.00 63 62 0 25 25 @GGgggGggGggGggGGggGGggGGG point 0 SNP none {haw75689} 3224 CB6871_redo V 4704362 1 T A 58 1.00 63 62 1 4 5 @.aGAa point 0 nongenic,nongenic -3896 upstream,-6551 upstream {ZC266.1},{F39G3.6} 161498 CB6871_redo V 4909256 53 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 399 to 452 bp into {H23N18.1} 3231 CB6871_redo V 5084742 1 G A 19 2.00 46 52 5 6 11 @,Aa,Aa,A,a, point 0 missense CCG->CTG[Pro->Leu] {Y58A7A.4} 3232 CB6871_redo V 5084780 1 A G 168 2.00 63 62 5 16 21 @,g,g,gGGGgGGG,GGGG.gG point 0 silent GAT->GAC[Asp->Asp] {Y58A7A.4} 3233 CB6871_redo V 5084791 1 C A 188 2.00 63 62 3 19 22 @a,aAAAaAAA,AAAA.aAAAAa point 0 missense GCA->TCA[Ala->Ser] {Y58A7A.4} 3235 CB6871_redo V 5124714 1 T A 255 1.00 63 62 0 18 18 @AaaAaaaaaAaaaaaaaa point 0 SNP none {haw76186} 3242 CB6871_redo V 5284688 1 T C 238 4.94 63 62 30 194 224 @CC.,,.,.c,c,CCC.C,C,,,,,c,C,..C,CCCCCCCC.c,CCCC,CCCCCCcccccCCCC,CCC,ccCCCCCCcccccc.CCCCCCCccccccccc point 0 nongenic -6602 upstream {B0238.9} 3244 CB6871_redo V 5625698 1 T C 122 1.00 63 44 2 6 8 @,.CccCCc point 0 missense CAG->CGG[Gln->Arg] {T01C2.1} 3254 CB6871_redo V 5845361 1 T G 5 1.00 63 0 0 7 7 @CGAGGgg point 0 nongenic,nongenic,nongenic -900 upstream,342 into,344 into {F26F12.3c.1},{F26F12.3a.2,F26F12.3b},{F26F12.3a.1} 3256 CB6871_redo V 6048318 1 C A 255 1.00 63 62 0 36 36 @AaAaaaAAAaAAAaaaAAAAAaAAAaaaAaAAAaaa point 0 SNP,three_prime_UTR none,none {haw77329},{R01B10.5.1} 3257 CB6871_redo V 6052074 1 T C 255 1.00 63 62 0 18 18 @CCcCcCCCCCCcCcCCCc point 0 SNP none {haw77333} 3279 CB6871_redo V 6089692 1 A T 18 5.31 0 18 0 7 7 @Ttttttt point 0 nongenic,nongenic -19640 upstream,-6318 upstream {Y38A10A.4},{Y38A10A.7} 3287 CB6871_redo V 6172858 1 T C 3 2.75 0 2 6 54 60 @C...CCCCCCCCccCCc,CCCCCCCC,CCC,CCccCCCcCCCccCCCCCCCCCCCCcCCC point 0 silent CAA->CAG[Gln->Gln] {W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g} 3291 CB6871_redo V 6177079 1 C A 64 3.12 37 62 3 8 11 @aaaaaaaa,,, point 0 silent GTG->GTT[Val->Val] {W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g} 3294 CB6871_redo V 6178815 1 T C 3 7.12 0 20 6 13 19 @..ccc,c,c,,cccccccc point 0 missense ATT->GTT[Ile->Val] {W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g} 3295 CB6871_redo V 6179154 1 C T 3 6.56 0 2 7 18 25 @,.TTTTTTTTTTTTTTTT,T,T,,. point 0 missense GCA->ACA[Ala->Thr] {W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g} 3296 CB6871_redo V 6179156 1 A T 3 5.81 0 2 8 18 26 @.TTTTTTTTTTTTTTTT,T,T,,.,, point 0 missense CTT->CAT[Leu->His] {W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g} 3299 CB6871_redo V 6302463 1 A G 255 1.69 63 62 0 25 25 @gGGGgGggGgGGGggggGGGggggg point 0 nongenic,nongenic -1318 upstream,-3026 upstream {K12B6.1},{K12B6.7} 5255 CB6871_redo V 6865466 0 X X -1000 -999.99 -1000 -1000 6 -4 2 @,,.,,,Gg indel 0 nongenic,nongenic -10679 upstream,-4826 upstream {C55H1.2},{T19F4.1a,T19F4.1b} 3307 CB6871_redo V 6865467 1 T G 17 1.00 63 62 2 3 5 @GGG,. point 0 nongenic,nongenic -10680 upstream,-4824 upstream {C55H1.2},{T19F4.1a,T19F4.1b} 3309 CB6871_redo V 6889636 1 C G 255 1.00 63 62 0 20 20 @GgGgGGgGgggGGGgGGGGg point 0 silent GCC->GCG[Ala->Ala] {K11C4.3b} 3310 CB6871_redo V 6889637 1 G C 255 1.00 63 62 0 20 20 @CcCcCCcCcccCCCcCCCCc point 0 missense GCA->CCA[Ala->Pro] {K11C4.3b} 3311 CB6871_redo V 6941087 1 T G 4 7.06 0 18 15 28 43 @G,.,.ggG,G,,.g,gg,GGgGG,GgGggggGGggG,.G,,gg point 0 nongenic -5243 upstream {Y57E12B.3} 3312 CB6871_redo V 6941197 1 T C 3 4.44 0 2 20 44 64 @,,Ccccc.cCC.CCCCCc,CcccCCccC.,,CcC,c,ccC,c..cC,C.,cC.,.CcCCC.cCc point 0 nongenic -5353 upstream {Y57E12B.3} 3317 CB6871_redo V 6942940 1 A G 3 5.31 0 2 9 41 50 @,,,G,GgggGggg.GGgGGGG.gG.gggGGGgggGgGgGgg.g.ggGgGG point 0 nongenic -7096 upstream {Y57E12B.3} 3319 CB6871_redo V 6956711 1 T C 255 1.00 63 62 0 22 22 @CcCcCCcCCcccccccccCCgc point 0 five_prime_UTR,missense none,CTA->CCA[Leu->Pro] {T07H8.4f.2,T07H8.4f.3},{T07H8.4a,T07H8.4b,T07H8.4c,T07H8.4d.1,T07H8.4d.2,T07H8.4h.1,T07H8.4h.2,T07H8.4i,T07H8.4j} 3320 CB6871_redo V 6956743 1 C G 255 1.00 63 62 0 16 16 @GGggGGGggGGggGGg point 0 five_prime_UTR,missense none,CGC->GGC[Arg->Gly] {T07H8.4f.1,T07H8.4f.2,T07H8.4f.3},{T07H8.4a,T07H8.4b,T07H8.4c,T07H8.4d.1,T07H8.4d.2,T07H8.4h.1,T07H8.4h.2,T07H8.4i,T07H8.4j} 3321 CB6871_redo V 6956744 1 G C 255 1.00 63 62 0 17 17 @CCccCCCccCCccCCcc point 0 five_prime_UTR,missense none,CGC->CCC[Arg->Pro] {T07H8.4f.1,T07H8.4f.2,T07H8.4f.3},{T07H8.4a,T07H8.4b,T07H8.4c,T07H8.4d.1,T07H8.4d.2,T07H8.4h.1,T07H8.4h.2,T07H8.4i,T07H8.4j} 3322 CB6871_redo V 6972719 1 A T 101 1.00 63 62 1 4 5 @.tTTt point 0 nongenic,nongenic,nongenic -2609 upstream,-3609 upstream,413 into {T07H8.6},{T07H8.1},{T07H8.3} 3327 CB6871_redo V 7245105 1 C G 255 1.00 63 62 0 31 31 @ggggggGggggGGgGGGGggGgggggGgGGg point 0 SNP none {haw78505} 3328 CB6871_redo V 7403427 1 A G 255 1.00 63 62 0 35 35 @ggGgGGGGGggggGgGGGGGGggGgGGggGGgggG point 0 silent,SNP GAA->GAG[Glu->Glu],none {R13D7.3},{uCE5-1535} 3336 CB6871_redo V 7430576 1 G A 255 1.00 63 62 4 25 29 @,AAaaA,AAaAAaaaAAaAAa,.AAaaAA point 0 missense CAC->TAC[His->Tyr] {F18E3.6} 3337 CB6871_redo V 7546600 1 G A 255 1.00 63 62 0 34 34 @aAaaAaaAAaAAaaAAaaaAaaaaaAaAaAAaAA point 0 missense,SNP CAC->TAC[His->Tyr],none {C54F6.14},{uCE5-1545} 3338 CB6871_redo V 7718051 1 T C 3 5.00 63 26 1 5 6 @CCC,cc point 0 nongenic -750 upstream {ZK105.5} 3339 CB6871_redo V 7725861 1 C T 14 1.00 63 62 2 5 7 @,.TTTTT point 0 nongenic,nongenic,nongenic -1814 upstream,-2932 upstream,231 into {ZK105.6},{Y97E10C.1.1},{ZK105.8} 3340 CB6871_redo V 7860214 1 C A 255 2.06 63 62 0 35 35 @AaAAaAaaaaaaAaaAaaaaaAaaaaaaaaaaaaa point 0 nongenic,nongenic 323 downstream,510 downstream {C37C3.1a},{C37C3.1b} 3341 CB6871_redo V 7860248 1 A T 255 2.19 63 62 0 19 19 @tttttttttttttTtTTTt point 0 nongenic,nongenic 357 downstream,544 downstream {C37C3.1a},{C37C3.1b} 3350 CB6871_redo V 8056170 1 G T 255 5.56 63 62 0 24 24 @tttttttttttttTttctTtTttt point 0 nongenic,nongenic -235 upstream,165 downstream {ZC513.1},{ZC513.2} 5256 CB6871_redo V 8063694 0 X X -1000 -999.99 -1000 -1000 2 1 3 @..aaa indel 0 nongenic,nongenic -1539 upstream,-467 downstream {ZC513.9},{ZC513.10} 5258 CB6871_redo V 8233594 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @,.,,c indel 0 nongenic,nongenic,nongenic -275 upstream,-4737 downstream,-646 downstream {C16D9.2c},{C16D9.2a},{C16D9.2b} 3351 CB6871_redo V 8233595 1 A C 18 1.00 63 24 1 3 4 @cCC. point 0 SNP none {uCE5-1720} 3359 CB6871_redo V 8330569 1 A C 41 10.00 63 24 8 8 16 @..,C..CC.C.C.CCC point 0 nongenic,nongenic -4075 upstream,-6067 upstream {W02D7.9},{C08D8.2a,C08D8.2b} 3361 CB6871_redo V 8330581 1 A C 32 8.56 63 62 11 11 22 @.,C..CC.C.C.CCCC.,..CC point 0 nongenic,nongenic -4087 upstream,-6055 upstream {W02D7.9},{C08D8.2a,C08D8.2b} 3368 CB6871_redo V 9113930 1 A G 69 1.00 63 52 2 5 7 @,,ggggg point 0 nongenic,nongenic -9533 upstream,1165 into {F21C10.11a},{F21C10.7} 3369 CB6871_redo V 9162494 1 T G 255 1.94 63 62 0 30 30 @ggGGGggggggggGGGggggGGGggGgGGg point 0 missense CAA->CCA[Gln->Pro] {B0222.7} 3375 CB6871_redo V 9376379 1 G T 255 1.00 63 62 0 34 34 @TTTtTtTtTtttTTtTttTTTTTtttTtTTTtTT point 0 missense,SNP CAA->AAA[Gln->Lys],none {E02C12.10},{haw80948} 3381 CB6871_redo V 9603798 1 A G 162 6.06 63 62 3 11 14 @..gggg.gggGggg point 0 nongenic,nongenic -4736 upstream,-6258 upstream {K09G1.4a,K09G1.4b},{K09G1.3} 3382 CB6871_redo V 9662867 1 T C 255 1.00 63 62 0 14 14 @cCccCccccCCCCC point 0 nongenic,nongenic -1279 upstream,-3805 upstream {B0331.2},{ZK287.1} 3387 CB6871_redo V 9663159 1 T G 255 1.00 63 62 0 33 33 @GggGgGGggGggGgggGGggGggGGgggGgggg point 0 SNP none {haw81125} 3389 CB6871_redo V 9707449 1 T C 255 1.00 63 62 0 15 15 @ccCCCCCccCcCCCC point 0 SNP none {haw81144} 3390 CB6871_redo V 9927293 1 T A 255 1.00 63 62 0 34 34 @aaaaaAAaAaAaAAAaAAAAAaaaAaaaAaaAaA point 0 SNP none {haw81196} 3391 CB6871_redo V 9928614 1 C T 255 1.00 63 62 0 19 19 @TTtTTTTTTtTTTTtTTTT point 0 silent,SNP CAG->CAA[Gln->Gln],none {T07C12.12},{haw81197} 3392 CB6871_redo V 9980982 1 G A 194 9.19 63 62 0 10 10 @AAAAAAAAAA point 0 nongenic,nongenic -240 upstream,-274 upstream {C27H6.2},{C27H6.3} 3393 CB6871_redo V 10067797 1 A C 8 1.00 63 62 3 4 7 @,..CCcc point 0 nongenic 739 into {F57A8.4} 3395 CB6871_redo V 10136814 1 T G 3 4.62 0 2 3 5 8 @..gg,ggg point 0 nongenic,nongenic,nongenic -2692 upstream,-9108 upstream,2183 into {C08B6.7.1},{C51E3.9},{C08B6.8} 3396 CB6871_redo V 10164059 1 C G 35 1.00 63 50 1 3 4 @.GgG point 0 nongenic,nongenic -3010 upstream,171 downstream {C51E3.10},{C51E3.6} 3398 CB6871_redo V 10269849 1 C G 3 8.56 63 0 3 4 7 @.,,gggg point 0 nongenic,nongenic,nongenic -7214 upstream,-7948 upstream,437 into {Y22F5A.3b},{Y22F5A.4.1},{Y22F5A.3a} 3400 CB6871_redo V 10397712 1 C A 255 1.00 63 62 0 45 45 @AAaAaAAaaAAAAAAaaAaaAaaaAAAaaAAaAaaAAaaaAaAAA point 0 SNP none {haw81401} 3401 CB6871_redo V 10444115 1 A T 255 1.00 63 62 0 21 21 @tttTTtttTTTTTttTtTTtt point 0 SNP none {haw81421} 3403 CB6871_redo V 10449487 1 T C 168 5.62 62 62 27 62 89 @ccC.,Ccc,.CC.,CCcC,cC,....ccC,.cc.c,,,CCCC,,c.C..,.c,,cCCCCcCCCCcCCCCCCCCCCcccccCCccCcCCC point 0 nongenic 386 downstream {Y32F6A.6} 3406 CB6871_redo V 10449934 1 A G 16 6.38 0 12 0 8 8 @GGGGGGGG point 0 nongenic 833 downstream {Y32F6A.6} 3409 CB6871_redo V 10621928 1 C A 255 1.00 63 62 0 32 32 @aAAaaAaaaaAaaAaaaaaAaaAaAAAAaAAA point 0 SNP none {haw81482} 3410 CB6871_redo V 10696346 1 A T 138 1.00 63 62 0 6 6 @ctttTt point 0 nongenic -6178 upstream {C05A2.1} 3411 CB6871_redo V 10866472 1 G A 137 1.75 63 62 7 15 22 @,,a,aaa,aaaaAaa,aAA.A, point 0 nongenic,nongenic -14381 upstream,-702 upstream {F32D8.1},{F53H10.2a} 3412 CB6871_redo V 10893331 1 A C 255 1.00 63 62 0 36 36 @cCCCCcccCCcCCcCcccCccccCcCCCcCCcccCC point 0 SNP none {haw81672} 3415 CB6871_redo V 11012493 1 C G 91 1.00 63 62 1 5 6 @GGGGG. point 0 nongenic -52 upstream {C13G3.1} 3419 CB6871_redo V 11180409 1 G A 255 1.00 63 62 0 24 24 @AAaAAAAAAAaAAaaAAaaaaaAA point 0 SNP none {haw81856} 3424 CB6871_redo V 11687322 1 C T 255 1.00 63 62 0 25 25 @tTTttTTTTTttTTTTTTTtTTTTT point 0 SNP none {haw82144} 3425 CB6871_redo V 11782174 1 A G 30 1.50 63 62 2 6 8 @,,gggggg point 0 nongenic,nongenic,nongenic 1073 into,384 into,745 into {F55A11.6a},{F55A11.11},{F55A11.6b} 3426 CB6871_redo V 11816342 1 A C 119 8.50 63 62 0 7 7 @TCcCCCC point 0 nongenic -10411 upstream {D2023.3} 3427 CB6871_redo V 11883417 1 A G 255 1.00 63 62 0 32 32 @gGggggGGGGggggGGGgGgggGggGGGgggG point 0 SNP none {haw82276} 3437 CB6871_redo V 12579466 1 G T 255 1.00 63 62 0 41 41 @tTTTtTttTtttttTTTtTTTTTTttTtttttttTtTTttT point 0 SNP none {haw83048} 3438 CB6871_redo V 12603640 1 T C 75 