id mutant_strain dna start length reference_base sample_base consensus_score loci_multiplicity mapping_quality neighbor_quality number_wildtype_reads number_variant_reads sequencing_depth sample_reads variant_type indel_size classes descriptions parent_features 8 CB6878_redo I 200948 1 A T 183 1.00 63 62 0 12 12 @tttttttttttt point 0 SNP none {haw293} 9 CB6878_redo I 200949 1 C T 183 1.00 63 62 0 12 12 @tttttttttttt point 0 SNP none {haw294} 10 CB6878_redo I 221369 1 A G 41 1.00 63 62 3 5 8 @,,,GGGgG point 0 silent ACT->ACC[Thr->Thr] {Y48G1BL.6} 13 CB6878_redo I 229675 1 A G 33 1.00 63 62 26 36 62 @.GGg.,GG,gG,,ggg.gg..,..gG,,G.G,G.,G,g,.GgGggGGGGg.,G,ggG,GgG. point 0 nongenic,nongenic -8100 upstream,586 into {Y48G1BL.6},{Y48G1BM.6} 15 CB6878_redo I 278134 1 A C 27 1.00 63 28 1 3 4 @,ccc point 0 nongenic,nongenic -18976 upstream,-1985 upstream {Y48G1BR.1},{C53D5.3} 19 CB6878_redo I 316117 1 T G 255 1.00 63 62 0 27 27 @GgGGGGGGGGGGGGggGGGGGGGgGGG point 0 SNP none {haw435,uCE1-530} 30 CB6878_redo I 361325 1 C A 255 1.00 63 62 0 22 22 @AaaAaAAaAAAAAAAaaaAaAa point 0 missense AAG->AAT[Lys->Asn] {R119.1} 31 CB6878_redo I 369897 1 T C 196 1.19 63 62 0 10 10 @ccccccccCc point 0 nongenic 1525 into {R119.2} 32 CB6878_redo I 393885 1 G C 29 1.00 63 0 1 5 6 @CCC.cc point 0 nongenic,nongenic -5008 upstream,530 into {Y50C1A.1},{R119.5} 34 CB6878_redo I 393889 1 A C 5 1.00 63 0 1 5 6 @CCC.cc point 0 nongenic,nongenic -5004 upstream,526 into {Y50C1A.1},{R119.5} 162377 CB6878_redo I 670357 137 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3923 to 4060 bp into {Y18H1A.14} 50 CB6878_redo I 732640 1 T G 255 1.00 63 62 0 44 44 @GgggGgggGggGGGggGGGgGggggggGGgGgggGggGGGggGG point 0 nongenic 658 into {Y18H1A.15} 52 CB6878_redo I 774905 1 G T 13 1.00 63 0 2 3 5 @,,ttT point 0 nongenic,nongenic,nongenic -28464 upstream,1442 into,1452 into {ZC123.3},{T06A4.1b},{T06A4.1a} 64 CB6878_redo I 968802 1 G C 255 1.06 63 62 0 45 45 @CCccCCCCCcCCCcCcCCCCccccCcCcCCccCcCccCCCccccC point 0 nongenic,nongenic,nongenic,nongenic -11426 upstream,627 into,879 downstream,906 downstream {Y34D9B.1a},{F54A5.2},{F54A5.3a},{F54A5.3d} 162378 CB6878_redo I 1027850 55 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2008 to 2063 bp into {Y34D9A.1} 69 CB6878_redo I 1051604 1 A T 255 1.94 63 62 0 30 30 @tttTttTttTTtttttTTTTtttTtTtTTT point 0 nongenic,nongenic,nongenic 561 into,679 into,889 downstream {Y34D9A.8a},{Y34D9A.8b},{Y34D9A.6} 72 CB6878_redo I 1079698 1 G C 3 2.00 0 0 0 5 5 @CCTCC point 0 nongenic,nongenic -461 upstream,-6271 upstream {R06A10.3},{R06A10.1} 73 CB6878_redo I 1079700 1 T C 12 2.00 0 2 0 4 4 @CCCC point 0 nongenic,nongenic -463 upstream,-6269 upstream {R06A10.3},{R06A10.1} 79 CB6878_redo I 1100872 1 T G 138 1.00 63 62 0 5 5 @ggggG point 0 nongenic,nongenic -5073 upstream,-6711 upstream {R06A10.4},{ZK993.2} 80 CB6878_redo I 1130323 1 T G 19 1.00 63 2 0 5 5 @GGGGG point 0 nongenic 1417 into {ZK993.1} 81 CB6878_redo I 1130326 1 T G 4 1.00 63 0 1 4 5 @GGG,g point 0 nongenic 1414 into {ZK993.1} 86 CB6878_redo I 1130654 1 C G 3 1.00 63 26 2 3 5 @,,gag point 0 nongenic 1086 into {ZK993.1} 88 CB6878_redo I 1142103 1 C A 255 1.00 63 62 0 35 35 @AAAAAAAaaaAAaaAAaaAAAAAaAAAaAAAAAAA point 0 missense,SNP GGT->TGT[Gly->Cys],none {Y48G8AL.10},{haw1570} 99 CB6878_redo I 1302563 1 G T 243 1.69 63 62 1 13 14 @,ttTTtttTTTTTT point 0 nongenic -3012 upstream {K12C11.4} 162379 CB6878_redo I 1318210 61 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 12634 to 12695 bp into {K12C11.4} 162380 CB6878_redo I 1437262 60 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 982 to 1042 bp into {Y92H12BR.8} 162381 CB6878_redo I 1440197 62 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3917 to 3979 bp into {Y92H12BR.8} 162 CB6878_redo I 1719436 1 T A 255 1.00 63 62 0 27 27 @AaaaAaaAAaaaaaAaaaaAAaAaaaA point 0 SNP none {haw2604} 165 CB6878_redo I 1766667 1 C A 59 1.00 63 62 5 5 10 @,,aa,A,,aA point 0 SNP none {haw2683} 166 CB6878_redo I 1864004 1 T C 190 1.25 63 62 0 12 12 @cccccccCcccc point 0 SNP none {haw2851} 174 CB6878_redo I 1952117 1 C A 255 1.19 63 62 0 15 15 @AAAaaaaaaaaAAAA point 0 nongenic,nongenic -9549 upstream,1519 into {Y51F10.11},{Y51F10.10} 175 CB6878_redo I 2033983 1 A G 174 1.00 63 62 4 11 15 @,.,g,ggggGGgGgG point 0 nongenic,nongenic 32 downstream,401 downstream {Y20F4.2},{Y20F4.4} 176 CB6878_redo I 2033985 1 G A 206 1.00 63 62 2 12 14 @,a,aaaaAAaAaAa point 0 nongenic,nongenic 34 downstream,399 downstream {Y20F4.2},{Y20F4.4} 179 CB6878_redo I 2211874 1 T C 48 1.00 63 62 0 4 4 @CCcc point 0 nongenic -4226 upstream {W03F11.5} 180 CB6878_redo I 2379643 1 C T 214 1.00 63 62 1 10 11 @TtTTtTTttT, point 0 missense,SNP ATG->ATA[Met->Ile],none {Y39G10AR.17},{snp_Y39G10AR[4]} 184 CB6878_redo I 2464364 1 A C 14 1.00 63 4 2 5 7 @C.Cc.cc point 0 nongenic,nongenic -901 upstream,275 into {T16H5.1a,T16H5.1b.2},{T16H5.1b.1} 185 CB6878_redo I 2496130 1 C G 3 1.00 63 0 1 3 4 @G,gg point 0 nongenic,nongenic -2004 upstream,1243 into {Y23H5B.5},{Y23H5B.6} 190 CB6878_redo I 2554859 1 A G 12 1.00 63 0 0 4 4 @gggg point 0 nongenic,nongenic,nongenic -3267 upstream,-3441 upstream,1765 into {Y23H5B.9},{C55C2.4},{Y23H5B.1} 191 CB6878_redo I 2554862 1 C G 12 1.00 63 2 0 4 4 @gggg point 0 nongenic,nongenic,nongenic -3270 upstream,-3438 upstream,1768 into {Y23H5B.9},{C55C2.4},{Y23H5B.1} 192 CB6878_redo I 2554864 1 C G 13 1.00 63 0 0 5 5 @ggggg point 0 nongenic,nongenic,nongenic -3272 upstream,-3436 upstream,1770 into {Y23H5B.9},{C55C2.4},{Y23H5B.1} 193 CB6878_redo I 2568367 1 C T 255 1.00 63 62 0 22 22 @TTttTTTTTTTTTtTttttTTt point 0 nongenic -393 upstream {C55C2.1} 194 CB6878_redo I 2568368 1 G A 255 1.00 63 62 0 21 21 @AaaAAAAAAAAAaAaaaaAAa point 0 nongenic -392 upstream {C55C2.1} 195 CB6878_redo I 2579329 1 A T 255 1.00 63 62 0 18 18 @TtttTtTTttTttTtTTt point 0 nongenic -3307 upstream {C55C2.5a,C55C2.5b,C55C2.5c} 197 CB6878_redo I 2710697 1 T C 255 1.00 63 62 0 24 24 @ccccCCCCCCcCCcccCCccCcCc point 0 SNP none {haw4255} 199 CB6878_redo I 2764493 1 C A 255 1.00 63 62 0 20 20 @aaaaaaAaaAAaaAAaaAaa point 0 nongenic,nongenic,nongenic,nongenic,nongenic -10420 upstream,-3451 upstream,3175 into,3307 into,3321 into {Y71F9B.1},{Y71F9B.9b.1},{Y71F9B.10a.2},{Y71F9B.10b},{Y71F9B.10a.1} 200 CB6878_redo I 2777373 1 C G 234 1.00 63 62 0 13 13 @GgGgGGGGGGGgG point 0 five_prime_UTR,silent none,GCG->GCC[Ala->Ala] {Y71F9B.13c},{Y71F9B.13a,Y71F9B.13b} 201 CB6878_redo I 2869806 1 C T 255 1.00 63 62 0 16 16 @tttTttTTTTTTTTTT point 0 nongenic 431 downstream {Y71F9AL.10} 202 CB6878_redo I 2903523 1 T C 6 1.00 63 44 2 4 6 @.C,ccc point 0 nongenic,nongenic -73 upstream,516 downstream {Y71F9AL.4},{Y71F9AL.5} 203 CB6878_redo I 2913541 1 C T 250 1.00 63 62 0 13 13 @TTtTTTtTtTTtt point 0 nongenic,nongenic,nongenic -1635 upstream,5814 into,5819 into {Y71F9AL.2},{Y71F9AL.18.2},{Y71F9AL.18.1} 213 CB6878_redo I 3236118 1 A C 14 1.00 63 2 0 4 4 @Cccc point 0 nongenic 2727 into {Y54E10A.2} 215 CB6878_redo I 3258597 1 A G 7 7.50 63 6 2 2 4 @GG.. point 0 nongenic -1274 upstream {Y44E3B.2} 216 CB6878_redo I 3258598 1 G T 7 7.50 63 6 2 2 4 @TT.. point 0 nongenic -1273 upstream {Y44E3B.2} 217 CB6878_redo I 3259013 1 C T 3 6.69 0 10 3 14 17 @,,T,TTTTTTTTTTTTT point 0 nongenic -858 upstream {Y44E3B.2} 220 CB6878_redo I 3314629 1 C T 255 1.00 63 62 0 17 17 @TTTTTtttTTTTTTTTT point 0 nongenic -7162 upstream {Y44E3A.2} 224 CB6878_redo I 3529472 1 C T 255 1.00 63 62 0 35 35 @TTTTTTTTtTTTTtTtTTTTTtTtTtttTTTTTTt point 0 nongenic,nongenic,nongenic -4523 upstream,-4879 upstream,487 into {Y47G6A.5a},{Y47G6A.30},{Y47G6A.19a,Y47G6A.19b,Y47G6A.19c} 228 CB6878_redo I 3766435 1 C A 29 1.00 63 62 5 7 12 @a,a.,aa.AA,A point 0 nongenic,nongenic -3247 upstream,-7359 upstream {ZK770.1},{ZK770.3.1} 229 CB6878_redo I 3885008 1 A G 255 1.00 63 62 0 17 17 @GGGGggGgGGGGGGGGg point 0 SNP none {haw5911} 230 CB6878_redo I 3885020 1 A G 242 1.00 63 62 0 14 14 @gGgGGGGGGGGgGG point 0 SNP none {haw5912} 231 CB6878_redo I 3895866 1 C T 209 1.94 63 62 8 27 35 @ttTtTT,tt,,T,tTtt,t,T,Ttttttt,TTttT point 0 missense GGC->GAC[Gly->Asp] {C50F2.5} 232 CB6878_redo I 3929759 1 G C 71 1.00 63 62 1 4 5 @,cCcC point 0 nongenic,nongenic -1072 upstream,-1869 upstream {T21E3.2},{T20F5.7} 233 CB6878_redo I 3929760 1 C T 104 1.00 63 62 0 4 4 @tTtT point 0 nongenic,nongenic -1071 upstream,-1870 upstream {T21E3.2},{T20F5.7} 236 CB6878_redo I 3935098 1 T C 218 1.19 63 62 0 11 11 @CCCCCCCCccC point 0 nongenic,nongenic 184 downstream,305 downstream {T21E3.3},{T21E3.1} 237 CB6878_redo I 3935121 1 A C 231 1.69 63 62 0 12 12 @CCccCCCCCCCC point 0 nongenic,nongenic 161 downstream,328 downstream {T21E3.3},{T21E3.1} 238 CB6878_redo I 3935148 1 G C 151 1.69 63 62 0 8 8 @CCCCCCCC point 0 nongenic,nongenic 134 downstream,355 downstream {T21E3.3},{T21E3.1} 239 CB6878_redo I 3990146 1 T C 130 3.75 63 62 72 90 162 @CCCC,,,,,CC,C.C.C,C,CC,CCCCCcCc,CCC,C,,,C,,,,,CC,,CC,cCCC,.CCCcc,C,,C,,C,,,,CC,C,c,C,cC,CCcC,c,C,,, point 0 nongenic -5564 upstream {F28H1.1} 240 CB6878_redo I 3990323 1 T C 144 3.00 63 62 59 196 255 @C.cCCc,CCCc,.CCCcc,CCCCCccCCCcCCCCCCCcCCc.ccccCCCCCc.C,CCCCcCCCC,CccC,C,.,CCCCC,CcCCC,CCCcCCc..CCC, point 0 nongenic -5387 upstream {F28H1.1} 241 CB6878_redo I 3990559 1 T C 18 2.62 63 62 61 180 241 @.cc.C,ccccc.ccc.cccc.cccCccc...c.cc,ccccc.ccccCc.cccc.cccccC,ccccccc,cc.cccc.CCccccccc.c.cccccc.,c. point 0 nongenic -5151 upstream {F28H1.1} 244 CB6878_redo I 4119099 1 C A 255 1.00 63 62 0 20 20 @aAAaAaaaaaAAAAaAaaaA point 0 nongenic,nongenic -4382 upstream,935 downstream {H31G24.1},{H31G24.3} 245 CB6878_redo I 4127917 1 G A 255 1.00 63 62 0 27 27 @aaAaaaAaaAAAaAAAAaAAaaAAaAA point 0 SNP none {haw6028} 249 CB6878_redo I 4269277 1 C T 255 1.00 63 62 0 27 27 @ttTTTTtTTTtTtTTTTTTTtttTtTt point 0 missense CGA->CAA[Arg->Gln] {C43E11.10} 252 CB6878_redo I 4407953 1 C T 255 1.00 63 62 0 31 31 @TTTTtTtTttTtTTttTTtTTtttTTTtTtt point 0 nongenic -1739 upstream {T21E12.2} 254 CB6878_redo I 4476753 1 C A 183 1.00 63 62 0 12 12 @aaaaaaaaaaaa point 0 SNP none {haw6315} 260 CB6878_redo I 4494568 1 T C 24 1.00 63 24 3 5 8 @CcCcc... point 0 nongenic,nongenic,nongenic -824 upstream,13330 into,2867 into {T01A4.1a},{T01A4.1d},{T01A4.1c} 261 CB6878_redo I 4494569 1 C A 25 1.00 63 24 3 5 8 @AaAaa... point 0 nongenic,nongenic,nongenic -823 upstream,13331 into,2868 into {T01A4.1a},{T01A4.1d},{T01A4.1c} 277 CB6878_redo I 4543841 1 A G 108 2.69 50 62 5 9 14 @,..,,GGGGGGGGG point 0 nongenic,nongenic -4132 upstream,-6637 upstream {Y119C1B.9},{Y119C1B.3} 297 CB6878_redo I 4734614 1 C A 255 1.00 63 62 0 18 18 @AAAAAAaAAaaaAaaAaa point 0 missense TCC->TAC[Ser->Tyr] {C10H11.3} 306 CB6878_redo I 5009419 1 T G 255 1.00 63 62 0 15 15 @ggggGGGGgGgggGG point 0 nongenic 631 into {F54C1.1} 308 CB6878_redo I 5032338 1 C T 159 1.31 63 62 0 6 6 @TtTtTT point 0 nongenic,nongenic,nongenic,nongenic,nongenic -3453 upstream,3667 into,4632 into,5184 into,8450 into {C46H11.4b},{C46H11.4f},{C46H11.4e},{C46H11.4c},{C46H11.4d} 317 CB6878_redo I 5189090 1 A C 8 1.00 63 34 1 3 4 @C,cc point 0 nongenic,nongenic -1060 upstream,470 downstream {F56A3.1},{F56A3.5} 318 CB6878_redo I 5221052 1 C A 255 1.00 63 62 0 33 33 @AaAaAAAAaAAaaAaaaAAaaaAAAaAaAaaaa point 0 nongenic -5830 upstream {C32E12.5.1} 325 CB6878_redo I 5301101 1 C A 255 1.00 63 62 0 20 20 @aaaaaaAaAaAAAaAAaAaa point 0 SNP,three_prime_UTR none,none {haw6781,uCE1-872},{C01G8.9a} 326 CB6878_redo I 5304213 1 C T 255 1.00 63 62 1 36 37 @tTtttTtTtTtttTtTtTTttTt,tTTTttTtttTtT point 0 missense GAT->AAT[Asp->Asn] {C01G8.9a,C01G8.9b} 327 CB6878_redo I 5357123 1 T C 44 1.00 63 30 3 6 9 @CcCCCC,,, point 0 nongenic,nongenic,nongenic -1399 upstream,187 downstream,96 downstream {F55A12.3},{F55A12.4c},{F55A12.4a} 328 CB6878_redo I 5357124 1 C T 31 1.00 63 44 3 4 7 @TTTT,,, point 0 nongenic,nongenic,nongenic -1398 upstream,188 downstream,97 downstream {F55A12.3},{F55A12.4c},{F55A12.4a} 329 CB6878_redo I 5444693 1 C T 255 1.00 63 62 0 36 36 @tttTTtTtTtttTtTttTTTTTTTtTTTtTTTTTTt point 0 nongenic,nongenic -1663 upstream,813 into {F27C1.11},{F27C1.13} 330 CB6878_redo I 5448372 1 A T 255 1.00 63 62 0 26 26 @ttttTTttTTTtTttTTTTtTttTtt point 0 SNP none {haw6835} 331 CB6878_redo I 5451259 1 G A 255 2.00 63 62 1 28 29 @aAaAaAaa,aAaaaAAaAAaaAaaAaaAA point 0 nongenic -4400 upstream {F27C1.13} 332 CB6878_redo I 5504578 1 C T 255 3.38 63 62 0 26 26 @ttTtttttttttttTtTTTtTTtTTt point 0 nongenic,nongenic,nongenic 508 into,858 downstream,869 into {C09D4.1b.1,C09D4.1b.2},{F59A3.3},{C09D4.1a} 333 CB6878_redo I 5590737 1 A C 19 1.00 63 62 2 2 4 @..cc point 0 nongenic,nongenic,nongenic -1153 upstream,126 into,6517 into {M01E11.7b.1},{M01E11.7d},{M01E11.7a,M01E11.7c} 336 CB6878_redo I 5623542 1 C T 255 1.00 63 62 0 27 27 @tttTttTtttttttTtttTtTTttttT point 0 missense GAT->AAT[Asp->Asn] {F46F11.10} 337 CB6878_redo I 5727285 1 T A 255 1.00 63 62 0 17 17 @AAaAaAaAaaaaAaaaa point 0 nongenic 899 into {C04F1.1} 338 CB6878_redo I 5910988 1 C T 255 1.00 63 62 0 32 32 @tTTTtTTtttTttTttTTTTttTTtttTTttT point 0 missense CCA->TCA[Pro->Ser] {C34G6.1} 339 CB6878_redo I 5915797 1 C T 255 1.00 63 62 0 32 32 @ttTTtTttTTtttTTTTTTTtTttttTtTTtT point 0 silent CAC->CAT[His->His] {C34G6.1} 340 CB6878_redo I 5989488 1 C T 255 1.00 63 62 0 30 30 @tTTtTtTtttttTttTTtTTTttttTtttT point 0 nongenic,nongenic,nongenic,nongenic -1584 upstream,-3616 upstream,1096 into,857 into {C06A5.11},{C06A5.6},{C06A5.3a},{C06A5.3b} 341 CB6878_redo I 6015007 1 C T 255 1.00 63 62 0 15 15 @TtTTTTTtTttTTTT point 0 missense CCA->TCA[Pro->Ser] {C06A5.1} 342 CB6878_redo I 6139031 1 A T 231 3.50 63 62 0 10 10 @tttttTTtTt point 0 nongenic,nongenic 186 downstream,73 downstream {F56F4.6},{F56F4.4} 343 CB6878_redo I 6163210 1 T A 255 1.00 63 62 0 31 31 @AAAAaAAaAaaAAaAaAaAAaAAAAAAAaAa point 0 SNP none {haw7231} 344 CB6878_redo I 6163280 1 T C 141 1.00 63 34 0 5 5 @ccccC point 0 nongenic -1612 upstream {T09B4.7} 348 CB6878_redo I 6186100 1 T G 255 1.00 63 62 0 33 33 @GGgGggGGGGGGGGGGgGgGGgGGGGGggGgGG point 0 nongenic,nongenic,nongenic -2060 upstream,637 into,791 downstream {T05E7.3},{T09B4.1},{T09B4.2} 349 CB6878_redo I 6228418 1 T C 25 1.00 63 30 1 3 4 @CCC. point 0 missense TCC->CCC[Ser->Pro] {T08B2.3} 350 CB6878_redo I 6263282 1 G C 88 1.00 63 62 0 4 4 @Cccc point 0 SNP none {snp_C48E7[3]} 351 CB6878_redo I 6332022 1 G A 255 1.00 63 62 0 35 35 @AaaaAAaAaaaaAaAAaAAAAaAAAaAaAAAaaaA point 0 nongenic -10210 upstream {K04F10.4a.1,K04F10.4a.2,K04F10.4b,K04F10.4c,K04F10.4d,K04F10.4e,K04F10.4f} 352 CB6878_redo I 6336784 1 C T 255 1.00 63 62 0 27 27 @ttttTtTtTtTTtTTTTTTtttttTTt point 0 nongenic -5448 upstream {K04F10.4a.1,K04F10.4a.2,K04F10.4b,K04F10.4c,K04F10.4d,K04F10.4e,K04F10.4f} 353 CB6878_redo I 6377791 1 C T 255 1.00 63 62 0 29 29 @tTTtttTTttTttTTTTtTtttttttTtt point 0 missense,SNP CCG->CTG[Pro->Leu],none {ZC308.1a,ZC308.1c,ZC308.1d},{haw7269,pas22101} 354 CB6878_redo I 6447302 1 T G 255 1.00 63 62 0 20 20 @GggGGgGGGGGGgGGGGGgG point 0 nongenic,nongenic -31 upstream,-835 upstream {T23H2.1},{T23H2.3} 358 CB6878_redo I 6648852 1 C T 255 3.88 63 62 0 17 17 @TTTTTTTTTTttTTttt point 0 nongenic,nongenic -2368 upstream,-5435 upstream {ZC581.3},{ZC581.6} 359 CB6878_redo I 6672653 1 C T 255 1.00 63 62 0 23 23 @ttttTTTtttTtTtTTtTTtTTT point 0 nongenic,nongenic -2248 upstream,-9715 upstream {ZC581.9},{C17F3.3} 360 CB6878_redo I 6729097 1 C T 255 1.00 63 62 0 38 38 @ttTTTtTttTTttTTtTtTtTTttTTTttTtTTtTTtt point 0 nongenic,nongenic,nongenic,nongenic 281 into,283 into,765 downstream,960 downstream {W02D3.5.2,W02D3.5.3},{W02D3.5.1},{W02D3.3},{W02D3.6} 362 CB6878_redo I 6820252 1 T C 255 1.00 63 62 0 24 24 @ccCcCCCccCCCcCcCCCcCcCcC point 0 SNP none {haw7362} 363 CB6878_redo I 6850821 1 C T 255 1.00 63 62 0 36 36 @TtTttTttTtTTTtTtttTtttTTttTTTtTTTTtT point 0 silent TCC->TCT[Ser->Ser] {H27M09.2} 364 CB6878_redo I 6881867 1 C T 255 1.00 63 62 0 44 44 @TtTtTtttTtttttttttTtTTTTttttTTttttttttTtTttt point 0 missense GAG->AAG[Glu->Lys] {T21G5.5c} 369 CB6878_redo I 6947551 1 C T 255 1.00 63 62 0 38 38 @ttTttttttTtTTTttTTtTTttTTTTTttttttTTTT point 0 missense AGA->AAA[Arg->Lys] {T10B11.7a,T10B11.7b} 370 CB6878_redo I 6949307 1 A G 254 2.06 63 62 0 20 20 @ggGGgggggGggGggggggg point 0 nongenic,nongenic,nongenic,nongenic -1826 upstream,-3949 upstream,1151 into,814 into {T10B11.1},{T10B11.6},{T10B11.7a},{T10B11.7b} 371 CB6878_redo I 6949331 1 T A 227 2.06 63 62 0 16 16 @AaaAaaaaaaaaaaaa point 0 nongenic,nongenic,nongenic,nongenic -1802 upstream,-3973 upstream,1127 into,790 into {T10B11.1},{T10B11.6},{T10B11.7a},{T10B11.7b} 372 CB6878_redo I 6969725 1 C A 255 1.00 63 62 0 15 15 @AaaaAAAaaAAAAAA point 0 missense TTG->TTT[Leu->Phe] {C30F12.2.1,C30F12.2.2} 373 CB6878_redo I 7140681 1 G T 255 1.00 63 62 0 16 16 @ttTtTtTttttttTtT point 0 nongenic,nongenic -708 upstream,405 into {K10D3.4},{H37N21.1} 374 CB6878_redo I 7140819 1 T C 255 1.00 63 62 0 20 20 @CCCCcCCCCCCCCCCCCCCc point 0 SNP none {haw7427} 375 CB6878_redo I 7140831 1 A T 255 1.00 63 62 0 22 22 @TtTTTTTTTTTTTTTTtTTTTt point 0 SNP none {haw7428} 376 CB6878_redo I 7238112 1 C T 255 1.00 63 62 0 17 17 @tttTTTtTtttTttTtt point 0 nongenic,nongenic,nongenic -3612 upstream,676 into,879 downstream {R06C7.2},{R06C7.1},{R06C7.3.1,R06C7.3.2,R06C7.3.3} 377 CB6878_redo I 7275060 1 A T 255 1.00 63 62 0 31 31 @tTTtTTtTTTtTTTtTtttttTttTTtTttT point 0 nongenic,nongenic -2888 upstream,781 into {F21C3.1},{F21C3.2} 378 CB6878_redo I 7301404 1 C G 255 1.00 63 62 0 24 24 @GGGGGggggGgggggggggGgGgg point 0 missense GGC->GCC[Gly->Ala] {F13G3.5a,F13G3.5b.1,F13G3.5b.2} 379 CB6878_redo I 7309935 1 C T 255 1.00 63 62 1 27 28 @tTtTTt,TtTtTTttTtttttTTtTttT point 0 nongenic,nongenic 1295 into,1335 into {F13G3.8.2},{F13G3.8.1} 383 CB6878_redo I 7423376 1 G T 255 1.00 63 62 0 30 30 @TTtTtTttTTtTTTTtTTtTtTtTTttTTT point 0 nongenic,nongenic -10036 upstream,596 into {ZK524.2c},{ZK524.2a,ZK524.2d,ZK524.2e} 384 CB6878_redo I 7428554 1 T C 255 1.00 63 62 0 21 21 @cCCcCcCCcCcCCCccCCCcc point 0 SNP none {haw7535} 385 CB6878_redo I 7456618 1 C T 255 1.00 63 62 0 35 35 @TttTTTTtTTTtttttttTtTttTTTTttttttTt point 0 missense CTT->TTT[Leu->Phe] {ZK524.1} 387 CB6878_redo I 7547117 1 A T 255 1.00 63 62 0 17 17 @tttTTTttTttTttttt point 0 SNP none {haw7629} 388 CB6878_redo I 7547127 1 A T 255 1.00 63 62 0 23 23 @tTTTttTttTttttttTTtTTTt point 0 SNP none {haw7630} 389 CB6878_redo I 7547365 1 C A 150 1.00 63 62 0 11 11 @AAAaAAAaAaA point 0 SNP none {haw7631} 390 CB6878_redo I 7556268 1 C T 255 1.00 63 62 0 42 42 @TTtTTTTtTtTTTTtTtTttTttTTtTttTtTTtTTtTttTT point 0 silent GTC->GTT[Val->Val] {T25G3.2.1,T25G3.2.2} 404 CB6878_redo I 7719299 1 T G 3 7.44 0 2 5 9 14 @GGGG.GG..G.GG, point 0 nongenic -12247 upstream {F27D4.2b.1,F27D4.2b.2} 415 CB6878_redo I 7786825 1 C T 255 1.00 63 62 0 31 31 @TTtTttTTtTtTTtTTTttttTTtTTTtttt point 0 missense TGC->TAC[Cys->Tyr] {D2005.6} 417 CB6878_redo I 7869008 1 T A 143 1.00 63 62 0 5 5 @AaaAa point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -1095 upstream,-749 upstream,2533 into,2614 into,2657 into,2659 into,2668 into,2832 into,2883 into {R11A5.6},{R11A5.4c.1},{R11A5.4d.5},{R11A5.4a.1,R11A5.4a.2,R11A5.4b.2},{R11A5.4c.2},{R11A5.4c.3,R11A5.4d.1,R11A5.4d.3,R11A5.4d.4,R11A5.4d.6},{R11A5.4d.2},{R11A5.4c.4},{R11A5.4b.1} 418 CB6878_redo I 7869009 1 C T 152 1.00 63 62 0 7 7 @TttTtTT point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -1096 upstream,-748 upstream,2534 into,2615 into,2658 into,2660 into,2669 into,2833 into,2884 into {R11A5.6},{R11A5.4c.1},{R11A5.4d.5},{R11A5.4a.1,R11A5.4a.2,R11A5.4b.2},{R11A5.4c.2},{R11A5.4c.3,R11A5.4d.1,R11A5.4d.3,R11A5.4d.4,R11A5.4d.6},{R11A5.4d.2},{R11A5.4c.4},{R11A5.4b.1} 419 CB6878_redo I 7879475 1 C T 120 1.00 63 62 0 4 4 @TTtT point 0 SNP none {haw7930} 420 CB6878_redo I 7879517 1 G A 128 1.00 63 62 0 7 7 @aaaaAAa point 0 nongenic,nongenic -3962 upstream,-4828 upstream {R11A5.7.1},{F55D12.1} 421 CB6878_redo I 7879522 1 A T 192 1.00 63 62 0 8 8 @ttttTTtT point 0 nongenic,nongenic -3967 upstream,-4823 upstream {R11A5.7.1},{F55D12.1} 424 CB6878_redo I 8037998 1 C T 255 1.00 63 62 0 23 23 @TTtTtTttTTTTTttttTttTtT point 0 missense GAC->AAC[Asp->Asn] {K04G2.5} 425 CB6878_redo I 8042444 1 G A 255 1.00 63 62 0 27 27 @aaAaaaAaaaaAAaAAAaaaAAAaaaA point 0 missense CGT->CAT[Arg->His] {K04G2.6.1,K04G2.6.2} 426 CB6878_redo I 8182630 1 C T 255 1.00 63 62 0 19 19 @ttTtTTTTTtTttTTtttT point 0 nongenic,nongenic -13421 upstream,297 into {F08A10.1a,F08A10.1d},{F08A10.2} 430 CB6878_redo I 8256705 1 C T 255 1.00 63 62 0 29 29 @TTttTtttTttTtTTTTttTTTtTTTTTT point 0 nongenic,nongenic,nongenic -5326 upstream,353 into,466 downstream {ZK265.7},{ZK265.5},{ZK265.6} 431 CB6878_redo I 8281031 1 T C 255 1.00 63 62 1 37 38 @CccCcC.CcCcccCCcCCCCCcCcCccCCCCCcCCCcc point 0 nongenic,nongenic,nongenic,nongenic -948 upstream,5156 into,5373 into,5392 into {T01G9.3},{T01G9.2b.2},{T01G9.2a},{T01G9.2b.1} 432 CB6878_redo I 8285159 1 C T 255 1.00 63 62 0 28 28 @TtTTTtTtTtttTtTtTtTtTTTTTttT point 0 nongenic,nongenic,nongenic 2958 into,2960 into,706 downstream {T01G9.2a,T01G9.2b.2},{T01G9.2b.1},{T01G9.3} 433 CB6878_redo I 8347873 1 C A 9 1.00 63 62 2 3 5 @..aaa point 0 nongenic,nongenic -1857 