1.00 63 62 4 7 11 @,CCcccc,,,A point 0 nongenic,nongenic,nongenic -3753 upstream,-4507 upstream,3376 into {C14C10.6},{C14C10.3a.1},{C14C10.5} 3439 CB6871_redo V 12694960 1 G T 255 1.00 63 62 3 28 31 @,TTTTttTt,TttttTttTttt.tttttttt point 0 nongenic,nongenic -1369 upstream,275 into {K10C8.4},{K10C8.1} 3440 CB6871_redo V 12848008 1 T A 255 1.00 63 62 4 31 35 @aaa,aaAaAaaAaaa.a.Aa.AAaAaAAAAaaAaA point 0 nongenic,nongenic,nongenic -2698 upstream,512 into,636 downstream {C44H9.6.1},{C44H9.8},{C44H9.5} 3441 CB6871_redo V 12864064 1 A T 255 2.06 63 62 0 30 30 @TtTTTtTttTtTTTttttTtTTTtTtTtTc point 0 nongenic,nongenic,nongenic,nongenic -1829 upstream,251 downstream,300 into,558 downstream {T07F10.5},{T07F10.1a},{T07F10.6},{T07F10.1b} 3442 CB6871_redo V 12864636 1 A G 42 1.94 63 62 7 14 21 @GG...GGGG..GG.GGG.GGG point 0 nongenic,nongenic,nongenic -1257 upstream,823 downstream,872 into {T07F10.5},{T07F10.1a},{T07F10.6} 3443 CB6871_redo V 12864640 1 C G 41 1.88 63 62 7 13 20 @...GGGG..GG.GGG.GGGG point 0 nongenic,nongenic,nongenic -1253 upstream,827 downstream,876 into {T07F10.5},{T07F10.1a},{T07F10.6} 3444 CB6871_redo V 12915568 1 A T 255 1.00 63 62 0 34 34 @TttTTttTTttTTTtTtttTttTttttttTtTtT point 0 SNP none {haw83378} 3445 CB6871_redo V 12919477 1 A G 255 1.00 63 62 0 31 31 @GgggggggggGggggGggGGGgGGgGGGGgg point 0 SNP none {haw83380} 3448 CB6871_redo V 13174422 1 G A 255 1.00 63 62 4 33 37 @aAAAA.AAaAAA,aaaAaaAAAAaAaAAAA,,AaAAa point 0 silent TTG->TTA[Leu->Leu] {T09E8.1a,T09E8.1b,T09E8.1c,T09E8.1d,T09E8.1e,T09E8.1f} 3449 CB6871_redo V 13183407 1 A T 58 1.50 63 62 0 8 8 @gggtTTTT point 0 nongenic,nongenic -2258 upstream,813 into {T09E8.5},{T09E8.4} 3453 CB6871_redo V 13323884 1 G A 164 1.00 63 62 11 27 38 @aaA,AaaaAAaaAAAAa,Aa,AAa,,..,,.aAa,AAA point 0 missense GCT->GTT[Ala->Val] {C50B6.7} 3454 CB6871_redo V 13434480 1 G A 209 1.00 63 62 4 17 21 @AAaAAAAA.AaaAA.,a,aAA point 0 missense GCT->GTT[Ala->Val] {Y2H9A.1} 3455 CB6871_redo V 13466076 1 G A 255 1.00 63 62 0 34 34 @aAAaAaAaaAaAAaAaaaAAAaaAaAAAaAAAaA point 0 SNP none {haw83625} 3456 CB6871_redo V 13481160 1 G A 255 1.00 63 62 4 21 25 @AAaaaaAA,,aaAaaaaAAAA.aa, point 0 nongenic,nongenic -1319 upstream,896 downstream {T10G3.2},{T10G3.4} 3457 CB6871_redo V 13506485 1 T A 86 1.00 63 62 4 8 12 @.,..aaaaAAaa point 0 nongenic,nongenic,nongenic -3759 upstream,283 into,5216 into {R11G10.1b.1},{R11G10.4},{R11G10.1a} 3458 CB6871_redo V 13506487 1 C T 105 1.00 63 62 4 8 12 @.,..ttttTTtt point 0 nongenic,nongenic,nongenic -3761 upstream,281 into,5214 into {R11G10.1b.1},{R11G10.4},{R11G10.1a} 3459 CB6871_redo V 13508501 1 G A 255 1.00 63 62 1 30 31 @aAaAAAAAAAAAaaAAAAAAaAaAaaaAa,A point 0 nongenic 3200 into {R11G10.1a} 5282 CB6871_redo V 13524542 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @,,.,CC indel 0 nongenic,nongenic -1030 downstream,-9343 upstream {R11G10.3},{R11G10.2} 3461 CB6871_redo V 13539850 1 G T 184 1.00 63 62 0 6 6 @TTTttT point 0 SNP none {haw83676} 3472 CB6871_redo V 13645955 1 T C 255 1.00 63 62 3 30 33 @ccCCCccccCcCcc,,CCCCCccCCCC,CcCcC point 0 SNP none {haw83752} 3473 CB6871_redo V 13645978 1 C A 113 1.19 63 62 13 26 39 @AA,,.aAA,A,A.AaA,Aaa..,A,aAaA.aAaAAaA,a point 0 nongenic,nongenic -11774 upstream,888 downstream {H37A05.2},{H37A05.4} 3474 CB6871_redo V 13646003 1 A C 29 1.31 63 62 27 33 60 @,Ccc..,C,cCcC.cCcCCcC,c.....ccCC,cc..,c,,,.,,c,CCCc,c,,CcC.c point 0 nongenic,nongenic -11799 upstream,863 downstream {H37A05.2},{H37A05.4} 3475 CB6871_redo V 13665874 1 T A 89 1.00 63 62 0 5 5 @AaaaA point 0 nongenic,splice_donor 491 into,none {F58G11.2},{F58G11.2} 3476 CB6871_redo V 13696803 1 G A 255 1.00 63 62 6 34 40 @Aaa,AAAaAa,A,aAAaA,AaAaa,AAAAaaaAAa,AAAa point 0 missense GGT->AGT[Gly->Ser] {T01D3.7} 3477 CB6871_redo V 13706741 1 A G 25 1.00 63 54 1 3 4 @,gGG point 0 nongenic,nongenic,nongenic,nongenic,nongenic -4599 upstream,1333 into,1731 into,1831 into,601 into {T01D3.4},{T01D3.3a},{T01D3.3b.2},{T01D3.3b.1},{T01D3.2} 3478 CB6871_redo V 13717171 1 T C 255 1.00 63 62 0 39 39 @CCCcCcCCCccCcCCCcCCcCCCCCCcCCCcCCCCcCcC point 0 SNP none {haw83786} 5284 CB6871_redo V 13720951 0 X X -1000 -999.99 -1000 -1000 3 0 3 @...aaa indel 1 nongenic,nongenic 567 downstream,681 downstream {T01D3.6a},{T01D3.6b} 3479 CB6871_redo V 13720952 1 A G 9 5.50 63 0 0 6 6 @gggccc point 0 nongenic,nongenic 568 downstream,682 downstream {T01D3.6a},{T01D3.6b} 3484 CB6871_redo V 13886659 1 T C 255 1.00 63 62 0 24 24 @CCcCcCcCcCCcCccccCCCCCCC point 0 SNP none {haw83916} 3485 CB6871_redo V 13888688 1 A G 255 1.00 63 62 0 29 29 @gGggGggGGGggggGGgGGGGggGgGggG point 0 SNP none {haw83918} 3486 CB6871_redo V 13917512 1 A T 242 1.00 63 62 7 29 36 @TttTt.ttttt.TT,t,TT.T,tTtTTtt,TttTtT point 0 nongenic,nongenic,nongenic -1108 upstream,-2095 upstream,520 into {C06B3.10},{C06B3.8.1},{C06B3.9} 3487 CB6871_redo V 13931064 1 A T 255 1.00 63 62 0 35 35 @TtttttTTtTTTTTTTtTTTtttTTttttTttTTt point 0 missense,SNP TTA->TTT[Leu->Phe],none {C06B3.14},{haw83931} 3488 CB6871_redo V 13958462 1 G T 255 1.00 63 62 2 26 28 @ttttTttTtt,T,tTtTTtTTttTtAtt point 0 nongenic,nongenic -158 upstream,262 downstream {R10D12.10},{R10D12.11} 3490 CB6871_redo V 13958678 1 A G 31 1.00 63 12 1 3 4 @GGg, point 0 nongenic,nongenic -374 upstream,46 downstream {R10D12.10},{R10D12.11} 3491 CB6871_redo V 13981688 1 G A 16 1.00 63 62 14 18 32 @AAA.A.AA..AA...AA..A...AA.A.AAAA point 0 silent GTC->GTT[Val->Val] {T26F2.2} 3492 CB6871_redo V 14024360 1 G A 255 1.00 63 62 3 38 41 @aaaaa.AAAAAAa,AaaAaaAa.aaaAaaAAaAAaaAaAaA point 0 nongenic,nongenic -1206 upstream,456 downstream {T08G5.15},{T08G5.2} 3494 CB6871_redo V 14132114 1 G A 255 1.00 63 62 3 38 41 @aaAAaaAaAaa,AAaaAAaaaaaaaAAaa.aaA,aaaaaaA point 0 nongenic,nongenic,nongenic -3149 upstream,220 into,8985 into {H39E23.1c},{H39E23.1b},{H39E23.1a} 3495 CB6871_redo V 14133119 1 A T 255 1.00 63 62 6 21 27 @Tt.Tt.tT.T.tTT,.TtttttTTtTT point 0 SNP none {haw84111} 3499 CB6871_redo V 14155634 1 T C 3 5.44 0 2 4 5 9 @.ccc,c..c point 0 nongenic -1175 upstream {AH10.2} 3501 CB6871_redo V 14472889 1 C T 255 1.00 63 62 0 30 30 @ttTTTTttTtTtTTTTtTTTTttTttTttt point 0 nongenic,nongenic,nongenic -1561 upstream,376 into,464 downstream {F08H9.7},{F08H9.5},{F08H9.6} 3505 CB6871_redo V 14596251 1 A T 255 1.00 63 62 0 35 35 @TTTtTcTTTtTtTtTTTtttTTTttTttttTtTtT point 0 missense CTA->CAA[Leu->Gln] {R11H6.1.1,R11H6.1.2} 3506 CB6871_redo V 14733448 1 G C 255 1.00 63 62 0 29 29 @ccCcCccCcCCccccCccCCcCcCcCcCc point 0 missense CTT->GTT[Leu->Val] {Y50E8A.4a,Y50E8A.4b,Y50E8A.4c} 3507 CB6871_redo V 14743838 1 T C 255 1.44 63 62 0 23 23 @CCCcccccCCCcCcccCCCccCc point 0 nongenic -2532 upstream {Y50E8A.6} 3510 CB6871_redo V 14744337 1 G C 196 2.12 38 62 0 16 16 @CCcCCCCcCcccCccc point 0 nongenic -3031 upstream {Y50E8A.6} 3513 CB6871_redo V 14744882 1 A C 54 1.00 63 62 1 3 4 @ccc, point 0 nongenic,nongenic -3576 upstream,780 downstream {Y50E8A.6},{Y50E8A.7} 3514 CB6871_redo V 14744895 1 T A 85 1.00 63 62 1 4 5 @.AAAA point 0 nongenic,nongenic -3589 upstream,767 downstream {Y50E8A.6},{Y50E8A.7} 5286 CB6871_redo V 14768216 1 X X -1000 -999.99 -1000 -1000 6 16 22 @..g.g.g., indel -1 nongenic,nongenic -17779 upstream,-5119 upstream {Y50E8A.17},{Y50E8A.16} 3562 CB6871_redo V 15025490 1 C T 255 1.00 63 62 0 27 27 @ttttTtTTTttTTTTTTtTttTtTttt point 0 nongenic,nongenic,nongenic 226 downstream,271 downstream,524 downstream {F14H8.6b},{F14H8.6a},{F14H8.4} 3563 CB6871_redo V 15159871 1 C T 255 1.00 63 62 0 21 21 @TTTttTttTTtTTtTtttTTT point 0 missense ACA->ATA[Thr->Ile] {T09F5.3} 3564 CB6871_redo V 15193910 1 C T 255 1.00 63 62 0 46 46 @TTttTTTTttTTTtTttttTTttTTttTTtTttttttTTTTtTTtt point 0 missense GAT->AAT[Asp->Asn] {Y75B12B.13} 3574 CB6871_redo V 15434045 1 G A 50 1.69 63 62 36 49 85 @aa.aA,A.a,.aAA...,Aaa..a..,aaAA..a.aAAAA.A.AAaA,a.A.A.A.A,AaaAaa.aAA,a,A,..a.a.a.a,,a point 0 nongenic -1501 upstream {T26H5.8} 3575 CB6871_redo V 15434980 1 G C 40 1.00 63 62 41 65 106 @,c.CC,...,ccc.,CcCC.C.,C.,c,CC.cC.cCcC.c.C.C,,c,.c,.c,CCCcCccc,,C.CCCcC,ccc.,c.c..CcCCcc,C,,CcccCC, point 0 SNP none {haw85321} 3576 CB6871_redo V 15435294 1 C A 5 1.00 63 62 39 46 85 @aAA..aa,aaaA..aa.aa,AA,aaAaAaa.Aaa,a,a,a..,Aa,,A,aa..aaa....Aa,A..,.,aaaaa...A,,.,,A. point 0 SNP none {haw85323} 3579 CB6871_redo V 15479200 1 C A 255 1.00 63 62 0 27 27 @aAaAaAAAAaAaAaaAaaAaaAAaaaa point 0 SNP none {haw85361} 3589 CB6871_redo V 15581676 1 T C 255 1.38 63 62 0 31 31 @cCcccccccCCCcccccccCCCCCcccCCcc point 0 nongenic,nongenic -3995 upstream,-854 upstream {B0391.10},{F28F8.7} 3590 CB6871_redo V 15581801 1 T C 229 1.00 63 62 0 8 8 @CccccCCC point 0 nongenic,nongenic -3870 upstream,-979 upstream {B0391.10},{F28F8.7} 3597 CB6871_redo V 15850381 1 C T 255 1.56 63 62 0 43 43 @TTttTTTtTttTTTTtTTGTTtttTTtTtTtTtTtTtTtTttT point 0 nongenic -797 upstream {K08G2.12} 3598 CB6871_redo V 15924824 1 A G 255 1.00 63 62 0 39 39 @GgGGGGGggGgGggGgGgGGgGGgGgGGggGgGggGGgG point 0 nongenic,nongenic -377 upstream,1306 into {F35E8.12},{F35E8.13} 3599 CB6871_redo V 15962862 1 C T 255 1.00 63 62 0 29 29 @TTtTTTttTTtTtTTtTttttTtTttttT point 0 nongenic 960 downstream {F36G9.9} 3601 CB6871_redo V 16325364 1 A G 3 1.00 63 0 0 5 5 @Cgggg point 0 nongenic,nongenic -3979 upstream,2088 into {F57G8.7},{F57G8.8} 3603 CB6871_redo V 16345604 1 C T 255 1.00 63 62 3 27 30 @TTTTT,,TTTtT.TTTTtTTTTttttttTT point 0 nongenic,nongenic -1429 upstream,877 into {W08G11.1},{W08G11.5} 3604 CB6871_redo V 16356182 1 C T 255 1.00 63 62 3 45 48 @TTTtttttTTTtttTTTTTTTTtT,TtTtTTT.tT.TTTtTTTtTTTt point 0 nongenic -1312 upstream {W08G11.4} 3605 CB6871_redo V 16358416 1 A T 255 1.00 63 62 5 28 33 @,TTttTtTtTtttTttT.Ttttttt.,ttT.Tt point 0 nongenic,nongenic -9238 upstream,922 into {W08G11.3a},{W08G11.4} 3607 CB6871_redo V 16420522 1 G A 255 1.00 63 62 0 25 25 @aAaaaaAAaaaaaaAAAaAAaaaAa point 0 SNP none {haw88457} 5289 CB6871_redo V 16460134 1 X X -1000 -999.99 -1000 -1000 4 -2 2 @.... indel -1 SNP none {uCE5-2399} 3608 CB6871_redo V 16480149 1 G C 12 1.00 63 2 0 4 4 @CCCC point 0 nongenic,nongenic -800 upstream,159 downstream {T08G3.11},{F57E7.4} 3609 CB6871_redo V 16480151 1 C G 3 1.19 63 12 1 4 5 @GGGG. point 0 nongenic,nongenic -802 upstream,157 downstream {T08G3.11},{F57E7.4} 3614 CB6871_redo V 16597221 1 G A 255 1.00 63 62 5 27 32 @AAAAAaa,AA,,AAaAa.AAAAAAaAAA,Aaa point 0 nongenic -1899 upstream {T03E6.7.1} 3615 CB6871_redo V 16599021 1 C T 255 1.00 63 62 4 32 36 @TTtT.tttTTtttTt.tt.TtTttTT.TtTtttTtT point 0 missense GCC->ACC[Ala->Thr] {T03E6.9} 3616 CB6871_redo V 16625948 1 G A 255 1.00 63 62 6 29 35 @AaAaaA.aaAaaAAA,aaaAAAAaaa.,AaA,,aa point 0 missense ACA->ATA[Thr->Ile] {W06G6.1} 3617 CB6871_redo V 16684344 1 G C 5 1.69 63 