upstream,-5529 upstream {C34B7.3},{F16D3.1} 434 CB6878_redo I 8381339 1 C T 255 1.00 63 62 0 25 25 @TTttttTTtTtttTTtTTTTTTTTt point 0 nongenic,nongenic,nongenic -3633 upstream,3042 into,3834 into {F16D3.7},{T19A6.1a,T19A6.1c},{T19A6.1b} 435 CB6878_redo I 8392253 1 G C 9 1.81 63 62 6 6 12 @,,.,,,ccCCCc point 0 nongenic,nongenic,nongenic -2232 upstream,-2467 upstream,479 into {T19A6.1a},{T19A6.2a,T19A6.2b.3,T19A6.2b.4,T19A6.2c},{T19A6.1b,T19A6.1c} 436 CB6878_redo I 8393169 1 C T 255 1.00 63 62 0 24 24 @TTttTTTtTTtTTTTTTTTtTTTT point 0 nongenic,nongenic -1551 upstream,-437 upstream {T19A6.2a,T19A6.2b.3,T19A6.2b.4,T19A6.2c},{T19A6.1b,T19A6.1c} 443 CB6878_redo I 8583761 1 T C 255 1.00 63 62 0 34 34 @CcCCcccCcCcCCccCcccCcCCccCCCCCcCcc point 0 nongenic,nongenic -3610 upstream,787 downstream {T01H8.1c},{R05D11.1} 452 CB6878_redo I 8874622 1 G T 255 1.00 63 62 0 26 26 @ttTTttttttttTTTtttTTTtttTt point 0 missense TGT->TTT[Cys->Phe] {F55H12.1} 453 CB6878_redo I 8999041 1 A T 255 1.00 63 62 0 15 15 @tttTTtTttTttttt point 0 nongenic,nongenic 443 into,455 downstream {F32H2.6},{F32H2.9} 459 CB6878_redo I 9027425 1 T C 255 1.56 63 62 0 30 30 @cCCcCcCcCcCCCCCccCCCcCcCCCCcCC point 0 nongenic 1578 into {C31H5.1} 460 CB6878_redo I 9039720 1 A G 255 1.00 63 62 0 21 21 @ggggGGGggGGGgGGGgGggG point 0 SNP none {haw8746} 162383 CB6878_redo I 9205275 58 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered,uncovered non-exonic, 392 to 450 bp into,non-exonic, 4997 to 5055 bp into,non-exonic, 4999 to 5057 bp into {F25H5.1c.2},{F25H5.1a,F25H5.1c.3,F25H5.1f},{F25H5.1c.1} 461 CB6878_redo I 9235193 1 C T 255 1.00 63 62 0 22 22 @TtttttTtttTtTTTttTttTt point 0 SNP none {haw8914} 462 CB6878_redo I 9235318 1 G A 255 1.00 63 62 0 20 20 @AaAAaAAAAAAAAAaaaAAA point 0 SNP none {haw8915} 463 CB6878_redo I 9235427 1 G A 226 1.00 63 62 0 11 11 @aAaAaaAaaaa point 0 nongenic,nongenic,nongenic -1877 upstream,1258 into,758 into {VF36H2L.1},{F36H2.1b},{F36H2.1a,F36H2.1c} 464 CB6878_redo I 9246865 1 C G 255 1.00 63 62 0 30 30 @GGGggGGGgGgggggggGggGgGGggGgGG point 0 missense,SNP CGT->CCT[Arg->Pro],none {F36H2.2},{haw8926} 465 CB6878_redo I 9246866 1 G C 255 1.00 63 62 0 30 30 @CCccCCCcCcccccccCccCcCCccCcCCC point 0 missense,SNP CGT->GGT[Arg->Gly],none {F36H2.2},{haw8927} 467 CB6878_redo I 9299982 1 C T 255 1.00 63 62 0 26 26 @TTTTtttttTtTtttTtttTtTTTtT point 0 nongenic -5983 upstream {F26H9.2} 468 CB6878_redo I 9346153 1 A C 117 1.00 63 62 0 5 5 @Ccccc point 0 nongenic,nongenic -3665 upstream,1439 into {C12C8.3a,C12C8.3b},{M04C9.2} 470 CB6878_redo I 9357394 1 A G 255 1.00 63 62 0 21 21 @ggggggGGGgGGgGGgggGGG point 0 nongenic,nongenic -1671 upstream,-323 upstream {M04C9.5a},{M04C9.4} 471 CB6878_redo I 9381543 1 C T 255 1.00 63 62 0 32 32 @TTtttTttTttTtTtttttTTttTtTtTttTT point 0 nongenic,nongenic 8083 into,8766 into {F16A11.3a,F16A11.3b,F16A11.3c},{F16A11.3d} 475 CB6878_redo I 9457731 1 G A 255 1.00 63 62 0 27 27 @aaAAAAaaaaaAAAAaaaAAaaAAAAA point 0 SNP none {haw9060} 476 CB6878_redo I 9468865 1 C T 12 1.00 63 12 1 3 4 @ttT. point 0 nongenic,nongenic -815 upstream,20 downstream {F46A9.4},{F46A9.3a,F46A9.3b} 477 CB6878_redo I 9468866 1 T C 12 1.00 63 12 1 3 4 @ccC. point 0 nongenic,nongenic -814 upstream,21 downstream {F46A9.4},{F46A9.3a,F46A9.3b} 478 CB6878_redo I 9573999 1 T C 255 1.00 63 62 0 24 24 @cccCCCccCcccCccccccCCCCc point 0 nongenic,nongenic,nongenic,nongenic,nongenic -5777 upstream,162 into,180 into,370 into,794 downstream {C36F7.4d},{C36F7.4a.1},{C36F7.4a.2},{C36F7.4b,C36F7.4c},{C36F7.5} 482 CB6878_redo I 9699160 1 T C 255 1.00 63 62 0 20 20 @CCcCccccCCCCcCcCccCC point 0 missense,SNP AAT->AGT[Asn->Ser],none {C04F12.8},{haw9282} 483 CB6878_redo I 9730073 1 C T 136 2.62 63 62 0 5 5 @TttTT point 0 nongenic,nongenic -1974 upstream,-7739 upstream {C16C2.3a},{K02A11.1a,K02A11.1b.1} 484 CB6878_redo I 9737906 1 C A 255 1.00 63 62 0 19 19 @AaAAAaaAAaaAaAAAaAa point 0 SNP none {haw9323} 485 CB6878_redo I 9816117 1 G T 237 1.00 63 62 0 13 13 @tTtTTTTTTTTTT point 0 nongenic,nongenic -229 upstream,-759 upstream {F35C12.3c},{F35C12.3a} 489 CB6878_redo I 9940580 1 A T 255 1.00 63 62 0 27 27 @TtTTTtTttTttTTtttTttttTTTTT point 0 SNP none {haw9585} 490 CB6878_redo I 10030935 1 A T 49 1.00 63 34 1 4 5 @TTtT, point 0 nongenic,nongenic 775 into,887 downstream {F10G8.7},{F10G8.3.1} 492 CB6878_redo I 10059422 1 C A 255 1.00 63 62 0 34 34 @AAAAaaaaaAaaAaaaAAAAAAaaAAaAAaaAaa point 0 nongenic,nongenic 2555 into,2576 into {F10G8.8b},{F10G8.8a} 493 CB6878_redo I 10072642 1 C A 255 1.00 63 62 0 30 30 @aAAaaaAaAAAAAAAAaaAaAAaAAAaaaa point 0 missense GTA->TTA[Val->Leu] {B0379.7.1,B0379.7.2} 494 CB6878_redo I 10109254 1 T A 255 1.00 63 62 0 40 40 @aaAaaaAAAaaAaAaAaAAAaaaAaAAAaaAAAAaAAAaa point 0 SNP none {haw9645} 5867 CB6878_redo I 10113279 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @..,,T indel 0 inframe none {Y106G6D.3} 506 CB6878_redo I 10188886 1 T C 255 1.44 63 62 0 29 29 @CcCCCCcccCCccCccCCCcCCccccccc point 0 silent AAA->AAG[Lys->Lys] {C25A1.10a,C25A1.10b} 518 CB6878_redo I 10243053 1 G A 12 1.00 63 62 2 3 5 @,,AAa point 0 nongenic,nongenic -11847 upstream,-5224 upstream {Y106G6E.6.1},{ZC247.3} 520 CB6878_redo I 10269036 1 A C 5 6.94 0 26 5 10 15 @CcCcCcCCcc,,,., point 0 missense,SNP TTC->GTC[Phe->Val],none {ZC247.1},{uCE1-1065} 527 CB6878_redo I 10315724 1 T A 14 1.31 63 20 1 3 4 @.aAA point 0 SNP none {haw9710} 529 CB6878_redo I 10414165 1 C T 245 1.00 63 62 0 16 16 @TTTAtTTttTtTtTTT point 0 nongenic 328 downstream {F25D7.3a,F25D7.3b} 5869 CB6878_redo I 10436459 0 X X -1000 -999.99 -1000 -1000 5 0 5 @,.,,,ggg indel 0 nongenic,nongenic,nongenic,nongenic -205 downstream,-592 upstream,-646 upstream,444 downstream {Y106G6H.3},{Y106G6H.2a.1},{Y106G6H.2a.2},{Y106G6H.4} 545 CB6878_redo I 10462798 1 G A 37 1.25 63 2 1 5 6 @AAaA.a point 0 nongenic -7174 upstream {Y106G6H.9} 546 CB6878_redo I 10462800 1 A G 83 1.19 63 30 0 8 8 @GGgGggGG point 0 nongenic -7176 upstream {Y106G6H.9} 547 CB6878_redo I 10504352 1 C T 255 1.00 63 62 0 15 15 @tTTtttTTtTtTttT point 0 nongenic 1084 into {F37D6.6} 548 CB6878_redo I 10512521 1 T A 255 1.00 63 62 0 31 31 @AAaaAaAaaAAAAAaaaAAaAAAAaAAaaaA point 0 missense AGT->AGA[Ser->Arg] {F59C6.8} 549 CB6878_redo I 10595968 1 T C 255 1.00 63 62 0 35 35 @cccCccCCcCccCccccCcccCCCcCCcCcCCCcc point 0 nongenic,nongenic -2730 upstream,1506 into {T22A3.5},{T22A3.6} 550 CB6878_redo I 10736162 1 C T 250 1.00 63 62 0 14 14 @TtTTttTttttttt point 0 missense GCT->GTT[Ala->Val] {B0205.7} 551 CB6878_redo I 10741683 1 C T 255 1.00 63 62 0 40 40 @TtTTtTtTtTtttttTtttTttTtttttTtttttTtTttt point 0 silent CCG->CCA[Pro->Pro] {B0205.4} 553 CB6878_redo I 10879806 1 C T 255 1.00 63 62 0 18 18 @TtttttTtTtttTTTttt point 0 three_prime_UTR none {T27C10.6} 554 CB6878_redo I 10916370 1 C T 255 1.00 63 62 0 17 17 @TTTTTTttTtTtTTTTT point 0 nongenic,nongenic -686 upstream,763 downstream {F49D11.3a},{F49D11.4} 569 CB6878_redo I 10978887 1 A G 255 1.00 63 62 0 25 25 @GGgggggGgGgGGGGggGggggGgG point 0 silent,SNP TCA->TCG[Ser->Ser],none {Y52B11A.3a,Y52B11A.3b},{haw9930} 570 CB6878_redo I 11001775 1 C A 255 1.00 63 62 0 18 18 @AaAaaAAAAaAAaAAAaA point 0 nongenic,nongenic -13703 upstream,2502 into {Y52B11A.5},{Y52B11A.4} 571 CB6878_redo I 11036091 1 G A 255 1.00 63 62 0 20 20 @AaAaAaaAaAAaaAaaaAaa point 0 nongenic,nongenic -2957 upstream,2007 into {Y52B11A.10},{Y52B11A.9} 572 CB6878_redo I 11220200 1 C A 255 1.00 63 62 0 15 15 @AaaAAaaaaAAAAAa point 0 SNP none {haw10216} 588 CB6878_redo I 11438309 1 C T 3 4.38 0 22 3 20 23 @tttTt.TT..TTTTTTTTTTTtT point 0 nongenic,nongenic -968 upstream,911 downstream {C27C7.1},{C27C7.8} 5873 CB6878_redo I 11505539 0 X X -1000 -999.99 -1000 -1000 2 0 2 @..AA indel 0 nongenic,nongenic,nongenic -1582 downstream,-4518 upstream,-5893 upstream {F32B4.8},{F32B4.1},{K08C9.6} 597 CB6878_redo I 11522478 1 T G 37 1.00 63 12 1 3 4 @GGg, point 0 nongenic,nongenic,nongenic,nongenic -1826 upstream,-253 upstream,4075 into,656 into {F32B4.5},{F32B4.4a},{F32B4.4b.1},{F32B4.4b.2} 598 CB6878_redo I 11527255 1 G A 255 1.00 63 62 0 21 21 @AaaaAaAaAaaAaaaAAaaAA point 0 premature_stop CAG->TAG[Gln->stop] {F15D3.1a,F15D3.1b} 599 CB6878_redo I 11603465 1 A G 175 1.00 63 62 0 8 8 @gggggGgg point 0 SNP none {haw10691} 600 CB6878_redo I 11606261 1 A T 255 1.00 63 62 0 24 24 @tTttTTTtttTttTtTTTtTtttT point 0 SNP none {haw10701} 605 CB6878_redo I 11628456 1 A G 255 1.12 63 62 0 29 29 @ggGGgGgggGggGGgGggggGgggGgggG point 0 nongenic -1174 upstream {W04G5.3} 614 CB6878_redo I 11713508 1 C T 183 2.19 63 62 5 13 18 @TttttttTTtTT,,t,,, point 0 SNP none {haw10896} 615 CB6878_redo I 11729741 1 A C 3 6.69 0 2 1 5 6 @,cccgc point 0 nongenic -3468 upstream {F35E2.9} 616 CB6878_redo I 11837215 1 G T 255 1.25 63 62 0 13 13 @ttTtTtTTTTTTT point 0 nongenic,nongenic -4058 upstream,766 into {Y47H9C.1},{Y47H9C.2} 618 CB6878_redo I 11859033 1 C A 255 1.69 63 62 1 17 18 @aAAAaaaAAAAa.aaaaa point 0 nongenic,nongenic,nongenic,nongenic,nongenic -18759 upstream,-5840 upstream,7091 into,7473 into,7478 into {Y47H9C.5a},{Y47H9C.4d},{Y47H9C.4c},{Y47H9C.4b},{Y47H9C.4a} 620 CB6878_redo I 11868441 1 G A 7 9.75 63 0 1 3 4 @,AAA point 0 nongenic,nongenic -345 upstream,-9351 upstream {Y47H9C.4a,Y47H9C.4b,Y47H9C.4c},{Y47H9C.5a} 621 CB6878_redo I 11868444 1 A C 32 8.00 63 6 1 5 6 @,CCCcc point 0 nongenic,nongenic -348 upstream,-9348 upstream {Y47H9C.4a,Y47H9C.4b,Y47H9C.4c},{Y47H9C.5a} 625 CB6878_redo I 11883806 1 G C 255 7.06 63 62 0 25 25 @CccCCCcccccccccCcCCCccccC point 0 nongenic,nongenic,nongenic -1215 upstream,-15710 upstream,3453 into {Y47H9C.5b},{Y47H9C.4a,Y47H9C.4b,Y47H9C.4c},{Y47H9C.5a} 626 CB6878_redo I 11886321 1 A G 3 1.00 63 2 2 8 10 @GGGGG,,GGG point 0 nongenic,nongenic,nongenic -18225 upstream,817 into,938 into {Y47H9C.4a,Y47H9C.4b,Y47H9C.4c},{Y47H9C.5b},{Y47H9C.5a} 627 CB6878_redo I 11905377 1 T C 255 1.00 63 62 0 21 21 @CCcccCCcCcCCCCCCcCccc point 0 SNP none {haw11247} 628 CB6878_redo I 11975955 1 A T 12 5.50 0 12 0 4 4 @tttt point 0 nongenic,nongenic -3474 upstream,-4167 upstream {Y53C10A.4},{Y53C10A.15} 629 CB6878_redo I 11975961 1 C A 69 4.00 63 42 0 6 6 @aaaaaa point 0 nongenic,nongenic -3468 upstream,-4173 upstream {Y53C10A.4},{Y53C10A.15} 630 CB6878_redo I 11988102 1 C T 255 1.00 63 62 0 27 27 @ttttttTtTtttTTttttTtTTtTTtt point 0 SNP none {haw11443} 631 CB6878_redo I 12093640 1 T A 119 2.06 50 62 4 23 27 @,,,AAAAAAAAAAAAAAA,AAAAAAAA point 0 nongenic,nongenic -3680 upstream,831 into {Y47H10A.3},{Y47H10A.4} 635 CB6878_redo I 12479794 1 G T 133 3.00 63 62 0 6 6 @TtTTtT point 0 nongenic,nongenic -1216 upstream,-4375 upstream {T27F6.2},{T27F6.4} 636 CB6878_redo I 12479795 1 G T 130 3.00 63 62 0 6 6 @TtTTtT point 0 nongenic,nongenic -1217 upstream,-4374 upstream {T27F6.2},{T27F6.4} 640 CB6878_redo I 12555741 1 T A 255 1.00 63 62 0 19 19 @aaAaaAAAaAaaAAAAAAa point 0 nongenic -1411 upstream {W02D9.9} 641 CB6878_redo I 12564714 1 T A 255 1.00 63 62 0 12 12 @AaAaaAAaaaaA point 0 nongenic,nongenic 204 into,514 downstream {C49G9.1},{C49G9.2} 642 CB6878_redo I 12676428 1 G T 51 1.00 63 46 2 3 5 @,,cTT point 0 nongenic -2771 upstream {T26E3.2} 645 CB6878_redo I 12862392 1 T A 255 1.00 63 62 0 30 30 @aaAAaaaaaaaAAaaAaAAAAaaaAaaaAg point 0 SNP none {haw13170} 646 CB6878_redo I 12871730 1 T C 255 1.00 63 62 0 23 23 @cCCcccCCccccCcCCCcCCCCc point 0 nongenic,nongenic -2184 upstream,-6853 upstream {Y18D10A.23},{Y18D10A.13} 647 CB6878_redo I 12871733 1 T C 255 1.00 63 62 0 23 23 @CCcccCCccccCcCCCcCCCCcc point 0 SNP none {uCE1-1387} 651 CB6878_redo I 13015757 1 T C 255 1.00 63 62 0 15 15 @cCCcCCcCCcCcccc point 0 nongenic,nongenic,nongenic,nongenic -17855 upstream,3550 into,4308 into,7524 into {W05B5.4},{ZK256.1b},{ZK256.1c},{ZK256.1a} 652 CB6878_redo I 13015767 1 T C 255 1.00 63 62 0 13 13 @CcCCcCccccCcc point 0 nongenic,nongenic,nongenic,nongenic -17845 upstream,3560 into,4318 into,7514 into {W05B5.4},{ZK256.1b},{ZK256.1c},{ZK256.1a} 653 CB6878_redo I 13015797 1 T C 255 3.31 63 62 0 15 15 @CccCCCCCccCccCc point 0 nongenic,nongenic,nongenic,nongenic -17815 upstream,3590 into,4348 into,7484 into {W05B5.4},{ZK256.1b},{ZK256.1c},{ZK256.1a} 654 CB6878_redo I 13101703 1 A T 7 1.00 63 0 2 2 4 @tt.. point 0 missense AAA->AAT[Lys->Asn] {Y26D4A.21} 656 CB6878_redo I 13118108 1 T C 255 8.69 63 62 0 24 24 @CccCCCCcCcccCCCCccCcCcCC point 0 nongenic -2971 upstream {C17H1.9} 657 CB6878_redo I 13168446 1 C G 255 1.00 63 62 0 40 40 @gGGggGgggggGggGgGggGGggggGGGgggGGggggggg point 0 missense,SNP CAC->GAC[His->Asp],none {F22G12.5},{haw13520} 658 CB6878_redo I 13185290 1 T C 15 1.00 63 6 1 3 4 @cCC, point 0 ncRNA none {F17B5.1b} 659 CB6878_redo I 13185291 1 C T 17 1.00 63 6 1 3 4 @tTT, point 0 ncRNA none {F17B5.1b} 667 CB6878_redo I 13419807 1 T A 198 1.00 63 62 0 9 9 @AaaaaAaaA point 0 SNP none {haw14087} 668 CB6878_redo I 13482732 1 G T 219 1.00 63 62 0 9 9 @ttttTttTT point 0 nongenic,nongenic,nongenic -6815 upstream,-8558 upstream,4661 into {Y48G10A.1.1},{Y48G10A.3},{Y48G10A.2} 671 CB6878_redo I 13499009 1 C T 255 1.00 63 62 2 23 25 @t,Tt,TTtTTtTttTTTtTTTTTTt point 0 nongenic,nongenic -4023 upstream,-5722 upstream {Y87G2A.14},{Y87G2A.17} 672 CB6878_redo I 13526997 1 A C 9 1.00 63 62 1 5 6 @cc,ccc point 0 nongenic 817 downstream {Y87G2A.1} 673 CB6878_redo I 13539024 1 A T 185 2.00 63 62 0 10 10 @TtTTTTtTtT point 0 nongenic 2063 into {Y87G2A.3} 676 CB6878_redo I 13560104 1 G A 255 1.00 63 62 0 22 22 @aaAAAAaaaAAAaaaAaaAAAA point 0 nongenic,nongenic -411 upstream,-754 upstream {Y87G2A.16},{Y87G2A.5} 678 CB6878_redo I 13584208 1 A C 145 2.00 63 62 0 15 15 @CCcCccccccccccc point 0 nongenic 1077 into {Y87G2A.9} 685 CB6878_redo I 13617740 1 C T 7 1.00 63 6 4 4 8 @tTtT..,. point 0 silent TTG->TTA[Leu->Leu] {Y6B3A.1c} 686 CB6878_redo I 13617741 1 A C 6 1.00 63 6 4 4 8 @cCcC..,. point 0 missense TTG->TGG[Leu->Trp] {Y6B3A.1c} 687 CB6878_redo I 13642685 1 G T 184 1.00 63 62 0 8 8 @tTTTTTtt point 0 SNP none {haw14305} 688 CB6878_redo I 13663386 1 G A 255 1.00 63 62 0 28 28 @AAAAaaAAAAAaAAaAAAAAaAAAAAaA point 0 nongenic -85 upstream {W04A4.5} 692 CB6878_redo I 13832461 1 G C 210 2.00 63 62 0 14 14 @cCcccCCcCccCCC point 0 nongenic -327 upstream {W09G3.1a,W09G3.1b} 693 CB6878_redo I 13860804 1 C T 129 1.00 63 62 0 6 6 @tttttt point 0 SNP none {haw14642} 694 CB6878_redo I 13860835 1 G C 227 1.00 63 62 0 9 9 @ccccCCCCc point 0 SNP none {haw14643} 695 CB6878_redo I 13985036 1 A G 255 1.00 63 62 0 20 20 @GGGGggGGGGggGGgGggGg point 0 missense,SNP AAA->GAA[Lys->Glu],none {Y71A12B.17},{haw14760} 696 CB6878_redo I 14002230 1 T G 152 5.38 63 62 20 60 80 @GcgGgGGg,gGggGG,G,G,AG,G,GG.G,,GG,G,,G,GG,gGGGGGGGg,G,GGGgGGGGGGg,g,,,GGGGGGGGGG point 0 nongenic -2215 upstream {Y71A12B.12a.1} 697 CB6878_redo I 14002390 1 T G 126 6.75 63 62 26 34 60 @,GGG.....GG,.GGGG..G,G.....g.....AG....g.GGGgGGgggggGGGGGGgG point 0 SNP none {haw14764} 700 CB6878_redo I 14028609 1 C G 50 1.00 63 2 1 3 4 @,ggg point 0 nongenic 374 downstream {ZC334.12} 701 CB6878_redo I 14049137 1 T C 255 1.00 63 62 0 29 29 @CCCCCCCCcCCCCcccCCCCCccCCCcCc point 0 SNP none {uCE1-1488} 702 CB6878_redo I 14063027 1 C T 255 1.00 63 62 0 40 40 @TTTttTTTTTttTttTTTtTtTtTTTTtttttTtTTTTTt point 0 nongenic,nongenic,nongenic,nongenic -12795 upstream,-902 upstream,152 into,292 into {F47G4.3},{F47G4.5},{F47G4.4.2},{F47G4.4.1} 705 CB6878_redo I 14097922 1 T C 255 1.00 63 62 0 21 21 @cCcCCCCCcCcCcccccccCc point 0 nongenic,nongenic,nongenic -1588 upstream,-3341 upstream,381 into {Y63D3A.2},{Y63D3A.5.1},{Y63D3A.4} 162388 CB6878_redo I 14137826 210 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 4156 to 4366 bp into {K03D10.1} 710 CB6878_redo I 14150766 1 A T 69 3.00 63 54 0 4 4 @TTTt point 0 nongenic -8574 upstream {K03D10.1} 713 CB6878_redo I 14188643 1 G A 255 1.00 63 62 0 31 31 @aAAAaaaAaAAaaAaAaaaAAAAaaaAAaaA point 0 nongenic,nongenic,nongenic -3018 upstream,240 into,3014 into {ZK849.1},{ZK849.2a,ZK849.2b},{ZK849.2c} 715 CB6878_redo I 14244891 1 G C 42 1.00 63 32 0 5 5 @Ccccc point 0 nongenic,nongenic -1323 upstream,-471 upstream {C49A1.6},{C49A1.10} 723 CB6878_redo I 14319060 1 A T 211 1.00 63 62 0 9 9 @TttTTTtTt point 0 nongenic -3163 upstream {F49B2.5} 731 CB6878_redo I 14349943 1 T A 41 1.00 63 46 1 4 5 @.AAAA point 0 nongenic,nongenic,nongenic -6150 upstream,-8567 upstream,2443 into {Y105E8A.1},{Y105E8A.3},{Y105E8A.2} 732 CB6878_redo I 14349944 1 A C 47 1.00 63 40 1 5 6 @.CCCCC point 0 nongenic,nongenic,nongenic -6151 upstream,-8566 upstream,2444 into {Y105E8A.1},{Y105E8A.3},{Y105E8A.2} 733 CB6878_redo I 14362092 1 G T 223 1.00 63 62 0 9 9 @TtttTTttt point 0 SNP none {haw15184} 734 CB6878_redo I 14363822 1 A T 79 5.50 50 62 0 11 11 @tttttttTTTT point 0 nongenic,nongenic -5509 upstream,3757 into {Y105E8A.2},{Y105E8A.3} 735 CB6878_redo I 14363832 1 T C 79 4.25 50 62 0 10 10 @ccccCCCCCC point 0 nongenic,nongenic -5519 upstream,3747 into {Y105E8A.2},{Y105E8A.3} 162390 CB6878_redo I 14391806 120 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1486 to 1606 bp into {Y105E8A.7a,Y105E8A.7b} 742 CB6878_redo I 14431046 1 C A 221 1.00 63 62 0 11 11 @AaAaaaAAaaA point 0 SNP none {haw15294} 744 CB6878_redo I 14480479 1 G A 255 1.00 63 62 0 25 25 @aaAAAAAAAAaAaaAAaaaAaaaAa point 0 SNP none {haw15337} 745 CB6878_redo I 14518026 1 C G 255 1.06 63 62 0 13 13 @GgGgggGGgGGGG point 0 SNP none {haw15420} 751 CB6878_redo I 14574065 1 A G 11 2.50 63 38 0 34 34 @ggGgggNggggggGGggggggggGgggggggggg point 0 nongenic,nongenic,nongenic -8233 upstream,4561 into,6747 into {Y105E8A.23a,Y105E8A.23b},{Y105E8A.24b},{Y105E8A.24a} 752 CB6878_redo I 14579727 1 C T 255 1.00 63 62 0 27 27 @TttTTtTTtTTtTttTTTTTTTTTttt point 0 nongenic,nongenic -13895 upstream,1240 into {Y105E8A.23a,Y105E8A.23b},{Y105E8A.24a,Y105E8A.24b} 753 CB6878_redo I 14586339 1 A C 255 1.00 63 62 0 20 20 @CcCcccCcCcccCcCccccc point 0 SNP none {haw15496} 754 CB6878_redo I 14610358 1 C T 159 2.31 63 62 0 9 9 @ttttttttt point 0 nongenic -6231 upstream {Y105E8A.25} 759 CB6878_redo I 14610406 1 A G 140 1.00 63 62 0 5 5 @gGGGG point 0 nongenic -6279 upstream {Y105E8A.25} 760 CB6878_redo I 14610408 1 T C 138 1.00 63 62 0 5 5 @cCCCC point 0 nongenic -6281 upstream {Y105E8A.25} 761 CB6878_redo I 14610447 1 A G 185 1.12 63 62 0 14 14 @GGGGGGGGGGGGGG point 0 nongenic -6320 upstream {Y105E8A.25} 767 CB6878_redo I 14632390 1 G C 15 1.00 63 0 0 6 6 @CCCCCC point 0 nongenic -1148 upstream {Y105E8B.1f} 772 CB6878_redo I 14668309 1 G C 4 1.00 63 0 1 4 5 @CCC.c point 0 nongenic,nongenic 3872 into,3874 into {Y105E8B.8b.1},{Y105E8B.8a,Y105E8B.8b.2,Y105E8B.8c} 776 CB6878_redo I 14675915 1 A T 255 1.00 63 62 0 29 29 @ttttTTtTTTttTTTTtTtTTtTttTTTt point 0 SNP none {haw15602} 785 CB6878_redo I 14758817 1 T C 255 1.00 63 62 0 34 34 @cCcCCcCccCCcCcCCcCCccCcCccccCcCccc point 0 nongenic,nongenic,nongenic -1089 upstream,397 downstream,42 downstream {F39B2.6.1},{F39B2.10.2},{F39B2.10.1} 790 CB6878_redo I 14877163 1 A T 217 1.00 63 62 0 15 15 @TTTTTTTTTtTTTTT point 0 nongenic,nongenic,nongenic,nongenic -32063 upstream,1337 into,1413 into,781 into {ZK270.1},{ZK270.2a.2},{ZK270.2a.1},{ZK270.2a.3,ZK270.2b,ZK270.2d,ZK270.2e} 791 CB6878_redo I 14918627 1 A C 255 1.00 63 62 0 12 12 @CCcccccCCcCC point 0 SNP none {haw15977} 793 CB6878_redo I 15040328 1 T C 255 1.00 63 62 0 22 22 @CCccCCccCccCCCCccccCCC point 0 silent,SNP ATT->ATC[Ile->Ile],none {F31C3.2a,F31C3.2b},{haw16048} 822 CB6878_redo I 15071724 1 A G 37 3.19 24 2 0 29 29 @GGGgGGGGGgGGGGGGGGGGGggGGGgGg point 0 nongenic -12733 upstream {F31C3.6a} 825 CB6878_redo II 80148 1 C T 141 1.00 63 62 9 21 30 @t,,T.tt.TTTTtTTtt,ttt.,TT.tT.t point 0 nongenic,nongenic -2635 upstream,-4285 upstream {C23H3.9a},{C50D2.6} 826 CB6878_redo II 130092 1 G A 96 1.00 63 62 7 11 18 @,...aaA,A.a,AaAAaA point 0 nongenic,nongenic,nongenic -1385 upstream,890 downstream,958 downstream {K10B4.5},{K10B4.6a},{K10B4.6b} 832 CB6878_redo II 171351 1 T G 27 1.38 63 50 2 9 11 @GGGGGGGGG.. point 0 nongenic,nongenic,nongenic 34 downstream,722 downstream,744 downstream {T01D1.7},{T01D1.2a.1},{T01D1.2a.4} 162392 CB6878_redo II 503961 648 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1405 to 2053 bp into {T27A1.1} 835 CB6878_redo II 523340 1 C G 19 1.00 63 18 1 3 4 @GGg, point 0 nongenic,nongenic,nongenic -3249 upstream,740 into,748 into {T27A1.4},{T27A1.5a.2,T27A1.5b.2},{T27A1.5a.1,T27A1.5b.1} 836 CB6878_redo II 523341 1 G C 19 1.00 63 18 1 3 4 @CCc, point 0 nongenic,nongenic,nongenic -3248 upstream,741 into,749 into {T27A1.4},{T27A1.5a.2,T27A1.5b.2},{T27A1.5a.1,T27A1.5b.1} 837 CB6878_redo II 553514 1 G C 37 1.00 63 62 12 16 28 @,cc,cC.,CC.C.,cc.Cc.c.CCc.,C point 0 nongenic,nongenic -327 upstream,422 into {C09E8.2b},{C09E8.2a} 840 CB6878_redo II 556126 1 G C 4 1.00 63 0 1 4 5 @C,ccc point 0 nongenic -356 upstream {C09E8.1a,C09E8.1b} 5885 CB6878_redo II 595628 0 X X -1000 -999.99 -1000 -1000 6 -2 4 @.,,,,.AAA indel 0 nongenic,nongenic,nongenic,nongenic,nongenic -300 downstream,-419 downstream,-423 downstream,-926 upstream,-9849 upstream {W04H10.3a,W04H10.3b.3},{W04H10.3b.2},{W04H10.3b.1},{W08F4.11},{W04H10.2} 846 CB6878_redo II 632436 1 C G 3 1.00 63 0 1 4 5 @.gggg point 0 nongenic,nongenic -1853 upstream,450 downstream {T04B8.1},{T04B8.2} 847 CB6878_redo II 632438 1 C G 15 1.00 63 2 0 6 6 @gggggg point 0 nongenic,nongenic -1851 upstream,452 downstream {T04B8.1},{T04B8.2} 848 CB6878_redo II 661370 1 C T 163 1.44 63 62 8 24 32 @.TT.tTttttt.tTtTttt.Ttt,,tt,ttt. point 0 silent CAG->CAA[Gln->Gln] {K07E8.9} 849 CB6878_redo II 670657 1 G A 47 1.00 63 62 4 6 10 @.A,AAA.,aa point 0 nongenic,nongenic -3780 upstream,475 into {Y39F10C.1},{K07E8.11} 878 CB6878_redo II 809621 1 G T 255 1.00 63 62 0 17 17 @ttTTtTttTTtttTttt point 0 SNP none {haw16920,pas14035} 879 CB6878_redo II 851173 1 T A 3 6.00 0 2 3 7 10 @GGAAAA.,,c point 0 nongenic,nongenic -512 upstream,488 downstream {F28A10.5},{Y46B2A.2} 881 CB6878_redo II 857060 1 A C 13 7.69 26 34 2 3 5 @GCC.. point 0 nongenic -843 upstream {Y46B2A.2} 883 CB6878_redo II 935804 1 A G 255 1.00 63 62 0 32 32 @GGGggGGGgGGgggggGggGGggGGgGGgggg point 0 silent AAA->AAG[Lys->Lys] {R07C3.4} 884 CB6878_redo II 959061 1 A T 255 1.00 63 62 0 24 24 @tttttTTtTTttttTTTtTTttTt point 0 nongenic,nongenic -1472 upstream,95 into {C32B5.7},{C32B5.16} 886 CB6878_redo II 1028180 1 T A 72 1.00 63 62 3 6 9 @a.aaaaa.. point 0 nongenic,nongenic,nongenic -3394 upstream,1205 into,1289 into {M01D1.3},{M01D1.2a},{M01D1.2b} 895 CB6878_redo II 1221570 1 T G 146 1.00 63 62 1 8 9 @.GggGGgGG point 0 nongenic,nongenic -2786 upstream,9217 into {F53A10.2c},{F53A10.2a} 896 CB6878_redo II 1221572 1 G A 168 1.00 63 62 1 8 9 @.AaaAAaAA point 0 SNP none {haw17694} 898 CB6878_redo II 1333323 1 C G 200 1.75 63 62 0 10 10 @ggggggGGgg point 0 nongenic,nongenic -3747 upstream,6323 into {F56D12.4b,F56D12.4c.2},{F56D12.4a} 901 CB6878_redo II 1392498 1 T C 255 1.00 63 62 0 21 21 @cCCCcCcccccCcCCcccCCC point 0 nongenic,nongenic 924 downstream,995 downstream {F54D12.3},{F54D12.11} 5888 CB6878_redo II 1577786 0 X X -1000 -999.99 -1000 -1000 2 1 3 @.,gGG indel 0 inframe none {T07H3.3a} 931 CB6878_redo II 1637578 1 C G 179 1.00 63 62 0 11 11 @gAggGgGGgGG point 0 nongenic 884 into {ZC204.4a,ZC204.4b} 932 CB6878_redo II 1637579 1 G C 199 1.00 63 62 0 10 10 @CccCcCCcCC point 0 nongenic 885 into {ZC204.4a,ZC204.4b} 933 CB6878_redo II 1644279 1 G C 3 7.50 63 0 1 3 4 @C,cc point 0 silent GGC->GGG[Gly->Gly] {ZC204.6} 939 CB6878_redo II 1850708 1 T C 255 1.00 63 62 0 22 22 @CcccCccccccCccccccCcCc point 0 nongenic,nongenic -307 upstream,-537 upstream {C52E2.7},{C52E2.3} 5892 CB6878_redo II 1862306 0 X X -1000 -999.99 -1000 -1000 4 -3 1 @,.,c.gggc indel 4 nongenic,nongenic -330 upstream,898 downstream {C16C4.6},{C16C4.7} 946 CB6878_redo II 2001658 1 A C 127 1.94 63 62 0 14 14 @CCCCCCCCCCCCCC point 0 nongenic,nongenic -1719 upstream,-836 upstream {F59H6.5},{C40D2.4} 950 CB6878_redo II 2049646 1 G A 96 1.00 63 62 5 10 15 @aAaa,A,aaaA,A.. point 0 nongenic,nongenic -2988 upstream,377 downstream {B0047.4},{F07E5.4} 951 CB6878_redo II 2119161 1 A G 13 2.50 0 12 0 5 5 @GGGGG point 0 nongenic,nongenic -2265 upstream,1011 into {R52.7},{R52.8} 954 CB6878_redo II 2190806 1 T C 255 1.00 63 62 0 24 24 @ccccccCCccCCCcCCcCCcCCCc point 0 nongenic -1347 upstream {C33C12.9} 956 CB6878_redo II 2225250 1 G T 13 2.00 63 12 0 5 5 @ttttt point 0 nongenic,nongenic,nongenic,nongenic -1708 upstream,460 into,462 into,569 downstream {F54A3.4},{F54A3.5.2},{F54A3.5.1},{F54A3.6} 957 CB6878_redo II 2225256 1 A T 21 1.00 63 8 0 5 5 @ttttt point 0 nongenic,nongenic,nongenic,nongenic -1714 upstream,454 into,456 into,563 downstream {F54A3.4},{F54A3.5.2},{F54A3.5.1},{F54A3.6} 958 CB6878_redo II 2225261 1 A C 21 1.00 63 0 0 5 5 @ccccc point 0 nongenic,nongenic,nongenic,nongenic -1719 upstream,449 into,451 into,558 downstream {F54A3.4},{F54A3.5.2},{F54A3.5.1},{F54A3.6} 960 CB6878_redo II 2225268 1 G T 21 1.00 63 4 0 6 6 @tttttt point 0 nongenic,nongenic,nongenic,nongenic -1726 upstream,442 into,444 into,551 downstream {F54A3.4},{F54A3.5.2},{F54A3.5.1},{F54A3.6} 961 CB6878_redo II 2225271 1 A C 4 1.00 63 4 0 7 7 @ccttctc point 0 nongenic,nongenic,nongenic,nongenic -1729 upstream,439 into,441 into,548 downstream {F54A3.4},{F54A3.5.2},{F54A3.5.1},{F54A3.6} 962 CB6878_redo II 2269809 1 C G 3 2.50 63 28 1 3 4 @GG,g point 0 nongenic,nongenic -4372 upstream,546 into {K09F6.4},{K09F6.2} 967 CB6878_redo II 2472169 1 C T 169 1.00 63 62 0 9 9 @ttttttttt point 0 SNP none {haw20431} 968 CB6878_redo II 2564358 1 C G 57 1.00 63 62 2 3 5 @GGg,, point 0 nongenic,nongenic -679 upstream,-917 upstream {K02F6.9},{F09D1.1} 969 CB6878_redo II 2570475 1 A T 10 1.00 63 62 8 19 27 @TTTTTTTTTT,T.T.TT,,.T,TT.TT point 0 nongenic,nongenic -6796 upstream,5200 into {K02F6.9},{F09D1.1} 977 CB6878_redo II 2642042 1 G A 34 1.00 63 14 2 3 5 @AAa,, point 0 nongenic,nongenic 143 downstream,42 into {F22E5.8},{F22E5.7} 978 CB6878_redo II 2642044 1 C G 14 1.00 63 34 2 3 5 @GGg,, point 0 nongenic,nongenic 145 downstream,44 into {F22E5.8},{F22E5.7} 988 CB6878_redo II 2716393 1 A C 17 1.00 63 62 2 2 4 @C,,c point 0 nongenic,nongenic -5373 upstream,1043 into {T05A8.2},{T05A8.3} 989 CB6878_redo II 2799760 1 A T 210 1.00 63 62 0 8 8 @tTtTtTtT point 0 SNP none {haw21113} 990 CB6878_redo II 2801924 1 A G 3 1.00 63 0 4 12 16 @GGGGGGG,GGGGG... point 0 nongenic,nongenic -1375 upstream,-6241 upstream {K12H6.1},{K12H6.12} 991 CB6878_redo II 2801926 1 A G 3 1.00 63 2 5 9 14 @GGGG,CGGGG,... point 0 nongenic,nongenic -1377 upstream,-6239 upstream {K12H6.1},{K12H6.12} 994 CB6878_redo II 2813973 1 A T 52 1.00 63 62 4 8 12 @T.t.,.TTtTTT point 0 nongenic,nongenic -3001 upstream,1017 into {K12H6.11},{K12H6.2} 995 CB6878_redo II 2843349 1 G C 89 1.00 63 6 0 4 4 @cccc point 0 nongenic -161 upstream {Y110A2AL.7} 997 CB6878_redo II 2878113 1 A C 3 1.00 63 36 1 4 5 @CC,CC point 0 nongenic 839 downstream {Y110A2AL.12a,Y110A2AL.12b} 1001 CB6878_redo II 2896820 1 C T 79 1.00 63 62 15 23 38 @ttt,tT,T.tTTTTTtt.TT,Ttt,TtT.,,,.t,,.. point 0 missense GAT->AAT[Asp->Asn] {Y110A2AM.3} 1003 CB6878_redo II 2900766 1 A T 100 1.00 63 62 0 4 4 @TTTT point 0 three_prime_UTR none {Y110A2AM.4} 162394 CB6878_redo II 2900781 78 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 225 to 303 bp into {Y110A2AM.4} 1006 CB6878_redo II 2900872 1 C A 170 1.00 63 62 0 6 6 @aaAaAA point 0 three_prime_UTR none {Y110A2AM.4} 1007 CB6878_redo II 2900873 1 G T 172 1.00 63 62 0 7 7 @ttTtTTt point 0 three_prime_UTR none {Y110A2AM.4} 1020 CB6878_redo II 3159620 1 A T 134 6.75 63 62 2 11 13 @ttttttttt,tt, point 0 nongenic -539 upstream {Y27F2A.7} 1037 CB6878_redo II 3278964 1 T A 255 1.00 63 62 0 27 27 @AaAaaaAAaAAAaAaAaAAaAAAaaAa point 0 SNP none {haw22209} 1039 CB6878_redo II 3465252 1 C G 5 1.88 0 26 3 10 13 @g.GGGggG.GGG. point 0 nongenic -576 upstream {C16C8.10} 1046 CB6878_redo II 3531441 1 C G 23 4.50 63 12 1 3 4 @GGg, point 0 nongenic -2930 upstream {W09G10.3} 1052 CB6878_redo II 3532125 1 C G 226 8.19 63 62 0 12 12 @ggggggggggGG point 0 nongenic,nongenic,nongenic -3614 upstream,470 downstream,758 downstream {W09G10.3},{W09G10.4a},{W09G10.4b} 1053 CB6878_redo II 3532191 1 G C 141 1.00 63 62 0 7 7 @CCCCCCC point 0 nongenic,nongenic,nongenic -3680 upstream,404 downstream,692 downstream {W09G10.3},{W09G10.4a},{W09G10.4b} 1054 CB6878_redo II 3532196 1 T C 108 1.00 63 62 0 4 4 @CCCC point 0 nongenic,nongenic,nongenic -3685 upstream,399 downstream,687 downstream {W09G10.3},{W09G10.4a},{W09G10.4b} 1055 CB6878_redo II 3650567 1 C A 255 1.00 63 62 0 20 20 @AaAaAaaAAAAAaAaaaaaa point 0 nongenic -682 upstream {F19B10.11} 1056 CB6878_redo II 3796556 1 C T 103 2.25 63 62 42 213 255 @....tttTtttTTTtt.,.TT,.tT..G,...TtTTT,t.T,TgT,GT,GGGGTTT..tTGGTG,GTGGGGTGGGGG.TTGTTGGTTTGTTGGTGTGTG point 0 silent ACC->ACT[Thr->Thr] {Y8A9A.2} 5900 CB6878_redo II 3796666 0 X X -1000 -999.99 -1000 -1000 13 -10 3 @,,,,,,...,g.ggggtgGGGG,GG.g indel 0 inframe none {Y8A9A.2} 1058 CB6878_redo II 3797014 1 T C 13 5.00 0 2 0 5 5 @ccccc point 0 missense CTG->CCG[Leu->Pro] {Y8A9A.2} 1059 CB6878_redo II 3797059 1 C T 63 6.25 31 62 9 64 73 @TttTtttT.Ttt..ttttttt,ttTttt.tttttttttttttttt.tt,tttTtttttt.tttttt.ttTTtt point 0 missense CCG->CTG[Pro->Leu] {Y8A9A.2} 1061 CB6878_redo II 3797266 1 T A 133 3.75 63 62 20 39 59 @AaAaaaaAA,aA,AaAaA.,,.a,,,aaA.aa,,A.AaaA,aAaa.,,A.aaaAA.a.a point 0 missense CTG->CAG[Leu->Gln] {Y8A9A.2} 1062 CB6878_redo II 3797353 1 A T 254 3.44 63 62 18 49 67 @.TtTTTT.TTTT.TT.TT.TT.ttT.tTTT.TtttttTTTTtTTTT.tT..TTt.t.tT....TT.T point 0 missense CAT->CTT[His->Leu] {Y8A9A.2} 1088 CB6878_redo II 4142478 1 C G 209 1.00 63 62 0 8 8 @GgGgGGGg point 0 nongenic -331 upstream {F56D3.1.2} 1089 CB6878_redo II 4142481 1 G A 210 1.00 63 62 0 9 9 @AaAaAAAaa point 0 nongenic -328 upstream {F56D3.1.2} 1090 CB6878_redo II 4142501 1 A T 255 1.00 63 62 0 20 20 @tTTTTTTttTTTTttttttt point 0 nongenic -308 upstream {F56D3.1.2} 1092 CB6878_redo II 4273308 1 A C 19 1.00 63 4 0 5 5 @CCCCC point 0 nongenic,nongenic -14532 upstream,-2898 upstream {C16A11.8},{C01F1.4} 1093 CB6878_redo II 4273309 1 G A 18 1.00 63 4 0 4 4 @AAAA point 0 nongenic,nongenic -14533 upstream,-2897 upstream {C16A11.8},{C01F1.4} 1105 CB6878_redo II 4398912 1 T C 39 1.00 63 38 1 3 4 @cCC, point 0 nongenic,nongenic -6942 upstream,5936 into {ZK430.5},{ZK430.8} 1106 CB6878_redo II 4398913 1 A T 39 1.00 63 38 1 3 4 @tTT, point 0 nongenic,nongenic -6941 upstream,5935 into {ZK430.5},{ZK430.8} 1107 CB6878_redo II 4399212 1 G C 32 1.00 63 10 2 3 5 @,,cCC point 0 nongenic,nongenic -6642 upstream,5636 into {ZK430.5},{ZK430.8} 1108 CB6878_redo II 4468036 1 G T 255 1.00 63 62 0 17 17 @TTTtTTttTTtTTtTTT point 0 SNP none {haw24704} 1109 CB6878_redo II 4468046 1 G T 255 1.00 63 62 0 15 15 @TTttTTtTTtTTTTT point 0 nongenic,nongenic -114 upstream,159 downstream {W06B4.2},{W06B4.3} 1110 CB6878_redo II 4478953 1 G C 25 1.00 63 62 3 4 7 @,,,ccCc point 0 nongenic 335 into {T05C1.1} 1111 CB6878_redo II 4484308 1 T C 98 1.00 63 62 1 5 6 @cccCC. point 0 nongenic -595 upstream {T05C1.2} 1113 CB6878_redo II 4499374 1 G C 255 1.00 63 62 0 18 18 @CCCCCCCcCcccCccccC point 0 SNP none {haw24761} 1114 CB6878_redo II 4510485 1 T G 92 1.00 63 46 1 4 5 @.GgGg point 0 nongenic,nongenic -1713 upstream,-5349 upstream {B0304.3},{T05C1.4a,T05C1.4b} 1115 CB6878_redo II 4510486 1 G C 92 1.00 63 62 1 4 5 @.CcCc point 0 nongenic,nongenic -1712 upstream,-5350 upstream {B0304.3},{T05C1.4a,T05C1.4b} 1117 CB6878_redo II 4642238 1 T A 5 8.25 0 4 1 4 5 @.AaAa point 0 nongenic,nongenic -3908 upstream,-6843 upstream {F35D11.11a,F35D11.11b,F35D11.11c},{Y74E4A.1b} 1118 CB6878_redo II 4642240 1 C T 22 4.75 22 4 0 5 5 @TtTtT point 0 nongenic,nongenic -3910 upstream,-6841 upstream {F35D11.11a,F35D11.11b,F35D11.11c},{Y74E4A.1b} 1129 CB6878_redo II 4763297 1 A T 65 1.00 63 38 1 3 4 @Ttt. point 0 missense AAT->ATT[Asn->Ile] {F26G1.2a} 1130 CB6878_redo II 4782901 1 A G 54 1.00 63 62 1 4 5 @gGGG. point 0 nongenic -1564 upstream {F26G1.6} 1139 CB6878_redo II 4921078 1 A G 25 1.00 63 4 0 4 4 @ggGg point 0 nongenic,nongenic,nongenic -4494 upstream,-9886 upstream,4157 into {R05F9.13},{ZK546.7},{R05F9.12} 1140 CB6878_redo II 4929759 1 C A 255 1.31 63 62 0 30 30 @aaAAAaAaAaaAAaaAaAaaaaaAAaAAAa point 0 SNP none {haw25053} 1141 CB6878_redo II 4964576 1 C A 255 1.00 63 62 0 19 19 @aaaaAAAaaAAaaaaaaaA point 0 SNP none {haw25061} 1143 CB6878_redo II 5028913 1 C T 35 1.00 63 48 1 4 5 @TtTG. point 0 nongenic 1055 into {F59A6.1} 1150 CB6878_redo II 5136066 1 C G 4 1.00 63 34 2 2 4 @..gg point 0 nongenic -789 upstream {F58A6.2} 1154 CB6878_redo II 5185654 1 G C 255 1.00 63 62 0 31 31 @CCcCccCCCcCcCCCCCCCCCCCCcCCcCCc point 0 missense,SNP CCT->CGT[Pro->Arg],none {C27D6.4c},{haw25156,uCE2-1607} 1165 CB6878_redo II 5231227 1 T G 94 1.00 63 60 0 4 4 @gggG point 0 nongenic,nongenic -174 upstream,747 downstream {EGAP2.1},{EGAP2.2} 1166 CB6878_redo II 5231250 1 A C 178 1.00 63 62 0 7 7 @cccCCCC point 0 nongenic,nongenic -151 upstream,770 downstream {EGAP2.1},{EGAP2.2} 1167 CB6878_redo II 5258815 1 G T 7 1.00 63 62 2 2 4 @,,tT point 0 nongenic,nongenic -2169 upstream,-3014 upstream {C54A12.3},{C54A12.2} 1194 CB6878_redo II 5322089 1 T A 255 1.00 63 62 0 32 32 @AAaaaAAAaaAAaaaaAAaaAAAAAaaaaAAA point 0 nongenic -890 upstream {F08B1.1a.3,F08B1.1c.1} 1195 CB6878_redo II 5563746 1 T G 22 1.38 63 62 2 4 6 @.,gGGG point 0 nongenic,nongenic -2308 upstream,249 downstream {C17C3.2},{C17C3.3} 1197 CB6878_redo II 5571578 1 G C 255 1.00 63 62 0 26 26 @CCcCcccccCCCccccCccCCCCccC point 0 missense,three_prime_UTR GAC->CAC[Asp->His],none {C17C3.15},{C17C3.1c} 1200 CB6878_redo II 5635095 1 C G 255 1.00 63 62 0 27 27 @ggggGgGgggGgGgGGggGGGGggggg point 0 missense,SNP GAA->CAA[Glu->Gln],none {F59E12.8},{haw25459} 1201 CB6878_redo II 5647429 1 C T 255 1.00 63 62 0 34 34 @TtTtTTTttttttTTTTTTTtttTTtTTTTtTtT point 0 silent,SNP AAG->AAA[Lys->Lys],none {F59E12.10},{haw25466} 1209 CB6878_redo II 5723522 1 G T 125 1.00 63 62 0 5 5 @TTTTT point 0 nongenic,nongenic 1178 into,1791 into {C18A3.6b.1},{C18A3.6a,C18A3.6b.2} 1212 CB6878_redo II 5768687 1 C A 255 1.00 63 62 0 32 32 @aaAaaAAAAaAaaaAaaaaaaAAaaaaaaAaA point 0 nongenic,nongenic,nongenic,nongenic -10297 upstream,-171 upstream,-225 upstream,3102 into {F10C1.3},{F10C1.2a.1},{F10C1.2a.2},{F10C1.2b} 1213 CB6878_redo II 5775939 1 C A 94 1.00 63 62 2 7 9 @,,aaaaAAa point 0 nongenic -6976 upstream {K05F1.6a} 1218 CB6878_redo II 5861709 1 G A 88 1.00 63 62 2 5 7 @..AaAaA point 0 nongenic,nongenic -2452 upstream,-3317 upstream {F55C12.7.1,F55C12.7.2,F55C12.7.3},{F55C12.4} 5925 CB6878_redo II 5931438 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @,,..cCC indel 0 nongenic -2020 upstream {F28B12.2a} 1222 CB6878_redo II 5960458 1 C T 255 1.00 63 62 0 16 16 @TtTtTtTtTtttttTT point 0 SNP none {haw25654} 1228 CB6878_redo II 6057202 1 T C 26 1.00 63 54 2 2 4 @cc,, point 0 nongenic,nongenic,nongenic -854 upstream,152 downstream,512 downstream {R12C12.7},{R12C12.8a},{R12C12.8b} 1235 CB6878_redo II 6070027 1 T A 3 2.75 0 24 5 12 17 @.aa.a,aaaAAa.aaA. point 0 nongenic -2929 upstream {H12I13.2} 1237 CB6878_redo II 6099643 1 A C 121 1.00 63 0 0 4 4 @cCCC point 0 nongenic,nongenic -375 upstream,21 downstream {C29H12.3a},{F21H12.1} 1240 CB6878_redo II 6187713 1 T C 104 9.25 63 62 8 16 24 @..c.c.....CCCCCCcCCCCCCC point 0 nongenic -400 upstream {F40H3.6} 1244 CB6878_redo II 6205127 1 G A 31 0.00 63 2 0 4 4 @AAAA point 0 nongenic 3015 into {C30B5.5} 1246 CB6878_redo II 6296972 1 C T 24 1.56 63 62 34 35 69 @,TtT,tttTtT,tt.t,..tttt.,t.T.,,tt.TTT.,tTtTTt.,.tttTT..,t.,,...,..,,. point 0 nongenic,nongenic -2868 upstream,222 downstream {C29F5.4a,C29F5.4b},{C29F5.5} 1248 CB6878_redo II 6451387 1 A T 255 1.00 63 62 0 15 15 @tTtTtTttttTTTtT point 0 SNP none {haw25895} 1252 CB6878_redo II 6522778 1 A C 36 1.00 63 62 4 6 10 @,...ccCCcC point 0 nongenic,nongenic -2098 upstream,-2982 upstream {C56E6.2},{C56E6.3a} 1253 CB6878_redo II 6527423 1 G A 255 1.00 63 62 0 20 20 @AAAaAAAaAAaAaAaAaAaa point 0 silent,SNP ATC->ATT[Ile->Ile],none {C56E6.4},{haw25905} 1254 CB6878_redo II 6527424 1 A T 255 1.00 63 62 0 18 18 @TtTTTtTTtTtTtTtTtt point 0 missense,SNP ATC->AAC[Ile->Asn],none {C56E6.4},{haw25906} 1259 CB6878_redo II 6616256 1 T G 26 1.00 63 62 2 3 5 @,.GGg point 0 nongenic,nongenic -1910 upstream,-6950 upstream {F54H5.4b},{C56C10.12} 1260 CB6878_redo II 6616257 1 G C 72 1.00 63 26 1 4 5 @.CCcc point 0 nongenic,nongenic -1909 upstream,-6951 upstream {F54H5.4b},{C56C10.12} 1261 CB6878_redo II 6620907 1 C G 102 1.00 63 62 0 5 5 @ggggG point 0 nongenic,nongenic,nongenic,nongenic -11601 upstream,-1229 upstream,1193 into,964 into {C56C10.12},{F54H5.3},{F54H5.4b},{F54H5.4a} 1262 CB6878_redo II 6620908 1 G C 73 1.00 63 62 1 4 5 @cccC. point 0 nongenic,nongenic,nongenic,nongenic -11602 upstream,-1228 upstream,1192 into,963 into {C56C10.12},{F54H5.3},{F54H5.4b},{F54H5.4a} 1263 CB6878_redo II 6630609 1 T C 11 1.00 63 62 22 24 46 @,c....,.CCc.,.,,CcCC.ccc.CCccC,C.,..cC,,CcCCc, point 0 nongenic,nongenic -492 upstream,-536 upstream {T19D12.4a},{T19D12.4b} 1268 CB6878_redo II 6657780 1 T A 83 1.00 63 10 0 5 5 @AAaAA point 0 nongenic,nongenic,nongenic -2440 upstream,-3448 upstream,1034 into {T19D12.3},{T19D12.9},{T19D12.10} 1273 CB6878_redo II 6669138 1 G C 77 1.00 63 62 4 11 15 @ccccccccccc,,,, point 0 silent TCG->TCC[Ser->Ser] {T19D12.1} 5933 CB6878_redo II 6713193 0 X X -1000 -999.99 -1000 -1000 4 0 4 @.,,.gGgg indel 0 nongenic,nongenic -1043 upstream,-314 upstream {T14B4.6},{T14B4.7b.1} 1278 CB6878_redo II 6721749 1 A C 124 2.00 63 18 0 5 5 @cCccc point 0 ncRNA none {T14B4.t1} 1282 CB6878_redo II 6724148 1 A C 71 1.00 63 34 1 4 5 @CCcc. point 0 nongenic -2584 upstream {T14B4.8} 1283 CB6878_redo II 6724150 1 C A 34 1.00 63 62 2 3 5 @Aaa.. point 0 nongenic -2586 upstream {T14B4.8} 1284 CB6878_redo II 6725103 1 C G 78 1.00 63 32 1 5 6 @ggGgG, point 0 nongenic -3539 upstream {T14B4.8} 1285 CB6878_redo II 6727391 1 T G 104 1.00 63 62 1 6 7 @GGGGGg, point 0 SNP none {haw25948} 162401 CB6878_redo II 6730771 71 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2882 to 2953 bp into {T14B4.9} 1289 CB6878_redo II 6734010 1 C T 94 1.00 63 62 0 4 4 @TTTT point 0 nongenic,nongenic -286 upstream,-836 upstream {T14B4.9},{T14B4.3} 1290 CB6878_redo II 6734012 1 T C 91 1.00 63 62 0 5 5 @CCCcc point 0 nongenic,nongenic -288 upstream,-834 upstream {T14B4.9},{T14B4.3} 1291 CB6878_redo II 6734013 1 C T 83 1.00 63 62 0 4 4 @TTtt point 0 nongenic,nongenic -289 upstream,-833 upstream {T14B4.9},{T14B4.3} 1292 CB6878_redo II 6736304 1 C G 255 1.00 63 62 0 23 23 @GggGgggGggGgggGGgGgGGgG point 0 missense,SNP TCC->TGC[Ser->Cys],none {T14B4.2},{haw25953} 1293 CB6878_redo II 6736306 1 T C 255 1.00 63 62 0 25 25 @CccCcccCccCcccCCcCcCCcCCc point 0 missense,SNP TTC->CTC[Phe->Leu],none {T14B4.2},{haw25954} 1294 CB6878_redo II 6736474 1 A C 133 1.00 63 62 0 7 7 @CCCCCcc point 0 missense AAC->CAC[Asn->His] {T14B4.2} 1295 CB6878_redo II 6736476 1 C A 167 1.00 63 62 0 8 8 @AAAAAaaA point 0 missense AAC->AAA[Asn->Lys] {T14B4.2} 1296 CB6878_redo II 6736477 1 A C 168 1.00 63 62 0 8 8 @CCCCCccC point 0 missense AAG->CAG[Lys->Gln] {T14B4.2} 1302 CB6878_redo II 6745251 1 A C 189 1.00 63 62 0 7 7 @CcCcCCc point 0 nongenic,nongenic -580 upstream,168 downstream {F41G3.17},{F41G3.16} 1303 CB6878_redo II 6750712 1 T G 82 1.00 63 6 0 4 4 @GggG point 0 silent GGA->GGC[Gly->Gly] {F41G3.20} 1304 CB6878_redo II 6755908 1 A T 255 1.00 63 62 0 22 22 @TtTTTtTtTTTtttTtTTttTT point 0 SNP none {haw25965} 5940 CB6878_redo II 6759798 0 X X -1000 -999.99 -1000 -1000 6 -4 2 @,.....tttt indel 0 nongenic,nongenic,nongenic -567 downstream,825 downstream,936 downstream {F41G3.2},{F41G3.12},{F41G3.3} 1305 CB6878_redo II 6759908 1 C T 108 1.00 63 62 0 4 4 @tttt point 0 missense CCC->TCC[Pro->Ser] {F41G3.2} 1308 CB6878_redo II 6762603 1 C T 255 1.00 63 62 0 13 13 @TTttTtTTttttt point 0 SNP none {haw25977} 1313 CB6878_redo II 6766065 1 C T 255 1.00 63 62 0 20 20 @ttTTtTtTtttTTTTtTTTt point 0 SNP none {haw25988} 1314 CB6878_redo II 6766211 1 C T 255 1.00 63 62 0 28 28 @tTTtTTtTtTTTTtTtTtTTTTTTtttT point 0 SNP none {haw25989} 1315 CB6878_redo II 6808829 1 A G 255 1.00 63 62 0 30 30 @GGGgGGgGgGggggggGgGgggGGggGgGg point 0 SNP none {haw26048} 1316 CB6878_redo II 6878056 1 C T 255 1.00 63 62 0 15 15 @tTttTTTtTtTTttt point 0 SNP none {haw26160} 1317 CB6878_redo II 6896314 1 T A 255 1.00 63 62 0 41 41 @aaaaAAaAaAAAAAAaaAaaAAAAAaaAAaAAAAAaaaaAa point 0 SNP none {haw26186} 1318 CB6878_redo II 6908985 1 C T 255 1.00 63 62 0 27 27 @TTTTtTtTtttTTTtTTtttTtttTTt point 0 SNP none {haw26205} 1326 CB6878_redo II 6999589 1 G T 31 1.00 63 18 0 4 4 @tTTt point 0 nongenic 4600 into {C52E12.2a,C52E12.2b} 1327 CB6878_redo II 6999734 1 C A 199 1.00 63 62 0 10 10 @AAAAAAAaAA point 0 SNP none {haw26262} 1329 CB6878_redo II 7003347 1 T A 255 1.00 63 62 0 24 24 @AAaAAAAAaAAaAaAAAaAAAAaa point 0 missense GTA->GAA[Val->Glu] {C52E12.2a,C52E12.2b} 1333 CB6878_redo II 7123163 1 T C 215 1.75 63 62 0 17 17 @ccccccccccCcccccc point 0 nongenic,nongenic,nongenic -1432 upstream,-1441 upstream,983 into {F10E7.3},{F10E7.11},{F10E7.2} 1350 CB6878_redo II 7433510 1 A C 9 1.00 63 62 2 3 5 @CCc,. point 0 nongenic,nongenic -1685 upstream,-2180 upstream {K02A2.1},{K02A2.3} 1351 CB6878_redo II 7444114 1 A C 3 1.50 63 10 2 2 4 @.,Cc point 0 nongenic -2495 upstream {Y9D1A.1} 1352 CB6878_redo II 7584471 1 A C 55 3.44 63 24 3 4 7 @,..cccc point 0 nongenic -982 upstream {F35D2.4} 1353 CB6878_redo II 7584472 1 C A 69 2.88 63 34 2 5 7 @..aaaaA point 0 nongenic -983 upstream {F35D2.4} 1354 CB6878_redo II 7618212 1 G A 113 1.00 63 62 0 7 7 @Aaaaaaa point 0 SNP,three_prime_UTR none,none {haw26758},{R07G3.8} 1355 CB6878_redo II 7618213 1 T G 120 1.00 63 62 0 7 7 @Ggggggg point 0 three_prime_UTR none {R07G3.8} 1356 CB6878_redo II 7618214 1 G T 112 1.00 63 62 0 7 7 @Ttttttt point 0 three_prime_UTR none {R07G3.8} 1359 CB6878_redo II 7634324 1 G T 8 1.00 63 34 3 3 6 @,,,ttT point 0 nongenic,nongenic,nongenic -161 upstream,6330 into,7142 into {R153.1a},{R153.1b,R153.1c,R153.1d,R153.1e},{R153.1g} 1360 CB6878_redo II 7634326 1 T G 35 1.00 63 8 3 3 6 @,,,ggG point 0 nongenic,nongenic,nongenic -163 upstream,6332 into,7144 into {R153.1a},{R153.1b,R153.1c,R153.1d,R153.1e},{R153.1g} 1366 CB6878_redo II 7697397 1 C T 30 1.00 63 0 0 4 4 @tTtt point 0 missense GGA->GAA[Gly->Glu] {B0495.5.1,B0495.5.2} 1367 CB6878_redo II 7698554 1 A T 35 1.00 63 50 0 4 4 @tttt point 0 SNP none {haw26816} 1368 CB6878_redo II 7698555 1 C A 51 1.00 63 34 0 6 6 @aaaaAA point 0 SNP none {haw26817} 1369 CB6878_redo II 7698556 1 T C 52 1.00 63 34 0 6 6 @cccCCC point 0 nongenic,nongenic,nongenic,nongenic -124 upstream,-136 upstream,-621 upstream,43 downstream {B0495.5.1},{B0495.5.2},{B0495.2},{B0495.6} 1376 CB6878_redo II 7739393 1 C T 121 1.00 63 62 1 6 7 @,tTTTtT point 0 missense CCA->TCA[Pro->Ser] {B0228.4b} 162402 CB6878_redo II 7743769 96 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered non-exonic, 1447 to 1543 bp into,non-exonic, 18942 to 19038 bp into {B0228.4e},{B0228.4a,B0228.4c} 5964 CB6878_redo II 7745769 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,,tt indel 0 nongenic,nongenic,nongenic -3447 downstream,-6589 downstream,-6876 downstream {B0228.4e},{B0228.4a},{B0228.4c} 1381 CB6878_redo II 7799888 1 G T 27 1.00 63 62 5 7 12 @,,.,,tttTTTt point 0 nongenic,nongenic -11282 upstream,-5638 upstream {T05A6.1},{C06A8.9} 5966 CB6878_redo II 7803627 0 X X -1000 -999.99 -1000 -1000 1 1 2 @,cc indel 0 nongenic,nongenic -7544 upstream,-9377 upstream {T05A6.1},{C06A8.9} 1382 CB6878_redo II 7825761 1 T C 56 1.00 63 62 2 4 6 @cCcc.. point 0 nongenic,nongenic -3275 upstream,-6559 upstream {T05A6.4},{T09A5.14} 1383 CB6878_redo II 7871212 1 G A 36 1.00 63 62 1 3 4 @.AAA point 0 missense CCT->CTT[Pro->Leu] {T01H3.3.1,T01H3.3.2} 1386 CB6878_redo II 7913323 1 C A 255 1.00 63 62 0 25 25 @AaAAaaAaataAAaAAAaaaaaAAa point 0 SNP none {haw26997} 1387 CB6878_redo II 7960769 1 C G 255 1.00 63 62 0 20 20 @GGgGgGgggGgggGGgGggG point 0 SNP none {haw27047} 1388 CB6878_redo II 8033056 1 C G 14 1.00 63 4 2 3 5 @ggG.. point 0 nongenic -416 upstream {C08B11.4} 1389 CB6878_redo II 8033057 1 A C 5 1.00 63 14 2 2 4 @cC.. point 0 nongenic -417 upstream {C08B11.4} 1391 CB6878_redo II 8210524 1 G T 69 1.00 63 24 1 4 5 @TTtt, point 0 nongenic,nongenic -2243 upstream,69 downstream {M110.8},{M110.2} 1392 CB6878_redo II 8210525 1 T A 24 1.00 63 62 2 3 5 @Aaa,. point 0 nongenic,nongenic -2244 upstream,68 downstream {M110.8},{M110.2} 1393 CB6878_redo II 8227927 1 G C 255 1.00 63 62 0 39 39 @cCCcCCccccCccCcCcccccCCccCCCcCCcCcCccCC point 0 missense CGC->CCC[Arg->Pro] {M110.5a.1,M110.5a.2,M110.5b,M110.5c,M110.5d} 1394 CB6878_redo II 8227928 1 C G 255 1.00 63 62 0 40 40 @GGgGGggggGggGgGgggggGGggGGGgGGgGgGggGGGg point 0 silent CGC->CGG[Arg->Arg] {M110.5a.1,M110.5a.2,M110.5b,M110.5c,M110.5d} 1395 CB6878_redo II 8262636 1 A G 64 6.06 63 62 7 13 20 @g...GG.GGgGgGG.GGG.. point 0 nongenic,nongenic -1956 upstream,-3573 upstream {K01C8.1.1},{F35C11.6} 1396 CB6878_redo II 8262652 1 C T 152 7.88 63 62 4 17 21 @TtTtTT.TTT..tT.tTtTtt point 0 nongenic,nongenic -1940 upstream,-3589 upstream {K01C8.1.1},{F35C11.6} 1398 CB6878_redo II 8263031 1 G A 26 1.75 63 62 9 12 21 @aaa,,,a,aaaaaaa,,a,,, point 0 nongenic,nongenic -1561 upstream,-3968 upstream {K01C8.1.1},{F35C11.6} 1401 CB6878_redo II 8584093 1 C T 255 1.00 63 62 0 35 35 @TTtTTtttTTtTtTttTtTTtTTttTTTtTtTttt point 0 missense,SNP GGA->GAA[Gly->Glu],none {F54C9.11},{haw27317} 1402 CB6878_redo II 8622310 1 C A 4 1.00 63 22 3 3 6 @aAA,., point 0 nongenic,nongenic -404 upstream,176 downstream {T22C8.3},{T22C8.4} 1404 CB6878_redo II 8715377 1 C T 255 1.00 63 62 0 33 33 @tTtTTTTtttTttTTttTTttTtTttTTTtTtT point 0 SNP none {haw27384} 1405 CB6878_redo II 8743063 1 C G 27 1.00 63 8 1 4 5 @GggG. point 0 nongenic,nongenic,nongenic -5577 upstream,-591 upstream,-932 upstream {T01B7.8},{K08F8.1b.2},{K08F8.1b.1} 1406 CB6878_redo II 8748249 1 G C 17 1.00 63 30 2 4 6 @,C,cCc point 0 SNP none {snp_K08F8[1]} 1409 CB6878_redo II 8802488 1 T G 255 1.00 63 62 0 38 38 @ggggGgGGgGgggGGgggGggGGGGggGGGGGggggGg point 0 silent,SNP TCT->TCG[Ser->Ser],none {F07H5.8},{haw27428} 1413 CB6878_redo II 8894955 1 C T 255 1.00 63 62 0 23 23 @ttTttTttTttttttTtTTTtTt point 0 SNP none {haw27502} 5975 CB6878_redo II 8896592 1 X X -1000 -999.99 -1000 -1000 5 -3 2 @,.,.. indel -1 SNP none {uCE2-1805} 1414 CB6878_redo II 8903260 1 T C 84 1.00 63 30 4 10 14 @CCcccCcccc,.., point 0 nongenic,nongenic 1781 into,5298 into {B0457.1c},{B0457.1a,B0457.1b} 1415 CB6878_redo II 8903261 1 G T 31 1.00 63 62 6 9 15 @TTtttTttt.,..,. point 0 nongenic,nongenic 1780 into,5297 into {B0457.1c},{B0457.1a,B0457.1b} 1416 CB6878_redo II 8907371 1 C T 208 1.00 63 62 0 10 10 @tTtTTtTTTt point 0 SNP none {haw27506} 1417 CB6878_redo II 8916732 1 G A 163 1.00 63 62 0 9 9 @aaaaaaaaA point 0 nongenic,nongenic -4781 upstream,-5639 upstream {B0457.4},{B0457.6} 1429 CB6878_redo II 9090949 1 A G 41 1.00 63 62 4 5 9 @....GggGg point 0 nongenic 175 downstream {C07H4.1} 1430 CB6878_redo II 9090950 1 G T 63 1.00 63 40 3 5 8 @...TttTt point 0 nongenic 174 downstream {C07H4.1} 1431 CB6878_redo II 9092377 1 C T 255 1.00 63 62 0 19 19 @ttttTtTTtTTtTtttTtT point 0 SNP none {haw27664} 1434 CB6878_redo II 9181321 1 T A 33 1.00 63 10 1 5 6 @,aAAAa point 0 nongenic 2887 into {ZK1067.6} 5979 CB6878_redo II 9231569 0 X X -1000 -999.99 -1000 -1000 9 -5 4 @.,,,,,,cccgcc,.c indel 1 frameshift none {T26C5.1} 1436 CB6878_redo II 9331348 1 C T 255 1.00 63 62 0 20 20 @tTttttttTtTttTTttTtt point 0 SNP none {haw27818} 1439 CB6878_redo II 9418645 1 A G 54 1.00 63 62 2 4 6 @.,gGGg point 0 nongenic,nongenic,nongenic -1757 upstream,408 downstream,440 downstream {M176.4},{M176.3.1},{M176.3.2} 1441 CB6878_redo II 9427750 1 T C 42 1.00 63 50 4 5 9 @cCCCC,... point 0 nongenic -91 upstream {M176.5} 1442 CB6878_redo II 9428872 1 G A 255 1.00 63 62 0 25 25 @aaaaaaaaaAaAaaAaaaAaaaaAA point 0 SNP none {haw27856} 1443 CB6878_redo II 9436563 1 C T 255 1.00 63 62 0 25 25 @ttttttTtTtttttTTtttTTttTt point 0 SNP none {haw27860} 1444 CB6878_redo II 9493721 1 C T 17 1.00 63 62 3 4 7 @,.,Tttt point 0 nongenic -5539 upstream {T19H5.4a} 1447 CB6878_redo II 9576359 1 C A 8 1.00 63 10 5 6 11 @aAAaAa,,,.. point 0 nongenic,nongenic -16496 upstream,466 into {F35H8.4},{F35H8.5} 1448 CB6878_redo II 9576360 1 A C 10 1.00 63 8 5 6 11 @cCCcCc,,,.. point 0 nongenic,nongenic -16497 upstream,467 into {F35H8.4},{F35H8.5} 1458 CB6878_redo II 9693726 1 C G 5 1.50 63 2 2 4 6 @Tg..gg point 0 nongenic -1861 upstream {ZK1320.10.1} 1461 CB6878_redo II 9921485 1 G A 255 1.00 63 62 0 33 33 @AAaAAAAaaAaAAAAAAAaAaAAAAAAAAaaaA point 0 nongenic,nongenic -685 upstream,-993 upstream {C05C10.2a,C05C10.2b},{C05C10.1} 1462 CB6878_redo II 9964672 1 A G 4 1.00 63 12 1 4 5 @,gGGg point 0 SNP none {uCE2-1872} 1463 CB6878_redo II 10019098 1 A C 249 2.38 63 62 0 20 20 @ccCCCCCCcccccCcccCCC point 0 nongenic -3114 upstream {F52H3.7a} 1464 CB6878_redo II 10135441 1 G C 26 4.31 63 54 2 2 4 @,,CC point 0 nongenic,nongenic,nongenic -2137 upstream,-3693 upstream,569 into {F27E5.4b},{F27E5.5},{F27E5.4a} 1467 CB6878_redo II 10340121 1 T G 255 1.00 63 62 1 29 30 @GGgGGgggGGGGgGgggGgg.GGggGgggG point 0 missense CAT->CCT[His->Pro] {C07E3.2.1,C07E3.2.2} 5988 CB6878_redo II 10430280 1 X X -1000 -999.99 -1000 -1000 9 -6 3 @..,,.,.,. indel -1 SNP none {uCE2-1895} 1470 CB6878_redo II 10436909 1 A C 255 1.00 63 62 0 27 27 @CCCCCcccCCccCcCcCCCcCCccCCC point 0 SNP none {haw28333,snp_E04D5[5]} 1471 CB6878_redo II 10437067 1 G A 255 1.00 63 62 0 28 28 @aaaAAaaaaaAaAAaaaaaaaaaAAAaa point 0 SNP none {haw28334} 1472 CB6878_redo II 10473915 1 A G 255 1.00 63 62 0 26 26 @GgGgGgggGgGGgGGggGgGGGGGGG point 0 SNP none {haw28363} 1473 CB6878_redo II 10724355 1 C T 255 1.00 63 62 0 21 21 @tTTTtTtTTtTtTttttTtTt point 0 SNP none {haw28599} 1474 CB6878_redo II 10744305 1 C T 222 1.00 63 62 0 11 11 @ttTTttTTttt point 0 nongenic,nongenic 5108 into,5397 into {C52A11.4a,C52A11.4c,C52A11.4d,C52A11.4e,C52A11.4f},{C52A11.4g} 1475 CB6878_redo II 10779219 1 G T 218 1.00 63 62 0 13 13 @tttttTttttttt point 0 nongenic,nongenic,nongenic,nongenic -4234 upstream,-6153 upstream,355 into,898 into {C52A11.4d},{R06F6.1.1},{T19E10.1a},{T19E10.1b} 1476 CB6878_redo II 10779220 1 G A 219 1.00 63 62 0 13 13 @aaaaaAaaaaaaa point 0 nongenic,nongenic,nongenic,nongenic -4235 upstream,-6152 upstream,356 into,899 into {C52A11.4d},{R06F6.1.1},{T19E10.1a},{T19E10.1b} 1477 CB6878_redo II 10827063 1 C T 255 1.00 63 62 0 20 20 @TtTTTtTTTTttTTTtTtTt point 0 SNP none {haw28664,snp_VM106R[1]} 1478 CB6878_redo II 10827279 1 A T 57 1.00 63 0 2 5 7 @ttTTt., point 0 nongenic,nongenic,nongenic -3276 upstream,3062 into,354 downstream {R06F6.12},{M106.1},{VM106R.1} 1479 CB6878_redo II 10828430 1 C T 255 1.00 63 62 0 29 29 @tTttTTTTttTtTTTtttTTtttTtTTTt point 0 SNP none {haw28666} 1480 CB6878_redo II 10828577 1 G A 255 1.00 63 62 0 26 26 @AAAAaaAAAaAAaAaaaaAAaAaAaA point 0 SNP none {haw28667} 1481 CB6878_redo II 10829219 1 G A 255 1.00 63 62 0 21 21 @aAAAaaAaAAaaaaAAAaaAa point 0 SNP none {haw28668} 1483 CB6878_redo II 11092046 1 T C 255 1.00 63 62 0 22 22 @cCccCCCCcccCcccCcCCccC point 0 nongenic,nongenic -2665 upstream,-626 upstream {F45E10.1a,F45E10.1b,F45E10.1c,F45E10.1d},{C09H10.1} 1487 CB6878_redo II 11167283 1 T C 14 1.00 63 6 1 3 4 @,CcC point 0 nongenic -5027 upstream {K07C10.1} 5992 CB6878_redo II 11194996 1 X X -1000 -999.99 -1000 -1000 5 -3 2 @,..., indel -1 SNP none {uCE2-1963} 5994 CB6878_redo II 11332635 5 X X -1000 -999.99 -1000 -1000 7 -6 1 @.,.g...g, indel -5 nongenic -3288 upstream {T24F1.6a} 1497 CB6878_redo II 11551004 1 A C 27 1.50 63 20 1 3 4 @,ccC point 0 nongenic 993 into {F54D5.12.1} 1498 CB6878_redo II 11551005 1 C A 31 1.81 63 20 1 5 6 @,aaAAa point 0 nongenic 992 into {F54D5.12.1} 1500 CB6878_redo II 11717736 1 A G 20 1.00 63 62 2 2 4 @,.GG point 0 nongenic -2686 upstream {F13D12.3} 1501 CB6878_redo II 11719746 1 C G 19 1.00 63 32 1 4 5 @gggg. point 0 nongenic -676 upstream {F13D12.3} 1504 CB6878_redo II 11794523 1 A C 255 1.00 63 62 0 29 29 @CCCCCCCCCCcCCccCCCcCCCccccccc point 0 nongenic,nongenic -4429 upstream,2641 into {F43G6.11a,F43G6.11b},{F43G6.4} 1518 CB6878_redo II 12115353 1 C T 203 1.00 63 62 0 11 11 @ttttTtttttt point 0 SNP none {haw30080} 1519 CB6878_redo II 12170815 1 G A 255 1.00 63 62 0 20 20 @AAaAAaaaaaAAAAaAAAaA point 0 SNP none {haw30197} 1521 CB6878_redo II 12174493 1 G A 255 1.00 63 62 0 19 19 @AAAaAaAAAAaAAAaaaAa point 0 SNP none {haw30201} 1522 CB6878_redo II 12178809 1 C T 255 1.00 63 62 0 20 20 @ttTTttttttTttttTtTtt point 0 SNP none {haw30206} 1523 CB6878_redo II 12189092 1 T A 255 1.00 63 62 0 16 16 @aaAaaaaAaaaaaAaa point 0 three_prime_UTR none {Y57A10A.14} 1524 CB6878_redo II 12193173 1 G A 255 1.00 63 62 0 26 26 @aaAAAAaaAaaAAAAAAAAAaaaaAA point 0 nongenic 3382 into {Y57A10A.15} 1525 CB6878_redo II 12260333 1 C T 125 1.00 63 62 0 5 5 @TTTTT point 0 SNP none {haw30396} 1526 CB6878_redo II 12266285 1 G T 137 1.00 63 62 1 6 7 @,ttTTtT point 0 SNP none {haw30403} 1527 CB6878_redo II 12297335 1 T A 17 1.00 63 62 3 4 7 @,,,AAaa point 0 nongenic 2654 into {Y57A10A.31} 1528 CB6878_redo II 12313737 1 G A 255 1.00 63 62 0 23 23 @AAAAaaAAAaaaAAaaAaaAAAa point 0 nongenic,nongenic -5018 upstream,161 downstream {C50E10.9},{C50E10.10} 1530 CB6878_redo II 12370055 1 C A 255 1.00 63 62 0 15 15 @AaaaaAAAaaaaaAa point 0 SNP none {haw30684} 1531 CB6878_redo II 12387897 1 T A 255 1.00 63 62 0 19 19 @aaaAAAAAAAAaAaAAaAa point 0 SNP none {haw30711} 1540 CB6878_redo II 12556599 1 G A 7 1.00 63 2 2 3 5 @..aaa point 0 missense GAG->AAG[Glu->Lys] {F49C5.11} 1541 CB6878_redo II 12556600 1 A G 3 1.00 63 6 2 3 5 @..ggg point 0 missense GAG->GGG[Glu->Gly] {F49C5.11} 1542 CB6878_redo II 12562077 1 A C 13 1.00 63 62 4 4 8 @cCCC.... point 0 nongenic,nongenic -1903 upstream,-2020 upstream {F49C5.12},{F49C5.6} 1543 CB6878_redo II 12588489 1 T A 85 1.00 63 62 1 5 6 @AAAAA, point 0 nongenic,nongenic,nongenic,nongenic -17391 upstream,-7507 upstream,6201 into,6397 into {Y38E10A.7},{Y38E10A.5},{Y38E10A.6b},{Y38E10A.6a} 1544 CB6878_redo II 12595553 1 C T 239 1.00 63 62 0 11 11 @tTtttTtTttT point 0 SNP none {haw31224} 1554 CB6878_redo II 12658929 1 C T 255 1.00 63 62 0 27 27 @TTttttttTTttttTTtTtTtTtTTTt point 0 SNP none {haw31398} 1555 CB6878_redo II 12659508 1 A G 255 1.00 63 62 0 26 26 @GGgGGgGGGGGgGGGggGGGGGgggG point 0 nongenic,nongenic -9241 upstream,4241 into {Y38E10A.21},{Y38E10A.20} 1556 CB6878_redo II 12670938 1 A G 255 1.00 63 62 0 16 16 @gGGgggggGGGggggG point 0 SNP none {haw31411} 1557 CB6878_redo II 12677300 1 T G 69 1.00 63 38 1 4 5 @,gGgG point 0 silent GCA->GCC[Ala->Ala] {Y38E10A.23} 1558 CB6878_redo II 12677412 1 T G 255 1.00 63 62 0 13 13 @GggGggggGGgGg point 0 missense AAC->ACC[Asn->Thr] {Y38E10A.23} 1559 CB6878_redo II 12683679 1 A T 255 1.00 63 62 0 15 15 @TTttTtTTTTTtTTT point 0 nongenic,nongenic -10640 upstream,2944 into {Y46G5A.1a,Y46G5A.1b},{Y46G5A.2} 1560 CB6878_redo II 12684543 1 G A 255 1.00 63 62 0 14 14 @AAaAAaAAaaAaaA point 0 SNP none {haw31456} 1561 CB6878_redo II 12684928 1 G A 162 1.00 63 62 0 8 8 @AAAAAAAA point 0 SNP none {haw31457} 1562 CB6878_redo II 12717330 1 T G 56 1.00 63 62 2 5 7 @ggggg,, point 0 nongenic,nongenic,nongenic 1717 into,8041 into,8062 into {Y46G5A.1c},{Y46G5A.1b},{Y46G5A.1a} 1563 CB6878_redo II 12719765 1 A T 4 3.75 0 4 5 6 11 @,,,t,tT,ttT point 0 nongenic,nongenic,nongenic 4152 into,5606 into,5627 into {Y46G5A.1c},{Y46G5A.1b},{Y46G5A.1a} 1566 CB6878_redo II 12764190 1 G C 255 1.00 63 62 0 31 31 @CccCccccCcCcccACcCCCcCccccCcCCc point 0 SNP none {haw31561} 1567 CB6878_redo II 12764266 1 A C 191 1.00 63 52 1 9 10 @CCccCCCCc. point 0 nongenic 2861 into {Y46G5A.10} 1570 CB6878_redo II 12780403 1 T G 3 5.62 63 2 1 4 5 @G.GGG point 0 nongenic -724 upstream {Y46G5A.34} 1573 CB6878_redo II 12784485 1 T C 255 1.00 63 62 0 15 15 @CCccccCcCccCCCC point 0 SNP none {haw31598} 1583 CB6878_redo II 12829859 1 C A 168 1.00 63 62 0 10 10 @AAAAAAagaA point 0 nongenic,nongenic -756 upstream,-986 upstream {Y46G5A.24},{Y46G5A.23} 1590 CB6878_redo II 13023500 1 G C 22 1.00 63 46 3 5 8 @,,,CCccc point 0 nongenic,nongenic,nongenic -3059 upstream,-9260 upstream,2247 into {Y38F1A.10b},{F18A11.2},{Y38F1A.10a,Y38F1A.10c} 6005 CB6878_redo II 13023501 1 X X -1000 -999.99 -1000 -1000 7 -5 2 @,,,,... indel -1 SNP none {uCE2-2163} 1591 CB6878_redo II 13062610 1 T A 255 1.00 63 62 0 20 20 @aAaAAaAaAAaaaaAAaaaA point 0 SNP none {haw31867} 1592 CB6878_redo II 13063714 1 A G 67 1.00 63 62 0 4 4 @GGGG point 0 SNP none {snp_F42G4[4]} 1593 CB6878_redo II 13090005 1 T A 255 1.00 63 62 0 39 39 @aaAAaaaAAaaaAAaaaAaaAaAaAaaAaaAAaaAaaaa point 0 missense GAT->GAA[Asp->Glu] {Y81G3A.3} 1594 CB6878_redo II 13092153 1 G C 255 8.12 63 62 0 18 18 @CcCcCCCCcCCcccccCc point 0 SNP none {snp_Y81G3A[1]} 1595 CB6878_redo II 13092162 1 G T 255 2.31 63 62 0 16 16 @TTTtTTtttttTtttt point 0 SNP none {snp_Y81G3A[2]} 1596 CB6878_redo II 13092217 1 G A 255 1.00 63 62 0 18 18 @AAaaAAaaaAAAAAaAAa point 0 SNP none {haw31901,snp_Y81G3A[3]} 1597 CB6878_redo II 13097749 1 C G 73 1.56 63 62 0 7 7 @GAAGGGG point 0 nongenic,nongenic,nongenic -1202 upstream,407 downstream,435 into {Y81G3A.5b},{F29C12.3},{Y81G3A.5a} 1598 CB6878_redo II 13239531 1 G C 255 1.00 63 62 0 30 30 @CCCcCCcccCcccCCCCcCCcCccCCCccC point 0 missense GAC->GAG[Asp->Glu] {F15D4.4} 1599 CB6878_redo II 13350116 1 C A 255 1.00 63 62 0 29 29 @AaAAAAaaAAAaAAaAaAAaaAAAAAaaa point 0 SNP none {haw32310} 1600 CB6878_redo II 13371479 1 T A 255 1.00 63 62 0 22 22 @aAaAaAAaaaAaAAAAAaaAaa point 0 SNP none {haw32384} 1601 CB6878_redo II 13372962 1 G A 32 1.00 63 34 1 5 6 @,aaaaa point 0 nongenic,nongenic,nongenic -25169 upstream,-3357 upstream,2237 into {Y48C3A.11},{Y48C3A.12},{Y48C3A.20} 1602 CB6878_redo II 13378340 1 G A 223 1.00 63 62 0 9 9 @AAAAAaaaA point 0 SNP none {haw32413} 1606 CB6878_redo II 13385430 1 G C 3 3.62 56 0 1 4 5 @,cccc point 0 nongenic,nongenic -4238 upstream,3241 into {Y48C3A.14},{Y48C3A.12} 1607 CB6878_redo II 13385433 1 G C 3 3.62 56 2 1 4 5 @,cccc point 0 nongenic,nongenic -4235 upstream,3238 into {Y48C3A.14},{Y48C3A.12} 1608 CB6878_redo II 13385435 1 G C 3 3.62 56 2 1 4 5 @,cccc point 0 nongenic,nongenic -4233 upstream,3236 into {Y48C3A.14},{Y48C3A.12} 1610 CB6878_redo II 13408374 1 C A 169 1.00 63 62 0 6 6 @AAaaaa point 0 nongenic,nongenic,nongenic,nongenic -4178 upstream,1162 into,2021 into,2307 into {Y48C3A.18a},{Y48C3A.17b},{Y48C3A.17c},{Y48C3A.17a,Y48C3A.17d} 1613 CB6878_redo II 13434786 1 G T 112 1.25 63 62 0 5 5 @ttttt point 0 nongenic,nongenic 972 into,983 into {Y48E1C.4a},{Y48E1C.4b} 1615 CB6878_redo II 13440583 1 G T 255 1.00 63 62 0 26 26 @TTttTTTtTtTtttTtTTTTTTTTtT point 0 missense,SNP ACG->AAG[Thr->Lys],none {Y48E1C.3},{haw32539} 1616 CB6878_redo II 13452555 1 A G 255 1.06 63 62 0 19 19 @GGGgGggggggGgGgGggg point 0 nongenic,nongenic -5051 upstream,3796 into {E01G4.1},{E01G4.4} 1617 CB6878_redo II 13485389 1 T C 255 1.00 63 62 0 42 42 @ccccCCCCcccccccCcCCCCcCcCCCCCcCcCcCcCcCCCc point 0 silent TGT->TGC[Cys->Cys] {E01G4.6} 1618 CB6878_redo II 13528270 1 A G 255 1.00 63 62 0 38 38 @gGGgggGGGGgGGGGGGGgggGgGGgggGGgGgGgGGg point 0 nongenic,nongenic,nongenic 2857 into,2859 into,689 into {Y48E1B.14a.2},{Y48E1B.14a.1},{Y48E1B.14b} 1619 CB6878_redo II 13535801 1 A T 8 1.00 63 32 4 6 10 @tt.ttt..t. point 0 missense ATG->AAG[Met->Lys] {Y48E1B.2a,Y48E1B.2b.1,Y48E1B.2b.2} 1624 CB6878_redo II 13578367 1 A G 98 1.00 63 62 0 9 9 @GGgGgGGcG point 0 nongenic,nongenic,nongenic -3397 upstream,-7267 upstream,2535 into {Y48E1B.5},{Y48E1B.8},{Y48E1B.7} 1625 CB6878_redo II 13579405 1 T A 254 1.19 63 62 0 14 14 @AAAAAAaaAaaaaA point 0 nongenic,nongenic,nongenic -4435 upstream,-6229 upstream,3573 into {Y48E1B.5},{Y48E1B.8},{Y48E1B.7} 1626 CB6878_redo II 13579440 1 T A 161 1.38 63 62 0 10 10 @aAaaaAaaaa point 0 nongenic,nongenic,nongenic -4470 upstream,-6194 upstream,3608 into {Y48E1B.5},{Y48E1B.8},{Y48E1B.7} 1635 CB6878_redo II 13722005 1 C A 167 1.00 63 62 0 7 7 @AaAAAAA point 0 SNP none {haw33062} 1639 CB6878_redo II 13801366 1 C A 255 1.00 63 62 0 14 14 @AAAAAAAAaaaaaa point 0 SNP none {haw33213} 1640 CB6878_redo II 13835099 1 G C 9 1.00 63 62 3 3 6 @CcC,,, point 0 silent CGC->CGG[Arg->Arg] {F08G2.6} 1641 CB6878_redo II 13883909 1 G T 39 1.00 63 28 1 3 4 @tTT. point 0 nongenic,nongenic,nongenic -4653 upstream,1299 into,1300 into {Y51H1A.6a},{Y51H1A.5.2},{Y51H1A.5.1} 1644 CB6878_redo II 13985375 1 G T 17 6.12 0 16 0 23 23 @TTTTTTTTTtTTTTTTTtTtTTT point 0 nongenic -819 upstream {Y39G8B.4} 1650 CB6878_redo II 14019789 1 C T 7 1.00 63 44 2 2 4 @.t,T point 0 nongenic,nongenic -2920 upstream,1061 into {F01D5.9},{F01D5.10} 1652 CB6878_redo II 14171676 1 C T 255 1.00 63 62 0 18 18 @tttttTTTttttTtttTT point 0 SNP none {haw33776} 1653 CB6878_redo II 14211019 1 C G 255 1.00 63 62 0 25 25 @ggggGgGGGGggGGgGgggggggGG point 0 SNP none {haw33827} 1655 CB6878_redo II 14260657 1 A C 118 3.00 62 62 0 5 5 @CCCCC point 0 nongenic,nongenic -15895 upstream,4405 into {Y54G11A.3},{Y54G11A.1} 1656 CB6878_redo II 14261823 1 G C 71 1.00 63 62 0 5 5 @cccct point 0 SNP none {haw33932} 1659 CB6878_redo II 14276713 1 T C 255 1.00 63 62 0 17 17 @CCCccCcccCcCCcCCc point 0 silent,SNP TTG->CTG[Leu->Leu],none {Y54G11A.3},{haw33969} 1660 CB6878_redo II 14279456 1 C A 243 4.44 63 62 0 19 19 @aaaAaAAaaAAAaAaaaaa point 0 nongenic,nongenic -10400 upstream,2904 into {Y54G11A.1},{Y54G11A.3} 1661 CB6878_redo II 14311576 1 T C 255 1.00 63 62 0 25 25 @CCCcCCCcCCcCCCccCCCCCCCCc point 0 nongenic,nongenic -6483 upstream,-894 upstream {Y54G11A.14},{Y54G11A.13} 1664 CB6878_redo II 14337929 1 G T 5 4.00 0 2 0 7 7 @cTttttT point 0 SNP none {haw34038} 1675 CB6878_redo II 14406898 1 T C 255 1.00 63 62 0 34 34 @CccCCCccCCCCCcCCcccccCccCCCCCccccc point 0 silent,SNP TTT->TTC[Phe->Phe],none {F26H11.2c,F26H11.2d.1,F26H11.2d.2,F26H11.2e,F26H11.2f,F26H11.2g},{snp_F26H11[1]} 1676 CB6878_redo II 14464253 1 G T 58 1.00 63 62 1 4 5 @,TTTT point 0 nongenic 562 into {Y54G11B.1} 1677 CB6878_redo II 14464254 1 T G 70 1.00 63 58 1 6 7 @,GGGGGG point 0 nongenic 561 into {Y54G11B.1} 1681 CB6878_redo II 14727648 1 C A 255 1.00 63 62 0 20 20 @aaAAaaAAaaAaAaaaaAaa point 0 nongenic 305 into {C09F9.3a,C09F9.3b,C09F9.3c} 1682 CB6878_redo II 14732310 1 G A 255 1.00 63 62 0 19 19 @aaAaAAaAaaaAAAaAaaa point 0 nongenic -4357 upstream {C09F9.3a,C09F9.3b,C09F9.3c} 1686 CB6878_redo II 14796259 1 G T 255 1.00 63 62 0 29 29 @tTTtTTTttTtTtTTTtTTtTTTTTTTtt point 0 missense,missense,SNP GGG->GTG[Gly->Val],TGG->TGT[Trp->Cys],none {Y54E2A.11b.1,Y54E2A.11b.2},{Y54E2A.11a.1,Y54E2A.11a.2},{uCE2-2369} 1687 CB6878_redo II 14872831 1 C A 255 1.00 63 62 0 21 21 @aaAaAAaaaaaaaAaAaAaAa point 0 nongenic 2986 into {R05H10.3a,R05H10.3b} 1689 CB6878_redo II 14993339 1 T C 7 2.69 63 62 38 43 81 @,...,....C.,C,C.,C.C..CCCC,C,CC.ccCCc..c.Ccc.ccC.ccCc.c.cc.C.cccCc.c,.ccC.CC,.,.. point 0 nongenic 33 downstream {Y53F4B.7} 1693 CB6878_redo II 15043614 1 C T 162 1.38 63 62 0 14 14 @tTTTtTTTTTtTtT point 0 ncRNA none {Y53F4B.45} 1694 CB6878_redo II 15043625 1 C G 191 1.25 63 62 0 17 17 @GgGGGGGgGgGGGGGGg point 0 ncRNA none {Y53F4B.45} 1708 CB6878_redo II 15139452 1 C A 3 9.06 0 2 13 34 47 @aaA,Aa,A...A,AAaa,,AAAAaA,aAAAaaaAaAAAaa,A.aa,. point 0 nongenic,nongenic,nongenic -5528 upstream,4058 into,925 downstream {Y53F4B.24},{Y53F4B.25},{Y53F4B.26} 1709 CB6878_redo II 15141756 1 G A 3 7.75 0 2 4 5 9 @..,a,aaaa