38 1 8 9 @CCCACCCC, point 0 nongenic,nongenic -1010 upstream,508 into {F14F8.5},{F14F8.7} 5290 CB6871_redo V 16707701 1 X X -1000 -999.99 -1000 -1000 14 -12 2 @,....g.gg.,,,,,,. indel -1 nongenic -1081 upstream {Y70C5C.2} 3638 CB6871_redo V 16723977 1 T C 255 1.00 63 62 0 26 26 @cCcCcccCCCCCCcccCCcCcccccC point 0 nongenic,nongenic -160 upstream,-3209 upstream {Y70C5C.6a,Y70C5C.6b},{T25E12.14} 3639 CB6871_redo V 16723993 1 G C 255 1.00 63 62 0 29 29 @CCCCCCcccCCcCcccccCCCcCcCCcCc point 0 nongenic,nongenic -176 upstream,-3193 upstream {Y70C5C.6a,Y70C5C.6b},{T25E12.14} 3640 CB6871_redo V 16733914 1 A C 255 1.00 63 62 0 25 25 @ccCccCcCCCcccCcCCccCccCcc point 0 missense,SNP TTT->GTT[Phe->Val],none {T25E12.10},{haw89342,snp_T25E12[1]} 3641 CB6871_redo V 16758355 1 A T 112 1.00 63 62 4 8 12 @.tT.TTtTT..T point 0 SNP none {haw89380} 3642 CB6871_redo V 16816476 1 T C 255 1.00 63 62 0 27 27 @ccCCCcCcCCCccCCCcCCCCCcCCCC point 0 nongenic 938 into {T20B3.1} 3643 CB6871_redo V 16832157 1 G A 255 1.00 63 62 2 27 29 @AAA,a,AAaAAAAaAAAAaAaAAAAaAaA point 0 nongenic,nongenic -1130 upstream,-163 upstream {T20B3.7},{T20B3.3} 3644 CB6871_redo V 16874737 1 C G 14 1.00 63 62 4 4 8 @GGgg..,. point 0 nongenic,nongenic,nongenic -1110 upstream,-3277 upstream,690 into {F49A5.10},{F49A5.6},{F49A5.8} 3650 CB6871_redo V 16982761 1 A T 162 1.88 63 62 0 10 10 @Tttttttttt point 0 nongenic 910 downstream {Y102A5C.25} 3651 CB6871_redo V 17040175 1 C A 34 9.00 50 10 2 2 4 @aa,, point 0 nongenic,nongenic -2386 upstream,-4254 upstream {F28B1.1},{F49H6.11} 3652 CB6871_redo V 17040210 1 T C 120 5.31 63 62 0 9 9 @CCCCCCCCC point 0 nongenic,nongenic -2351 upstream,-4289 upstream {F28B1.1},{F49H6.11} 3653 CB6871_redo V 17052174 1 C T 255 1.00 63 62 1 24 25 @TtTTTtTtTt.TTTttTttTtTTtT point 0 nongenic,nongenic -3226 upstream,201 into {F28B1.4},{F28B1.3} 3660 CB6871_redo V 17189488 1 C A 129 1.44 63 62 4 7 11 @,..,AAaaAAA point 0 nongenic 333 into {Y68A4A.3} 3664 CB6871_redo V 17378169 1 G A 255 1.00 63 62 0 35 35 @AAaAAAaAaaaaaAaAaaaaAaaAAAAaAaaaAAA point 0 SNP none {haw90646} 3672 CB6871_redo V 17619073 1 C G 255 1.12 63 62 0 35 35 @GGGGGgGgGgggGGggGGGgggGGggGGggGGGGg point 0 nongenic,nongenic -1088 upstream,-2183 upstream {Y6G8.8},{Y6G8.6} 3673 CB6871_redo V 17652357 1 A G 38 1.00 37 10 0 6 6 @GGGGGG point 0 nongenic -1866 upstream {F57G4.8} 3674 CB6871_redo V 17652364 1 A G 46 1.00 37 28 0 7 7 @GGGGGGG point 0 nongenic -1873 upstream {F57G4.8} 3675 CB6871_redo V 17737089 1 C T 3 3.44 0 18 3 4 7 @,T.T,TT point 0 nongenic,nongenic -6739 upstream,2772 into {W06D12.2},{W06D12.1} 3676 CB6871_redo V 17738056 1 T C 19 9.12 0 14 0 8 8 @CCCCCcCC point 0 nongenic,nongenic -7706 upstream,1805 into {W06D12.2},{W06D12.1} 3677 CB6871_redo V 17738078 1 A C 13 5.81 0 12 0 5 5 @CCCCC point 0 nongenic,nongenic -7728 upstream,1783 into {W06D12.2},{W06D12.1} 3680 CB6871_redo V 17738184 1 T C 12 5.25 0 12 0 4 4 @CCCC point 0 nongenic,nongenic -7834 upstream,1677 into {W06D12.2},{W06D12.1} 3681 CB6871_redo V 17738206 1 T C 16 6.88 0 16 0 10 10 @CCCCCCCCCC point 0 nongenic,nongenic -7856 upstream,1655 into {W06D12.2},{W06D12.1} 3682 CB6871_redo V 17738238 1 T C 161 7.81 63 62 0 21 21 @CCCCCCCCCcCCcCcCcCCCC point 0 nongenic,nongenic -7888 upstream,1623 into {W06D12.2},{W06D12.1} 3683 CB6871_redo V 17867118 1 T G 176 1.56 63 62 0 11 11 @ggGgggggggg point 0 nongenic,nongenic,nongenic -11158 upstream,-4254 upstream,3502 into {Y59A8A.3.1},{Y59A8A.2},{Y59A8A.1} 3684 CB6871_redo V 17867536 1 G A 48 2.00 63 62 8 13 21 @AAAaAAaAAAAaA........ point 0 nongenic,nongenic,nongenic -11576 upstream,-3836 upstream,3084 into {Y59A8A.3.1},{Y59A8A.2},{Y59A8A.1} 3685 CB6871_redo V 17867542 1 C T 47 2.00 63 62 9 9 18 @TTtTTTTtT......... point 0 nongenic,nongenic,nongenic -11582 upstream,-3830 upstream,3078 into {Y59A8A.3.1},{Y59A8A.2},{Y59A8A.1} 3686 CB6871_redo V 17867621 1 T C 95 1.50 38 62 5 5 10 @.....ccccc point 0 nongenic,nongenic,nongenic -11661 upstream,-3751 upstream,2999 into {Y59A8A.3.1},{Y59A8A.2},{Y59A8A.1} 3687 CB6871_redo V 17867627 1 A T 137 1.25 38 62 4 11 15 @....ttttttttttt point 0 nongenic,nongenic,nongenic -11667 upstream,-3745 upstream,2993 into {Y59A8A.3.1},{Y59A8A.2},{Y59A8A.1} 3690 CB6871_redo V 17886165 1 G T 12 6.50 0 2 0 4 4 @TTTT point 0 nongenic 2788 into {C06H5.6} 161509 CB6871_redo V 17886186 49 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2718 to 2767 bp into {C06H5.6} 3694 CB6871_redo V 17898272 1 G A 255 4.06 63 62 0 35 35 @AAAAAAAaaaaaaAAAAaaaaaAAaaAAaaAAAAA point 0 nongenic,nongenic -1517 upstream,-1523 upstream {C06H5.1},{C06H5.2} 3698 CB6871_redo V 17950254 1 T A 255 1.00 63 62 0 21 21 @AaaAAaaaaaAaAAaAAAaaA point 0 SNP none {haw91922} 3699 CB6871_redo V 17961088 1 T A 156 2.56 63 62 0 16 16 @AaaaAAAaAaAaaaaA point 0 nongenic 5728 into {Y59A8B.23a,Y59A8B.23b} 3700 CB6871_redo V 17972070 1 G T 249 1.19 63 62 0 16 16 @ttTTTTTTTttTTtTT point 0 nongenic,nongenic,nongenic,nongenic -14154 upstream,-5254 upstream,3512 into,3570 into {Y59A8B.21},{Y59A8B.23a,Y59A8B.23b},{Y59A8B.22.1},{Y59A8B.22.2} 3701 CB6871_redo V 17972080 1 G T 220 1.19 63 62 2 16 18 @T,TTT,TttTTtTTTTtT point 0 nongenic,nongenic,nongenic,nongenic -14144 upstream,-5264 upstream,3522 into,3580 into {Y59A8B.21},{Y59A8B.23a,Y59A8B.23b},{Y59A8B.22.1},{Y59A8B.22.2} 3702 CB6871_redo V 17989159 1 T C 7 1.00 63 4 2 3 5 @,,ccc point 0 nongenic,nongenic -9109 upstream,2935 into {Y59A8B.22.1,Y59A8B.22.2},{Y59A8B.21} 3704 CB6871_redo V 18022415 1 G A 255 1.00 63 62 0 36 36 @aAaaAAAAAAaAAAaaaAaAAAAAaAaAAAAAAaaA point 0 nongenic,nongenic,nongenic -27 upstream,-29 upstream,-5122 upstream {Y59A8B.6.1},{Y59A8B.6.2},{Y59A8B.4} 3707 CB6871_redo V 18211056 1 C T 12 4.50 63 2 0 4 4 @TTTT point 0 nongenic -2004 upstream {F16H6.7} 3708 CB6871_redo V 18212838 1 C T 255 1.00 63 62 6 29 35 @TT,,tt,tTTTTt.TTt.tTtt.TtttTttTTTTT point 0 nongenic,nongenic -3786 upstream,804 downstream {F16H6.7},{F16H6.8} 3710 CB6871_redo V 18265358 1 T A 226 1.00 63 62 7 26 33 @,aAA..a.,aaaaaAA.aAAAaaaaa,AaaAaa point 0 silent GTA->GTT[Val->Val] {R10E8.6} 3711 CB6871_redo V 18314063 1 T C 28 1.00 63 62 4 5 9 @cCccc,.., point 0 nongenic,nongenic -4497 upstream,-8525 upstream {B0462.3},{Y51A2A.7} 3712 CB6871_redo V 18380230 1 T G 235 1.00 63 62 6 23 29 @GGggGg.ggGGGgGggGG,,,,GGgGGG. point 0 SNP none {haw92765,pas8875} 3726 CB6871_redo V 18501663 1 A T 255 1.00 63 62 5 28 33 @tTtTtTt,TTtT,TttTttTTTtTt.,tTT.tT point 0 nongenic,nongenic,nongenic,nongenic -14440 upstream,-7175 upstream,6238 into,6441 into {Y51A2D.18},{Y51A2D.1},{Y51A2D.19a,Y51A2D.19b},{Y51A2D.19c} 3727 CB6871_redo V 18537035 1 C T 123 1.00 63 62 0 6 6 @ttTTTT point 0 nongenic 3116 into {Y51A2D.7a,Y51A2D.7b} 3728 CB6871_redo V 18537037 1 G C 62 1.00 63 60 0 4 4 @CCCC point 0 nongenic 3118 into {Y51A2D.7a,Y51A2D.7b} 3729 CB6871_redo V 18537038 1 T C 62 1.00 63 34 0 4 4 @CCCC point 0 nongenic 3119 into {Y51A2D.7a,Y51A2D.7b} 3733 CB6871_redo V 18656480 1 T C 255 1.00 63 62 0 33 33 @ccCCCCCCcCCcCCCCcCCccCcCcccccCCCC point 0 nongenic,nongenic,nongenic 324 into,348 downstream,408 into {Y69H2.3c},{Y69H2.12},{Y69H2.3b} 3736 CB6871_redo V 18681507 1 G T 16 1.81 0 2 0 5 5 @TTtTt point 0 nongenic 2820 into {Y69H2.10b} 3740 CB6871_redo V 18690296 1 T A 255 1.00 63 62 4 27 31 @aaAAaAaAaaa.AaaAaAaaaaAA.AAA.,a point 0 nongenic,nongenic,nongenic -486 upstream,-9120 upstream,293 into {Y69H2.6},{Y69H2.8},{Y69H2.7} 3742 CB6871_redo V 18785911 1 G C 7 1.00 63 2 2 2 4 @Cc., point 0 nongenic,nongenic,nongenic -1901 upstream,-5728 upstream,843 into {Y17D7B.2},{Y17D7B.4.1},{Y17D7B.3} 3743 CB6871_redo V 18785912 1 T G 3 1.00 63 6 2 2 4 @Gg., point 0 nongenic,nongenic,nongenic -1900 upstream,-5729 upstream,842 into {Y17D7B.2},{Y17D7B.4.1},{Y17D7B.3} 3744 CB6871_redo V 18858714 1 C T 220 1.06 63 62 0 16 16 @tttttttTtttttttt point 0 SNP none {haw93705} 3745 CB6871_redo V 18858782 1 T G 56 1.19 63 62 5 8 13 @.....GGGGGGGG point 0 nongenic 405 into {Y80D3A.1} 3748 CB6871_redo V 18941842 1 A C 3 2.00 0 16 13 31 44 @C,ccc.,,.cC.cCCc,ccCCcCc,CcccCC,CcC,c.CCCC,. point 0 missense GAA->GCA[Glu->Ala] {Y80D3A.8} 3749 CB6871_redo V 18959045 1 A G 9 8.94 5 2 0 35 35 @ggGGGGGGGGGGGGGGGGGGGGGGGGGGGGGgGGG point 0 nongenic,nongenic -1773 upstream,841 into {Y80D3A.9},{Y39B6A.46} 3750 CB6871_redo V 18959114 1 A G 239 3.62 50 62 0 19 19 @ggGgGgggggGgGgggggg point 0 nongenic,nongenic -1842 upstream,910 into {Y80D3A.9},{Y39B6A.46} 3751 CB6871_redo V 18959149 1 A G 170 5.00 50 62 0 15 15 @ggggggggggGgGgg point 0 nongenic,nongenic -1877 upstream,945 into {Y80D3A.9},{Y39B6A.46} 3752 CB6871_redo V 18959246 1 A T 65 7.69 63 62 5 12 17 @.t....TTTTTTtTTTT point 0 nongenic,nongenic -1974 upstream,892 into {Y80D3A.9},{Y39B6A.46} 3753 CB6871_redo V 18959249 1 T C 127 9.25 63 62 2 11 13 @..CCCCCCcCCCC point 0 nongenic,nongenic -1977 upstream,889 into {Y80D3A.9},{Y39B6A.46} 3755 CB6871_redo V 18962810 1 C T 251 1.00 63 62 0 9 9 @ttTTTTttt point 0 nongenic,nongenic -2672 upstream,1745 into {Y39B6A.46},{Y39B6A.43a,Y39B6A.43b} 3758 CB6871_redo V 18965154 1 T A 255 1.00 63 62 0 20 20 @AaaaaaaaaAaaaAAaaaaA point 0 SNP none {haw94014} 3760 CB6871_redo V 18980199 1 A T 90 6.44 30 62 2 13 15 @TTTTTTTtttTt.t, point 0 nongenic,nongenic,nongenic -1084 upstream,-2255 upstream,853 into {Y39B6A.39},{Y39B6A.41},{Y39B6A.40} 3762 CB6871_redo V 19052087 1 T C 255 1.00 63 62 1 22 23 @cccccccccccCccccc.CCccc point 0 SNP none {haw94226} 3763 CB6871_redo V 19063597 1 C T 247 1.00 63 62 3 16 19 @T.TttT,TtTTttT,tTtt point 0 silent CTG->TTG[Leu->Leu] {Y39B6A.19a,Y39B6A.19b} 3769 CB6871_redo V 19100192 1 A T 226 3.19 63 62 6 10 16 @,tTtTtTtTtT,.,., point 0 nongenic 882 into {Y39B6A.16} 3771 CB6871_redo V 19119922 1 T C 116 4.44 63 62 0 7 7 @ccccccc point 0 nongenic,nongenic,nongenic,nongenic -589 upstream,-7572 upstream,335 into,368 into {Y39B6A.13},{Y39B6A.11},{Y39B6A.12b},{Y39B6A.12a} 3773 CB6871_redo V 19134888 1 C T 255 1.00 63 62 4 19 23 @tTTTtT.ttTTtttt.TTt.T.t point 0 nongenic,nongenic -1348 upstream,-1585 upstream {Y39B6A.10},{Y39B6A.9} 3775 CB6871_redo V 19187353 1 T C 255 1.00 63 62 0 20 20 @CcCCcccCCcCccCcccCCC point 0 nongenic 512 into {Y39B6A.48} 3777 CB6871_redo V 19439412 1 C T 255 2.38 63 62 1 32 33 @TtttTTtttTTtttttTTTttTtttT,tTTTtt point 0 nongenic,nongenic 1484 into,1492 into {M04C3.1a},{M04C3.1b.1,M04C3.1b.2} 3779 CB6871_redo V 19499424 1 G C 219 1.00 63 62 0 11 11 @ccCccCCCCcC point 0 nongenic,nongenic -3651 upstream,-3772 upstream {Y43F8B.3a,Y43F8B.3b},{Y43F8B.5} 3780 CB6871_redo V 19506793 1 T A 255 1.00 63 62 0 20 20 @AAaAaAaAAaaaAAAAAAAA point 0 nongenic,nongenic -11141 upstream,3718 into {Y43F8B.5},{Y43F8B.3a,Y43F8B.3b} 3784 CB6871_redo V 