point 0 nongenic,nongenic,nongenic -4093 upstream,-872 upstream,3420 into {Y53F4B.27a},{Y53F4B.26},{Y53F4B.25} 1710 CB6878_redo II 15141761 1 T C 3 7.56 0 2 3 5 8 @,.,ccccc point 0 nongenic,nongenic,nongenic -4088 upstream,-877 upstream,3415 into {Y53F4B.27a},{Y53F4B.26},{Y53F4B.25} 1715 CB6878_redo III 53324 1 C G 3 1.00 63 28 1 3 4 @G,gg point 0 nongenic -4376 upstream {W05G11.2} 1727 CB6878_redo III 118298 1 T G 255 1.00 63 62 0 31 31 @ggGGGggGgGGgGggGgggGggGgggggggG point 0 silent GTT->GTG[Val->Val] {C29F9.5} 1728 CB6878_redo III 277155 1 G A 212 1.00 63 62 0 14 14 @AAAAAAAaAaAaaa point 0 nongenic,nongenic -6960 upstream,5727 into {Y50D7A.9},{Y50D7A.2} 1729 CB6878_redo III 346575 1 C A 80 8.06 63 62 10 13 23 @T....G,G.....AAaAAAaaAa point 0 nongenic,nongenic,nongenic,nongenic,nongenic -3334 upstream,1638 into,1769 into,1791 into,1858 into {Y50D7A.8},{W07B3.2a.2,W07B3.2b,W07B3.2c.2,W07B3.2f},{W07B3.2d},{W07B3.2c.1},{W07B3.2a.1} 1737 CB6878_redo III 498685 1 G A 3 1.75 0 0 0 4 4 @caAa point 0 nongenic 3905 into {F30H5.1} 1738 CB6878_redo III 498870 1 C A 70 3.12 63 62 19 31 50 @,aaAa,,,Aa,aAAaaa..aAaA,aa.,,,aaAa,,a,aaaa.aaa,a., point 0 nongenic 3720 into {F30H5.1} 1750 CB6878_redo III 513526 1 A G 39 1.00 63 0 0 4 4 @gggg point 0 SNP none {uCE3-597} 1751 CB6878_redo III 543654 1 A C 26 1.00 63 62 2 3 5 @CcC,. point 0 nongenic,nongenic,nongenic -13860 upstream,-16740 upstream,1591 into {B0353.1b},{T22F7.4},{T22F7.1} 1752 CB6878_redo III 612585 1 G T 255 1.00 63 62 0 28 28 @tTttTTtttTttTTTtTTTTtTTTtTTt point 0 nongenic,nongenic -2614 upstream,1702 into {T19C3.1},{T19C3.3} 1756 CB6878_redo III 691185 1 C T 255 1.00 63 62 0 26 26 @TtttttttttttTtTTtttttTtTTT point 0 silent,SNP GAG->GAA[Glu->Glu],none {W02B3.7},{haw37341} 1757 CB6878_redo III 703727 1 A G 3 5.06 0 24 7 12 19 @gGG..gg.,gg.G,.ggGg point 0 nongenic,nongenic,nongenic -2600 upstream,-7276 upstream,12108 into {C24A1.2a},{C24A1.3b},{C24A1.2b} 1758 CB6878_redo III 752175 1 G T 255 1.00 63 62 0 22 22 @TTTTTTTTTTTtTTTTtTtTtT point 0 nongenic,nongenic -5489 upstream,246 into {T17H7.4a.1,T17H7.4a.2,T17H7.4b.1,T17H7.4b.2,T17H7.4c.1,T17H7.4c.2,T17H7.4g.2},{T17H7.4a.3,T17H7.4b.3,T17H7.4c.3,T17H7.4j} 1770 CB6878_redo III 803906 1 G T 114 1.00 63 40 0 5 5 @TTTTT point 0 nongenic,nongenic,nongenic -7914 upstream,5449 into,5528 into {B0412.2},{B0412.3.2},{B0412.3.1} 1773 CB6878_redo III 897451 1 A C 255 1.00 63 62 0 28 28 @CCCCcCCcCcCCcCccCCCCCCcccccC point 0 missense CAG->CCG[Gln->Pro] {F23H11.2} 1776 CB6878_redo III 931533 1 T C 57 4.31 63 62 56 199 255 @CCCCC.CCCC.cC,CCCCC.CC.cC,,.C,CC.C.C.cc.CCcc.CcccCCCCcC,.ccccccCcc.CCC,cc..cCCCccc.cccCCcccccccCccc point 0 nongenic -5231 upstream {F23H11.8a,F23H11.8b.1,F23H11.8b.2,F23H11.8b.3} 1785 CB6878_redo III 947231 1 A G 142 1.00 63 62 0 6 6 @GGgggG point 0 nongenic,nongenic -965 upstream,603 downstream {T12B5.10},{T12B5.13} 1788 CB6878_redo III 979122 1 C G 3 1.00 63 2 1 4 5 @.gggg point 0 nongenic,nongenic,nongenic,nongenic -4125 upstream,-7109 upstream,1317 into,1750 into {R06B10.4a,R06B10.5.2},{R06B10.1},{R06B10.2},{R06B10.5.1} 1789 CB6878_redo III 979124 1 A G 3 1.00 63 2 1 4 5 @.gggg point 0 nongenic,nongenic,nongenic,nongenic -4123 upstream,-7111 upstream,1315 into,1752 into {R06B10.4a,R06B10.5.2},{R06B10.1},{R06B10.2},{R06B10.5.1} 1791 CB6878_redo III 979259 1 C G 3 1.00 63 2 1 4 5 @GGGG. point 0 nongenic,nongenic,nongenic,nongenic -3988 upstream,-7246 upstream,1180 into,1887 into {R06B10.4a,R06B10.5.2},{R06B10.1},{R06B10.2},{R06B10.5.1} 1806 CB6878_redo III 1211576 1 T G 9 2.00 63 8 1 4 5 @GGg,g point 0 nongenic,nongenic,nongenic -3365 upstream,2014 into,2064 into {Y119D3B.21},{Y119D3B.11.2},{Y119D3B.11.1} 1836 CB6878_redo III 1305160 1 C T 255 5.88 63 62 0 23 23 @TTTtTTTTTTTttTtttTTTTTT point 0 nongenic,nongenic 292 into,633 downstream {Y119D3A.1},{Y82E9BL.13} 1837 CB6878_redo III 1318411 1 C G 255 1.19 63 62 0 15 15 @GGgggGGgGGGGgGG point 0 SNP none {haw38527} 1838 CB6878_redo III 1323866 1 G A 255 1.00 63 62 0 30 30 @aaaAaaaaAaaAaaaAaAaaaAAAaAAAAa point 0 nongenic,nongenic -178 upstream,-4767 upstream {Y82E9BL.10},{Y82E9BL.18} 1847 CB6878_redo III 1550929 1 G T 3 3.00 63 0 1 4 5 @.tttt point 0 nongenic 3503 into {Y67D2.6} 1848 CB6878_redo III 1550936 1 G T 15 2.31 63 0 0 6 6 @tttttt point 0 nongenic 3496 into {Y67D2.6} 1851 CB6878_redo III 1579536 1 T A 190 7.44 63 62 8 17 25 @aa,a,,aa,,aA,aAaaaa,,aaaa point 0 nongenic 1249 into {Y22D7AL.7} 1852 CB6878_redo III 1579537 1 A T 191 6.81 63 62 8 17 25 @t,t,,tt,,tT,tTtttt,,ttttt point 0 nongenic 1248 into {Y22D7AL.7} 1855 CB6878_redo III 1629052 1 C T 207 1.00 63 62 0 8 8 @tttTTTtt point 0 SNP none {haw39277} 1859 CB6878_redo III 1636696 1 G A 126 1.00 63 62 0 5 5 @aaAaA point 0 SNP none {haw39295} 1860 CB6878_redo III 1636742 1 C A 190 1.00 63 62 0 7 7 @aAAaAaA point 0 SNP none {haw39297} 1861 CB6878_redo III 1636775 1 G A 132 1.00 63 62 0 8 8 @AaAAAaAA point 0 SNP none {haw39298} 1862 CB6878_redo III 1636782 1 G T 138 1.00 63 62 0 7 7 @tTTTtTT point 0 SNP none {haw39299} 1865 CB6878_redo III 1730777 1 G A 13 1.00 63 46 2 5 7 @.AA,AAa point 0 nongenic,nongenic,nongenic -8109 upstream,2314 into,2316 into {Y22D7AR.12},{Y22D7AR.13.2},{Y22D7AR.13.1} 1867 CB6878_redo III 1863224 1 G T 203 1.06 63 62 0 11 11 @tttttttttTt point 0 SNP none {haw39736} 1872 CB6878_redo III 2282476 1 G T 27 1.88 63 62 13 18 31 @TTtTtTTtttt.,.,t,.tT,..,tT.Tt.. point 0 nongenic,nongenic -8964 upstream,5211 into {Y54F10BM.15},{Y54F10BM.3} 1874 CB6878_redo III 2326012 1 C T 12 1.00 63 62 7 8 15 @tttttttt,,,,,,, point 0 nongenic,nongenic,nongenic -15056 upstream,877 into,895 downstream {Y54F10BM.11},{Y54F10BM.2},{Y54F10BM.12} 1876 CB6878_redo III 2327186 1 G A 126 1.00 63 62 0 5 5 @aAaaa point 0 nongenic,nongenic 279 into,297 downstream {Y54F10BM.12},{Y54F10BM.2} 1883 CB6878_redo III 2365479 1 T C 123 7.19 63 62 1 10 11 @CCCCCC,CCCC point 0 SNP none {haw40568} 1884 CB6878_redo III 2365480 1 A G 121 7.19 63 62 1 10 11 @GGGGGG,GGGG point 0 nongenic 787 into {H04J21.2} 1885 CB6878_redo III 2405323 1 C T 255 1.00 63 62 0 17 17 @tTttttTTtTtTTTTTT point 0 SNP none {haw40696} 1886 CB6878_redo III 2408041 1 T A 3 1.00 63 0 1 4 5 @AAA,A point 0 nongenic 1739 into {W04B5.4} 1889 CB6878_redo III 2412065 1 T G 14 1.00 63 62 1 7 8 @.GGGGGcc point 0 nongenic,nongenic,nongenic -1101 upstream,-6267 upstream,833 into {W04B5.4},{W04B5.3b},{W04B5.5} 1897 CB6878_redo III 2565617 1 G A 255 1.12 63 62 0 25 25 @aaaAaaaaaAaaaAAAaaaaaAaaA point 0 nongenic,nongenic -1638 upstream,556 into {Y54F10AM.11},{Y54F10AM.1} 1902 CB6878_redo III 2617654 1 T C 12 1.00 63 0 0 4 4 @CCCC point 0 nongenic,nongenic -1297 upstream,1192 into {Y71H2B.4},{Y71H2B.5} 1917 CB6878_redo III 2726797 1 C A 255 1.00 63 62 0 19 19 @AAaAAaAaaaaaAAAAAAa point 0 missense CCA->ACA[Pro->Thr] {Y71H2AM.7} 1920 CB6878_redo III 2809673 1 A G 169 1.00 63 62 0 6 6 @ggggGG point 0 nongenic 1320 into {Y71H2AM.3} 1921 CB6878_redo III 2822658 1 G C 166 8.69 63 62 0 12 12 @CCCCCCCCCccc point 0 nongenic,nongenic,nongenic -4401 upstream,-7696 upstream,2000 into {Y71H2AM.1.1,Y71H2AM.1.2},{Y71H2AM.23.1},{Y71H2AM.2} 162414 CB6878_redo III 3018114 61 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered non-exonic, 10509 to 10570 bp into,non-exonic, 10616 to 10677 bp into {Y55D5A.5b},{Y55D5A.5a} 1933 CB6878_redo III 3113221 1 C G 7 1.00 63 52 2 4 6 @,,gggg point 0 nongenic,nongenic,nongenic,nongenic -16087 upstream,-2479 upstream,380 into,803 into {Y53G8B.1},{Y53G8B.3},{Y53G8B.4a},{Y53G8B.4b} 1935 CB6878_redo III 3162633 1 A G 255 1.00 63 62 0 16 16 @GgGGGGgGgggGGGGg point 0 nongenic -3640 upstream {R148.5a,R148.5b} 1936 CB6878_redo III 3162638 1 A G 255 1.00 63 62 0 19 19 @GgGGGGgGgggGGGGgggG point 0 nongenic -3635 upstream {R148.5a,R148.5b} 1944 CB6878_redo III 3218479 1 T G 25 2.00 63 0 1 3 4 @.cgg point 0 nongenic,nongenic,nongenic,nongenic -7861 upstream,-9593 upstream,661 into,663 into {H09G03.1},{H09G03.2a,H09G03.2c},{H09G03.2b.2},{H09G03.2b.1} 1945 CB6878_redo III 3230685 1 T C 73 1.31 63 62 0 6 6 @cccCcC point 0 nongenic,nongenic -2405 upstream,43 downstream {Y53G8AL.1},{H09G03.1} 1946 CB6878_redo III 3245508 1 A T 255 1.25 63 62 0 21 21 @TTTtTTTTtTTtttTTttttt point 0 nongenic,nongenic 3057 into,3061 into {Y53G8AL.2.2},{Y53G8AL.2.1} 1947 CB6878_redo III 3254400 1 G C 122 1.00 63 62 0 5 5 @cCCcC point 0 nongenic,nongenic -1267 upstream,386 into {Y53G8AL.3},{Y53G8AM.4} 1948 CB6878_redo III 3255111 1 C A 234 1.00 63 62 0 12 12 @AAAaAAaaaaaa point 0 SNP none {haw42163} 1949 CB6878_redo III 3255125 1 C T 255 1.00 63 62 0 17 17 @ttttttTttTTTtTTTt point 0 SNP none {haw42164} 1950 CB6878_redo III 3255131 1 G T 255 1.00 63 62 0 16 16 @ttTttTTTtTTTttTt point 0 nongenic,nongenic -1998 upstream,478 into {Y53G8AL.3},{Y53G8AM.4} 1951 CB6878_redo III 3271710 1 A G 255 1.00 63 62 0 15 15 @GGgGGGGGGGGggGg point 0 SNP none {haw42190} 1952 CB6878_redo III 3271738 1 T A 255 1.00 63 62 0 22 22 @AAAAaaAaAaaaaaAAAaaAAA point 0 SNP none {haw42191} 1963 CB6878_redo III 3339895 1 C G 19 1.00 63 62 2 3 5 @..Ggg point 0 nongenic -4969 upstream {F45H7.2a,F45H7.2b} 1966 CB6878_redo III 3347670 1 A G 132 1.00 63 62 1 6 7 @gGggGG. point 0 nongenic,nongenic -13450 upstream,2806 into {F45H7.2c},{F45H7.2a,F45H7.2b} 1967 CB6878_redo III 3347671 1 G A 92 1.00 63 62 1 6 7 @aAaaAA. point 0 nongenic,nongenic -13449 upstream,2807 into {F45H7.2c},{F45H7.2a,F45H7.2b} 1968 CB6878_redo III 3347713 1 C T 103 1.00 63 62 0 4 4 @TTtT point 0 nongenic,nongenic -13407 upstream,2849 into {F45H7.2c},{F45H7.2a,F45H7.2b} 1969 CB6878_redo III 3347714 1 T C 102 1.00 63 62 0 4 4 @CCcC point 0 nongenic,nongenic -13406 upstream,2850 into {F45H7.2c},{F45H7.2a,F45H7.2b} 1971 CB6878_redo III 3373714 1 G A 255 1.00 63 62 0 27 27 @AAaaaaaaaaAAAaaaAAaAaAaaaaA point 0 SNP none {haw42340} 1972 CB6878_redo III 3377952 1 C G 28 1.00 63 12 3 6 9 @,.,gggggg point 0 nongenic,nongenic -7753 upstream,556 into {F45H7.4.1},{F45H7.6} 6027 CB6878_redo III 3385207 2 X X -1000 -999.99 -1000 -1000 4 -2 2 @,..c.cc indel -2 nongenic,nongenic -15008 upstream,2616 into {F45H7.4.1},{F45H7.6} 2004 CB6878_redo III 3387032 1 T C 178 1.75 63 56 0 9 9 @CCCCCcccc point 0 missense AAC->AGC[Asn->Ser] {C56G7.2} 2005 CB6878_redo III 3429127 1 A C 155 6.12 63 62 0 8 8 @cccccccc point 0 nongenic 721 into {K01A11.1} 6029 CB6878_redo III 3430900 0 X X -1000 -999.99 -1000 -1000 1 1 2 @.cc indel 0 nongenic -439 downstream {K01A11.1} 6030 CB6878_redo III 3436724 0 X X -1000 -999.99 -1000 -1000 6 -4 2 @..,,,,Gg indel 0 nongenic -5385 upstream {K01A11.1} 2011 CB6878_redo III 3442522 1 C T 58 1.00 63 4 0 4 4 @tTTt point 0 nongenic,nongenic -11183 upstream,1675 into {K01A11.1},{K01A11.4} 2012 CB6878_redo III 3445528 1 C A 27 9.19 28 4 0 5 5 @Aaaaa point 0 nongenic -1331 upstream {K01A11.4} 2014 CB6878_redo III 3463329 1 C G 255 1.00 63 62 0 15 15 @gGGGGggggGgggGG point 0 SNP none {haw42422} 2017 CB6878_redo III 3467137 1 T C 255 1.00 63 62 0 17 17 @CCCcCCCCCcccCccCc point 0 SNP,three_prime_UTR none,none {haw42435},{C34C12.3} 2018 CB6878_redo III 3467466 1 C T 255 1.00 63 62 0 19 19 @tTTtTtTTttTtTTTTTtt point 0 SNP,three_prime_UTR none,none {haw42438},{C34C12.3} 2020 CB6878_redo III 3468663 1 A C 255 1.00 63 62 0 18 18 @ccccccccCCCCCcCCcC point 0 nongenic,nongenic,nongenic -3324 upstream,1013 into,972 into {C34C12.5.1,C34C12.5.2},{C34C12.4.1},{C34C12.4.2} 2024 CB6878_redo III 3540491 1 C A 120 1.00 63 62 0 4 4 @aAAA point 0 SNP none {haw42478} 2025 CB6878_redo III 3599953 1 T C 33 1.00 63 16 1 3 4 @,CCc point 0 nongenic,nongenic,nongenic,nongenic -18275 upstream,4749 into,835 into,9236 into {C48D5.3},{C48D5.2c},{C48D5.2b},{C48D5.2a} 2026 CB6878_redo III 3606223 1 A T 255 1.00 63 62 0 16 16 @ttTtTTTTTTtTTTtt point 0 nongenic,nongenic,nongenic -24545 upstream,5324 into,5753 into {C48D5.3},{C48D5.2b,C48D5.2c},{C48D5.2a} 2027 CB6878_redo III 3611202 1 C A 195 1.00 63 62 0 9 9 @aAaaaaaaa point 0 SNP none {haw42583} 2029 CB6878_redo III 3613833 1 G T 255 1.00 63 62 0 12 12 @TtTttTTTTttt point 0 SNP none {haw42588} 2031 CB6878_redo III 3616756 1 C T 255 1.00 63 62 0 15 15 @TtttTtTtTTttTTt point 0 SNP none {haw42597} 2032 CB6878_redo III 3625872 1 T A 255 1.00 63 62 0 25 25 @aAAAaaaAAaAAaaaAaAAaAAAaa point 0 SNP none {haw42613} 2033 CB6878_redo III 3641475 1 G T 255 1.00 63 62 0 17 17 @TTttttttTtTtttTTt point 0 SNP none {haw42649} 2034 CB6878_redo III 3641888 1 G A 255 1.00 63 62 0 20 20 @AaAaaAaAaAAaaaaaAAAa point 0 SNP none {haw42650} 2035 CB6878_redo III 3645769 1 C A 191 1.00 63 62 1 9 10 @A,AAaAaaAa point 0 nongenic,nongenic 1404 into,1416 into {C46F11.1b},{C46F11.1a} 2036 CB6878_redo III 3645821 1 T G 255 1.00 63 62 0 27 27 @GGggGgGgGggGGGGGGGggggggggg point 0 nongenic,nongenic 1456 into,1468 into {C46F11.1b},{C46F11.1a} 2041 CB6878_redo III 3708947 1 A T 87 1.00 63 0 1 4 5 @TTTt, point 0 nongenic,nongenic -361 upstream,232 into {C14B1.10.1,C14B1.10.2},{C14B1.5} 6034 CB6878_redo III 3805251 0 X X -1000 -999.99 -1000 -1000 2 -1 1 @.A,G indel 0 nongenic,nongenic -500 downstream,-904 upstream {T24A11.3},{T24A11.2} 2050 CB6878_redo III 3995385 1 G A 170 1.00 63 62 0 7 7 @AAAAAAa point 0 SNP none {haw42814} 2061 CB6878_redo III 4056056 1 A T 175 1.00 63 62 0 9 9 @TTtTttTtt point 0 nongenic,nongenic -19242 upstream,1893 into {T02C12.1},{E03A3.2} 2062 CB6878_redo III 4056057 1 T A 177 1.00 63 62 0 10 10 @AAaAaaAaaa point 0 nongenic,nongenic -19243 upstream,1892 into {T02C12.1},{E03A3.2} 2063 CB6878_redo III 4056058 1 A C 172 1.00 63 62 0 9 9 @CcCccCccc point 0 nongenic,nongenic -19244 upstream,1891 into {T02C12.1},{E03A3.2} 6040 CB6878_redo III 4059721 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @..,.CCCc indel 0 inframe none {E03A3.4} 2064 CB6878_redo III 4112942 1 G C 255 1.00 63 62 1 27 28 @cCc,cccccccccCCcccCccCCccccc point 0 SNP none {haw42904} 2075 CB6878_redo III 4209221 1 C A 223 1.00 63 62 0 11 11 @AAaAAAaAAAA point 0 nongenic,nongenic -1312 upstream,983 downstream {F43C1.1},{R74.8a} 2076 CB6878_redo III 4209222 1 A C 224 1.00 63 62 0 12 12 @CCcCCCcCCCCc point 0 nongenic,nongenic -1311 upstream,984 downstream {F43C1.1},{R74.8a} 2077 CB6878_redo III 4209243 1 C A 209 1.00 63 62 0 10 10 @aAAAAAAaaA point 0 nongenic -1290 upstream {F43C1.1} 2078 CB6878_redo III 4209244 1 G C 212 1.00 63 62 0 10 10 @cCCCCCCccC point 0 nongenic -1289 upstream {F43C1.1} 2079 CB6878_redo III 4286569 1 C T 255 1.38 63 62 0 27 27 @ttTTTTTTTTTTTTTTTTTtTTttTtT point 0 SNP none {haw42951} 2083 CB6878_redo III 4440341 1 G A 255 1.00 63 62 0 25 25 @AAAaaaaaaaaAAaaAAAAaaAaAA point 0 SNP none {haw42977,snp_C28A5[2]} 2084 CB6878_redo III 4440871 1 T A 252 1.00 63 62 0 14 14 @AAaAAaaAAAAaAa point 0 SNP none {haw42978} 2087 CB6878_redo III 4484031 1 T C 21 1.00 63 2 1 4 5 @CcCC, point 0 nongenic,nongenic -5292 upstream,-6480 upstream {C07G2.1a.1},{F56F3.6.1} 2089 CB6878_redo III 4507707 1 C A 255 1.00 63 62 0 45 45 @AAaaAaAAAaAaaaAaAAaaaAaAAAAaaAAAAAaaaAAAaaAAa point 0 five_prime_UTR,missense none,ATG->ATT[Met->Ile] {C07G2.3b.1,C07G2.3b.2,C07G2.3b.6},{C07G2.3a} 2093 CB6878_redo III 4539053 1 T G 3 1.00 63 0 1 4 5 @,GGcg point 0 nongenic,nongenic 1537 into,1551 into {M88.1.2},{M88.1.1} 2095 CB6878_redo III 4539056 1 T C 3 1.00 63 0 1 4 5 @,CGcc point 0 nongenic,nongenic 1534 into,1548 into {M88.1.2},{M88.1.1} 2096 CB6878_redo III 4605000 1 T A 35 1.00 63 62 2 4 6 @,,AAaN point 0 nongenic,nongenic -11613 upstream,7302 into {F10F2.3},{F10F2.1} 2097 CB6878_redo III 4612784 1 T C 27 1.00 63 62 1 4 5 @CccC. point 0 nongenic,nongenic -3829 upstream,-482 upstream {F10F2.3},{F10F2.1} 2098 CB6878_redo III 4614341 1 T C 34 1.00 63 62 2 3 5 @,,CcC point 0 nongenic,nongenic -2039 upstream,-2272 upstream {F10F2.1},{F10F2.3} 6046 CB6878_redo III 4640495 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,,Gg indel 0 inframe none {F10F2.5} 2103 CB6878_redo III 4712952 1 C G 255 1.00 63 62 0 35 35 @gggGgGGgGgggggGGGgggggggggGgGgggggG point 0 missense,SNP TGG->TGC[Trp->Cys],none {T04A8.15},{haw43017,uCE3-875} 2104 CB6878_redo III 4761634 1 G A 255 1.00 63 62 0 25 25 @aAAaAaAaAaaAAaaaAAAAAaAAa point 0 SNP none {haw43024} 2105 CB6878_redo III 4808803 1 G C 8 1.00 63 48 2 2 4 @,,Cc point 0 nongenic,nongenic -128 upstream,-130 upstream {C38D4.6a.1,C38D4.6b.1},{C38D4.6a.2,C38D4.6b.2} 2106 CB6878_redo III 4845216 1 A T 255 1.00 63 62 0 31 31 @ttTTTtttTtTttTTTTTttTTTtttTtTTt point 0 missense,SNP AAT->ATT[Asn->Ile],none {F26A1.2},{haw43039} 2107 CB6878_redo III 4947904 1 T C 36 1.00 63 62 4 5 9 @ccCCC,.., point 0 nongenic,nongenic -4179 upstream,636 downstream {C26E6.2},{C26E6.3} 6049 CB6878_redo III 4962072 0 X X -1000 -999.99 -1000 -1000 5 -2 3 @..,..GG indel 0 nongenic,nongenic,nongenic,nongenic -296 downstream,-3550 upstream,-396 upstream,-930 downstream {C27F2.9},{C27F2.2a},{C27F2.5.2},{C27F2.5.1} 2108 CB6878_redo III 4962073 1 T A 14 1.00 63 62 3 4 7 @aAaa,,. point 0 nongenic,nongenic,nongenic,nongenic -3548 upstream,-397 upstream,298 into,929 into {C27F2.2a},{C27F2.5.2},{C27F2.9},{C27F2.5.1} 2116 CB6878_redo III 4983227 1 A G 33 1.00 63 0 2 3 5 @,,GGg point 0 SNP none {haw43062} 2118 CB6878_redo III 5030205 1 G T 181 1.00 63 62 1 8 9 @,TTtTtTtt point 0 nongenic,nongenic -686 upstream,607 downstream {R144.1},{R144.2a} 2120 CB6878_redo III 5032432 1 C G 48 1.00 63 20 1 4 5 @GGgg, point 0 nongenic,nongenic -4200 upstream,1541 into {C45G9.6b},{R144.1} 2121 CB6878_redo III 5032433 1 T C 20 1.00 63 48 2 4 6 @CCcc,, point 0 nongenic,nongenic -4199 upstream,1542 into {C45G9.6b},{R144.1} 2124 CB6878_redo III 5066883 1 C A 6 1.00 63 10 2 2 4 @,.AA point 0 nongenic,nongenic -2145 upstream,1803 into {C45G9.2},{C45G9.11} 2126 CB6878_redo III 5081847 1 A T 255 1.00 63 62 0 24 24 @ttTtTttttTTTtTTTTttTTTTT point 0 SNP none {haw43089,pas48342} 2130 CB6878_redo III 5105940 1 C G 37 1.00 63 10 1 3 4 @gGG, point 0 missense GCG->GGG[Ala->Gly] {F54D8.6} 2131 CB6878_redo III 5105941 1 G C 10 1.00 63 36 2 3 5 @cCC,, point 0 silent GCG->GCC[Ala->Ala] {F54D8.6} 2132 CB6878_redo III 5153927 1 T A 255 1.00 63 62 0 23 23 @AaAAaAAAaAaaAAAAAAaaAAA point 0 missense GAT->GAA[Asp->Glu] {Y54H5A.1.1,Y54H5A.1.2} 2133 CB6878_redo III 5195032 1 C A 255 1.00 63 62 0 32 32 @AAAAaaaAaAaAAaaAaAAAaAAAAaaAAaaA point 0 missense,SNP ACA->AAA[Thr->Lys],none {K10D2.1a},{haw43117} 2134 CB6878_redo III 5235011 1 A C 255 1.00 63 62 0 27 27 @CCCcCCcCcCccCCCCcCccCCCCCCC point 0 nongenic,nongenic,nongenic,nongenic -1356 upstream,436 into,554 downstream,653 downstream {C34E10.4a},{C34E10.11},{C34E10.5.1},{C34E10.5.2} 2135 CB6878_redo III 5309065 1 G T 244 1.00 63 62 1 17 18 @TTTTTtTTttTTtTTtT. point 0 missense CGG->CTG[Arg->Leu] {F52C9.7.1,F52C9.7.2} 2149 CB6878_redo III 5467691 1 A G 18 1.00 63 14 1 3 4 @,GGg point 0 three_prime_UTR none {F48E8.2} 162415 CB6878_redo III 5706862 74 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered codon 491 to codon 516 (4 % of 568 codons) {B0336.11a} 2158 CB6878_redo III 5722045 1 A C 61 1.00 63 14 1 3 4 @ccC, point 0 nongenic -753 upstream {B0336.1} 2159 CB6878_redo III 5722046 1 T A 15 1.00 63 60 2 2 4 @aA,. point 0 nongenic -752 upstream {B0336.1} 2160 CB6878_redo III 5762032 1 C G 72 5.31 63 12 1 5 6 @,ggggg point 0 ncRNA none {B0244.t3} 2161 CB6878_redo III 5762033 1 G C 96 5.31 63 12 1 5 6 @,ccccc point 0 ncRNA none {B0244.t3} 2168 CB6878_redo III 5814252 1 T C 255 1.00 63 62 0 23 23 @ccccccCccccccCcccCccCcc point 0 SNP none {haw43460} 6062 CB6878_redo III 5814707 0 X X -1000 -999.99 -1000 -1000 6 -5 1 @.,,,.g.g indel 3 nongenic -289 upstream {R12B2.7} 2171 CB6878_redo III 5867714 1 A G 255 1.00 63 62 0 23 23 @gGggGgGGGGgGGgGGGGgggGg point 0 missense ATT->ACT[Ile->Thr] {F01F1.10a,F01F1.10b,F01F1.10c} 2172 CB6878_redo III 5953899 1 A G 126 1.00 63 62 0 11 11 @GGGGGGgGGGg point 0 missense TCT->CCT[Ser->Pro] {F25B5.7a,F25B5.7c} 2173 CB6878_redo III 5953900 1 T A 117 1.00 63 62 0 10 10 @AAAAAaAAAa point 0 missense AAA->AAT[Lys->Asn] {F25B5.7a,F25B5.7c} 2174 CB6878_redo III 5953904 1 G T 141 1.00 63 62 0 10 10 @TTtTTTtTTT point 0 missense CCA->CAA[Pro->Gln] {F25B5.7a,F25B5.7c} 2177 CB6878_redo III 5962999 1 C T 255 1.00 63 62 0 20 20 @tTttTTTTTttttttttttt point 0 SNP none {haw43492} 2178 CB6878_redo III 6033358 1 A T 55 1.00 63 62 0 4 4 @TTTg point 0 missense TCC->ACC[Ser->Thr] {ZK328.7a} 2180 CB6878_redo III 6206572 1 T A 255 1.00 63 62 0 21 21 @AaAaaAAAAaaaaaaAaaAAa point 0 nongenic,nongenic,nongenic -171 upstream,-173 upstream,-425 upstream {C23G10.3.1},{C23G10.3.2},{C23G10.8} 2181 CB6878_redo III 6217167 1 G A 255 1.00 63 62 0 22 22 @AaaaAAaaAAaaaaaaaAAAaA point 0 nongenic,nongenic -1681 upstream,-3329 upstream {C23G10.11},{T12A2.16b} 2182 CB6878_redo III 6229465 1 C T 255 1.00 63 62 0 16 16 @TTTtTtTttTTttTtt point 0 SNP none {haw43535} 2183 CB6878_redo III 6231877 1 C T 255 1.00 63 62 0 25 25 @tTTtTtttTTtTttTtTTtttTtTt point 0 SNP none {haw43536} 6073 CB6878_redo III 6304028 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @,.,Cc indel 0 nongenic,nongenic -5293 upstream,-865 upstream {F47D12.1a,F47D12.1b,F47D12.1c,F47D12.1d},{F47D12.9a.1} 2189 CB6878_redo III 6306755 1 G T 255 1.00 63 62 0 22 22 @tttTtTTTTttTtttTtTttTT point 0 nongenic,nongenic -2565 upstream,-3592 upstream {F47D12.1a,F47D12.1b,F47D12.1c,F47D12.1d},{F47D12.9a.1} 2190 CB6878_redo III 6321514 1 C A 255 1.00 63 62 0 39 39 @AaaAAAaAAAAaaaAaaaaaAAaaaaaAAaAaAaAaAaA point 0 nongenic,nongenic,nongenic,nongenic 186 into,724 downstream,725 downstream,747 downstream {F47D12.10},{C56G2.5},{F47D12.1c},{F47D12.1b} 2196 CB6878_redo III 6371224 1 A G 255 1.00 63 62 0 26 26 @ggggGgGgGgGgGggGGggggGGggg point 0 missense,SNP GAT->GGT[Asp->Gly],none {C16A3.8},{haw43559} 2197 CB6878_redo III 6529796 1 C T 154 1.00 63 62 0 6 6 @TTtTTt point 0 nongenic,nongenic,nongenic -2702 upstream,-4234 upstream,1656 into {C09E7.1},{C09E7.3},{C09E7.2} 2198 CB6878_redo III 6619216 1 C T 255 1.00 63 62 0 27 27 @TTttTTtTTTTTTTtTTtTtTTTttTT point 0 missense,SNP CTC->TTC[Leu->Phe],none {Y40D12A.1a},{haw43601} 2199 CB6878_redo III 6626308 1 G C 84 1.81 63 62 0 5 5 @Ccccc point 0 nongenic,nongenic -1396 upstream,-2636 upstream {C13B9.3},{C13B9.1.1,C13B9.1.2} 2200 CB6878_redo III 6626309 1 C A 75 2.00 63 62 0 4 4 @aaaa point 0 nongenic,nongenic -1397 upstream,-2635 upstream {C13B9.3},{C13B9.1.1,C13B9.1.2} 2210 CB6878_redo III 6710989 1 A C 129 1.00 63 62 1 7 8 @CCCCcCC. point 0 nongenic,nongenic -891 upstream,-994 upstream {F37A4.5},{F37A4.8} 2214 CB6878_redo III 6923579 1 G A 154 1.00 63 62 0 8 8 @AAAAAAAA point 0 SNP none {haw43734} 2227 CB6878_redo III 6985564 1 T A 5 1.00 63 62 2 2 4 @aA.. point 0 nongenic -4541 upstream {C06E8.3b} 2232 CB6878_redo III 6990261 1 T C 255 1.00 63 62 0 19 19 @CcCCCcCcCccCCCcCcCc point 0 five_prime_UTR,SNP none,none {C06E8.3b,C06E8.3c},{haw43782,pas23121} 6081 CB6878_redo III 7013024 0 X X -1000 -999.99 -1000 -1000 3 -2 1 @,.,aAaAA indel 0 nongenic,nongenic -3944 downstream,-7726 upstream {F11H8.2},{C06E8.5} 2233 CB6878_redo III 7013479 1 G A 255 1.00 63 62 0 42 42 @AAAAAAaaaaaAaAAaaaaaaAaAaaaaAAaaAAAAAAaaaa point 0 nongenic,nongenic -8181 upstream,4400 into {C06E8.5},{F11H8.2} 2234 CB6878_redo III 7021096 1 T G 79 1.00 63 62 0 4 4 @GGGG point 0 nongenic,nongenic,nongenic -3 upstream,-561 upstream,-721 upstream {F11H8.1.1},{F11H8.3},{F11H8.1.2} 2235 CB6878_redo III 7028423 1 T A 235 1.00 63 62 0 13 13 @aaaaaaAaAaaaa point 0 missense,SNP ACA->TCA[Thr->Ser],none {F11H8.4a,F11H8.4b},{haw43822} 2238 CB6878_redo III 7028623 1 A T 255 1.00 63 62 0 23 23 @TtTTtttTTTTttTTtTTTTTTt point 0 SNP none {haw43823} 2239 CB6878_redo III 7028658 1 C T 255 1.00 63 62 0 18 18 @TTTTTTttTtTTTTTTTt point 0 missense,SNP GAA->AAA[Glu->Lys],none {F11H8.4a,F11H8.4b},{haw43824} 2240 CB6878_redo III 7033325 1 T G 255 1.00 63 62 0 34 34 @GGGGGGgGgGgGGgGGGgGGGgggGgggGggGGg point 0 nongenic -4195 upstream {F11H8.4a,F11H8.4b} 2241 CB6878_redo III 7047284 1 A C 16 1.00 63 62 2 4 6 @CCCc., point 0 nongenic,nongenic -1628 upstream,-9223 upstream {R01H2.7},{R01H2.2} 2246 CB6878_redo III 7118005 1 G A 255 1.00 63 62 0 19 19 @aAAAAAAAAAAaAAAAaaA point 0 SNP none {haw43886} 2247 CB6878_redo III 7152291 1 A G 141 9.38 63 62 1 17 18 @gGGGGGgGGggggG,ggG point 0 nongenic,nongenic -1772 upstream,1408 into {K04G7.3b},{K04G7.3a} 2248 CB6878_redo III 7189698 1 C T 255 1.00 63 62 0 18 18 @tTTTtTtTTttTTttTTt point 0 SNP none {haw43924,pas23502,uCE3-991} 2249 CB6878_redo III 7214104 1 A C 255 1.00 63 62 0 20 20 @CCCccCCCccCccccCcCCc point 0 missense AGC->CGC[Ser->Arg] {R151.2a,R151.2b.1,R151.2b.2,R151.2b.3,R151.2b.4,R151.2b.5,R151.2c,R151.2d.1,R151.2d.2} 2250 CB6878_redo III 7235776 1 C G 21 3.19 30 0 0 6 6 @GGGGGG point 0 nongenic,nongenic -1645 upstream,-3178 upstream {T20H4.5},{T20H4.3a,T20H4.3b} 2255 CB6878_redo III 7236655 1 A G 101 3.00 63 16 0 4 4 @gggg point 0 nongenic,nongenic -2299 upstream,-2524 upstream {T20H4.3a,T20H4.3b},{T20H4.5} 2256 CB6878_redo III 7236657 1 C A 107 3.00 63 62 0 4 4 @aaaa point 0 nongenic,nongenic -2297 upstream,-2526 upstream {T20H4.3a,T20H4.3b},{T20H4.5} 6087 CB6878_redo III 7238031 2 X X -1000 -999.99 -1000 -1000 7 -4 3 @,,,,ggg,,, indel -2 nongenic,nongenic -3900 upstream,-922 upstream {T20H4.5},{T20H4.3a,T20H4.3b} 2257 CB6878_redo III 7253849 1 T C 44 1.00 63 46 2 4 6 @cCcc.. point 0 nongenic,nongenic -5089 upstream,-6136 upstream {B0361.4},{T21D11.1} 6089 CB6878_redo III 7272185 4 X X -1000 -999.99 -1000 -1000 7 -5 2 @.,.,.,. indel -4 SNP none {uCE3-1001} 2258 CB6878_redo III 7325085 1 G T 255 1.00 63 62 0 35 35 @TTTtTtTTtTTtTtTTtTTTTTTTTTTTtttTttt point 0 missense,SNP CCC->CAC[Pro->His],none {F56C9.11},{haw44071,pas23608} 2261 CB6878_redo III 7347743 1 G T 246 1.00 63 62 0 12 12 @tttTTtttTTTt point 0 nongenic,nongenic,nongenic -665 upstream,-667 upstream,579 into {F08F8.7.1},{F08F8.7.3},{F08F8.8} 2318 CB6878_redo III 7494922 1 A C 13 1.00 63 8 1 3 4 @CcC. point 0 nongenic,nongenic -5922 upstream,320 downstream {K07D8.1},{C07H6.5.1} 2320 CB6878_redo III 7526828 1 A T 255 1.00 63 62 0 21 21 @TtTTtTtTtTtTTTTtTTttT point 0 SNP none {haw44214} 6090 CB6878_redo III 7528175 0 X X -1000 -999.99 -1000 -1000 2 2 4 @.. indel 0 nongenic,nongenic 417 downstream,420 downstream {C07H6.7.2},{C07H6.7.1} 6093 CB6878_redo III 7587556 0 X X -1000 -999.99 -1000 -1000 3 0 3 @.,.TT indel 0 nongenic,nongenic,nongenic,nongenic -2945 downstream,-3295 downstream,-3428 downstream,-4654 upstream {R13A5.1a.2,R13A5.1b,R13A5.1d},{R13A5.1a.1},{R13A5.1c},{R13A5.10} 2323 CB6878_redo III 7587557 1 G T 15 1.00 63 34 2 3 5 @tTt,, point 0 nongenic,nongenic,nongenic,nongenic -4655 upstream,2947 into,3297 into,3430 into {R13A5.10},{R13A5.1a.2,R13A5.1b,R13A5.1d},{R13A5.1a.1},{R13A5.1c} 2324 CB6878_redo III 7588318 1 A G 255 1.00 63 62 0 27 27 @gGgggGgGggGGGggGGGgGggggggg point 0 SNP none {haw44283} 2330 CB6878_redo III 7643354 1 T A 155 1.00 63 62 0 7 7 @aaaaaAa point 0 SNP none {haw44321} 2342 CB6878_redo III 7708718 1 G T 185 6.00 63 62 0 12 12 @ttttTttttttt point 0 nongenic,nongenic -3660 upstream,682 into {C03B8.3},{C03B8.4} 2344 CB6878_redo III 7805649 1 T A 255 1.00 63 62 0 24 24 @aAaaAaaaaAAAAAAaaaaAAAAa point 0 nongenic,nongenic -10312 upstream,-8659 upstream {C08C3.4a},{C08C3.1b} 2347 CB6878_redo III 7874571 1 C A 12 1.00 63 32 2 3 5 @aaA.. point 0 nongenic 865 into {C02C2.1} 6095 CB6878_redo III 7882069 0 X X -1000 -999.99 -1000 -1000 10 2 12 @,..,,,,,C,,ccc indel 0 nongenic,nongenic -3302 upstream,-969 downstream {C02C2.5},{ZK688.9} 2348 CB6878_redo III 7924181 1 C T 253 1.00 63 62 0 12 12 @TTTttttttttt point 0 SNP none {haw44542} 2349 CB6878_redo III 7958663 1 C T 255 1.00 63 62 0 28 28 @TtTtTtTtTttTttTtttTttTTTTttT point 0 SNP none {haw44573} 2350 CB6878_redo III 7976022 1 T C 255 1.00 63 62 0 36 36 @CCccCCcCcCCCCCCCcCcCcCcccCcCCCccCCCc point 0 nongenic,nongenic,nongenic -2707 upstream,1232 into,865 into {F54H12.6},{F54H12.1a},{F54H12.1b,F54H12.1c.1,F54H12.1c.2} 2351 CB6878_redo III 7992431 1 G T 255 1.00 63 62 0 24 24 @TtTTtTTttTTttttTtTtttttT point 0 nongenic,nongenic -11893 upstream,1715 into {C06G4.6},{C06G4.5} 2356 CB6878_redo III 8064604 1 C T 255 1.00 63 62 0 25 25 @tttttTTTTttttTttTTtTttttT point 0 SNP none {haw44619,snp_K12H4[1]} 2359 CB6878_redo III 8096324 1 T C 255 1.00 63 62 1 37 38 @CCCc,ccCCCcccCCcCCcCCCCcCCCCCccCCCCCCc point 0 nongenic,nongenic 336 downstream,93 downstream {K06H7.8},{K06H7.2} 2360 CB6878_redo III 8124694 1 G A 255 1.00 63 62 0 23 23 @aaaaaAAaAaaaAAaaaaaaaaa point 0 SNP none {haw44646} 2361 CB6878_redo III 8130396 1 G A 255 1.00 63 62 0 39 39 @AAaAaAAAaaAaAaAaAaAaAaaAaAAaAAaAAAAaAaa point 0 SNP none {haw44651} 6099 CB6878_redo III 8147226 0 X X -1000 -999.99 -1000 -1000 6 -4 2 @,.,,..tt indel 1 nongenic -1673 upstream {D2007.3} 2362 CB6878_redo III 8147227 1 G T 18 1.00 63 52 0 6 6 @TTttaa point 0 nongenic -1671 upstream {D2007.3} 2363 CB6878_redo III 8154517 1 T A 255 1.00 63 62 0 33 33 @AaAaAAAaaaaAaaaAaaAAaaAAAaAaaAaaA point 0 SNP none {haw44660} 2364 CB6878_redo III 8191059 1 C G 14 2.00 0 0 0 4 4 @gggG point 0 nongenic -678 upstream {C50C3.1} 2369 CB6878_redo III 8194456 1 C G 38 1.00 63 32 1 4 5 @gGGa, point 0 nongenic,nongenic,nongenic,nongenic -8553 upstream,377 into,682 into,689 downstream {C30A5.5},{C50C3.9b},{C50C3.9a},{C50C3.1} 2370 CB6878_redo III 8194457 1 A C 32 1.00 63 38 2 3 5 @cCC., point 0 nongenic,nongenic,nongenic,nongenic -8552 upstream,376 into,683 into,690 downstream {C30A5.5},{C50C3.9b},{C50C3.9a},{C50C3.1} 2372 CB6878_redo III 8242351 1 A T 255 1.00 63 62 0 30 30 @TTtTtTtttTttTTtTTtTTTttTTTTttt point 0 nongenic,nongenic,nongenic,nongenic -3008 upstream,572 into,686 downstream,790 downstream {C02F5.8},{C02F5.12},{C02F5.9.1},{C02F5.9.2} 2374 CB6878_redo III 8336683 1 G C 15 2.00 0 14 0 7 7 @CCCCCCC point 0 nongenic,nongenic -2531 upstream,738 downstream {ZC262.4},{ZC262.9} 2375 CB6878_redo III 8336685 1 G C 15 2.00 0 2 0 6 6 @CCCCCC point 0 nongenic,nongenic -2533 upstream,736 downstream {ZC262.4},{ZC262.9} 2376 CB6878_redo III 8336688 1 G C 3 2.00 0 0 1 4 5 @CCC,C point 0 nongenic,nongenic -2536 upstream,733 downstream {ZC262.4},{ZC262.9} 2377 CB6878_redo III 8336689 1 T C 12 2.00 0 0 0 4 4 @CCCC point 0 nongenic,nongenic -2537 upstream,732 downstream {ZC262.4},{ZC262.9} 2378 CB6878_redo III 8336690 1 A C 12 2.00 0 0 0 4 4 @CCCC point 0 nongenic,nongenic -2538 upstream,731 downstream {ZC262.4},{ZC262.9} 2385 CB6878_redo III 8344885 1 A G 3 9.69 0 0 3 9 12 @...CGCgggggg point 0 nongenic,nongenic -630 upstream,731 downstream {ZC262.7},{ZC262.10} 2387 CB6878_redo III 8344890 1 C G 3 2.00 0 0 6 9 15 @G..gggg,g,,gg,g point 0 nongenic,nongenic -635 upstream,726 downstream {ZC262.7},{ZC262.10} 2388 CB6878_redo III 8423181 1 C A 22 1.00 63 8 1 4 5 @AAaa, point 0 nongenic,nongenic,nongenic -3073 upstream,612 downstream,838 downstream {ZK1236.2},{ZK1236.3a},{ZK1236.3b} 2390 CB6878_redo III 8424571 1 T C 247 8.25 63 62 0 22 22 @CCCCCCCCCCCCCcCCCCcCcC point 0 nongenic -1683 upstream {ZK1236.2} 2394 CB6878_redo III 8433814 1 A C 14 1.00 63 0 0 4 4 @CCCc point 0 nongenic -504 upstream {ZK1236.9} 2395 CB6878_redo III 8433815 1 G C 3 1.00 63 6 0 4 4 @ACCc point 0 nongenic -505 upstream {ZK1236.9} 2397 CB6878_redo III 8438266 1 T G 14 1.50 63 0 0 4 4 @Gggg point 0 three_prime_UTR none {ZK1236.6.1} 162420 CB6878_redo III 8442122 192 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered,uncovered non-exonic, 1207 to 1399 bp into,non-exonic, 1210 to 1402 bp into,non-exonic, 1212 to 1404 bp into {ZK1236.7.2},{ZK1236.7.3},{ZK1236.7.1} 2412 CB6878_redo III 8461758 1 A G 16 1.00 63 34 1 3 4 @,ggg point 0 nongenic -8834 upstream {F42H10.5} 2413 CB6878_redo III 8461978 1 C A 255 1.00 63 62 0 18 18 @aAaaaaaaAAAaAAaaaa point 0 SNP none {haw44763} 2415 CB6878_redo III 8503007 1 A T 255 1.00 63 62 0 15 15 @TTTTttttTTTttTt point 0 SNP none {haw44793} 2416 CB6878_redo III 8511280 1 G C 30 1.00 63 62 3 4 7 @,..ccCC point 0 nongenic,nongenic 7036 into,7513 into {C04D8.1b},{C04D8.1a} 2417 CB6878_redo III 8563931 1 G A 227 1.00 63 62 0 10 10 @AAAAAaaaAa point 0 SNP none {haw44859} 2419 CB6878_redo III 8575624 1 C T 122 1.00 63 34 0 4 4 @tTTt point 0 nongenic -5385 upstream {C06E1.3} 2420 CB6878_redo III 8583354 1 C T 154 1.00 63 62 0 6 6 @TTtttT point 0 three_prime_UTR none {C06E1.3} 2427 CB6878_redo III 8684179 1 T A 255 1.00 63 62 0 21 21 @AAAaAaaAAAaaaAaaaaAaa point 0 SNP none {haw44984} 2428 CB6878_redo III 8684208 1 C T 255 1.00 63 62 0 27 27 @ttttTtttTTtTttttTTtttttTttt point 0 SNP none {haw44985} 2432 CB6878_redo III 8693607 1 G C 255 1.00 63 62 0 12 12 @CccCCcCcCcCc point 0 missense TGT->TCT[Cys->Ser] {B0303.7a} 2433 CB6878_redo III 8693611 1 G A 255 1.00 63 62 0 14 14 @AaaAAaAaAaAaaa point 0 silent GGG->GGA[Gly->Gly] {B0303.7a} 2434 CB6878_redo III 8693686 1 A G 76 1.00 63 60 0 4 4 @ggGG point 0 nongenic,nongenic,nongenic,nongenic -3192 upstream,143 into,305 downstream,835 downstream {B0303.7b},{B0303.7a},{B0303.4.1},{B0303.4.2} 2435 CB6878_redo III 8693687 1 G T 78 1.00 63 0 0 4 4 @ttTT point 0 nongenic,nongenic,nongenic,nongenic -3191 upstream,144 into,306 downstream,836 downstream {B0303.7b},{B0303.7a},{B0303.4.1},{B0303.4.2} 162422 CB6878_redo III 8693691 49 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 147 to 196 bp into {B0303.7a} 2436 CB6878_redo III 8693743 1 G T 104 1.00 63 34 0 5 5 @TTTtt point 0 nongenic,nongenic,nongenic,nongenic -3135 upstream,200 into,362 downstream,892 downstream {B0303.7b},{B0303.7a},{B0303.4.1},{B0303.4.2} 2437 CB6878_redo III 8693773 1 A T 255 1.00 63 62 0 19 19 @TTTttTTTtTTTTtTTTtT point 0 SNP none {haw44992} 2438 CB6878_redo III 8701737 1 C T 197 1.00 63 62 0 12 12 @TtTtttttTttt point 0 silent,SNP TCC->TCT[Ser->Ser],none {B0303.9},{haw44997} 2439 CB6878_redo III 8704000 1 T A 255 1.00 63 62 0 24 24 @AAAaaaaAAaaaAaaaaAAaaaAa point 0 SNP none {haw44999} 2440 CB6878_redo III 8705717 1 C T 50 1.00 63 12 2 4 6 @ttTt.. point 0 nongenic,nongenic 2505 into,537 into {B0303.11},{B0303.16} 2442 CB6878_redo III 8710964 1 T A 255 1.00 63 62 0 13 13 @aaaaAaAAAaAaa point 0 SNP none {haw45004} 2443 CB6878_redo III 8711826 1 C T 255 1.00 63 62 0 17 17 @tTTTTTTTTtTtTTtTt point 0 SNP none {haw45005} 2444 CB6878_redo III 8711855 1 C A 22 1.00 63 62 2 3 5 @,.AAa point 0 nongenic -1836 upstream {B0303.11} 2445 CB6878_redo III 8712013 1 G A 209 1.00 63 62 0 12 12 @aAAaAAAAAaaa point 0 SNP none {haw45006} 2446 CB6878_redo III 8713033 1 C T 87 1.00 63 62 1 4 5 @,TTTt point 0 nongenic,nongenic -3014 upstream,861 downstream {B0303.11},{B0303.14} 2447 CB6878_redo III 8733582 1 A T 255 1.00 63 62 0 25 25 @tTtttTTTTttTTTttTTTTTttTt point 0 SNP none {haw45014,uCE3-1086} 2448 CB6878_redo III 8733611 1 A T 255 1.00 63 62 0 27 27 @ttTTTTTttTttttTtttTtttTtTtt point 0 SNP none {haw45015,uCE3-1087} 2450 CB6878_redo III 8740761 1 C T 255 1.00 63 62 0 25 25 @TTtTttTTTTtTTTTtTTTTTTttT point 0 SNP none {haw45017} 2451 CB6878_redo III 8741583 1 G C 83 1.00 63 50 2 8 10 @ccCCCCCC.. point 0 nongenic,nongenic,nongenic -262 upstream,-264 upstream,330 downstream {ZK370.5.1},{ZK370.5.2},{ZK370.6} 2452 CB6878_redo III 8741584 1 C G 75 1.00 63 50 2 7 9 @gGGGGGG.. point 0 nongenic,nongenic,nongenic -263 upstream,-265 upstream,329 downstream {ZK370.5.1},{ZK370.5.2},{ZK370.6} 2453 CB6878_redo III 8742380 1 G A 255 1.00 63 62 0 25 25 @AAAAaAaAAAaaaAaAAAaAaAaaa point 0 SNP,three_prime_UTR none,none {haw45020},{ZK370.6} 2454 CB6878_redo III 8744441 1 C T 255 1.00 63 62 0 24 24 @tTtttTTTtTttttTTttttttTt point 0 SNP none {haw45021} 2455 CB6878_redo III 8752722 1 C T 255 1.00 63 62 0 14 14 @tTtttttTtttTtT point 0 SNP none {haw45024} 2458 CB6878_redo III 8758065 1 T C 255 1.00 63 62 0 21 21 @ccccccCccCCCcCcCcccCc point 0 SNP none {haw45027} 2459 CB6878_redo III 8810239 1 T C 30 1.00 63 62 4 5 9 @....ccccC point 0 nongenic,nongenic -1003 upstream,-8568 upstream {F54F2.8.1},{F54F2.1} 2466 CB6878_redo III 8835513 1 A G 241 1.00 63 62 0 11 11 @GGGgGgGgGGG point 0 nongenic,nongenic -4497 upstream,2818 into {F44E2.10},{F44E2.4} 6116 CB6878_redo III 8905205 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,,gGg indel 1 nongenic,nongenic,nongenic -1165 upstream,-319 upstream,-330 upstream {ZK637.7b.1},{ZK637.8c,ZK637.8e},{ZK637.8a,ZK637.8b,ZK637.8d,ZK637.8f} 2473 CB6878_redo III 8905206 1 C A 21 1.00 63 8 0 6 6 @TTaAaA point 0 nongenic,nongenic,nongenic -1166 upstream,-317 upstream,-328 upstream {ZK637.7b.1},{ZK637.8c,ZK637.8e},{ZK637.8a,ZK637.8b,ZK637.8d,ZK637.8f} 2474 CB6878_redo III 8929471 1 A T 47 1.00 63 14 1 3 4 @TTT. point 0 nongenic,nongenic -2592 upstream,-3033 upstream {ZK643.1},{ZK643.7} 2475 CB6878_redo III 8976442 1 T G 38 1.00 63 42 1 4 5 @GGgG, point 0 silent ACA->ACC[Thr->Thr] {R08D7.6a,R08D7.6b,R08D7.6c} 2476 CB6878_redo III 8976443 1 G T 42 1.00 63 38 1 4 5 @TTtT, point 0 missense ACA->AAA[Thr->Lys] {R08D7.6a,R08D7.6b,R08D7.6c} 2478 CB6878_redo III 9013698 1 T G 25 6.25 63 10 1 4 5 @,ggGg point 0 nongenic,nongenic,nongenic -1419 upstream,-3818 upstream,786 into {F59B2.9},{F59B2.12},{F59B2.11} 2480 CB6878_redo III 9025485 1 A T 255 1.00 63 62 0 25 25 @TTTTTttTTtttttTtTTtTTTTTT point 0 SNP none {haw45122} 2482 CB6878_redo III 9066055 1 C G 255 1.00 63 62 0 35 35 @GgGgGgGggGGGggggggGgGgggGgGgGGGggGg point 0 nongenic 5616 into {R107.8} 2483 CB6878_redo III 9066056 1 G C 255 1.00 63 62 0 36 36 @CcCcCcCccCCCccccccCcCcccCcCcCCCccCcc point 0 nongenic 5615 into {R107.8} 2484 CB6878_redo III 9101165 1 G T 76 0.00 29 62 0 9 9 @ttttttttt point 0 missense CAA->AAA[Gln->Lys] {ZK507.1} 2485 CB6878_redo III 9101166 1 C T 76 0.00 29 62 0 9 9 @ttttttttt point 0 non_start ATG->ATA[Met->Ile] {ZK507.1} 2491 CB6878_redo III 9111892 1 T A 35 1.00 63 28 1 3 4 @,aaa point 0 nongenic,nongenic -2709 upstream,-3099 upstream {ZK507.6},{ZK512.1} 6125 CB6878_redo III 9199644 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,.AAAA indel 0 nongenic,nongenic -460 upstream,209 downstream {ZC84.6},{ZC84.1} 2494 CB6878_redo III 9221012 1 G T 10 1.00 63 2 1 3 4 @TTT. point 0 nongenic -5663 upstream {ZC84.4} 2496 CB6878_redo III 9263153 1 G A 255 1.00 63 62 0 22 22 @AAaaaaaAAaAaaAAAAAAaAA point 0 SNP none {haw45230} 2497 CB6878_redo III 9264263 1 G A 255 1.00 63 62 0 26 26 @AAAaAAAAAAaAAaaAAAAaaaAaaA point 0 SNP none {haw45233} 2498 CB6878_redo III 9282275 1 A C 107 1.00 63 62 0 5 5 @CCCCc point 0 nongenic,nongenic -13306 upstream,-3679 upstream {M01A8.2a,M01A8.2b},{K01B6.1} 2499 CB6878_redo III 9282276 1 G A 98 1.00 63 0 0 4 4 @AAAa point 0 nongenic,nongenic -13307 upstream,-3678 upstream {M01A8.2a,M01A8.2b},{K01B6.1} 2501 CB6878_redo III 9298564 1 C T 255 1.00 63 62 0 27 27 @tTttTtttTtTTtTtTtTTTTTtTTtt point 0 SNP none {haw45256} 2502 CB6878_redo III 9337339 1 T A 255 1.00 63 62 0 21 21 @aaAaAaAAaaAAAaAAaaaAa point 0 nongenic,nongenic,nongenic -3161 upstream,274 into,550 into {C40H1.4},{K04H4.1a},{K04H4.1b} 2503 CB6878_redo III 9341369 1 T C 255 1.00 63 62 0 40 40 @CCCCCCcCcCcCCccCcCCCcCcCCCCCCCCCCCCccCcC point 0 missense,SNP AGA->GGA[Arg->Gly],none {K04H4.1a},{haw45266} 2504 CB6878_redo III 9350628 1 C T 255 1.00 63 62 0 15 15 @TTtTtttttttttTT point 0 missense,SNP GGA->GAA[Gly->Glu],none {K04H4.2c.1,K04H4.2c.2},{haw45273} 2505 CB6878_redo III 9350653 1 C T 255 1.00 63 62 0 15 15 @tTTTttTttTttttT point 0 missense,SNP GAG->AAG[Glu->Lys],none {K04H4.2c.1,K04H4.2c.2},{haw45274} 2506 CB6878_redo III 9350660 1 C T 255 1.00 63 62 0 15 15 @TTttTttTttttTTT point 0 silent,SNP AGG->AGA[Arg->Arg],none {K04H4.2c.1,K04H4.2c.2},{haw45275} 2507 CB6878_redo III 9350786 1 A C 105 1.00 63 62 2 7 9 @,.cCcccCc point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -6436 upstream,-9382 upstream,2699 into,3112 into,3131 into,3133 into,3171 into {K04H4.1a,K04H4.1b},{K04H4.5},{K04H4.2a.3,K04H4.2b},{K04H4.2c.2},{K04H4.2a.1},{K04H4.2c.1},{K04H4.2a.2} 2508 CB6878_redo III 9352561 1 C T 255 1.00 63 62 0 42 42 @TTtTtttTTTTTttttTTtttTtTTTTttTTTtttTtTtTtt point 0 silent,SNP GAG->GAA[Glu->Glu],none {K04H4.2c.1,K04H4.2c.2},{haw45277} 2509 CB6878_redo III 9355598 1 A C 255 1.00 63 62 0 32 32 @CcCcCcccccccccCccCCCCCccccCCCCCC point 0 nongenic,nongenic,nongenic -216 upstream,-234 upstream,-4570 upstream {K04H4.2a.1,K04H4.2a.2},{K04H4.2a.3,K04H4.2b,K04H4.2c.1,K04H4.2c.2},{K04H4.5} 2510 CB6878_redo III 9355599 1 C G 255 1.00 63 62 0 32 32 @GgGgggggggggGggGGGGGggggGGGGGGGG point 0 nongenic,nongenic,nongenic -217 upstream,-235 upstream,-4569 upstream {K04H4.2a.1,K04H4.2a.2},{K04H4.2a.3,K04H4.2b,K04H4.2c.1,K04H4.2c.2},{K04H4.5} 2512 CB6878_redo III 9409056 1 T G 130 1.94 63 62 0 22 22 @GgGGgGGggGGGGGggGgggGg point 0 nongenic -2513 upstream {T26G10.1} 2513 CB6878_redo III 9409292 1 C G 255 1.19 63 62 0 22 22 @gggGggGGGggGgGggGGggGg point 0 nongenic -2749 upstream {T26G10.1} 2516 CB6878_redo III 9447126 1 A T 15 1.00 63 62 3 4 7 @tttt,.. point 0 nongenic,nongenic -3598 upstream,1122 into {F54C8.4},{F54C8.6} 2517 CB6878_redo III 9448445 1 C G 255 1.00 63 62 0 28 28 @GgGGgggGGGGGGGGgGgGGGgGGGggG point 0 SNP none {haw45304} 2518 CB6878_redo III 9449797 1 C T 255 1.00 63 62 0 25 25 @TtTTttTttttTtTtttttTTtttt point 0 SNP none {haw45305} 2519 CB6878_redo III 9450593 1 C A 255 1.00 63 62 0 28 28 @aaaAAAaAAAaaAAAAaaaAAaaaAaAa point 0 SNP none {haw45306} 2520 CB6878_redo III 9451505 1 G C 255 1.00 63 62 0 13 13 @CCCcCcccCCCCC point 0 SNP,three_prime_UTR none,none {haw45307},{F54C8.7a} 2521 CB6878_redo III 9452439 1 G T 255 1.00 63 62 0 15 15 @TTTttTtTTTTTTTt point 0 SNP none {haw45308,snp_F54C8[1]} 2523 CB6878_redo III 9479166 1 G A 255 1.00 63 62 0 29 29 @aaAaaAaAaaAAAAAaaaAAaAAaAAAaa point 0 SNP none {haw45312} 2524 CB6878_redo III 9551073 1 T A 255 1.00 63 62 0 26 26 @AaaAAAaAAAaaAAAAAAAaaAaAAA point 0 nongenic,nongenic,nongenic,nongenic -1494 upstream,4604 into,4814 into,4915 into {ZK1098.10c.1},{ZK1098.10a},{ZK1098.10b,ZK1098.10c.2,ZK1098.10d},{ZK1098.10e} 162423 CB6878_redo III 9571108 154 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered non-exonic, 7759 to 7913 bp into,non-exonic, 8512 to 8666 bp into {C48B4.4a,C48B4.4b,C48B4.4c},{C48B4.4d} 2527 CB6878_redo III 9571279 1 G C 58 1.00 63 52 0 4 4 @CCCC point 0 nongenic,nongenic 692 into,986 into {C48B4.4a,C48B4.4c,C48B4.4d},{C48B4.4b} 6136 CB6878_redo III 9583692 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @....tt indel 1 nongenic -1430 upstream {C48B4.3} 2528 CB6878_redo III 9583693 1 C A 4 1.00 63 18 0 4 4 @aagg point 0 nongenic -1431 upstream {C48B4.3} 2529 CB6878_redo III 9583725 1 A T 173 1.00 63 62 0 9 9 @ttttTtttt point 0 SNP none {haw45342} 2530 CB6878_redo III 9584271 1 T A 112 1.00 63 62 0 5 5 @aANaa point 0 nongenic -2009 upstream {C48B4.3} 2532 CB6878_redo III 9590111 1 T C 67 1.00 63 62 1 3 4 @,cCc point 0 nongenic,nongenic,nongenic -7849 upstream,1983 into,1985 into {C48B4.3},{C48B4.1.2},{C48B4.1.1} 6138 CB6878_redo III 9637544 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @,,,,.Aa indel 1 nongenic -526 upstream {F58A4.11} 2534 CB6878_redo III 9637545 1 A G 97 1.00 63 62 0 6 6 @GGGgCc point 0 nongenic -527 upstream {F58A4.11} 2535 CB6878_redo III 9639395 1 T G 21 1.00 63 16 2 3 5 @.,GgG point 0 nongenic -2377 upstream {F58A4.11} 2536 CB6878_redo III 9642173 1 T G 45 1.00 63 62 1 3 4 @,Ggg point 0 nongenic -5155 upstream {F58A4.11} 2538 CB6878_redo III 9643534 1 C G 255 1.00 63 62 1 26 27 @GgGGGGgGGGgGg.gGGgGgGGGgggG point 0 SNP none {uCE3-1110} 2539 CB6878_redo III 9643535 1 G C 255 1.00 63 62 0 27 27 @CcCCCCcCCCcCcccCCcCcCCCcccC point 0 SNP none {uCE3-1111} 2544 CB6878_redo III 9754430 1 C A 255 1.00 63 62 0 24 24 @aAAAaaAAAaAtAAAAAaaAaAaA point 0 missense,SNP GAG->GAT[Glu->Asp],none {T05G5.8.1,T05G5.8.2},{haw45405} 2548 CB6878_redo III 9793256 1 A C 12 1.00 63 22 1 3 4 @CCC. point 0 nongenic,nongenic,nongenic -1009 upstream,-3715 upstream,202 into {ZK632.1a},{R10E11.5},{R10E11.9} 2549 CB6878_redo III 9796154 1 T C 255 1.00 63 62 0 49 49 @ccCCcCcCcCCCCCCCccCCcccCccCccCcCCccCcCcCCgCCccccC point 0 SNP none {haw45434} 2552 CB6878_redo III 9849156 1 G C 8 2.75 63 4 1 3 4 @,CcC point 0 nongenic,nongenic -1147 upstream,-2595 upstream {K11H3.6},{K11H3.3} 2555 CB6878_redo III 9907568 1 G A 6 1.00 63 56 2 3 5 @.,aAA point 0 nongenic,nongenic -6588 upstream,2987 into {F40F12.7.1,F40F12.7.2},{F40F12.5} 2556 CB6878_redo III 9907570 1 A G 73 1.00 63 6 1 6 7 @,gGGggg point 0 nongenic,nongenic -6586 upstream,2985 into {F40F12.7.1,F40F12.7.2},{F40F12.5} 2557 CB6878_redo III 9913766 1 C A 255 1.06 63 62 0 25 25 @AAAaaAaAaAaaaaAaaaAAAAaaA point 0 nongenic,nongenic,nongenic -3211 upstream,-390 upstream,-670 upstream {F40F12.5},{F40F12.7.1,F40F12.7.2},{F40F12.7.3} 2558 CB6878_redo III 9918742 1 C G 255 1.00 63 62 0 24 24 @GGGGGGGgGGGgGGGGgGGggggG point 0 silent GGG->GGC[Gly->Gly] {F40F12.3} 2559 CB6878_redo III 9920715 1 G T 255 1.00 63 62 0 21 21 @tTttTTtttTttttttTtTTt point 0 SNP none {haw45505} 2560 CB6878_redo III 9920824 1 C T 29 1.00 63 62 1 3 4 @.gTT point 0 SNP none {haw45506} 2561 CB6878_redo III 9920856 1 G T 255 1.00 63 62 0 12 12 @tTTTTtttTtTt point 0 SNP none {haw45507} 2562 CB6878_redo III 9922533 1 G C 10 1.00 63 62 2 3 5 @cCC.. point 0 nongenic,nongenic -2568 upstream,-537 upstream {F40F12.3},{K03H1.10.1,K03H1.10.2} 2563 CB6878_redo III 9938706 1 T C 118 3.94 63 48 15 36 51 @cccCc.C.c.cc.CccccccccCCcc.CccC.cccCCcCcc.,..,.C.,, point 0 nongenic 902 into {K03H1.5} 2566 CB6878_redo III 9942889 1 T A 255 1.00 63 62 0 25 25 @AaaAAAAaAAAAAAAaAAAAAAaaa point 0 SNP none {haw45518} 2567 CB6878_redo III 9956571 1 A C 250 1.00 63 62 0 18 18 @CCCcCccccCCcCcCccc point 0 nongenic,nongenic,nongenic -458 upstream,-682 upstream,-683 upstream {K03H1.2.1,K03H1.2.2},{R10E12.1a},{R10E12.1b,R10E12.1c,R10E12.1d} 2571 CB6878_redo III 9971896 1 T C 125 1.00 63 62 0 4 4 @CccC point 0 nongenic 1866 into {R10E12.2} 2572 CB6878_redo III 9971899 1 G T 114 1.00 63 62 0 5 5 @CTtTt point 0 nongenic 1863 into {R10E12.2} 2574 CB6878_redo III 10016572 1 A G 255 1.00 63 62 0 24 24 @GGGGGggGGGGGgGgGggGgGgGg point 0 SNP none {haw45557} 2576 CB6878_redo III 10019932 1 G T 255 1.00 63 62 0 25 25 @TTtTtTtTtTTTtTTTTTtTTttTT point 0 SNP none {haw45564} 2579 CB6878_redo III 10031246 1 G T 72 1.00 63 8 1 5 6 @.TTTTt point 0 SNP none {uCE3-1131} 2580 CB6878_redo III 10034770 1 A T 19 1.00 63 48 2 3 5 @,.ttT point 0 nongenic,nongenic,nongenic -1127 upstream,-1560 upstream,227 into {M04D8.6},{M04D8.5},{M04D8.8} 2581 CB6878_redo III 10035095 1 G T 255 1.00 63 62 0 12 12 @TtttTttTtTTt point 0 SNP none {haw45579} 2584 CB6878_redo III 10035139 1 C T 116 1.00 63 62 0 4 4 @tTtT point 0 nongenic,nongenic -758 upstream,142 downstream {M04D8.6},{M04D8.8} 2585 CB6878_redo III 10035170 1 C T 255 2.00 63 62 0 12 12 @TtTttTttTTtt point 0 nongenic,nongenic -727 upstream,173 downstream {M04D8.6},{M04D8.8} 2586 CB6878_redo III 10035184 1 A T 255 3.12 63 62 0 15 15 @TttTttTTttTtttt point 0 nongenic,nongenic -713 upstream,187 downstream {M04D8.6},{M04D8.8} 2587 CB6878_redo III 10035309 1 G T 255 1.00 63 62 0 13 13 @TtttTTTTtTttT point 0 SNP none {haw45580} 2588 CB6878_redo III 10035384 1 G A 255 1.00 63 62 0 16 16 @aaaAaAAAAaAAaAaA point 0 SNP none {haw45581} 2589 CB6878_redo III 10035425 1 C A 255 1.38 63 62 0 23 23 @AAaAaAaAAAAaAaAaaaAAaaA point 0 nongenic,nongenic -472 upstream,428 downstream {M04D8.6},{M04D8.8} 2590 CB6878_redo III 10036023 1 G A 255 1.00 63 62 0 34 34 @AAAAaaaAAaaaAaAaaAaaAaAAAaAAaaAAaa point 0 SNP none {haw45582} 2592 CB6878_redo III 10054081 1 A C 3 5.50 0 2 3 4 7 @CCCC.,. point 0 nongenic -3657 upstream {T16G12.4} 6156 CB6878_redo III 10100856 0 X X -1000 -999.99 -1000 -1000 3 0 3 @... indel 2 nongenic,nongenic -2881 upstream,-622 downstream {T16H12.5b.1},{T16H12.6} 2606 CB6878_redo III 10100858 1 C G 43 1.00 63 10 0 4 4 @gggG point 0 nongenic,nongenic -2883 upstream,620 into {T16H12.5b.1},{T16H12.6} 2614 CB6878_redo III 10148031 1 C G 255 1.25 63 62 0 18 18 @GGGgGGggGgggggGggg point 0 nongenic -4657 upstream {K08E5.2a,K08E5.2b.2,K08E5.2b.3} 6157 CB6878_redo III 10213728 1 X X -1000 -999.99 -1000 -1000 6 -4 2 @,,,.,, indel -1 SNP none {uCE3-1145} 2625 CB6878_redo III 10277507 1 C T 255 1.00 63 62 0 31 31 @TtTttttTtTtTtttTTtTttTTtTttTtTT point 0 nongenic,nongenic,nongenic -10231 upstream,-1515 upstream,967 into {R01H10.7},{K10G9.3},{R01H10.8} 2626 CB6878_redo III 10287323 1 C T 255 1.00 63 62 0 21 21 @TTtttttttttTTtTTTtTtt point 0 SNP none {haw45760} 2630 CB6878_redo III 10289344 1 G C 255 1.00 63 62 0 18 18 @CCCccCCccCCcccCccc point 0 SNP none {haw45764} 2631 CB6878_redo III 10291745 1 C A 147 1.00 63 62 3 7 10 @AaAaAAa... point 0 nongenic -3282 upstream {K10G9.1} 2632 CB6878_redo III 10291756 1 T A 155 1.00 63 62 0 6 6 @aaaaAa point 0 nongenic -3271 upstream {K10G9.1} 2634 CB6878_redo III 10294794 1 T A 32 1.00 63 34 1 3 4 @,AaA point 0 nongenic -233 upstream {K10G9.1} 2635 CB6878_redo III 10294795 1 A G 40 1.00 63 32 1 3 4 @,GgG point 0 nongenic -232 upstream {K10G9.1} 2636 CB6878_redo III 10311889 1 G A 255 1.00 63 62 0 20 20 @AaaAaAaAaaAaAAAaaaAa point 0 nongenic -439 upstream {T07A5.7} 6159 CB6878_redo III 10320208 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @...aa indel 0 nongenic,nongenic,nongenic -742 upstream,292 downstream,317 downstream {T07C4.10},{T07A5.6b},{T07A5.6c} 2638 CB6878_redo III 10354930 1 A T 255 1.00 63 62 0 27 27 @TttTtTtTtTttTTtTtTtTTTtTTtT point 0 SNP,three_prime_UTR none,none {haw45800},{T07C4.3b} 2642 CB6878_redo III 10361911 1 T G 255 1.00 63 62 0 20 20 @GgggggGGggGGGgGggGgg point 0 SNP none {haw45805} 2643 CB6878_redo III 10368133 1 G A 255 1.00 63 62 0 21 21 @AaaAAAAAAAAaaaaaaaAAA point 0 SNP none {haw45808} 2644 CB6878_redo III 10368773 1 C G 255 1.00 63 62 0 29 29 @GggGGgGGGGgggGgGGgGgGggGgggGg point 0 silent,SNP TCC->TCG[Ser->Ser],none {C38H2.1},{haw45810} 2660 CB6878_redo III 10378480 1 A G 71 1.00 63 62 4 7 11 @.,,,gGGgggg point 0 nongenic -3183 upstream {C38H2.2} 6162 CB6878_redo III 10382032 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @..,,cC indel 0 nongenic -368 downstream {C38H2.2} 6163 CB6878_redo III 10385216 0 X X -1000 -999.99 -1000 -1000 3 1 4 @,.,gg indel 0 nongenic,nongenic 15 downstream,302 downstream {C38H2.2},{C38H2.3} 2664 CB6878_redo III 10385217 1 C T 32 1.00 63 62 2 3 5 @TtT.. point 0 SNP none {haw45831} 2665 CB6878_redo III 10388877 1 A T 33 1.00 63 62 3 4 7 @tTTt... point 0 nongenic -2413 upstream {C38H2.3} 6164 CB6878_redo III 10397838 0 X X -1000 -999.99 -1000 -1000 3 0 3 @..,ggg indel 0 nongenic -1872 upstream {M03C11.1} 2666 CB6878_redo III 10399084 1 C A 255 1.00 63 62 0 26 26 @aaaAaaAaaaaAaaaaAaAAaAaaAA point 0 SNP none {haw45839} 2673 CB6878_redo III 10432571 1 A C 249 1.00 63 62 0 13 13 @ccCCCCCCCccCC point 0 nongenic,nongenic,nongenic -3925 upstream,-4697 upstream,3301 into {H04D03.1},{M03C11.7.1},{M03C11.8} 2674 CB6878_redo III 10441998 1 G C 255 1.00 63 62 0 19 19 @cCCcCCCcCCCCcccCccC point 0 missense CAC->CAG[His->Gln] {H04D03.2a,H04D03.2b} 2675 CB6878_redo III 10454269 1 G A 255 1.31 63 62 0 18 18 @AAaaaaaAaaaAaaaaAA point 0 SNP none {haw45927} 2676 CB6878_redo III 10460399 1 C T 10 1.00 63 14 2 3 5 @,,tTt point 0 nongenic,nongenic -1115 upstream,-62 upstream {D2045.1a,D2045.1b.2,D2045.1c},{D2045.2} 2677 CB6878_redo III 10460400 1 T G 27 1.00 63 10 1 6 7 @,GgGggg point 0 nongenic,nongenic -1114 upstream,-63 upstream {D2045.1a,D2045.1b.2,D2045.1c},{D2045.2} 2678 CB6878_redo III 10482439 1 G A 255 1.00 63 62 0 17 17 @aaaaAaaaaAaAAAAAa point 0 nongenic,nongenic,nongenic -5576 upstream,226 into,407 downstream {F43D9.1},{D2045.8},{D2045.7} 2679 CB6878_redo III 10498007 1 G A 255 1.00 63 62 0 16 16 @aaAAAaAaAAAAAaAA point 0 SNP none {haw45998} 2686 CB6878_redo III 10500602 1 G A 255 1.00 63 62 0 20 20 @aaAaAAAaaaaaAaAAAaaA point 0 silent,SNP TTC->TTT[Phe->Phe],none {F43D9.2},{haw46003} 2687 CB6878_redo III 10500798 1 C T 255 1.00 63 62 0 12 12 @tTTtttTtTttt point 0 SNP none {haw46004} 2688 CB6878_redo III 10500854 1 C T 181 1.00 63 62 0 8 8 @tTtttttT point 0 SNP none {haw46006} 2689 CB6878_redo III 10501170 1 C T 255 1.00 63 62 0 12 12 @tTtttTTTTtTt point 0 SNP none {haw46010} 2690 CB6878_redo III 10502428 1 G A 255 1.00 63 62 0 16 16 @aAaaaaaAAaAAaAaA point 0 SNP none {haw46016} 2691 CB6878_redo III 10502726 1 C T 255 1.00 63 62 0 13 13 @tTTtTTTtTttTT point 0 SNP none {haw46017} 2692 CB6878_redo III 10503428 1 G A 255 1.00 63 62 0 15 15 @AAAAAaaaAAAAAaA point 0 nongenic,nongenic 311 into,531 downstream {F43D9.2},{F43D9.5} 2693 CB6878_redo III 10512573 1 C T 255 1.00 63 62 0 20 20 @tTtTttttttttTtttTtTT point 0 SNP,three_prime_UTR none,none {haw46030},{F43D9.3a} 2694 CB6878_redo III 10512825 1 C T 255 1.00 63 62 0 21 21 @TtTtttttttTtTtTtttTtt point 0 SNP,three_prime_UTR none,none {haw46031},{F43D9.3a} 2695 CB6878_redo III 10513932 1 C T 255 1.00 63 62 0 15 15 @TTtTtTttTtttttt point 0 SNP none {haw46034} 2696 CB6878_redo III 10514115 1 G A 255 1.00 63 62 0 22 22 @AAAAaaAAaAAaAaaAaAAaaA point 0 SNP none {haw46035} 6165 CB6878_redo III 10514381 1 X X -1000 -999.99 -1000 -1000 5 -3 2 @..,,. indel -1 SNP none {uCE3-1167} 2697 CB6878_redo III 10515352 1 G C 255 6.50 63 62 0 17 17 @ccccccCccccCcCCCC point 0 nongenic,nongenic -5209 upstream,2512 into {T21C12.1b},{F43D9.3b} 2699 CB6878_redo III 10516781 1 G T 12 1.00 63 10 1 3 4 @,ttt point 0 nongenic,nongenic -3780 upstream,1083 into {T21C12.1b},{F43D9.3b} 6168 CB6878_redo III 10520155 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @,..,,.ttt indel 0 nongenic,nongenic -407 upstream,-533 upstream {T21C12.1b},{T21C12.1a} 2700 CB6878_redo III 10520156 1 G T 47 1.00 63 24 3 5 8 @ttTTt... point 0 nongenic,nongenic -405 upstream,-531 upstream {T21C12.1b},{T21C12.1a} 2701 CB6878_redo III 10520298 1 A C 255 1.00 63 62 0 33 33 @CCCcCccCCCccCcCCCcccCcCCCcCCCCCCC point 0 SNP none {haw46040} 2702 CB6878_redo III 10528187 1 G C 255 1.00 63 62 0 48 48 @cccCcCCcCccCCcCcccCCcccccCccccCcCCccCccCcccCcccc point 0 SNP none {haw46050} 2703 CB6878_redo III 10529998 1 C T 63 1.00 63 0 1 3 4 @Ttt, point 0 missense CCT->CTT[Pro->Leu] {T21C12.1a} 6172 CB6878_redo III 10546966 2 X X -1000 -999.99 -1000 -1000 6 -5 1 @,.,.., indel -2 SNP none {pas48914} 6173 CB6878_redo III 10551513 0 X X -1000 -999.99 -1000 -1000 1 1 2 @,CC indel 0 three_prime_UTR none {T21C12.4b} 2722 CB6878_redo III 10871241 1 A G 255 1.00 63 62 0 40 40 @ggggGggGGggGGggGgGGGGgGGggGgggGgGGgGGGGG point 0 missense AAG->GAG[Lys->Glu] {C44B9.1} 2723 CB6878_redo III 10871242 1 A G 255 1.00 63 62 0 40 40 @gggGggGGggGGggGgGGGGgGGggGgggGgGGgGGGGGg point 0 missense AAG->AGG[Lys->Arg] {C44B9.1} 2724 CB6878_redo III 10889685 1 T C 255 1.00 63 62 0 24 24 @ccCCCCcCCcCccCcCcCCCccCc point 0 nongenic,nongenic,nongenic -4887 upstream,-9705 upstream,3864 into {C44B9.6},{C44B9.3},{C44B9.4} 2725 CB6878_redo III 10954421 1 T A 255 1.00 63 62 0 15 15 @aAaaaaAAAAAAaaa point 0 nongenic -1031 upstream {Y48A6A.1} 2726 CB6878_redo III 10954422 1 G A 255 1.00 63 62 0 14 14 @AaaaaAAAAAAaaa point 0 nongenic -1032 upstream {Y48A6A.1} 2727 CB6878_redo III 11016885 1 T C 255 1.00 63 62 0 18 18 @CcCCCCCCccCCccCccC point 0 SNP none {haw46705} 2734 CB6878_redo III 11131374 1 C T 140 1.00 63 62 0 6 6 @TTTTTT point 0 nongenic -308 upstream {Y48A6C.5a,Y48A6C.5b} 2736 CB6878_redo III 11319277 1 T A 255 1.00 63 62 0 21 21 @AaAAaAAAAAAAaaAAaAAaa point 0 nongenic,nongenic -2337 upstream,1824 into {Y47D3A.27},{Y47D3A.28} 2737 CB6878_redo III 11340404 1 C T 255 1.00 63 62 0 24 24 @tTTTttttttTTtTttTttttTtt point 0 silent AGC->AGT[Ser->Ser] {T28D6.5a.1,T28D6.5a.2,T28D6.5b} 162424 CB6878_redo III 11399906 78 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2233 to 2311 bp into {Y47D3B.3} 162425 CB6878_redo III 11400043 54 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2370 to 2424 bp into {Y47D3B.3} 2741 CB6878_redo III 11472333 1 T A 174 1.00 63 62 0 10 10 @aaaaaaaaaa point 0 nongenic -1644 upstream {Y47D3B.9} 2742 CB6878_redo III 11480573 1 G A 255 1.00 63 62 0 13 13 @aAAAAAAAaAaAA point 0 SNP none {haw47230} 2743 CB6878_redo III 11486301 1 G C 210 1.00 63 62 0 9 9 @ccCccCccc point 0 SNP none {haw47238} 2745 CB6878_redo III 11504646 1 C A 255 1.00 63 62 0 11 11 @AaaAaAaAaaA point 0 SNP none {haw47276} 2746 CB6878_redo III 11516787 1 C T 255 1.00 63 62 0 18 18 @tTtTTtTTTttTTTTTTT point 0 SNP none {haw47292} 2750 CB6878_redo III 11529305 1 G A 132 1.00 63 62 0 5 5 @aaaaA point 0 nongenic,nongenic -5251 upstream,3051 into {Y66D12A.14},{Y66D12A.15} 2751 CB6878_redo III 11529315 1 T A 119 1.00 63 44 0 4 4 @aaaA point 0 nongenic,nongenic -5241 upstream,3061 into {Y66D12A.14},{Y66D12A.15} 2756 CB6878_redo III 11538533 1 C T 255 1.00 63 62 0 26 26 @TtTTtttTTttTttttTTTttttTtt point 0 premature_stop CAG->TAG[Gln->stop] {Y66D12A.14} 2757 CB6878_redo III 11543276 1 G A 255 1.00 63 62 0 44 44 @AAaAAaaaaaAaaaaaAaAaaAAaaAaaAAaAaaaAaaAaAaaa point 0 missense,SNP GGA->GAA[Gly->Glu],none {Y66D12A.14},{haw47330,uCE3-1248} 2761 CB6878_redo III 11576713 1 C G 255 1.00 63 62 0 30 30 @gGGgggGgggggggggggggggggGggGGg point 0 missense,SNP GCA->GGA[Ala->Gly],none {Y66D12A.8},{haw47425} 2762 CB6878_redo III 11580016 1 C A 164 7.69 63 62 0 6 6 @aaaaAA point 0 SNP none {haw47436} 2763 CB6878_redo III 11682308 1 G T 255 4.94 63 62 0 15 15 @tTtTTTtTTTTTtTT point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -14263 upstream,11353 into,6764 into,6857 into,6864 into,7764 into {Y41C4A.6},{Y41C4A.4c},{Y41C4A.4b},{Y41C4A.4a},{Y41C4A.4d},{Y41C4A.4e} 2766 CB6878_redo III 11694298 1 C A 122 1.00 63 62 0 7 7 @AAaAAga point 0 nongenic,nongenic,nongenic -2273 upstream,577 downstream,580 downstream {Y41C4A.6},{Y41C4A.4a},{Y41C4A.4e} 2767 CB6878_redo III 11768554 1 A C 42 1.00 63 2 0 4 4 @cccc point 0 nongenic,nongenic -6444 upstream,4991 into {C24H11.6},{C24H11.7} 2768 CB6878_redo III 11768555 1 T A 42 1.00 63 0 0 4 4 @aaaa point 0 nongenic,nongenic -6443 upstream,4990 into {C24H11.6},{C24H11.7} 162426 CB6878_redo III 11768559 440 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 4546 to 4986 bp into {C24H11.7} 2773 CB6878_redo III 11769074 1 C T 91 1.31 63 62 0 6 6 @TTTTTT point 0 nongenic,nongenic -5924 upstream,4471 into {C24H11.6},{C24H11.7} 2777 CB6878_redo III 11809758 1 T C 230 1.00 63 62 0 11 11 @cccccCCcCcc point 0 nongenic,nongenic -121 upstream,313 downstream {C18D11.6},{C18D11.9} 2779 CB6878_redo III 11861725 1 A T 255 1.00 63 62 0 18 18 @TTttTttttttttTtTtt point 0 nongenic,nongenic 408 into,564 downstream {Y56A3A.2},{Y56A3A.4} 2780 CB6878_redo III 11863637 1 A T 23 1.00 63 18 1 4 5 @TTTT. point 0 nongenic,nongenic -1504 upstream,1348 into {Y56A3A.2},{Y56A3A.4} 2789 CB6878_redo III 11990793 1 A T 20 1.00 63 62 2 4 6 @TTtt,, point 0 nongenic,nongenic 744 into,750 into {Y56A3A.32.2},{Y56A3A.32.1} 2795 CB6878_redo III 12008909 1 C G 255 6.50 63 62 0 15 15 @GGgGGggGGGggggg point 0 nongenic,nongenic -11521 upstream,-6075 upstream {Y79H2A.1a.1},{Y56A3A.33} 2797 CB6878_redo III 12060765 1 T A 169 1.00 63 62 0 6 6 @aaAAaA point 0 SNP none {haw48229} 162427 CB6878_redo III 12064459 52 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2837 to 2889 bp into {Y79H2A.11} 2806 CB6878_redo III 12239827 1 G A 95 5.19 63 62 0 10 10 @aaaaAaaAAa point 0 nongenic,nongenic,nongenic 421 downstream,457 downstream,728 downstream {Y75B8A.22.1},{Y75B8A.22.2},{Y75B8A.21} 2808 CB6878_redo III 12239848 1 A C 27 2.88 63 2 2 5 7 @,T.cccc point 0 nongenic,nongenic,nongenic 400 downstream,436 downstream,749 downstream {Y75B8A.22.1},{Y75B8A.22.2},{Y75B8A.21} 2809 CB6878_redo III 12254670 1 C T 136 6.69 63 62 1 9 10 @ttttttTt,T point 0 nongenic,nongenic -19251 upstream,3297 into {Y75B8A.25},{Y75B8A.24} 2810 CB6878_redo III 12254671 1 T A 132 6.69 63 62 1 9 10 @aaaaaaAa,A point 0 nongenic,nongenic -19250 upstream,3298 into {Y75B8A.25},{Y75B8A.24} 162428 CB6878_redo III 12347558 97 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3566 to 3663 bp into {Y75B8A.30} 2826 CB6878_redo III 12469224 1 T C 7 1.00 63 22 2 6 8 @cc.cccc. point 0 nongenic,nongenic -3536 upstream,50 into {Y49E10.23a,Y49E10.23b},{Y49E10.29} 2827 CB6878_redo III 12469226 1 A C 22 1.00 63 6 1 8 9 @cc.cccccc point 0 nongenic,nongenic -3534 upstream,52 into {Y49E10.23a,Y49E10.23b},{Y49E10.29} 2828 CB6878_redo III 12469287 1 T G 30 2.12 63 0 0 8 8 @GGGGGGGG point 0 nongenic,nongenic -3473 upstream,113 into {Y49E10.23a,Y49E10.23b},{Y49E10.29} 2829 CB6878_redo III 12469289 1 A G 22 2.12 63 0 0 8 8 @GGGGGGGG point 0 nongenic,nongenic -3471 upstream,115 into {Y49E10.23a,Y49E10.23b},{Y49E10.29} 2838 CB6878_redo III 12511900 1 A G 176 2.38 63 62 0 10 10 @GGGGGGGGGG point 0 ncRNA none {Y111B2A.5b} 162429 CB6878_redo III 12562145 79 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered non-exonic, 13025 to 13104 bp into,non-exonic, 737 to 816 bp into {Y111B2A.9a},{Y111B2A.9b} 2839 CB6878_redo III 12573264 1 G C 255 3.31 63 62 0 15 15 @CccCccCCCCCcCcc point 0 SNP none {haw49035} 2840 CB6878_redo III 12583126 1 A G 255 1.00 63 62 0 12 12 @GGgGGggGGggg point 0 SNP none {haw49061} 2841 CB6878_redo III 12589042 1 T C 255 1.00 63 62 0 20 20 @ccCcccccccCcccccCCcc point 0 nongenic -13793 upstream {Y111B2A.9a} 2842 CB6878_redo III 12596781 1 T A 255 1.38 63 62 0 17 17 @AAAAAaaAAaAaaaAAa point 0 nongenic,nongenic,nongenic,nongenic -21532 upstream,755 into,843 into,880 into {Y111B2A.9a},{Y111B2A.10a,Y111B2A.10b.3},{Y111B2A.10b.2},{Y111B2A.10b.1} 2843 CB6878_redo III 12603549 1 G T 124 1.75 63 62 0 8 8 @tttttttt point 0 nongenic,nongenic,nongenic -5056 upstream,-5621 upstream,4364 into {Y111B2A.10b.1},{Y111B2A.12},{Y111B2A.11} 2844 CB6878_redo III 12608700 1 G C 8 1.00 63 44 0 5 5 @Acccc point 0 nongenic,nongenic -350 upstream,-470 upstream {Y111B2A.11},{Y111B2A.12} 2846 CB6878_redo III 12636079 1 T C 255 1.44 63 62 0 14 14 @ccCCcCCCcccCcC point 0 nongenic,nongenic 9623 into,9628 into {Y111B2A.14.2},{Y111B2A.14.1} 2854 CB6878_redo III 12683449 1 A C 255 1.00 63 62 0 19 19 @CCCccccccCCcccCCccc point 0 SNP none {haw49231} 2858 CB6878_redo III 12725512 1 A T 255 1.06 63 62 0 23 23 @TTtttttttTTtttTTtttTTtt point 0 nongenic,nongenic -20820 upstream,11065 into {Y111B2A.21},{Y111B2A.22} 2860 CB6878_redo III 12750309 1 C G 59 1.00 63 24 0 4 4 @ggGG point 0 nongenic,nongenic -681 upstream,501 into {ZC482.7},{ZC482.2} 2861 CB6878_redo III 12750311 1 G C 119 1.00 63 24 0 5 5 @ccCCC point 0 nongenic,nongenic -679 upstream,499 into {ZC482.7},{ZC482.2} 2862 CB6878_redo III 12953211 1 T G 255 1.00 63 62 0 23 23 @gGGgggggGgGGgGggggggggg point 0 missense,SNP AAT->ACT[Asn->Thr],none {Y39E4A.2a,Y39E4A.2b},{snp_Y39E4A[3]} 2877 CB6878_redo III 13032411 1 T C 123 9.62 63 62 0 15 15 @CcCcCCCCCCcCCcC point 0 nongenic,nongenic,nongenic -2864 upstream,-7570 upstream,1610 into {F14F7.4},{F54F12.2a},{F14F7.5} 2881 CB6878_redo III 13032474 1 T C 9 1.25 63 62 7 11 18 @C.CCc,ccc.,C,ccc,, point 0 nongenic,nongenic,nongenic -2927 upstream,-7507 upstream,1673 into {F14F7.4},{F54F12.2a},{F14F7.5} 2882 CB6878_redo III 13032541 1 G C 133 1.00 63 62 0 7 7 @CCcccCC point 0 nongenic,nongenic,nongenic -2994 upstream,-7440 upstream,1740 into {F14F7.4},{F54F12.2a},{F14F7.5} 2883 CB6878_redo III 13032550 1 T C 128 1.00 63 62 0 7 7 @CcccCCc point 0 nongenic,nongenic,nongenic -3003 upstream,-7431 upstream,1749 into {F14F7.4},{F54F12.2a},{F14F7.5} 2884 CB6878_redo III 13042518 1 G C 5 1.00 63 42 3 3 6 @c.c..c point 0 nongenic,nongenic -4918 upstream,2537 into {F54F12.2b},{F54F12.2a} 2891 CB6878_redo III 13155781 1 G A 255 1.00 63 62 0 22 22 @AAAAAaAAaAAaAAAAaAaAaa point 0 SNP none {haw49837} 2892 CB6878_redo III 13202983 1 G T 178 9.81 63 62 0 11 11 @TTTTTTTTTTT point 0 nongenic,nongenic,nongenic,nongenic -1880 upstream,1788 