19681373 1 C T 255 1.00 63 62 1 15 16 @tTtTtTTttT.TtttT point 0 nongenic 6536 into {Y43F8C.12} 3795 CB6871_redo V 19754362 1 T A 10 1.00 63 52 4 5 9 @..,.aAAAA point 0 nongenic,nongenic,nongenic -2154 upstream,-3185 upstream,966 into {W04E12.9},{W04E12.6},{W04E12.8} 3796 CB6871_redo V 19754364 1 A T 53 1.00 63 10 4 6 10 @..,.tTTTTt point 0 nongenic,nongenic,nongenic -2152 upstream,-3187 upstream,964 into {W04E12.9},{W04E12.6},{W04E12.8} 3798 CB6871_redo V 19816962 1 C T 255 1.06 63 62 0 20 20 @tttttTTTTTTtTTTTtTTt point 0 SNP none {haw96009} 3801 CB6871_redo V 19828951 1 T C 255 1.00 63 62 0 36 36 @CcccCCcCccccCccccCCCccCCccccCcCcCCcc point 0 silent CAA->CAG[Gln->Gln] {Y116F11B.3.1,Y116F11B.3.2} 3802 CB6871_redo V 19862667 1 A C 255 1.00 63 62 0 20 20 @CcccCcCcCcCCcCcccccC point 0 ncRNA,SNP none,none {Y116F11B.9b},{haw96106} 3803 CB6871_redo V 19866093 1 C T 255 1.00 63 62 4 33 37 @T,tTttTttttTTTTT.TTtTTTtt,TtTttTTtTT. point 0 ncRNA none {Y116F11B.9b} 3804 CB6871_redo V 19868214 1 C G 255 1.00 63 62 0 20 20 @ggGGGgggGgGGGgGGGgGG point 0 nongenic,nongenic -267 upstream,-9969 upstream {Y116F11B.9a},{Y116F11B.11} 3809 CB6871_redo V 20019022 1 G A 224 1.00 63 62 10 36 46 @Aaaa,aa.aA.AAAAAAAa.Aaa.AaAAAA,.,aa,AaaaaA.AaA point 0 nongenic -3986 upstream {Y113G7A.5} 3810 CB6871_redo V 20328260 1 G A 63 1.00 63 34 0 4 4 @aAAc point 0 nongenic 240 downstream {Y38H6A.1} 3812 CB6871_redo V 20337877 1 C T 255 1.00 63 62 0 17 17 @TTtTTtTTTtttTTTTT point 0 SNP none {haw97199} 3813 CB6871_redo V 20363943 1 T C 78 1.12 63 62 12 17 29 @C.c.,CC.cC..ccc,.cc.c,.CCcc.c point 0 nongenic 1739 into {K02E2.2} 3820 CB6871_redo V 20508851 1 C A 255 1.00 63 62 0 29 29 @AaaAAAaaaaAaaaaaaaaAAAaAAAaAa point 0 nongenic,nongenic,nongenic -3790 upstream,-5877 upstream,1120 into {Y38H6C.4},{Y38H6C.8},{Y38H6C.5} 3821 CB6871_redo V 20550701 1 C T 255 1.00 63 62 1 41 42 @ttttTtTtttttTTttTtTttttt,TttTttttTTtttTttt point 0 nongenic,nongenic -3589 upstream,427 into {Y38H6C.18},{Y38H6C.20} 3823 CB6871_redo V 20599605 1 T C 39 1.00 63 62 13 15 28 @Cc,c.c.,c.,CC,CC,C.,C,cC,Cc, point 0 nongenic,nongenic,nongenic -149 upstream,-27 upstream,-452 upstream {F46B3.2},{F46B3.1},{F46B3.17} 3824 CB6871_redo V 20623218 1 G A 220 1.00 63 62 3 14 17 @AaAa.AaaaaAa,Aaa. point 0 nongenic -94 upstream {F46B3.8} 3836 CB6871_redo X 5530 1 G C 19 1.69 63 24 3 3 6 @.,.CCC point 0 nongenic 1625 into {CE7X_3.1} 3837 CB6871_redo X 5531 1 C G 55 1.81 63 18 2 3 5 @,.GGG point 0 nongenic 1624 into {CE7X_3.1} 3838 CB6871_redo X 5694 1 G T 31 1.25 63 0 0 4 4 @TtTt point 0 premature_stop GAG->TAG[Glu->stop] {CE7X_3.1} 3842 CB6871_redo X 5703 1 A T 96 1.25 63 44 0 4 4 @tttT point 0 missense ATT->TTT[Ile->Phe] {CE7X_3.1} 3844 CB6871_redo X 59982 1 C T 255 1.56 63 62 3 27 30 @Tt,tTTTtTttTTTtttTT.TtTtTtt.tt point 0 silent CGC->CGT[Arg->Arg] {Y73B3A.18a,Y73B3A.18b} 3847 CB6871_redo X 106540 1 T A 3 2.06 0 24 6 19 25 @,a,AA.AaAaa.AaaA.AAAAAA,A point 0 nongenic,nongenic -1777 upstream,430 downstream {Y73B3A.4},{Y73B3A.5} 3849 CB6871_redo X 106701 1 A G 79 3.38 50 62 1 10 11 @ggg.ggGGGgG point 0 nongenic,nongenic -1938 upstream,269 downstream {Y73B3A.4},{Y73B3A.5} 3850 CB6871_redo X 161175 1 G T 255 8.56 63 62 0 24 24 @TTtTttTttttTtTTttTTtTttt point 0 nongenic -3814 upstream {Y73B3A.10} 3857 CB6871_redo X 187274 1 C G 255 1.00 63 62 0 25 25 @GggGGGGggggGggGggggggGgGg point 0 SNP none {haw98538} 3859 CB6871_redo X 289841 1 G C 255 2.81 63 62 0 25 25 @CCCCCcCccCccCcCcCccCCCCcc point 0 nongenic,nongenic -3316 upstream,-7406 upstream {Y47C4A.1},{R57.2} 3860 CB6871_redo X 289852 1 G C 255 4.19 63 62 1 21 22 @ccCcCcCccCC,CccCcccccc point 0 nongenic,nongenic -3327 upstream,-7395 upstream {Y47C4A.1},{R57.2} 3864 CB6871_redo X 299633 1 T A 255 1.00 63 62 0 30 30 @aaaaaAAAaaAAaaaAaaaaAaaAaaaaAA point 0 SNP none {haw98564} 3871 CB6871_redo X 341454 1 G C 255 1.00 63 62 0 28 28 @CCcCCcCccccCCcCCcCccccccCCcC point 0 nongenic -221 upstream {C04E7.4} 3876 CB6871_redo X 347035 1 G T 9 1.00 63 12 1 3 4 @tT.t point 0 nongenic,nongenic -6584 upstream,-745 upstream {C04E7.2},{C04E7.3} 3877 CB6871_redo X 347042 1 G T 133 1.00 63 62 1 7 8 @tT.tTTTT point 0 nongenic,nongenic -6577 upstream,-752 upstream {C04E7.2},{C04E7.3} 3879 CB6871_redo X 348115 1 C A 255 1.00 63 62 0 36 36 @aAAAaAaAaaaaAAaAAaAAaaaAaAaaAaaaaAaa point 0 SNP none {haw98580} 3885 CB6871_redo X 379726 1 G C 35 8.31 63 10 1 3 4 @ccc. point 0 nongenic 844 into {R04A9.3} 3886 CB6871_redo X 379727 1 A G 36 8.31 63 10 1 3 4 @ggg. point 0 nongenic 843 into {R04A9.3} 3888 CB6871_redo X 382890 1 C G 255 1.00 63 62 0 29 29 @gGGgggggGGggggGGgggggGgGggggg point 0 nongenic -179 upstream {R04A9.4} 3889 CB6871_redo X 424545 1 T C 255 2.12 63 62 0 29 29 @CCccCcCCcccCCccCCCCcCCCCCCcCc point 0 nongenic 1240 into {ZK1193.4} 3890 CB6871_redo X 424576 1 T C 255 2.12 63 62 0 32 32 @CcCCCCCCcCcCCCcCccccCccCcCCCccCc point 0 SNP none {haw98625} 3891 CB6871_redo X 424587 1 T C 255 1.69 63 62 0 30 30 @CcCcCCCcCccccCccCcCCCccCcccCcc point 0 SNP none {haw98626} 3892 CB6871_redo X 424629 1 T C 255 1.06 63 62 0 31 31 @cCccCCCcccccccCCccccccCcCCCcCCC point 0 nongenic 1324 into {ZK1193.4} 3893 CB6871_redo X 424765 1 G T 255 3.00 63 62 0 26 26 @TTTTtttTttTTTTTTttTtTTTTTt point 0 SNP none {haw98627} 5305 CB6871_redo X 425163 0 X X -1000 -999.99 -1000 -1000 3 -2 1 @,,,ttt indel 1 nongenic -1241 downstream {ZK1193.4} 3894 CB6871_redo X 425164 1 T G 17 1.00 63 62 0 5 5 @Cgggg point 0 nongenic 1240 into {ZK1193.4} 161511 CB6871_redo X 425405 57 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 942 to 999 bp into {ZK1193.4} 3900 CB6871_redo X 425547 1 C G 255 1.00 63 62 0 14 14 @GggGGggGgGGGgg point 0 nongenic 857 into {ZK1193.4} 3901 CB6871_redo X 443404 1 C G 55 10.00 28 26 0 4 4 @GgGG point 0 nongenic -9602 upstream {ZK1193.5a,ZK1193.5b} 3904 CB6871_redo X 473633 1 C T 56 1.00 63 62 15 20 35 @T,T,.Tt.TT.t.t.t,,.,ttTT,.TT,TT.TTt point 0 nongenic -2929 upstream {F38G1.3} 3905 CB6871_redo X 486102 1 A G 255 1.00 63 62 0 31 31 @tgGgGgGgggGGgGGGggggggGGgggGGGg point 0 SNP none {haw98666} 3906 CB6871_redo X 488781 1 A C 255 8.56 63 62 0 19 19 @cccccccccccccccCCcC point 0 nongenic -915 upstream {F38G1.2} 3907 CB6871_redo X 488806 1 G T 255 1.00 63 62 0 23 23 @tttttttttTTtTTttTTTTTtT point 0 SNP none {haw98668} 3908 CB6871_redo X 491868 1 C A 255 1.00 63 62 0 36 36 @aaaaaaAAaaaAaaaAAAAAaaaAAaAAaAAaAaaA point 0 SNP none {haw98673} 3909 CB6871_redo X 538129 1 G T 207 2.31 63 62 0 9 9 @tttTttttt point 0 nongenic,nongenic,nongenic -2292 upstream,-4979 upstream,943 into {F28C10.3},{F28C10.1},{F28C10.4} 3910 CB6871_redo X 538148 1 C G 10 2.00 63 62 0 5 5 @ggaaa point 0 nongenic,nongenic,nongenic -2311 upstream,-4960 upstream,962 into {F28C10.3},{F28C10.1},{F28C10.4} 3911 CB6871_redo X 538182 1 A G 209 1.25 63 62 0 12 12 @gggggggggggg point 0 nongenic,nongenic,nongenic -2345 upstream,-4926 upstream,996 into {F28C10.3},{F28C10.1},{F28C10.4} 3915 CB6871_redo X 610690 1 C T 110 1.00 63 62 12 23 35 @T.Ttt,t.TtTTt,t.t,T,T,t,t,,TTTtttN. point 0 nongenic,nongenic,nongenic -2196 upstream,442 downstream,576 downstream {F13C5.5},{F13C5.6b},{F13C5.6a} 3916 CB6871_redo X 645469 1 C T 78 1.00 63 62 11 16 27 @T.,Tt,tTt.Tt,.,t..ttTt.Ttt. point 0 silent AAG->AAA[Lys->Lys] {M6.1a,M6.1b} 3917 CB6871_redo X 817619 1 A T 255 1.00 63 62 0 26 26 @TtttTtTtTTtTttttttTtttTTtT point 0 SNP none {haw98919} 3920 CB6871_redo X 849289 1 T A 160 1.00 63 62 7 19 26 @AaaAa,.aaAA..a,a.AaAAaaA.a point 0 nongenic,nongenic,nongenic -10658 upstream,-7793 upstream,2219 into {F56F10.2},{F39H12.3},{F39H12.4} 3928 CB6871_redo X 1015236 1 C T 69 1.00 63 62 12 21 33 @T..TttTT.,TTTT,.T.tT,T.t,.Tt,ttTt point 0 nongenic 2330 into {F55A4.2} 3929 CB6871_redo X 1017350 1 T A 255 1.00 63 62 0 23 23 @AAAaAaaAaAaaaaaAaAaaaaa point 0 missense AAC->ATC[Asn->Ile] {F55A4.2} 3930 CB6871_redo X 1047732 1 C T 255 1.00 63 62 0 31 31 @tTttTTtttTTtttTttttTttTtTtTTtTt point 0 nongenic,nongenic -1527 upstream,-6479 upstream {F55A4.8a},{K03E6.3} 3933 CB6871_redo X 1073732 1 G T 255 1.00 63 62 0 41 41 @TTTtTtttTttttttttttTtttTttTtTttTTTTtttTTt point 0 SNP none {haw99047} 3934 CB6871_redo X 1133524 1 T A 255 1.00 63 62 0 22 22 @AAAaAAAAAAaaAaaaaAAAAA point 0 SNP none {haw99081} 3935 CB6871_redo X 1133556 1 T A 255 1.00 63 62 0 27 27 @aaaaAAAAAAaaAAAAAaaaAaAAAAA point 0 SNP none {haw99082} 3937 CB6871_redo X 1192518 1 G C 70 1.00 63 4 1 3 4 @cCC. point 0 nongenic,nongenic -626 upstream,-746 upstream {T13G4.1},{T13G4.4} 3938 CB6871_redo X 1192519 1 T G 65 1.00 63 4 1 3 4 @gGG. point 0 nongenic,nongenic -625 upstream,-747 upstream {T13G4.1},{T13G4.4} 3939 CB6871_redo X 1198528 1 T G 57 1.00 63 14 3 9 12 @GgGgggGGG... point 0 nongenic -49 upstream {T13G4.5} 3940 CB6871_redo X 1198529 1 G T 15 1.00 63 56 3 7 10 @TtttTTT... point 0 nongenic -50 upstream {T13G4.5} 3941 CB6871_redo X 1201508 1 A G 31 1.00 63 28 1 4 5 @GGGG, point 0 nongenic,nongenic -3029 upstream,868 downstream {T13G4.5},{T13G4.6} 3944 CB6871_redo X 1226077 1 G C 218 1.00 63 62 0 11 11 @cccCccccccc point 0 SNP none {haw99127} 3945 CB6871_redo X 1239148 1 C T 255 1.00 63 62 0 40 40 @ttTtTTtTtTTTtTTtttTTtTtTttTTTttttttTTttT point 0 SNP none {haw99128} 3946 CB6871_redo X 1308534 1 C A 255 1.00 63 62 0 37 37 @AaAAaAaaAAAAAaAAaAAaAAAAaAaAAaAAaaaAa point 0 SNP none {haw99198} 3947 CB6871_redo X 1333863 1 A C 255 1.00 63 62 0 13 13 @ccCCCCCcCCCCC point 0 SNP none {haw99214} 3951 CB6871_redo X 1472305 1 G T 255 1.00 63 62 0 24 24 @tTttTTtttTTtTTTTTtttTTtt point 0 SNP none {haw99409} 3955 CB6871_redo X 1519786 1 C A 255 1.00 63 62 0 20 20 @AaaAAAaaAAaAaaaaAaAA point 0 nongenic 1698 into {F09E10.8a,F09E10.8b} 3956 CB6871_redo X 1519787 1 C A 255 1.00 63 62 0 19 19 @aaAAAaaAAaAaaaaAaAA point 0 nongenic 1697 into {F09E10.8a,F09E10.8b} 3957 CB6871_redo X 1604340 1 G T 126 1.00 63 62 0 5 5 @ttttt point 0 nongenic -561 upstream {H11E01.3} 3958 CB6871_redo X 1615121 1 C A 36 1.00 63 0 0 4 4 @AAaa point 0 silent CCC->CCA[Pro->Pro] {H11E01.3} 3972 CB6871_redo X 1717742 1 C A 255 1.00 63 62 0 26 26 @aaaaAaAaaaaaAaaaaAAAaAAAaA point 0 SNP none {haw99773} 3981 CB6871_redo X 1885828 1 C T 3 5.81 1 0 28 69 97 @.t,.tt,ttTTttt.ttt,tttt.,tT,tTtttTtT,ttTt,ttT,tTtTtttttttttt,T,T,t,,Ttt,,,ttt.,,tttt,t,t,ttt,,ttt point 0 nongenic -6353 upstream {B0294.3} 3982 CB6871_redo X 1885991 1 C T 15 7.25 0 0 31 54 85 @,T,,t,t,,TTTTTtTt,TT,tt,TT,,TTT,tTT,,TT,tT,TTtt,ttT,t,,t,,T,,,T.T,tttttt,TTtTtTT,T,,t point 0 nongenic -6190 upstream {B0294.3} 3996 CB6871_redo X 2057781 1 G C 12 1.00 63 0 0 4 4 @CCCC point 0 nongenic -7256 upstream {F49H12.7} 4001 CB6871_redo X 2165879 1 A G 13 1.00 63 62 6 6 12 @gggggG...... point 0 silent GTA->GTG[Val->Val] {F48B9.3} 4002 CB6871_redo X 2192525 1 T C 58 1.00 63 62 14 19 33 @ccC.C.CCC,.cc,c.CCcC.,.c,,,cc.,cC point 0 missense TGT->CGT[Cys->Arg] {T24C12.2} 4004 CB6871_redo X 2219012 1 C G 16 1.00 63 62 3 6 9 @GGGGGG,.. point 0 nongenic,nongenic -4464 upstream,37 downstream {T14F9.3},{T14F9.4a} 4007 CB6871_redo X 2370396 1 G T 44 1.00 63 62 3 5 8 @,.,tTTtt point 0 nongenic,nongenic -4459 upstream,-5595 upstream {T24D8.6},{F47G3.3} 4008 CB6871_redo X 2370397 1 A G 89 1.00 63 44 0 8 8 @CcCgGGgg point 0 nongenic,nongenic -4460 upstream,-5594 upstream {T24D8.6},{F47G3.3} 4009 CB6871_redo X 2428246 1 T A 30 1.00 63 62 2 3 5 @aaA,. point 0 nongenic,nongenic -746 upstream,-795 upstream {T07D1.1a,T07D1.1b},{T07D1.1c} 4014 CB6871_redo X 2492936 1 A T 190 1.00 63 62 8 25 33 @Tt.,ttttTTttTTTt.tT,.T,ttTt..ttTt point 0 missense AAA->AAT[Lys->Asn] {K02E10.2a,K02E10.2b} 4016 CB6871_redo X 2524915 1 T G 119 1.00 63 62 0 4 4 @GGGG point 0 nongenic,nongenic -9603 upstream,292 downstream {K02E10.8a,K02E10.8b},{R11B5.1} 4017 CB6871_redo X 2724306 1 T C 147 1.00 63 62 14 25 39 @CCc,,C.,C,C,ccCcccc,,CccCCCCC,.,C,CCc,. point 0 five_prime_UTR,silent none,TCA->TCG[Ser->Ser] {T02C5.5d.3},{T02C5.5a,T02C5.5b,T02C5.5c,T02C5.5e} 4019 CB6871_redo X 2794548 1 T G 98 1.00 63 62 2 6 8 @,.gGgGgg point 0 nongenic,nongenic,nongenic,nongenic -8557 upstream,4678 into,543 into,619 into {C14A11.2},{C14A11.3b},{C14A11.3a},{C14A11.3c} 4020 CB6871_redo X 2826263 1 A T 72 1.00 63 62 1 4 5 @,TTTt point 0 nongenic,nongenic -12143 upstream,559 into {C14A11.6},{C14A11.7} 4023 CB6871_redo X 2894432 1 A T 255 2.75 63 62 0 26 26 @ttTttTttTTTTtTtttTttTtTTtT point 0 SNP none {snp_B0410[1]} 4027 CB6871_redo X 3027787 1 C G 228 1.06 63 62 0 26 26 @GTgggggggggGggggggggggggGg point 0 SNP none {haw101125} 4039 CB6871_redo X 3158187 1 C T 50 1.00 63 32 1 4 5 @TtTt. point 0 nongenic,nongenic -1742 upstream,-5733 upstream {C15C7.2.1},{C15C7.5} 4040 CB6871_redo X 3158207 1 C A 255 1.00 63 62 0 12 12 @aaaAAaaAaAaA point 0 nongenic,nongenic -1722 upstream,-5753 upstream {C15C7.2.1},{C15C7.5} 4054 CB6871_redo X 3207501 1 C T 126 1.75 63 62 0 4 4 @ttTt point 0 nongenic 692 into {F28B4.4} 4055 CB6871_redo X 3220659 1 G A 64 1.00 63 12 0 4 4 @Aaaa point 0 nongenic,nongenic -299 upstream,-375 upstream {F28B4.2a},{F28B4.2b} 4059 CB6871_redo X 3225118 1 T G 62 1.00 63 60 0 4 4 @GgGa point 0 nongenic -4758 upstream {F28B4.2a} 4060 CB6871_redo X 3237694 1 A G 255 1.00 63 62 0 33 33 @GgGgggGgGggggGGgGgggGGggGgGggGgGg point 0 missense,SNP TTT->TCT[Phe->Ser],none {F40F4.6},{haw101350} 4061 CB6871_redo X 3293919 1 C T 77 1.00 63 60 1 4 5 @TTTt, point 0 nongenic -3726 upstream {K09C4.2} 4063 CB6871_redo X 3367002 1 C G 255 1.00 63 62 0 40 40 @GGggGgggggGgGgGgGgggGGgggGgggGgGggGggGgg point 0 nongenic,nongenic -1945 upstream,-4519 upstream {ZK563.2},{ZK816.5} 4064 CB6871_redo X 3367003 1 G C 255 1.00 63 62 0 41 41 @CCccCcccccCcCcCcCcccCCcccCcccCcCccCccCccc point 0 nongenic,nongenic -1944 upstream,-4520 upstream {ZK563.2},{ZK816.5} 5328 CB6871_redo X 3376415 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @,..GGg indel 0 nongenic,nongenic -1685 upstream,774 downstream {ZK563.4a,ZK563.4b},{ZK563.5} 4065 CB6871_redo X 3408399 1 T C 255 2.00 63 62 0 27 27 @CCCCCCcCCCCCccCCCccCCcccCcC point 0 silent ATT->ATC[Ile->Ile] {C04F6.1.1,C04F6.1.2,C04F6.1.3} 4066 CB6871_redo X 3412023 1 T G 43 1.00 63 36 1 8 9 @GGGC,GGGg point 0 ncRNA none {C04F6.6} 4068 CB6871_redo X 3631670 1 T G 79 3.31 63 62 13 47 60 @,.G..g,,,GgG,,GGGGG,GggGgg.GGgGGGGGGGG,GGGG,GggggGgGGGGGGGGG point 0 SNP none {uCE6-825} 4069 CB6871_redo X 3631690 1 C G 199 3.75 63 62 47 87 134 @,GG,GG,G.gGg..GG.,GGGGGGG,G,G,,G.gggGg,GGGGGGGGG.gGGggGGGggG,.ggggGG.ggGgggg.gGagggg,GGGGGG,GGGg... point 0 SNP none {haw101541} 4070 CB6871_redo X 3631792 1 G T 56 1.00 63 62 23 52 75 @t,ttt,t..TTtt,,t.ttTtttTttT.t,t,,tttT.,tt.tttt,ttttt,..T.,ttttta..a,TttCCTt point 0 SNP none {haw101542} 4071 CB6871_redo X 3653458 1 T C 255 1.00 63 62 0 24 24 @cCcCcccCcCCccCCCcCcCcCcC point 0 SNP none {haw101553} 5332 CB6871_redo X 3751247 3 X X -1000 -999.99 -1000 -1000 5 -2 3 @,,.t,t. indel -3 nongenic -8936 upstream {T14G12.4a} 4074 CB6871_redo X 3796657 1 T C 32 1.00 63 62 2 8 10 @CC.,Cccccc point 0 nongenic,nongenic -1276 upstream,-1506 upstream {F35A5.5},{F35A5.3} 4075 CB6871_redo X 3807994 1 C A 255 1.00 63 62 0 22 22 @aAAaAaaaaAAAAaAAaaAaaA point 0 missense CCA->CAA[Pro->Gln] {F35A5.1} 4076 CB6871_redo X 3811996 1 T G 105 1.50 63 62 2 4 6 @gggg,, point 0 nongenic 4398 into {F35A5.1} 4078 CB6871_redo X 3812067 1 A T 117 1.38 63 62 11 14 25 @,TT,,Tt,,,,tttT,,,tT,TTTT point 0 nongenic 4327 into {F35A5.1} 4079 CB6871_redo X 3812100 1 T A 75 1.00 63 62 14 16 30 @,,,aA,AAAAAAa,,,AA,AAA,a,,A,,, point 0 nongenic 4294 into {F35A5.1} 4080 CB6871_redo X 3902119 1 A C 154 1.00 63 62 0 6 6 @cccccc point 0 nongenic,nongenic -2451 upstream,-6460 upstream {T22B2.4a},{F47F2.3} 4082 CB6871_redo X 3903048 1 T C 126 1.00 63 62 0 6 6 @CccCCC point 0 nongenic,nongenic -1522 upstream,-7389 upstream {T22B2.4a},{F47F2.3} 4083 CB6871_redo X 3924055 1 A G 255 1.00 63 62 0 32 32 @GgggGggGggggGgggGggggGggGgGggggG point 0 nongenic,nongenic -2005 upstream,841 downstream {T22B2.1},{T22B2.2} 4084 CB6871_redo X 4025107 1 A G 255 1.00 63 62 0 27 27 @GGggGGggggGGggGggGGGGGgGGGg point 0 silent AAA->AAG[Lys->Lys] {R02E12.8} 4111 CB6871_redo X 4241735 1 A C 255 1.44 63 62 0 19 19 @CccCcccCccCcccccccc point 0 SNP none {haw101997} 4112 CB6871_redo X 4241797 1 A G 139 1.75 63 62 1 7 8 @gggggg,g point 0 nongenic -5974 upstream {W01H2.3a} 4114 CB6871_redo X 4241827 1 T C 131 1.56 38 62 0 14 14 @ccccccCcccCCCC point 0 nongenic -6004 upstream {W01H2.3a} 4115 CB6871_redo X 4241844 1 G A 90 1.62 38 62 4 10 14 @aaaaaAaaaA,,,, point 0 nongenic -6021 upstream {W01H2.3a} 4116 CB6871_redo X 4241867 1 G T 39 2.62 34 30 0 10 10 @TTTTTTTTTT point 0 nongenic -6044 upstream {W01H2.3a} 4117 CB6871_redo X 4241902 1 T C 119 3.00 50 62 0 6 6 @Cccccc point 0 nongenic -6079 upstream {W01H2.3a} 4119 CB6871_redo X 4242071 1 T C 26 3.00 0 26 0 12 12 @ccCCCCcCCccC point 0 nongenic -6248 upstream {W01H2.3a} 4120 CB6871_redo X 4242094 1 G A 16 2.25 0 14 0 8 8 @AAAAAAAA point 0 nongenic -6271 upstream {W01H2.3a} 4121 CB6871_redo X 4242110 1 A C 148 2.06 38 62 0 15 15 @CCCCCCCCCCCCCCC point 0 nongenic -6287 upstream {W01H2.3a} 4122 CB6871_redo X 4304410 1 G C 255 1.00 63 62 0 21 21 @CcCcCCCcCcCCCccCccCcC point 0 missense CAA->GAA[Gln->Glu] {C24A8.3} 4123 CB6871_redo X 4490691 1 C G 35 1.00 63 36 5 5 10 @GGGgg,,,,. point 0 nongenic,nongenic -10599 upstream,933 downstream {F02E8.6},{F46H6.5} 4124 CB6871_redo X 4490692 1 A C 37 1.00 63 34 5 5 10 @CCCcc,,,,. point 0 nongenic,nongenic -10600 upstream,932 downstream {F02E8.6},{F46H6.5} 4125 CB6871_redo X 4513922 1 C T 238 1.00 63 62 0 10 10 @ttttTttttT point 0 SNP none {snp_F46H6[6]} 5344 CB6871_redo X 4550017 0 X X -1000 -999.99 -1000 -1000 2 4 6 @,c.cc indel 1 nongenic -4648 upstream {C07A12.1b} 4127 CB6871_redo X 4556553 1 T G 27 1.00 63 62 1 4 5 @.GGGg point 0 nongenic,nongenic,nongenic -555 upstream,1888 into,1889 into {C07A12.1c},{C07A12.1a},{C07A12.1b} 4128 CB6871_redo X 4556555 1 G T 112 1.00 63 26 1 6 7 @.TTTtTt point 0 nongenic,nongenic,nongenic -553 upstream,1890 into,1891 into {C07A12.1c},{C07A12.1a},{C07A12.1b} 4129 CB6871_redo X 4565293 1 A C 5 1.00 63 62 4 5 9 @CcccC,,,, point 0 five_prime_UTR none {C05E11.5} 4134 CB6871_redo X 4577179 1 A T 255 1.00 63 62 0 30 30 @ttttttTTTtTTtTTTTTtTttttTtTtTT point 0 SNP none {haw102400} 4135 CB6871_redo X 4578097 1 T C 255 1.00 63 62 0 26 26 @cCCcCcCccccccCCcccccCccCcC point 0 nongenic -1381 upstream {C05E11.3} 5347 CB6871_redo X 4603454 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @,,,.Cc indel 0 inframe none {T13H2.5a} 4137 CB6871_redo X 4651742 1 G A 255 1.00 63 62 0 29 29 @aAaaAAaaaAAAAaaAAAAAAAAaaaAAa point 0 nongenic -2574 upstream {F16H11.3} 4145 CB6871_redo X 4686589 1 T C 12 1.00 63 60 1 3 4 @ccC, point 0 nongenic -8524 upstream {K02G10.4a} 5348 CB6871_redo X 4702538 0 X X -1000 -999.99 -1000 -1000 5 -2 3 @,,..,ggg indel 0 nongenic,nongenic,nongenic -3104 upstream,401 downstream,595 downstream {K02G10.6},{K02G10.7a},{K02G10.7b} 4146 CB6871_redo X 4702539 1 C G 72 1.00 63 24 4 5 9 @GGggG..., point 0 nongenic,nongenic,nongenic -3105 upstream,399 downstream,593 downstream {K02G10.6},{K02G10.7a},{K02G10.7b} 4147 CB6871_redo X 4914718 1 C T 6 1.00 63 62 1 5 6 @TTttt. point 0 missense AGA->AAA[Arg->Lys] {K05B2.3} 4148 CB6871_redo X 4938561 1 G C 47 1.00 63 38 1 3 4 @CCc. point 0 nongenic,nongenic -8840 upstream,-9456 upstream {K05B2.5b,K05B2.5c},{M03F4.3a,M03F4.3c.2} 4149 CB6871_redo X 4938562 1 A T 51 1.00 63 38 1 3 4 @TTt. point 0 nongenic,nongenic -8841 upstream,-9455 upstream {K05B2.5b,K05B2.5c},{M03F4.3a,M03F4.3c.2} 4150 CB6871_redo X 4971580 1 C T 255 1.00 63 62 0 25 25 @TtttTTTTTTtttTTtTTTtTTTtt point 0 nongenic,nongenic,nongenic -699 upstream,-715 upstream,989 downstream {M03F4.7a},{M03F4.7b},{ZC8.6} 4151 CB6871_redo X 4971581 1 A C 255 1.00 63 62 0 27 27 @cccCCCCCCcccCCcCCCcCCCccCcc point 0 nongenic,nongenic,nongenic -700 upstream,-716 upstream,988 downstream {M03F4.7a},{M03F4.7b},{ZC8.6} 4162 CB6871_redo X 5123322 1 T G 255 1.00 63 62 0 35 35 @GgGgGggGggGgGggGggGGggGGGGGggGGgGgG point 0 nongenic,nongenic -15637 upstream,-6482 upstream {C31H2.1a,C31H2.1b},{C42D8.8b.1} 4163 CB6871_redo X 5134151 1 C G 255 1.00 63 62 0 40 40 @ggggggGggggGggGgGGgggGGGGGggGGGGGgggGggg point 0 nongenic,nongenic -17311 upstream,-4808 upstream {C42D8.8b.1},{C31H2.1a,C31H2.1b} 4164 CB6871_redo X 5134152 1 G C 255 1.00 63 62 0 40 40 @ccccccCccccCccCcCCcccCCCCCccCCCCCcccCccc point 0 nongenic,nongenic -17312 upstream,-4807 upstream {C42D8.8b.1},{C31H2.1a,C31H2.1b} 4165 CB6871_redo X 5195550 1 G C 13 1.00 63 8 1 3 4 @ccC. point 0 nongenic,nongenic -2201 upstream,-6541 upstream {T03G11.1},{T03G11.8} 4169 CB6871_redo X 5229274 1 C G 12 6.81 63 0 2 3 5 @,ggg. point 0 nongenic -7264 upstream {H28G03.3} 5354 CB6871_redo X 5508058 4 X X -1000 -999.99 -1000 -1000 7 -4 3 @,..,.., indel -4 SNP none {uCE6-931} 4179 CB6871_redo X 5509589 1 C G 17 1.00 63 50 1 6 7 @GGggGG. point 0 nongenic -4374 upstream {T23F2.2a,T23F2.2b} 5358 CB6871_redo X 5819247 1 X X -1000 -999.99 -1000 -1000 5 -3 2 @,,... indel -1 SNP none {uCE6-959} 4182 CB6871_redo X 5857436 1 T G 255 1.00 63 62 0 18 18 @GGgggggGgGGGgggGGg point 0 nongenic,nongenic -3221 upstream,-5280 upstream {W06B11.4},{F49E10.5} 4183 CB6871_redo X 5883992 1 C T 255 1.00 63 62 0 26 26 @tTTttTTTTTtTTtTTTtttTTTtTt point 0 SNP none {haw103817} 4184 CB6871_redo X 6059575 1 C T 79 1.00 63 62 2 6 8 @,,tTttTt point 0 missense CCC->TCC[Pro->Ser] {C45B2.5.1,C45B2.5.2} 5360 CB6871_redo X 6075482 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,.ggg indel 0 five_prime_UTR none {C45B2.4b.1} 4185 CB6871_redo X 6107174 1 T A 255 1.00 63 62 0 36 36 @AaaaaaAaaAAaaaaAaAAAAaAaaAAaAaaaAaaa point 0 nongenic 289 into {C15H9.7} 4186 CB6871_redo X 6224850 1 C A 54 1.00 63 42 2 4 6 @AaA,A, point 0 nongenic -10978 upstream {C14F11.2} 4187 CB6871_redo X 6227740 1 T G 32 1.00 63 62 3 4 7 @..,Gggg point 0 nongenic,nongenic -13868 upstream,1651 into {C14F11.2},{C14F11.3} 4197 CB6871_redo X 6287365 1 T A 47 3.25 63 42 0 4 4 @Aaaa point 0 nongenic,nongenic,nongenic -1234 upstream,-5719 upstream,942 into {T07H6.4},{T07H6.2},{T07H6.5} 161520 CB6871_redo X 6287475 334 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3729 to 4063 bp into {T07H6.5} 4203 CB6871_redo X 6412638 1 A T 255 1.00 63 62 0 26 26 @ttTTttttTTtTTTTTtTTtTtTtTT point 0 SNP none {haw104221} 4206 CB6871_redo X 6792031 1 G C 255 1.00 63 62 0 17 17 @ccCcccCcCCccCccCc point 0 missense GAG->GAC[Glu->Asp] {H22K11.1} 4211 CB6871_redo X 6843321 1 A T 106 9.62 63 62 0 10 10 @ttTttTtttt point 0 nongenic -1387 upstream {C53B7.3a,C53B7.3b,C53B7.3c,C53B7.3d.2} 5364 CB6871_redo X 6917594 0 X X -1000 -999.99 -1000 -1000 5 -2 3 @,,,,.GG indel 0 nongenic,nongenic,nongenic -3096 downstream,-312 downstream,-3351 downstream {F14B8.1b.2},{F14B8.1b.1},{F14B8.1a} 4217 CB6871_redo X 6917595 1 C G 13 1.00 63 62 2 3 5 @GGg,, point 0 nongenic,nongenic,nongenic 3095 into,314 into,3353 into {F14B8.1b.2},{F14B8.1b.1},{F14B8.1a} 4243 CB6871_redo X 7077720 1 T C 172 6.38 63 62 66 189 255 @CCCCCCCCCCCCCCCCCCCCCCcc.accccCCC,CCC,CCCCCCCC,,CC,cccccc.cccCCCC,CCCGCCCCCCCCCCCCACCCC,ccccccccccc point 0 nongenic,nongenic -2432 upstream,-7596 upstream {B0403.6},{Y1B5A.1} 4245 CB6871_redo X 7078203 1 A G 18 8.56 0 40 76 179 255 @,GGt.g.ggg..g,GG,GggggggGGGg..G,GGg.gGGgggG,Tgg..ggG.g.Gg.g.g,G,g..ggGgggg,gggG,g..G.gggggGGGG.gggg point 0 nongenic,nongenic -2915 upstream,-7113 upstream {B0403.6},{Y1B5A.1} 4246 CB6871_redo X 7078298 1 G A 3 6.56 0 18 100 155 255 @AA,AAAaa..a.a.AAAAaa.a.aaaaaaAAAa.aaa.aaaa.aaAa.aa,a.aa.a.,,.aa.a.aa.Aa.a.aa..AAA.,.AAa.,c.A...,.,A point 0 nongenic,nongenic -3010 upstream,-7018 upstream {B0403.6},{Y1B5A.1} 4247 CB6871_redo X 7078449 1 A T 18 6.31 36 34 153 102 255 @,,,,,,,.,T,,,......,,,,t.tt..tt,T,T,,,,......tt,,,,,..,,,tT,,,,TT,,,,,,T,,,.t,T,,,.,.,,,,,..,..,,,, point 0 nongenic,nongenic -3161 upstream,-6867 upstream {B0403.6},{Y1B5A.1} 4249 CB6871_redo X 7078503 1 A G 3 8.69 0 16 41 210 251 @Gg.Ggg,,G,GGTgGGG.ggGGGGgGGggg..,G,ggGG.g,.g.GgGG.gg,GGg..gGGgggGGgggggggGG,GGggggg.gG,GGGGGGGggggG point 0 nongenic,nongenic -3215 upstream,-6813 upstream {B0403.6},{Y1B5A.1} 4251 CB6871_redo X 7078663 1 A G 3 9.06 0 12 31 208 239 @,,G,...gG....GggGGGgGGgg.G.Gg.GGG,ggGGGgGGGGgggggGGGgG,GGGgggGGGGgggg.ggggGGGGGggggggggggGGGGgggG,G point 0 nongenic,nongenic -3375 upstream,-6653 upstream {B0403.6},{Y1B5A.1} 4252 CB6871_redo X 7078698 1 T A 3 4.94 0 4 42 104 146 @GAGA,,G.A,,,a.gA.A.aaa.g..Gga.G,a.ga...AACgggggga.A.a.gaa,AA,GgggagA,A,AgaaaaGAG.gGAAGaggA.,aaaagAA point 0 nongenic,nongenic -3410 upstream,-6618 upstream {B0403.6},{Y1B5A.1} 4253 CB6871_redo X 7078863 1 A G 3 9.06 0 20 39 216 255 @,g,G.G..G,G,ggGg...GGGGGgG.CGGGGgGggggGGGGGGGG.g,GggggggGGGgggggGGGGGGG.gg.,GGGGGgggggggggggggGGGGg point 0 nongenic,nongenic -3575 upstream,-6453 upstream {B0403.6},{Y1B5A.1} 4255 CB6871_redo X 7079018 1 G A 6 7.94 27 16 81 88 169 @AAAAaaaAA..a.,,A.AAa,aa...aa.A,a,AAaa.aaa,AaAa..a.aaa.a,...,,Aa..a,ac.aa.aa.aa,,Aaa,.aa..,aa,aa..,, point 0 nongenic,nongenic -3730 upstream,-6298 upstream {B0403.6},{Y1B5A.1} 4256 CB6871_redo X 7079063 1 A G 3 8.94 0 8 40 126 166 @,,..,.GG,ggg.ggG.GG,,,..,gGGgGGgGggGG,gggGgg.gGggggggggGGGgggGGGggg,ggggggG,GGG,.gggGGG.ggggG,ggggG point 0 nongenic,nongenic -3775 upstream,-6253 upstream {B0403.6},{Y1B5A.1} 4258 CB6871_redo X 7079098 1 T G 3 5.56 27 10 47 63 110 @G,,,.,GG,,,,,.g..a,aA.AG.g,a,A.g..A.aG.a..g.aA,,ga..a.g,G,Aa.gaa.,,gG,aAGAgaa,,,gggaaaa,agggaaaAaaa point 0 nongenic,nongenic -3810 upstream,-6218 upstream {B0403.6},{Y1B5A.1} 4259 CB6871_redo X 7139444 1 C T 28 1.00 63 62 1 3 4 @.Ttt point 0 three_prime_UTR none {C54D1.3} 4260 CB6871_redo X 7145337 1 T G 11 1.00 63 22 2 2 4 @.,gg point 0 missense CAA->CCA[Gln->Pro] {C54D1.5} 4261 CB6871_redo X 7145338 1 G C 23 1.00 63 10 2 3 5 @.,ccc point 0 missense CAA->GAA[Gln->Glu] {C54D1.5} 4262 CB6871_redo X 7224737 1 A T 255 1.00 63 62 0 25 25 @TttTtTtTTTTTTTTtTtttTtTtt point 0 nongenic 2032 into {ZK867.1a,ZK867.1b,ZK867.1c,ZK867.1d} 4263 CB6871_redo X 7247377 1 C A 255 1.00 63 62 0 36 36 @aAAaaAAAAAAAAAaaAaAaAaaAAAAAaAAaaAaa point 0 SNP none {haw104705} 4275 CB6871_redo X 7431892 1 G C 255 1.00 63 62 0 25 25 @CCccCCCCCccccCcCCCcCCCccC point 0 silent CTG->CTC[Leu->Leu] {C01C10.1} 4276 CB6871_redo X 7471835 1 G A 15 1.00 63 24 7 8 15 @,.,,,,.AaAAaaaA point 0 nongenic,nongenic,nongenic -7360 upstream,-8150 upstream,3408 into {K08A8.1a,K08A8.1b},{K08A8.2a.1,K08A8.2b.2},{K08A8.3} 4279 CB6871_redo X 7527774 1 C T 199 1.00 63 62 0 11 11 @ttttttttttt point 0 SNP none {haw104910} 5376 CB6871_redo X 7559950 0 X X -1000 -999.99 -1000 -1000 8 2 10 @....,.,.cC indel 0 nongenic,nongenic -126 upstream,-950 upstream {F08C6.5},{PDB1.1b.1} 4280 CB6871_redo X 7559951 1 G C 121 1.00 63 24 3 8 11 @ccccCcCc.,, point 0 nongenic,nongenic -124 upstream,-951 upstream {F08C6.5},{PDB1.1b.1} 4281 CB6871_redo X 7559953 1 A G 25 1.00 63 62 4 6 10 @ggGgGg.,,, point 0 nongenic,nongenic -122 upstream,-953 upstream {F08C6.5},{PDB1.1b.1} 4282 CB6871_redo X 7566551 1 T C 255 1.00 63 62 0 35 35 @cCccccccCCCCccCcccCCccCCcCcCCccCCCc point 0 missense,SNP GTT->GCT[Val->Ala],none {F08C6.3},{haw104923} 4283 CB6871_redo X 7588883 1 T C 255 1.00 63 62 0 51 51 @CcCCCCcCcCCCcCcCCCcCCCCcccccCCccCCCcccCCCCCCccccCCc point 0 missense TCA->CCA[Ser->Pro] {F08C6.1a.1,F08C6.1a.2,F08C6.1c} 5378 CB6871_redo X 7644183 0 X X -1000 -999.99 -1000 -1000 3 1 4 @,.,gGgG indel 0 nongenic,nongenic -6891 upstream,-7152 upstream {F27D9.3},{F26A10.2} 4286 CB6871_redo X 7729211 1 C T 255 1.00 63 62 0 22 22 @tttTTtTttTTTtTttTTtTTT point 0 silent CTC->CTT[Leu->Leu] {K09F5.2} 4288 CB6871_redo X 7764853 1 T A 255 3.88 63 62 0 17 17 @aAAAAAaAAAAaAAAaa point 0 nongenic,nongenic,nongenic -6756 upstream,1693 into,1703 into {C47C12.4},{C47C12.6.1,C47C12.6.2},{C47C12.6.3} 4289 CB6871_redo X 7764866 1 C T 147 7.12 63 62 0 8 8 @TTtTTTtt point 0 nongenic,nongenic,nongenic -6769 upstream,1706 into,1716 into {C47C12.4},{C47C12.6.1,C47C12.6.2},{C47C12.6.3} 4295 CB6871_redo X 7771370 1 G A 197 1.00 63 62 0 10 10 @aaaaaaaaaa point 0 nongenic,nongenic,nongenic,nongenic -13273 upstream,3389 into,3390 into,3488 into {C47C12.4},{C47C12.6.2},{C47C12.6.3},{C47C12.6.1} 4297 CB6871_redo X 7771436 1 A T 164 1.31 63 62 0 7 7 @TTTTTTT point 0 nongenic,nongenic,nongenic,nongenic -13339 upstream,3323 into,3324 into,3422 into {C47C12.4},{C47C12.6.2},{C47C12.6.3},{C47C12.6.1} 4300 CB6871_redo X 7841129 1 G T 7 1.00 63 32 2 2 4 @Tt.. point 0 nongenic -1445 upstream {C54D2.1} 4301 CB6871_redo X 7866245 1 A G 12 1.00 63 26 4 6 10 @.,..gggggG point 0 nongenic -4993 upstream {C54D2.5a,C54D2.5c,C54D2.5d,C54D2.5e} 4302 CB6871_redo X 7872981 1 C A 255 1.00 63 62 0 34 34 @aAaaAAaAAAAaAaAaaAaaaaaaAaAaAAAAAa point 0 SNP none {haw105178} 5384 CB6871_redo X 7984029 0 X X -1000 -999.99 -1000 -1000 4 -3 1 @,...AA indel 0 nongenic,nongenic -1898 upstream,-2008 upstream {F45E1.4},{F45E1.6.1} 4303 CB6871_redo X 8029563 1 C T 255 1.00 63 62 0 26 26 @TtTTTTTTttTTtTtTtttTTttTtt point 0 SNP none {haw105378} 4304 CB6871_redo X 8033820 1 G C 255 1.00 63 62 0 13 13 @CCCccCCccCcCc point 0 missense GCC->GGC[Ala->Gly] {C18A11.6} 4306 CB6871_redo X 8076590 1 A T 126 1.00 63 62 0 9 9 @CCccTTttt point 0 nongenic -1097 upstream {C46F2.1} 4307 CB6871_redo X 8182016 1 G T 237 4.81 63 62 25 33 58 @TTTTTTTTtttttt,ttCTt.ttttTTtttTt.,.,..,...,.,,...,.,.T.T,t point 0 nongenic -433 upstream {C17H11.4} 4309 CB6871_redo X 8274481 1 G C 82 1.00 63 34 1 6 7 @,cCCcCC point 0 nongenic,nongenic,nongenic -3518 upstream,-616 upstream,-627 upstream {F13B9.6},{F13B9.5.1},{F13B9.5.2} 4310 CB6871_redo X 8308827 1 T A 255 1.00 63 62 0 39 39 @aaaAaAaaaaaAaAAAAaAAAaAAaaaaAAaAaaaaaaa point 0 nongenic -1206 upstream {R09F10.5} 4311 CB6871_redo X 8325358 1 G T 155 1.00 63 62 1 6 7 @,TTttTt point 0 missense CAA->AAA[Gln->Lys] {R09F10.8.1,R09F10.8.2} 4312 CB6871_redo X 8374021 1 A G 84 1.00 63 0 0 4 4 @GgGg point 0 SNP none {haw105585} 4313 CB6871_redo X 8374022 1 G A 84 1.00 63 0 0 4 4 @AaAa point 0 SNP none {haw105586} 4317 CB6871_redo X 8412180 1 G T 82 2.81 63 62 4 4 8 @....TTTT point 0 nongenic,nongenic -1745 upstream,543 into {F08F1.9},{F08F1.4a,F08F1.4b.1,F08F1.4b.2} 5390 CB6871_redo X 8550626 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @,.,Aaa indel 0 nongenic,nongenic -1576 upstream,-1711 upstream {D2021.2a},{D2021.4a,D2021.4b} 4325 CB6871_redo X 8596016 1 A G 24 1.00 63 0 2 3 5 @,.GGG point 0 missense TCC->CCC[Ser->Pro] {F18E9.7} 4326 CB6871_redo X 8602894 1 T A 75 1.06 63 62 4 9 13 @AA.AAA.,Aa,Aa point 0 nongenic,nongenic 569 downstream,768 downstream {H35N09.2},{F18E9.1} 4327 CB6871_redo X 8602905 1 T G 108 1.00 63 58 0 6 6 @GGgGGg point 0 nongenic,nongenic 558 downstream,779 downstream {H35N09.2},{F18E9.1} 4328 CB6871_redo X 8603049 1 A G 97 1.00 63 62 0 4 4 @Gggg point 0 nongenic,nongenic 414 downstream,923 downstream {H35N09.2},{F18E9.1} 4329 CB6871_redo X 8629824 1 A C 255 1.00 63 62 0 26 26 @ccCcCCccCccCCCcccCCCcccccc point 0 SNP none {haw105786} 4331 CB6871_redo X 8649757 1 C T 126 1.00 63 62 0 6 6 @tttTtT point 0 nongenic,nongenic -11477 upstream,-2718 upstream {K09E2.4a},{F12D9.2} 4338 CB6871_redo X 8986807 1 G C 255 1.00 63 62 0 24 24 @ccCccCCCCCcCcCCCcCcCcccc point 0 nongenic -1267 upstream {C24A3.6.1,C24A3.6.2} 4342 CB6871_redo X 9171369 1 G T 255 1.00 63 62 0 30 30 @TtTttTtTtTttTttttTtTttttttTTTt point 0 SNP none {haw106181} 4343 CB6871_redo X 9188219 1 C T 255 4.69 63 62 56 192 248 @,,At,,T,t,.,T..,,,,T..,,..,,,.,,,,,t,,,,.,,.,,..,.TTtTTtttTttTTTTtttT,tTTTTTTtttttTTTtTTttttTTTTttt point 0 SNP none {haw106187} 4350 CB6871_redo X 9212879 1 T G 105 1.00 63 62 1 6 7 @.GgGgGN point 0 nongenic,nongenic -1007 upstream,798 downstream {C35B8.3a.1},{C35B8.4} 4352 CB6871_redo X 9328750 1 C T 209 1.00 63 62 1 8 9 @TtTtTtTt. point 0 nongenic,nongenic -2327 upstream,-9636 upstream {T20B5.2},{F35G8.1} 4354 CB6871_redo X 9460186 1 A C 53 2.00 63 52 13 28 41 @cc,C,C,,c,CcccCCCc,,,CCCC,,,ccCCcCC,ccC,C point 0 missense GAT->GAG[Asp->Glu] {ZK899.5} 4355 CB6871_redo X 9462102 1 T C 255 1.38 63 62 0 22 22 @cccCCCCCCcCCCcCcccCccC point 0 nongenic,nongenic -1186 upstream,-1234 upstream {ZK899.6},{ZK899.5} 4356 CB6871_redo X 9536669 1 T A 255 1.00 63 62 0 32 32 @AAAAAaAAaaAAaAaAaaaAaAAAaAaaaaaA point 0 SNP none {haw106328} 4357 CB6871_redo X 9604616 1 G C 4 3.31 63 2 1 5 6 @CCC,Cc point 0 nongenic -5881 upstream {C11E4.6} 4358 CB6871_redo X 9604618 1 G C 3 3.31 63 0 2 4 6 @,CCC,c point 0 nongenic -5879 upstream {C11E4.6} 4362 CB6871_redo X 9680082 1 T C 43 1.00 63 62 14 17 31 @,,C,C.CCcc.,cCC,CccC.c.c,,..,cc point 0 missense AGG->GGG[Arg->Gly] {C43C3.1} 4363 CB6871_redo X 9703760 1 T A 224 1.00 63 62 0 23 23 @AaAAAAAAAAAAAAAAAAAAAAA point 0 nongenic -3113 upstream {F15G9.1a} 4364 CB6871_redo X 9703853 1 T C 255 1.12 63 62 0 16 16 @CCCCCCCCCcCccCCC point 0 nongenic -3020 upstream {F15G9.1a} 4365 CB6871_redo X 9774476 1 A G 255 1.00 63 62 0 31 31 @GGgggggGgGgggggGgGGggGggGGGGGGG point 0 SNP none {haw106424} 4368 CB6871_redo X 9861507 1 G T 255 1.00 63 62 0 44 44 @ttTTtTttTTtTTtTtTtTTttTttTTtTtTTTtttTtttTtTt point 0 missense,SNP AGT->ATT[Ser->Ile],none {R07B1.3},{haw106438} 4369 CB6871_redo X 9882632 1 A C 255 1.00 63 62 0 28 28 @CccCccCCCCcCCCccCCccccCccCCt point 0 nongenic,nongenic -1579 upstream,-491 upstream {F21G4.2},{R07B1.12} 4370 CB6871_redo X 9999375 1 G A 33 1.00 63 28 1 3 4 @.aAA point 0 nongenic,nongenic -1497 upstream,-262 upstream {F19C6.2a,F19C6.2b},{F19C6.1} 4371 CB6871_redo X 9999376 1 A G 88 1.00 63 28 0 4 4 @gGGg point 0 nongenic,nongenic -1496 upstream,-263 upstream {F19C6.2a,F19C6.2b},{F19C6.1} 4372 CB6871_redo X 9999591 1 A G 255 1.00 63 62 0 20 20 @GGGGGtGGgggggGgggGgG point 0 nongenic,nongenic -1281 upstream,-478 upstream {F19C6.2a,F19C6.2b},{F19C6.1} 4374 CB6871_redo X 10130976 1 T G 221 1.00 63 62 0 15 15 @GGGGGGGGGGGgGGG point 0 SNP none {haw106550} 4375 CB6871_redo X 10179285 1 C G 9 1.00 63 46 3 3 6 @...gGG point 0 five_prime_UTR none {F21A10.1b} 4379 CB6871_redo X 10290545 1 A T 28 1.00 63 62 3 4 7 @.,.Tttt point 0 nongenic,nongenic -12033 upstream,-4877 upstream {F41E7.4},{F41E7.3} 4388 CB6871_redo X 10421428 1 G A 255 1.00 63 62 0 30 30 @aaAaaaaAaaaaAAAaaaaaaaAaAAAAaa point 0 SNP none {haw106854} 4389 CB6871_redo X 10439131 1 C T 255 1.00 63 62 0 33 33 @tttTTttTTTtttttTttTtTTTTTTtttTTTT point 0 SNP none {haw106868} 4390 CB6871_redo X 10473878 1 G A 255 1.00 63 62 0 36 36 @AaAAaaAAAAAAAaaAaaAaaaAaaaaAaAAAAaaA point 0 SNP none {haw106890} 4391 CB6871_redo X 10591190 1 G T 255 1.00 63 62 0 30 30 @TTttTTtTtTTtTtTttTTtTTtTTttttt point 0 SNP none {haw106989} 4392 CB6871_redo X 10594749 1 A C 27 1.00 63 62 5 6 11 @CcCCCc..,.. point 0 nongenic,nongenic -1484 upstream,-9990 upstream {F57C7.3a},{M79.4} 4393 CB6871_redo X 10815843 1 G A 255 1.00 63 62 0 27 27 @AaAaaAAaaAAaaAAAaAaAaAaaaaA point 0 nongenic,nongenic -911 upstream,838 downstream {F31B12.1d},{F31B12.3} 4394 CB6871_redo X 10841709 1 G T 65 1.00 63 62 1 3 4 @,TtT point 0 nongenic,nongenic -8213 upstream,899 downstream {C05A9.3},{C05A9.2} 4396 CB6871_redo X 10845087 1 T C 242 1.00 63 62 0 20 20 @CCCCcCCCCCCCCCCCCCCC point 0 nongenic -485 upstream {C05A9.2} 4398 CB6871_redo X 11158111 1 T A 255 1.00 63 62 1 28 29 @aaAAAAAAaaaaaAaaaAaAAAAAAAa.A point 0 SNP none {pas45631} 4400 CB6871_redo X 11310929 1 A T 25 1.00 63 62 10 14 24 @,,t,t,,ttt,tttt,t,t,ttt, point 0 nongenic -778 upstream {F08G12.5} 4401 CB6871_redo X 11310952 1 C T 34 1.00 63 62 13 21 34 @tttt,t,t,ttt,tt,tttt,t,,,tt,,tt,,t point 0 nongenic -801 upstream {F08G12.5} 4403 CB6871_redo X 11356880 1 C T 255 1.00 63 62 0 35 35 @TttTttTTtTtTTTTtTtttTttTtTTTTtTttTt point 0 missense ACG->ATG[Thr->Met] {ZK455.7.1,ZK455.7.2} 5413 CB6871_redo X 11492873 2 X X -1000 -999.99 -1000 -1000 9 -5 4 @,,.,..,., indel -2 SNP none {uCE6-1222} 4411 CB6871_redo X 11564037 1 T A 143 1.00 63 62 1 9 10 @AAAAAAAAA. point 0 SNP none {uCE6-1225} 4412 CB6871_redo X 11600446 1 C A 255 1.00 63 62 0 32 32 @aAAAAaaAaAaAAAaAaaAAaAaAaaAAAaAA point 0 SNP none {haw107592} 4413 CB6871_redo X 11624629 1 T C 255 1.00 63 62 0 36 36 @cccCCccCccccCCCCcccCCCcCCCcccccCCCCC point 0 missense,SNP GAT->GGT[Asp->Gly],none {Y71H9A.1},{haw107616} 5415 CB6871_redo X 11654822 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @.,,.AA indel 0 nongenic,nongenic,nongenic,nongenic -1328 downstream,-3543 upstream,-3979 upstream,-960 downstream {T04F8.2.1},{T04F8.3},{T04F8.4},{T04F8.2.2} 5416 CB6871_redo X 11689187 1 X X -1000 -999.99 -1000 -1000 10 -8 2 @,,,...,,,. indel -1 SNP none {uCE6-1229} 4414 CB6871_redo X 11690021 1 A C 4 1.00 63 62 4 5 9 @,..,cCCcc point 0 nongenic,nongenic -1826 upstream,-215 upstream {C44C10.7},{C44C10.10} 4415 CB6871_redo X 11701454 1 G T 114 1.00 63 62 1 6 7 @.ttTTTt point 0 nongenic -1005 upstream {C44C10.3} 4445 CB6871_redo X 11791596 1 G C 25 1.00 63 16 3 5 8 @,,.ccCcc point 0 nongenic,nongenic -6829 upstream,-7341 upstream {C34E11.1.1},{Y102F5A.1} 4446 CB6871_redo X 11831508 1 C A 255 3.56 63 62 0 25 25 @aaAaaAAAaAAaaaAAAAaAaaaaA point 0 nongenic 4532 into {C34E11.3} 4447 CB6871_redo X 11831549 1 T C 255 2.69 63 62 0 40 40 @CccccCCcCCcccCcCccCCcCCcCcCCCCCCCCcCcCcC point 0 nongenic 4491 into {C34E11.3} 4453 CB6871_redo X 11929421 1 G A 255 1.00 63 62 0 27 27 @AaAAaaAAAaaaAaAAAaAaAAAAaaA point 0 nongenic,nongenic 250 downstream,400 downstream {F55G7.4},{F55G7.2} 4454 CB6871_redo X 11929422 1 A G 255 1.00 63 62 0 29 29 @GgGGggGGGgggGgGGGgGgGGGGggGGG point 0 nongenic,nongenic 251 downstream,399 downstream {F55G7.4},{F55G7.2} 4459 CB6871_redo X 12023120 1 C A 255 2.88 63 62 0 29 29 @AaaaAaaAAaAAAAaaAAaAAAAgaAAaA point 0 nongenic -6629 upstream {B0198.2} 4470 CB6871_redo X 12277005 1 T C 9 1.75 63 6 1 3 4 @ccc. point 0 nongenic,nongenic -1404 upstream,-3624 upstream {C04B4.6},{C04B4.1.1} 4471 CB6871_redo X 12277006 1 C T 7 1.75 63 8 1 3 4 @ttt. point 0 nongenic,nongenic -1405 upstream,-3623 upstream {C04B4.6},{C04B4.1.1} 4473 CB6871_redo X 12277112 1 A G 236 1.00 44 62 0 14 14 @GGgGGgGGGGGGGg point 0 nongenic,nongenic -1511 upstream,-3517 upstream {C04B4.6},{C04B4.1.1} 4474 CB6871_redo X 12277116 1 A T 236 1.00 63 62 0 15 15 @TTtTTtTTTTTTTtt point 0 nongenic,nongenic -1515 upstream,-3513 upstream {C04B4.6},{C04B4.1.1} 4475 CB6871_redo X 12277171 1 A T 255 1.94 63 62 0 25 25 @TTTTTTTTTtTtTTttTtTTTTtTT point 0 nongenic,nongenic -1570 upstream,-3458 upstream {C04B4.6},{C04B4.1.1} 4477 CB6871_redo X 12277226 1 C T 3 3.12 0 26 7 11 18 @,,tT..,.TTtt.TTttt point 0 nongenic,nongenic -1625 upstream,-3403 upstream {C04B4.6},{C04B4.1.1} 4479 CB6871_redo X 12277519 1 A G 13 4.56 63 62 100 110 210 @,,.Gg,G,,..GGggGG,g.GgGG,,,Gg.GGGG,G,gG,G,GGgGGGGG,GGGGGG...g,,GG,GGgg,GG,G,gGG,GG,,.G,,,,G..GGGG,. point 0 nongenic,nongenic -1918 upstream,-3110 upstream {C04B4.6},{C04B4.1.1} 4480 CB6871_redo X 12277622 1 T G 255 1.06 63 62 0 53 53 @ggGGGGgggGGGGGGggggGGGGgGgggGGggggGGGGGgggGGGGGCgGGgG point 0 nongenic,nongenic -2021 upstream,-3007 upstream {C04B4.6},{C04B4.1.1} 4484 CB6871_redo X 12277788 1 C T 3 2.25 0 10 8 20 28 @Tt,Tt,TTT,TTTTTTT,,TT,TT.TT, point 0 nongenic,nongenic -2187 upstream,-2841 upstream {C04B4.6},{C04B4.1.1} 4485 CB6871_redo X 12277811 1 A G 4 2.31 0 18 1 9 10 @gGG,gGGGGg point 0 nongenic,nongenic -2210 upstream,-2818 upstream {C04B4.6},{C04B4.1.1} 4490 CB6871_redo X 12278193 1 T G 31 9.69 12 62 0 14 14 @GGggGGGGGGGGgg point 0 nongenic,nongenic -2436 upstream,-2592 upstream {C04B4.1.1},{C04B4.6} 4492 CB6871_redo X 12278330 1 A C 3 5.75 0 2 0 23 23 @CCCCCCCCccCCCCCcCCCCttc point 0 nongenic,nongenic -2299 upstream,-2729 upstream {C04B4.1.1},{C04B4.6} 4496 CB6871_redo X 12279277 1 A C 26 7.25 63 30 4 12 16 @,.ccctT.Tc,CcCcC point 0 nongenic,nongenic -1352 upstream,-3676 upstream {C04B4.1.1},{C04B4.6} 4500 CB6871_redo X 12560995 1 T C 157 1.00 63 62 0 5 5 @ccCCC point 0 nongenic,nongenic -12995 upstream,-9395 upstream {T24D5.1},{C16D6.2} 4503 CB6871_redo X 12642762 1 A G 181 1.00 63 62 1 7 8 @,GgGGggG point 0 SNP none {haw107971} 4504 CB6871_redo X 12786146 1 G C 255 1.00 63 62 0 25 25 @CCCCcccCcccCCCCcCCcCcCCCC point 0 missense,SNP TGG->TGC[Trp->Cys],none {T22H6.2a,T22H6.2b},{haw107989} 4505 CB6871_redo X 12795967 1 C A 255 1.00 63 62 0 35 35 @AAaaaAAaAAAaAAaaAAAAaAAaAAAAaaaAaAa point 0 SNP,three_prime_UTR none,none {haw107990},{T22H6.6a,T22H6.6b} 4508 CB6871_redo X 12906518 1 C T 255 1.00 63 62 0 31 31 @ttttttTTTttTtTTTTtTTTTTTTTtTTTt point 0 nongenic,nongenic -1234 upstream,-21607 upstream {C34E7.1.2},{K02A4.2.1} 4509 CB6871_redo X 13006485 1 T C 12 1.00 63 62 3 3 6 @...CCc point 0 nongenic -1929 upstream {F11C1.6a.1,F11C1.6b.2} 4510 CB6871_redo X 13034301 1 T A 255 1.00 63 62 0 19 19 @aAAaAaAAaaaaaaAaaaA point 0 SNP none {haw108272} 4511 CB6871_redo X 13041027 1 A C 51 1.00 63 62 3 5 8 @CccCC... point 0 SNP none {haw108284} 4515 CB6871_redo X 13235302 1 T A 28 1.25 63 0 8 11 19 @,AAA,,a,aa,,A.aa,aa point 0 nongenic,nongenic -2041 upstream,-422 upstream {K08H2.3},{K08H2.2} 4516 CB6871_redo X 13261606 1 C G 6 1.00 63 4 2 3 5 @,.GGG point 0 nongenic,nongenic -815 upstream,785 downstream {K09A11.1},{K08H2.10} 4517 CB6871_redo X 13261607 1 G C 5 1.00 63 6 2 3 5 @,.CCC point 0 nongenic,nongenic -814 upstream,786 downstream {K09A11.1},{K08H2.10} 4518 CB6871_redo X 13384402 1 T A 255 1.00 63 62 0 23 23 @aAAAAAaaAAaaAaAaaaAaaAA point 0 SNP none {haw108496} 4521 CB6871_redo X 13437208 1 C T 177 3.62 63 62 0 8 8 @tttttttt point 0 nongenic,nongenic -5688 upstream,832 into {C29F7.5},{C29F7.6} 4522 CB6871_redo X 13480349 1 T A 255 1.00 63 62 0 40 40 @aAaAaaAaAAaaAACAAAAAAAAaAAAaAAaaaAaAAaaA point 0 missense,SNP AAC->ATC[Asn->Ile],none {F15A2.4},{haw108526,uCE6-1345} 5434 CB6871_redo X 13481140 1 X X -1000 -999.99 -1000 -1000 5 -4 1 @,,.,, indel -1 SNP none {uCE6-1346} 4523 CB6871_redo X 13481141 1 A G 10 2.00 63 48 1 4 5 @GgGG, point 0 SNP none {uCE6-1346} 5435 CB6871_redo X 13656725 3 X X -1000 -999.99 -1000 -1000 12 -9 3 @,,,,,,.,,,.. indel -3 SNP none {uCE6-1357} 5436 CB6871_redo X 13708213 0 X X -1000 -999.99 -1000 -1000 1 1 2 @,Ggg indel 0 nongenic,nongenic 430 downstream,654 downstream {K02D3.2},{K02D3.1} 4537 CB6871_redo X 13737752 1 G T 255 1.00 63 62 0 31 31 @TTttTtTTTtTTtTTtttttTTttTTTTtTt point 0 SNP none {haw108674,uCE6-1361} 4546 CB6871_redo X 14118935 1 A G 102 1.12 63 62 0 7 7 @GGGGGgG point 0 nongenic,nongenic -8867 upstream,1926 into {F28H6.4},{F28H6.6} 4548 CB6871_redo X 14229404 1 A T 155 1.00 63 62 0 7 7 @tttTttt point 0 nongenic,nongenic 185 downstream,921 downstream {K04C1.6},{K06G5.2} 4549 CB6871_redo X 14248169 1 C A 255 1.00 63 62 0 33 33 @AaAAaaaaAaAAAaaaaaAAaAAAaAaAaaaAa point 0 missense GAC->GAA[Asp->Glu] {K04C1.5} 4552 CB6871_redo X 14374968 1 A T 18 1.00 63 62 3 4 7 @TTTt,.. point 0 nongenic -15981 upstream {K04G11.5} 4553 CB6871_redo X 14375235 1 T C 115 1.00 63 62 0 5 5 @cccCc point 0 SNP none {uCE6-1407} 4554 CB6871_redo X 14379009 1 T C 187 7.88 63 62 0 10 10 @CcccccCCCc point 0 nongenic,nongenic -1757 upstream,-4162 upstream {Y60A9A.1},{Y60A9.3} 4556 CB6871_redo X 14381923 1 G A 255 1.00 63 62 0 34 34 @aAAaAAaAaAAaAAaaAAaaAaAaaAAAaAaaAA point 0 SNP none {haw109439} 4557 CB6871_redo X 14384664 1 C G 12 5.00 33 12 0 4 4 @gggg point 0 nongenic 880 downstream {Y60A9.3} 4558 CB6871_redo X 14384687 1 A C 43 7.88 33 42 0 8 8 @cccccccc point 0 nongenic 903 downstream {Y60A9.3} 4561 CB6871_redo X 14461134 1 A T 82 1.38 63 6 4 5 9 @Ttttt.,,. point 0 nongenic,nongenic,nongenic -1643 upstream,-5707 upstream,865 into {M163.6},{Y66C5A.1},{Y66C5A.2} 4562 CB6871_redo X 14510694 1 G A 218 4.12 63 62 0 16 16 @aaaaaaaaaaaaaaaa point 0 nongenic,nongenic -6932 upstream,532 downstream {M163.1},{D1025.3} 4563 CB6871_redo X 14510701 1 T G 217 4.12 63 62 0 16 16 @gggggggggggggggg point 0 nongenic,nongenic -6939 upstream,525 downstream {M163.1},{D1025.3} 4564 CB6871_redo X 14573707 1 A G 21 1.00 63 24 3 4 7 @,,.GGGG point 0 nongenic,nongenic,nongenic -4168 upstream,1068 into,4912 into {C44H4.2},{C44H4.1},{H01A20.2} 4565 CB6871_redo X 14574515 1 C A 14 1.00 63 60 1 3 4 @.aAA point 0 missense ACC->AAC[Thr->Asn] {C44H4.1} 4566 CB6871_redo X 14577774 1 T A 255 1.00 63 62 0 25 25 @aaAaaaaaAAaaAaaAaaAaAaaaA point 0 nongenic,nongenic -101 upstream,6732 into {C44H4.2},{H01A20.2} 4567 CB6871_redo X 14595719 1 A T 21 1.00 63 62 6 8 14 @TttTTTt,.G,.,. point 0 three_prime_UTR none {C44H4.8} 4568 CB6871_redo X 14613805 1 C A 255 1.00 63 62 0 29 29 @AaAAaAAAAaAAaAAAaaaaAaaaAaaaa point 0 ncRNA,silent none,CGA->AGA[Arg->Arg] {F54E4.1b},{F54E4.1a} 4569 CB6871_redo X 14637664 1 A C 255 1.00 63 62 0 13 13 @CCCCCCCCCccCC point 0 nongenic -1335 upstream {F54E4.3} 4579 CB6871_redo X 14767044 1 C G 255 1.00 63 62 0 35 35 @GGGGGGGGGgGggGgggGGGGgggGGGggGGgggg point 0 missense GAA->CAA[Glu->Gln] {Y16B4A.2} 4587 CB6871_redo X 14913406 1 G T 255 1.00 63 62 0 31 31 @tTtttTttttttTTtTTTTTttTTTTtTTtt point 0 SNP none {haw110147} 4590 CB6871_redo X 14921904 1 G A 255 1.00 63 62 0 14 14 @aaAAaAAaaAAAAA point 0 SNP none {haw110159} 4591 CB6871_redo X 14921912 1 A G 255 1.00 63 62 0 12 12 @gGGggGGGGGgt point 0 SNP none {haw110160} 4592 CB6871_redo X 14921945 1 T C 11 1.00 63 32 2 10 12 @CCCC,.cccccc point 0 nongenic,nongenic -16762 upstream,1864 into {Y70D2A.2},{Y70D2A.1} 4594 CB6871_redo X 14945493 1 T C 255 1.00 63 62 0 15 15 @CCcccCcCcCCcccc point 0 SNP none {haw110192} 4595 CB6871_redo X 14962448 1 A T 255 1.00 63 62 0 24 24 @ttttGttTTtTTTTtttTTTtTtt point 0 nongenic,nongenic -393 upstream,-995 upstream {F45B8.2},{F45B8.3} 4602 CB6871_redo X 15226797 1 G T 255 1.06 63 62 0 27 27 @ttTTTTtTTTtttTTtTTtTtTTTTTt point 0 missense,SNP CCT->CAT[Pro->His],none {H03A11.2},{haw110591} 4603 CB6871_redo X 15226859 1 C T 236 5.50 62 62 31 36 67 @tt,TtTTt,Tt,ttt,,,T,T,,,t,,,,,T,,,,tt,t,,,,,.t,,,t,tTttt,tTttTTTTTt point 0 silent AAG->AAA[Lys->Lys] {H03A11.2} 4604 CB6871_redo X 15252247 1 A T 255 1.00 63 62 0 31 31 @TttTTTtTTTTTTTttTtTttTTTtTTtTTT point 0 SNP none {haw110617,snp_F46F2[2]} 4606 CB6871_redo X 15446435 1 T C 3 1.00 63 14 1 4 5 @CCCC. point 0 nongenic -215 upstream {R03A10.5} 4607 CB6871_redo X 15447753 1 C T 191 1.19 63 62 0 10 10 @TTTTTTTTTT point 0 nongenic,nongenic -14011 upstream,1103 into {R03A10.6.1},{R03A10.5} 4613 CB6871_redo X 15519431 1 T C 3 1.00 63 30 2 2 4 @,,cc point 0 ncRNA none {H30A04.1c} 4614 CB6871_redo X 15520197 1 A G 180 1.00 63 62 1 8 9 @,ggGgGGGG point 0 ncRNA none {H30A04.1c} 4620 CB6871_redo X 15722216 1 A G 255 1.00 63 62 0 29 29 @GGgGgGgggGggGGGGGGgGGGggGgGgG point 0 nongenic,nongenic -3834 upstream,1025 into {ZK662.4.1,ZK662.4.2},{ZK662.5} 4621 CB6871_redo X 15747936 1 A G 18 1.00 63 62 11 13 24 @........GG.GGGG.GG.GGGGG point 0 nongenic,nongenic 1010 into,468 downstream {ZK678.4},{ZK678.3} 4622 CB6871_redo X 15747972 1 T A 65 2.88 63 62 10 24 34 @AA.AAAA.AA.AAAAAAAAAAAAAAAA....... point 0 ncRNA none {ZK678.t2} 4623 CB6871_redo X 15747994 1 C G 255 7.50 63 62 0 14 14 @GGGggggggggggg point 0 ncRNA none {ZK678.t2} 4624 CB6871_redo X 15747996 1 A G 255 7.50 63 62 0 14 14 @GGGggggggggggg point 0 ncRNA none {ZK678.t2} 4627 CB6871_redo X 15808016 1 C T 3 9.56 0 0 17 20 37 @.T.,,T,.TTTTT,TtTT,tTtTTT.,,T,,,,,tN, point 0 nongenic,nongenic -3763 upstream,-3921 upstream {Y7A5A.11},{Y7A5A.7} 4642 CB6871_redo X 15836084 1 A G 255 1.38 63 62 0 16 16 @GGGGGGGGGGGGGggg point 0 nongenic,nongenic -5408 upstream,2112 into {F59F4.2},{F59F4.1} 4643 CB6871_redo X 15836927 1 T C 255 1.00 63 62 0 26 26 @ccCcCCccCCccCCCcCCcccCcCcc point 0 missense ACA->GCA[Thr->Ala] {F59F4.1} 4644 CB6871_redo X 15904379 1 C A 255 1.00 63 62 0 32 32 @AAaAaAaAaaAaAAaaAAaaaaaaAAaAaaaA point 0 nongenic,nongenic -16871 upstream,-6178 upstream {F53H4.3},{F31B9.1} 4645 CB6871_redo X 15904380 1 A C 255 1.00 63 62 0 30 30 @cCcCcCccCcCCccCCccccccCCcCcccC point 0 SNP none {haw111415} 4646 CB6871_redo X 15904862 1 T A 246 1.00 63 62 0 9 9 @AaaAAAAAa point 0 nongenic,nongenic -17354 upstream,-5695 upstream {F53H4.3},{F31B9.1} 4647 CB6871_redo X 15945619 1 A T 255 1.00 63 62 0 31 31 @ttTTtTTTTTTTtTTTTTTTtTtTtTTtTtT point 0 SNP none {haw111469} 4648 CB6871_redo X 15945743 1 G T 159 1.00 63 62 0 7 7 @TTTttTT point 0 nongenic,nongenic,nongenic -6498 upstream,-6550 upstream,1815 into {E03G2.2},{E03G2.4},{E03G2.3} 4649 CB6871_redo X 15945744 1 G T 161 1.00 63 62 0 7 7 @TTTttTT point 0 nongenic,nongenic,nongenic -6499 upstream,-6549 upstream,1816 into {E03G2.2},{E03G2.4},{E03G2.3} 4650 CB6871_redo X 15945755 1 A T 104 1.00 63 62 0 5 5 @TtTtT point 0 nongenic,nongenic,nongenic -6510 upstream,-6538 upstream,1827 into {E03G2.2},{E03G2.4},{E03G2.3} 4651 CB6871_redo X 16010512 1 A T 83 1.00 63 54 0 4 4 @tttt point 0 nongenic -13656 upstream {C09G1.4} 4652 CB6871_redo X 16010916 1 G T 255 1.00 63 62 0 31 31 @ttTTTTtttTTtTtttTTTtTTTTtttTTTt point 0 SNP none {haw111536} 4653 CB6871_redo X 16010919 1 C A 255 1.00 63 62 0 31 31 @AAAaaaAAaAaaaAAAaAAAAaaaAAAaAAA point 0 nongenic -14063 upstream {C09G1.4} 4654 CB6871_redo X 16029144 1 A C 136 1.00 63 62 0 5 5 @ccccc point 0 nongenic -1579 upstream {B0395.2} 5447 CB6871_redo X 16071563 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @,,,,,CC indel 0 nongenic,nongenic -1258 upstream,-4181 upstream {C30F2.1},{T27A8.4} 4656 CB6871_redo X 16073852 1 T A 255 1.00 63 62 0 35 35 @AAAAaAAAaaAaAaAAaAAaaaAAAAAaAAAaAAA point 0 SNP none {haw111571,pas35293} 4657 CB6871_redo X 16083037 1 C A 17 1.00 63 12 2 2 4 @Aa.. point 0 nongenic,nongenic,nongenic,nongenic -10947 upstream,-7450 upstream,2096 into,667 into {C30F2.5},{C30F2.4},{C30F2.2},{C30F2.3} 4660 CB6871_redo X 16102626 1 T G 255 1.00 63 62 0 29 29 @GgGgGgGGggGGgGgGGGGGgGgggGggg point 0 SNP none {CE6-235,haw111583} 4661 CB6871_redo X 16120770 1 G A 39 1.00 63 62 2 3 5 @aAA.. point 0 nongenic 2900 into {ZK1073.2} 4662 CB6871_redo X 16140449 1 T C 255 1.00 63 62 0 23 23 @CcCccCcCccCcCcCccccCCCC point 0 SNP,three_prime_UTR none,none {haw111604,pas34987},{F09C8.2.1} 4671 CB6871_redo X 16224808 1 G C 13 1.31 63 4 1 3 4 @,cCC point 0 nongenic -4571 upstream {F23A7.5} 4682 CB6871_redo X 16255156 1 G T 255 1.00 63 62 0 16 16 @tTttTtTTtTTtTtTT point 0 nongenic,nongenic 226 into,398 into {W10G6.2a.2,W10G6.2b},{W10G6.2a.1} 4683 CB6871_redo X 16255668 1 T G 255 6.19 63 62 0 12 12 @ggGggGGGGGGG point 0 nongenic,nongenic 738 into,910 into {W10G6.2a.2,W10G6.2b},{W10G6.2a.1} 4684 CB6871_redo X 16255669 1 T C 251 6.75 63 62 0 11 11 @cCccCCCCCCC point 0 nongenic,nongenic 739 into,911 into {W10G6.2a.2,W10G6.2b},{W10G6.2a.1} 4685 CB6871_redo X 16255728 1 T C 174 8.44 63 62 0 12 12 @CCCCCCCCCCCC point 0 nongenic,nongenic 798 into,970 into {W10G6.2a.2,W10G6.2b},{W10G6.2a.1} 4686 CB6871_redo X 16255860 1 T A 255 1.00 63 62 0 24 24 @AAaaAaAaaaaaAAAaAaaaAAAA point 0 SNP none {haw111737} 5453 CB6871_redo X 16256026 0 X X -1000 -999.99 -1000 -1000 3 2 5 @,..cCCCc indel 0 nongenic,nongenic -1095 downstream,-1267 downstream {W10G6.2a.2,W10G6.2b},{W10G6.2a.1} 4690 CB6871_redo X 16460133 1 C A 255 1.00 63 62 0 39 39 @AAAAAaaaAAAAaAaAAAaAAaAAaaaaAAaaaAAaAaa point 0 SNP none {haw111863} 4691 CB6871_redo X 16460180 1 C A 255 1.00 63 62 0 27 27 @AaaAaAaaAaaAAaAaaAaaAAaaAaA point 0 SNP none {haw111864} 4697 CB6871_redo X 16523344 1 G T 42 2.94 63 62 7 10 17 @,T,ttTTT..T.Ttt.. point 0 nongenic -13407 upstream {T27B1.2.1} 4703 CB6871_redo X 16608719 1 G A 88 1.00 63 62 4 7 11 @.,..aaAaAAA point 0 nongenic,nongenic,nongenic -4646 upstream,-6084 upstream,723 into {C06G1.4.1},{F59C12.4},{F59C12.3} 4706 CB6871_redo X 16687504 1 A G 140 1.50 63 62 6 13 19 @,.,.,,ggggggggGgggg point 0 nongenic,nongenic -1879 upstream,825 into {F22H10.4},{F22H10.5} 4707 CB6871_redo X 16787261 1 A T 255 1.00 63 62 0 36 36 @TtTTtTtTTTtttTtttttTtttTttTTtTtTTtTT point 0 SNP none {haw111929} 4708 CB6871_redo X 16817032 1 T C 255 1.00 63 62 0 23 23 @CcCcCCccCcccccccCcCCCCC point 0 missense AAA->GAA[Lys->Glu] {F41G4.3a,F41G4.3b} 4715 CB6871_redo X 16981399 1 A C 115 0.00 63 62 0 5 5 @CCCCC point 0 nongenic,nongenic -20248 upstream,-5351 upstream {K02H8.1,K02H8.1b,K02H8.1c},{F52G3.5} 4716 CB6871_redo X 16981415 1 T C 201 1.00 63 62 0 13 13 @CCCCCCCCCCCCC point 0 SNP none {haw111956} 4717 CB6871_redo X 17025320 1 A T 155 1.00 63 62 0 5 5 @ttTTT point 0 nongenic,nongenic,nongenic -4597 upstream,1098 into,3583 into {F35B3.4},{F35B3.5b},{F35B3.5a} 4718 CB6871_redo X 17047302 1 C T 255 1.00 63 62 1 14 15 @ttTTTttTttTtTT, point 0 missense GAG->AAG[Glu->Lys] {C30G4.3.1,C30G4.3.2} 4719 CB6871_redo X 17047309 1 T C 223 1.00 63 62 0 9 9 @ccCcCCCcc point 0 silent GAA->GAG[Glu->Glu] {C30G4.3.1,C30G4.3.2} 4720 CB6871_redo X 17047323 1 G T 212 1.00 63 62 0 9 9 @TTttTTTTT point 0 missense CAG->AAG[Gln->Lys] {C30G4.3.1,C30G4.3.2} 4723 CB6871_redo X 17105478 1 G C 255 1.00 63 62 0 25 25 @CcCccccCCcccCccccCccccCCc point 0 nongenic -690 upstream {C08A9.8} 4724 CB6871_redo X 17168879 1 A G 158 1.00 63 62 0 7 7 @GGGGGGG point 0 nongenic -11005 upstream {T23C6.5} 5458 CB6871_redo X 17228978 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,,gggg indel 0 inframe none {T25G12.6} 4740 CB6871_redo X 17444362 1 A C 42 3.44 27 42 0 7 7 @CccCCCc point 0 nongenic -7944 upstream {C36E6.2} 4747 CB6871_redo X 17621416 1 A T 255 1.00 63 62 0 15 15 @TTtttttTtTtTtTt point 0 SNP none {haw112084} 4748 CB6871_redo X 17715334 1 G A 255 1.00 63 62 0 39 39 @aaAaaAAAAAAaaAaaaAaaAaAAAaaaAaaAaAaAaaa point 0 nongenic,nongenic,nongenic 455 into,457 into,589 downstream {cTel55X.1a.2,cTel55X.1b},{cTel55X.1a.1},{6R55.2}