into,1790 into,1794 into {Y39E4B.11},{Y39E4B.12b},{Y39E4B.12a.1,Y39E4B.12a.2},{Y39E4B.12c} 2893 CB6878_redo III 13264546 1 C A 245 1.19 63 62 0 10 10 @AaAAAaaAaa point 0 nongenic,nongenic -1206 upstream,307 into {F56A8.5},{F56A8.4} 2894 CB6878_redo III 13264548 1 T A 242 1.19 63 62 0 10 10 @AaAAAaaAaa point 0 nongenic,nongenic -1204 upstream,305 into {F56A8.5},{F56A8.4} 2895 CB6878_redo III 13265024 1 A T 255 1.00 63 62 0 19 19 @TTTTtTTttTtTtTttttT point 0 nongenic,nongenic -728 upstream,171 downstream {F56A8.5},{F56A8.4} 2896 CB6878_redo III 13281779 1 A G 255 1.00 63 62 0 28 28 @GGgGGggGGggGGGGgGGGgGgGGggGG point 0 SNP none {haw49884} 2904 CB6878_redo III 13468706 1 A T 187 1.00 63 62 1 10 11 @,ttTTTtttTt point 0 nongenic,nongenic,nongenic,nongenic -2433 upstream,-2883 upstream,2247 into,2484 into {T27E9.3},{T27E9.5},{T27E9.4a.1,T27E9.4b},{T27E9.4a.2} 2907 CB6878_redo III 13536226 1 C A 58 1.00 63 34 0 4 4 @aaaA point 0 nongenic,nongenic -12250 upstream,3609 into {Y76A2B.1},{Y76A2B.2} 2950 CB6878_redo III 13750753 1 T C 255 2.19 63 62 0 24 24 @CCcCcccCccCCccccCccCCccc point 0 nongenic,nongenic -1597 upstream,-2184 upstream {K08E3.10},{K08E3.2} 2958 CB6878_redo IV 17659 1 A C 4 2.00 24 10 3 4 7 @GCCg,,, point 0 nongenic,nongenic -3833 upstream,2161 into {Y38C1AB.3},{Y38C1AB.6} 2962 CB6878_redo IV 149978 1 A G 255 1.00 63 62 0 43 43 @gGGgGGGgGggGGGGgGgGggGgggggGggGgGggGGgggggG point 0 SNP none {haw50079} 2977 CB6878_redo IV 281988 1 C G 3 1.00 63 0 0 5 5 @ggtgg point 0 nongenic -1658 upstream {T21D12.9b} 2983 CB6878_redo IV 495583 1 T G 255 1.00 63 62 0 20 20 @GGGGGGGGGgGgGGgGGgGg point 0 SNP none {haw50110} 2996 CB6878_redo IV 743294 1 A G 255 1.00 63 62 0 33 33 @gGGggGGgGgGgGGggGgGGGgGGGGGGGGGgG point 0 nongenic,nongenic -6572 upstream,1212 into {Y55F3C.3b},{Y55F3C.3a} 2997 CB6878_redo IV 757658 1 T A 255 1.00 63 62 0 33 33 @AaAaAaAaAaAaAaaaAaaaaAaAaAaaaaAAA point 0 missense TTC->TAC[Phe->Tyr] {Y55F3C.2} 2998 CB6878_redo IV 807998 1 T C 255 1.00 63 62 0 18 18 @CcCccccCcCccCcCccc point 0 SNP none {haw50174} 3006 CB6878_redo IV 976182 1 T C 255 1.00 63 62 0 15 15 @cCccCcCCCCccCCc point 0 SNP none {haw50433} 3007 CB6878_redo IV 976984 1 A G 255 1.00 63 62 0 26 26 @GggGgGggggGGGGgGGgGGgggGGG point 0 SNP none {haw50435} 3010 CB6878_redo IV 991371 1 G C 255 1.06 63 62 0 22 22 @CccccCccCcCccCccccCCCc point 0 nongenic,nongenic -917 upstream,-931 upstream {Y55F3AM.6a,Y55F3AM.6b},{Y55F3AM.7} 3023 CB6878_redo IV 1197597 1 G T 255 1.00 63 62 0 18 18 @TTTTTttTTTtTTTttTt point 0 SNP none {haw50776} 3030 CB6878_redo IV 1351822 1 C G 35 1.00 63 6 0 6 6 @GGGGaa point 0 nongenic 1135 into {F58F6.4} 3031 CB6878_redo IV 1351823 1 T C 10 1.00 63 6 1 5 6 @CCCG.a point 0 nongenic 1134 into {F58F6.4} 3032 CB6878_redo IV 1351824 1 A T 7 1.00 63 10 2 4 6 @TCTC.. point 0 nongenic 1133 into {F58F6.4} 3033 CB6878_redo IV 1386027 1 A G 255 1.00 63 62 0 18 18 @GgggGgggGgGGGgGggG point 0 nongenic,nongenic -134 upstream,-9464 upstream {Y104H12A.1},{F58F6.3} 3038 CB6878_redo IV 1410785 1 A G 12 1.00 63 0 0 4 4 @gggg point 0 three_prime_UTR none {Y77E11A.7b} 3041 CB6878_redo IV 1438459 1 A T 255 1.00 63 62 0 28 28 @TttTTTTTTttTtTTttTttttTttTTT point 0 missense TCC->ACC[Ser->Thr] {Y77E11A.11.1,Y77E11A.11.2} 3056 CB6878_redo IV 1695528 1 G C 255 1.00 63 62 0 22 22 @CCccCCCCCcccCCCcCCcccc point 0 nongenic,nongenic -13370 upstream,-4368 upstream {Y41D4B.24},{K08D12.5} 6190 CB6878_redo IV 1726632 5 X X -1000 -999.99 -1000 -1000 4 -2 2 @,.,.TTT indel -5 nongenic -2490 upstream {K08D12.7} 3058 CB6878_redo IV 1812233 1 A G 73 4.56 63 62 0 14 14 @GGGgGGGgGGgGGG point 0 nongenic,nongenic -8252 upstream,2865 into {Y38C1BA.1},{Y38C1BA.2a,Y38C1BA.2b} 3059 CB6878_redo IV 1837524 1 A T 9 1.00 63 16 3 3 6 @,,,TtT point 0 nongenic -1987 upstream {K07A9.4} 3060 CB6878_redo IV 1837526 1 T A 16 1.00 63 8 3 3 6 @,,,AaA point 0 nongenic -1985 upstream {K07A9.4} 3061 CB6878_redo IV 1845558 1 T C 3 1.00 63 0 1 4 5 @CCCC, point 0 nongenic,nongenic -2407 upstream,1627 into {F55A8.2a.1,F55A8.2a.2},{K07A9.4} 3062 CB6878_redo IV 1917013 1 A C 221 1.00 63 62 0 12 12 @CcCCCccCCCcc point 0 SNP none {haw51958} 162433 CB6878_redo IV 1932437 126 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 8867 to 8993 bp into {F52C12.4} 162434 CB6878_redo IV 1932988 88 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 9418 to 9506 bp into {F52C12.4} 162435 CB6878_redo IV 1951225 58 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3028 to 3086 bp into {F52C12.3} 162436 CB6878_redo IV 1951505 57 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3308 to 3365 bp into {F52C12.3} 3070 CB6878_redo IV 1971408 1 A G 34 1.00 63 62 3 4 7 @gggg,,, point 0 nongenic,nongenic -2296 upstream,640 into {Y76B12C.3},{Y76B12C.4} 162437 CB6878_redo IV 2005329 52 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 12239 to 12291 bp into {Y76B12C.2} 3083 CB6878_redo IV 2104457 1 T C 5 1.00 63 0 1 3 4 @ACC. point 0 nongenic,nongenic -4567 upstream,403 into {C23H5.11},{C23H5.7} 3084 CB6878_redo IV 2106939 1 A C 110 2.50 63 62 0 6 6 @CCCCCC point 0 nongenic,nongenic -7049 upstream,2885 into {C23H5.11},{C23H5.7} 3085 CB6878_redo IV 2130505 1 A T 255 1.00 63 62 0 15 15 @ttttTTTTTTTTtTT point 0 SNP none {haw52294} 3088 CB6878_redo IV 2202566 1 G C 255 1.00 63 62 0 27 27 @CCcCCCccccCCCCCccCCcccCcCcc point 0 missense GAG->CAG[Glu->Gln] {Y71G10AR.4} 3089 CB6878_redo IV 2226862 1 T C 210 1.62 63 62 0 10 10 @CCCCcCCccC point 0 nongenic,nongenic 4034 into,4036 into {T04C4.1a,T04C4.1b.2},{T04C4.1b.1} 3106 CB6878_redo IV 2357212 1 G T 145 1.00 63 62 0 6 6 @tttttT point 0 SNP none {haw52736} 3107 CB6878_redo IV 2359440 1 A G 252 1.00 63 62 0 13 13 @GgGGGGgGGgGGG point 0 SNP none {haw52752} 3113 CB6878_redo IV 2373373 1 T C 254 1.31 63 62 0 14 14 @CccccCccccCCCC point 0 nongenic,nongenic -5089 upstream,2742 into {Y38F2AR.13},{Y38F2AR.5} 3114 CB6878_redo IV 2502956 1 A G 198 2.38 63 62 0 19 19 @gGgGGGGGGgGggGGGGGG point 0 nongenic,nongenic -1368 upstream,905 downstream {Y69A2AR.16},{Y69A2AR.17} 3118 CB6878_redo IV 2614797 1 T A 14 1.00 63 62 2 3 5 @AAA,, point 0 nongenic,nongenic,nongenic -1736 upstream,-4132 upstream,601 into {Y69A2AR.28},{Y69A2AR.4},{Y69A2AR.5} 3123 CB6878_redo IV 2633667 1 A C 255 2.75 63 62 0 35 35 @cCccCCCccCCCCCccCcccccCCccccCCCcCcC point 0 nongenic -5439 upstream {Y69A2AR.29} 3149 CB6878_redo IV 2999123 1 A G 255 1.00 63 62 0 21 21 @GggggGGGGggGGgGGgGGgG point 0 silent CCT->CCC[Pro->Pro] {Y54G2A.27} 3151 CB6878_redo IV 3098667 1 A T 37 1.00 63 62 1 3 4 @,tTt point 0 nongenic -11747 upstream {Y67D8C.9a} 3155 CB6878_redo IV 3206809 1 G A 37 6.69 27 10 0 4 4 @AAaa point 0 nongenic,nongenic -6958 upstream,2256 into {M4.1},{M4.2} 3159 CB6878_redo IV 3209012 1 C A 106 3.56 63 62 23 33 56 @aAAa,AAA,.AA,,.,A,,A,aa,AAaa,,a,AaaaAAaaaa,a,,,A,,aAa,,, point 0 SNP none {haw54198} 3161 CB6878_redo IV 3342089 1 C G 9 1.00 63 44 1 5 6 @,ggggg point 0 nongenic,nongenic,nongenic -976 upstream,153 downstream,432 downstream {F42A6.8},{F42A6.2},{F42A6.9} 3176 CB6878_redo IV 3362174 1 A G 7 1.00 63 0 1 5 6 @GGGGG. point 0 nongenic -1374 upstream {Y55H10A.2} 3181 CB6878_redo IV 3466964 1 C T 83 1.00 63 62 8 14 22 @TTTtt.,,Tt,t..TTT.TTT. point 0 nongenic,nongenic -462 upstream,690 downstream {F58E2.3},{F58E2.4} 3183 CB6878_redo IV 3525903 1 T A 170 1.00 63 62 0 9 9 @aaaaaaaaa point 0 three_prime_UTR none {Y37E11C.1} 3185 CB6878_redo IV 3746241 1 G A 36 1.00 63 62 11 14 25 @A,.Aaaa.A.A,,,a...,aAAAaa point 0 missense GCT->ACT[Ala->Thr] {Y37E11AR.2} 3186 CB6878_redo IV 3864660 1 G C 72 1.00 63 0 0 4 4 @cCCC point 0 nongenic,nongenic -2566 upstream,365 into {F37C4.4b.2},{F28F9.4} 3199 CB6878_redo IV 4166340 1 A T 255 1.06 63 62 0 22 22 @TTtTtttttTTTTtTtTttttt point 0 nongenic,nongenic -1690 upstream,170 downstream {K08D10.5},{K08D10.7.1,K08D10.7.2} 3201 CB6878_redo IV 4312872 1 C T 211 1.00 63 62 8 30 38 @,tTTttTTT.,TTT,,.tTtttTTtTtttttT,tTTt. point 0 missense CGG->TGG[Arg->Trp] {F15E6.1} 3203 CB6878_redo IV 4336352 1 A T 108 1.00 63 62 4 10 14 @,TTtt.ttt.t,tT point 0 nongenic,nongenic -474 upstream,-986 upstream {W03B1.7},{W03B1.3.2} 3212 CB6878_redo IV 4527527 1 C T 111 1.00 63 62 11 23 34 @.TtTtttttttttT,.T,TT,t.,TT.T.t,Tt. point 0 nongenic -2596 upstream {ZK180.6} 3214 CB6878_redo IV 4593006 1 C T 16 1.00 63 34 1 3 4 @ttt, point 0 nongenic -1041 upstream {F28E10.5} 3216 CB6878_redo IV 4695312 1 G T 230 8.94 63 62 0 19 19 @tttttttttttttttttTt point 0 nongenic 1506 into {T22B11.1} 3217 CB6878_redo IV 4710549 1 C T 21 1.00 63 62 9 14 23 @TtT,tt,tt.,TTtTt,.t..t, point 0 five_prime_UTR none {K08F11.3.2,K08F11.3.3} 3218 CB6878_redo IV 4710607 1 C T 172 1.00 63 62 6 18 24 @ttT,t,TT.tt,tTttt.tttT,g point 0 five_prime_UTR none {K08F11.3.2,K08F11.3.3} 3222 CB6878_redo IV 4972666 1 C T 255 1.00 63 62 0 23 23 @tTTtTTTtttTtttTtttttttT point 0 missense,SNP GTT->ATT[Val->Ile],none {Y9C9A.15},{haw56128} 3236 CB6878_redo IV 5208043 1 A T 9 1.00 63 62 2 3 5 @.,TtT point 0 missense TTC->ATC[Phe->Ile] {Y59E9AL.4.1,Y59E9AL.4.2} 3237 CB6878_redo IV 5308471 1 A C 255 1.00 63 62 0 22 22 @CCCCCCCCCCCCcccccCCcCC point 0 nongenic,nongenic -1751 upstream,-99 upstream {ZK354.3},{ZK354.9} 3238 CB6878_redo IV 5363807 1 C T 105 1.00 63 62 10 20 30 @t.TTT,,t.TT,T.t.T.tTTt,t,tTttt point 0 nongenic,nongenic,nongenic,nongenic,nongenic -733 upstream,-740 upstream,404 into,446 into,451 into {F41H10.4.1},{F41H10.4.2},{F41H10.6b},{F41H10.6c},{F41H10.6a} 3239 CB6878_redo IV 5426794 1 G T 255 1.00 63 62 0 21 21 @TTTTtTttTTtTtTTtttTtt point 0 SNP none {haw56297} 3248 CB6878_redo IV 5588033 1 A T 91 1.00 63 4 0 4 4 @tTTT point 0 nongenic,nongenic,nongenic -13602 upstream,-13936 upstream,3387 into {F26D12.1b},{T12E12.6},{F26D12.1a} 3251 CB6878_redo IV 5673758 1 T A 137 1.00 63 62 7 16 23 @,aa..aA.AaaaaaA.,AAA,AA point 0 SNP none {pas1786} 3252 CB6878_redo IV 5863176 1 C A 73 1.00 63 62 8 13 21 @.A,,,aAAAAAAA,.,.aaAA point 0 nongenic -3214 upstream {C06E7.4} 3253 CB6878_redo IV 6005894 1 T C 41 1.00 63 62 33 46 79 @,.Cc,c..,cCcc.CCcCCCC,cccc..cCcc..CCc,,,,,Cc,.C...,ccCCc,C..,cc.Cc.ccC,C,CC,Cc. point 0 nongenic 443 downstream {C46G7.3} 3254 CB6878_redo IV 6358632 1 A C 11 4.12 23 36 6 10 16 @CCC,c.CCCCC,,,g, point 0 nongenic,nongenic -11168 upstream,-3407 upstream {Y73B6BL.16},{Y73B6BL.47} 3256 CB6878_redo IV 6359857 1 A C 25 5.00 34 40 4 15 19 @,cCCC,ccCccCCCC,C,C point 0 nongenic,nongenic -12393 upstream,-2182 upstream {Y73B6BL.16},{Y73B6BL.47} 3260 CB6878_redo IV 6646382 1 G C 80 1.00 63 62 6 10 16 @.ccC,CCCcC.C,c,, point 0 five_prime_UTR,SNP none,none {C01B10.5a,C01B10.5b.1,C01B10.5b.2,C01B10.5c},{pas2157} 3274 CB6878_redo IV 6810892 1 T A 28 1.00 63 62 9 11 20 @,aAA..A.aa,aA..Aa.,A point 0 nongenic -1197 upstream {C17H12.9.1} 3275 CB6878_redo IV 6914435 1 T C 4 7.50 63 20 1 3 4 @.ccc point 0 nongenic,nongenic 914 into,918 into {T22D1.3a,T22D1.3b.2},{T22D1.3b.1} 3277 CB6878_redo IV 6990271 1 T C 95 1.00 63 62 13 23 36 @cC,.c.cCCCc.Cc.C,c,.ccCcCccc,C,,.c.c point 0 nongenic,nongenic -3351 upstream,-9311 upstream {ZK381.5a},{C25A8.5} 3282 CB6878_redo IV 7056612 1 A G 255 1.00 63 62 0 28 28 @GGGGGGGgGgGGGgGGgGGGGgggGgGg point 0 SNP none {haw57660} 3283 CB6878_redo IV 7062636 1 C T 73 1.00 63 62 11 14 25 @Ttt,,,,tTttT,.,,,.TTtTTt, point 0 nongenic -2743 upstream {Y43B11AL.1} 3295 CB6878_redo IV 7226681 1 C T 46 1.00 63 62 4 6 10 @,..,tTTttt point 0 nongenic,nongenic,nongenic -74 upstream,585 downstream,586 downstream {R13A1.10},{D2024.5b.1},{D2024.5a.1} 3300 CB6878_redo IV 7278032 1 C G 117 1.50 63 62 0 6 6 @GGGGGg point 0 nongenic,nongenic -14811 upstream,-4243 upstream {C06E4.7},{C06E4.2} 3301 CB6878_redo IV 7437875 1 C T 49 1.00 63 62 13 18 31 @t..,T..tt,ttTtTt,T.,t,.TTtTT,t. point 0 nongenic,nongenic -2311 upstream,5569 into {B0496.3c},{B0496.3a,B0496.3b} 3302 CB6878_redo IV 7440621 1 G T 120 1.00 63 62 8 18 26 @Tt.ttt.tt,TTTTttt.T.T,,.tt point 0 nongenic,nongenic,nongenic 3724 into,4012 into,435 into {B0496.3a},{B0496.3b},{B0496.3c} 3303 CB6878_redo IV 7440622 1 C A 119 1.00 63 62 8 18 26 @Aa.aaa.aa,AAAAaaa.A.A,,.aa point 0 nongenic,nongenic,nongenic 3723 into,4011 into,436 into {B0496.3a},{B0496.3b},{B0496.3c} 3304 CB6878_redo IV 7527069 1 T G 255 1.00 63 62 0 35 35 @GGGGGGGGgGGGGGgGGgGgGGgGGGggGgggggG point 0 SNP none {haw57987} 3305 CB6878_redo IV 7583925 1 C T 116 1.00 63 62 5 15 20 @TTT,tt.ttt,.ttTtt,Tt point 0 nongenic,nongenic -4989 upstream,219 downstream {F32E10.7},{F32E10.1} 3306 CB6878_redo IV 7591627 1 A C 4 9.00 0 2 3 12 15 @ccccccCCCCc,.c, point 0 missense GAA->GAC[Glu->Asp] {Y2C2A.1} 3309 CB6878_redo IV 7596411 1 A T 19 6.56 0 34 0 11 11 @Ttttttttttt point 0 missense TAT->TTT[Tyr->Phe] {Y2C2A.1} 3311 CB6878_redo IV 7596529 1 G C 51 1.00 24 50 0 8 8 @cccccccc point 0 nongenic,nongenic -9935 upstream,5985 into {F45E4.4},{Y2C2A.1} 3312 CB6878_redo IV 7596545 1 T A 51 1.00 24 50 0 8 8 @aaaaaaaa point 0 nongenic,nongenic -9919 upstream,6001 into {F45E4.4},{Y2C2A.1} 3315 CB6878_redo IV 7597178 1 T A 15 3.00 0 2 0 5 5 @AAaAA point 0 nongenic,nongenic -9286 upstream,6634 into {F45E4.4},{Y2C2A.1} 162439 CB6878_redo IV 7598924 68 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered codon 2626 to codon 2630 (0 % of 4901 codons) {Y2C2A.1} 3324 CB6878_redo IV 7600485 1 A T 255 1.00 63 62 0 36 36 @tTTtTtttttTttTTtTTtTttTTtTttTTtTTTTT point 0 missense,SNP CAA->CAT[Gln->His],none {Y2C2A.1},{haw58035} 3325 CB6878_redo IV 7607350 1 A G 137 2.19 63 62 0 13 13 @gggGgggGggGGG point 0 nongenic,nongenic -12263 upstream,886 into {F45E4.3b.1},{F45E4.4} 3326 CB6878_redo IV 7607351 1 A G 138 3.56 63 62 0 14 14 @gggGgggGggGGGg point 0 nongenic,nongenic -12262 upstream,887 into {F45E4.3b.1},{F45E4.4} 3327 CB6878_redo IV 7607353 1 A G 96 3.56 63 62 1 13 14 @gggGgggGggGGG. point 0 nongenic,nongenic -12260 upstream,889 into {F45E4.3b.1},{F45E4.4} 3328 CB6878_redo IV 7644588 1 T C 46 1.00 63 62 10 13 23 @,C.,C,cCCC,,,c.CC,,CCCc point 0 nongenic,nongenic -1507 upstream,472 downstream {F45E4.8.1},{F45E4.9} 3333 CB6878_redo IV 8015831 1 G C 254 1.00 63 62 0 17 17 @cCCCCCcCCCCcCCCCC point 0 nongenic,nongenic -363 upstream,211 downstream {C26B2.7},{C26B2.8} 3335 CB6878_redo IV 8071897 1 G C 52 3.00 63 4 1 6 7 @CCC,CCc point 0 nongenic,nongenic,nongenic 4815 into,4995 into,9248 into {C18F3.2a},{C18F3.2d},{C18F3.2b,C18F3.2c} 3337 CB6878_redo IV 8098440 1 C T 66 1.00 63 62 13 20 33 @Tt,tTT.ttTt.,Tt,TT,t....t.,tTT,tt point 0 nongenic,nongenic -11806 upstream,-1458 upstream {C18F3.4},{Y42H9AR.2} 3338 CB6878_redo IV 8308758 1 A G 144 1.00 63 62 8 20 28 @G,,.gG,GgG.gg,gg.GgggGGGGG.G point 0 silent CAT->CAC[His->His] {F35H10.10} 3342 CB6878_redo IV 8468403 1 C T 255 6.50 63 62 0 22 22 @TTTTtTTTTTtTTTttTttTtt point 0 nongenic,nongenic,nongenic,nongenic -5677 upstream,-8143 upstream,3570 into,3654 into {C28C12.11b},{T01B11.4},{T01B11.7.2},{T01B11.7.1} 3364 CB6878_redo IV 8566666 1 A C 126 7.31 63 62 0 9 9 @CCCCCCCCC point 0 nongenic,nongenic -2086 upstream,-498 upstream {Y59H11AM.3},{Y59H11AM.2} 3365 CB6878_redo IV 8566667 1 G C 124 7.31 63 62 0 9 9 @CCCCCCCCC point 0 nongenic,nongenic -2087 upstream,-497 upstream {Y59H11AM.3},{Y59H11AM.2} 3400 CB6878_redo IV 8575991 1 A T 14 7.00 0 2 0 4 4 @ttTT point 0 nongenic -9532 upstream {Y59H11AR.2a.2} 6208 CB6878_redo IV 8578207 0 X X -1000 -999.99 -1000 -1000 5 -4 1 @,,,GGG,GGg,G indel 0 nongenic -7317 upstream {Y59H11AR.2a.2} 3413 CB6878_redo IV 8602902 1 C A 255 1.00 63 62 0 15 15 @aAAaAAaaaAAAAAa point 0 SNP none {haw58423} 3414 CB6878_redo IV 8602934 1 C A 255 1.00 63 62 0 15 15 @aAAAAAaAaaAaaAa point 0 SNP none {haw58424} 3418 CB6878_redo IV 8894794 1 A C 97 4.00 63 62 9 11 20 @C,c,cc,..C,.cc.ccCc. point 0 nongenic,nongenic -6832 upstream,707 into {C27B7.5},{C27B7.4} 3422 CB6878_redo IV 9038439 1 G A 255 1.00 63 62 0 30 30 @AaAaaaaAaaAaAAAAAaAaAAAaaAAAaA point 0 SNP none {haw58542} 3423 CB6878_redo IV 9046941 1 T A 24 1.31 63 62 4 4 8 @....AaaA point 0 nongenic,nongenic -1608 upstream,-23048 upstream {Y73F4A.1},{ZC410.1a} 3429 CB6878_redo IV 9048306 1 A G 255 6.38 63 62 19 236 255 @GGGGGGGGGGGgggGGGGGGGGGGGGGGGGGGggggggGGGGGGGGGggGGGGGGGGgggggg.GGGGGGGGGGGGGGGGGggggggggGGGGGGGGGG point 0 SNP none {haw58549} 3431 CB6878_redo IV 9048807 1 C G 125 0.00 40 62 0 4 4 @ggGG point 0 nongenic,nongenic -21182 upstream,-3474 upstream {ZC410.1a},{Y73F4A.1} 3432 CB6878_redo IV 9048812 1 T A 128 1.00 63 62 0 6 6 @AAAAAa point 0 nongenic,nongenic -21177 upstream,-3479 upstream {ZC410.1a},{Y73F4A.1} 3435 CB6878_redo IV 9155021 1 A T 126 1.00 63 32 0 9 9 @Ttttttttt point 0 SNP none {haw58572} 3436 CB6878_redo IV 9168200 1 C T 50 1.00 63 62 9 14 23 @t,,T,T..ttT..T.TTTTTTT. point 0 nongenic,nongenic -16843 upstream,-3092 upstream {C07C7.1},{F23B2.12} 6211 CB6878_redo IV 9240533 0 X X -1000 -999.99 -1000 -1000 4 -3 1 @....GGg indel 5 nongenic,nongenic -662 downstream,-832 downstream {Y11D7A.3a},{Y11D7A.3b} 3439 CB6878_redo IV 9240537 1 C G 3 1.25 63 2 1 3 4 @.GGg point 0 nongenic,nongenic 658 into,828 into {Y11D7A.3a},{Y11D7A.3b} 3440 CB6878_redo IV 9240538 1 C G 3 1.25 63 2 1 3 4 @.GGg point 0 nongenic,nongenic 657 into,827 into {Y11D7A.3a},{Y11D7A.3b} 3441 CB6878_redo IV 9251676 1 C T 29 1.00 63 8 2 3 5 @,.TTt point 0 nongenic,nongenic 350 into,836 downstream {Y11D7A.8},{Y11D7A.7} 3442 CB6878_redo IV 9269038 1 T C 255 1.00 63 62 0 30 30 @CccccCCcCccCcccCccCCcCCcCccccc point 0 nongenic,nongenic -1035 upstream,-2498 upstream {Y11D7A.13},{Y11D7A.19} 3443 CB6878_redo IV 9370614 1 T G 14 1.00 63 62 5 6 11 @..,..ggGgGg point 0 nongenic,nongenic -4130 upstream,-870 upstream {C10C5.1},{C10C5.2} 3456 CB6878_redo IV 9550392 1 A G 53 1.00 63 62 17 22 39 @G,.gg..G,,.ggggG,g,,GgG.,,GgGgGG,,g.Gg. point 0 nongenic,nongenic 3150 into,4088 into {T05A1.5a},{T05A1.5b} 3457 CB6878_redo IV 9745669 1 G A 255 1.25 63 62 0 22 22 @aAaAAAaaAaAaAAaAaAAAaa point 0 missense CAC->TAC[His->Tyr] {C28D4.5} 6215 CB6878_redo IV 10112497 3 X X -1000 -999.99 -1000 -1000 7 -5 2 @.,,,,.. indel -3 SNP none {uCE4-1092} 3470 CB6878_redo IV 10215217 1 C G 61 1.00 63 62 13 21 34 @g..G.g.,ggGggg,GGg,Gg.GggG.g,,gG,, point 0 silent CGG->CGC[Arg->Arg] {C24F3.4} 3474 CB6878_redo IV 10329614 1 G T 68 1.00 63 18 2 6 8 @T.,tTtTt point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -8490 upstream,1244 into,137 into,1501 into,1519 into,1943 into,2186 into,463 into,4648 into,5374 into,558 into {R09E10.1.2},{K11E8.1i.1},{K11E8.1n},{K11E8.1m},{K11E8.1o},{K11E8.1k.2},{K11E8.1a},{K11E8.1l.2},{K11E8.1c.1,K11E8.1c.2,K11E8.1d.2,K11E8.1e.1,K11E8.1e.2,K11E8.1f.1,K11E8.1f.2,K11E8.1g.1,K11E8.1g.2,K11E8.1h.1,K11E8.1h.2,K11E8.1p},{K11E8.1d.1,K11E8.1k.1,K11E8.1l.1},{K11E8.1i.2} 3475 CB6878_redo IV 10400434 1 C T 255 1.00 63 62 3 19 22 @tttTTTT,tTttTtTT,tTT,T point 0 nongenic,nongenic -3556 upstream,-5507 upstream {R10H10.5},{R10H10.4} 3476 CB6878_redo IV 10414831 1 C G 31 1.00 63 14 0 4 4 @GGGG point 0 missense CAG->CAC[Gln->His] {F13B12.6.1,F13B12.6.2} 3477 CB6878_redo IV 10425373 1 T G 68 1.00 63 12 1 6 7 @GGGGGG, point 0 nongenic,nongenic,nongenic -763 upstream,-765 upstream,837 downstream {F13B12.1.1},{F13B12.1.2},{F13B12.2} 3478 CB6878_redo IV 10425374 1 G T 30 1.00 63 12 2 4 6 @TTT,T, point 0 nongenic,nongenic,nongenic -764 upstream,-766 upstream,836 downstream {F13B12.1.1},{F13B12.1.2},{F13B12.2} 3479 CB6878_redo IV 10425376 1 C G 12 1.00 63 30 1 4 5 @GGGG, point 0 nongenic,nongenic,nongenic -766 upstream,-768 upstream,834 downstream {F13B12.1.1},{F13B12.1.2},{F13B12.2} 3480 CB6878_redo IV 10520164 1 C T 46 1.00 63 62 13 18 31 @tt.TtTttT,T.tt,tt,.T.,,tTtT..., point 0 nongenic -5070 upstream {C02F4.4} 3481 CB6878_redo IV 10618253 1 C T 141 1.00 63 62 9 21 30 @tt.ttTTT,TttTT.ttTtTT,T,.tT... point 0 silent AGC->AGT[Ser->Ser] {R09H10.4} 3482 CB6878_redo IV 10734685 1 C T 81 1.00 63 62 9 13 22 @,.,,t,,ttttT,tTT.TttT, point 0 nongenic,nongenic,nongenic -610 upstream,-641 upstream,-80 upstream {ZC168.4.2},{ZC168.4.1},{ZC168.3} 3483 CB6878_redo IV 10793215 1 G A 152 1.00 63 62 5 14 19 @A.AaAAA.a,AAaa.a,AA point 0 missense,SNP GAA->AAA[Glu->Lys],none {C06G8.2},{haw59175,pas22979} 3484 CB6878_redo IV 10841846 1 G A 36 1.69 63 62 15 19 34 @.,A,A.aA,AA,,,,Aaa,.AaAa,aAaaa.a., point 0 missense GCT->GTT[Ala->Val] {T11G6.5a,T11G6.5b.1,T11G6.5b.2,T11G6.5b.3} 3488 CB6878_redo IV 10878679 1 G A 255 1.00 63 62 0 21 21 @AaaaaaaaaAaaAaAaAAAAa point 0 missense,SNP CGT->TGT[Arg->Cys],none {F13E9.6},{haw59179} 3489 CB6878_redo IV 10894239 1 G T 25 1.00 63 40 2 3 5 @.C,tt point 0 missense GAC->GAA[Asp->Glu] {F13E9.8} 3490 CB6878_redo IV 10894240 1 T C 41 1.00 63 24 2 5 7 @.,CccCc point 0 missense GAC->GGC[Asp->Gly] {F13E9.8} 3491 CB6878_redo IV 10931102 1 G T 16 1.00 63 62 15 16 31 @.tt,T,t.,.,TT,.TT,,t,TT.Tt,,TTt point 0 missense CGT->AGT[Arg->Ser] {ZK593.5} 3492 CB6878_redo IV 10943769 1 A G 48 8.62 63 62 15 240 255 @GGGGGgggGGGGGGgGGggggGgGGGGgggG,gggggGGgggGGGGGGGggggggggggggggGGGGGGGGGGggggggGGGGGGGGGGGggggggggg point 0 nongenic 931 downstream {ZK593.9} 3497 CB6878_redo IV 10950096 1 A T 9 1.00 63 62 36 39 75 @tTTtt,,.t.,,t.tttTttTTt,t,,TTt,tTTttT,tttttttTT,...tT...tT......,..,.,...,. point 0 silent GTA->GTT[Val->Val] {Y69E1A.2} 3498 CB6878_redo IV 10950263 1 A C 69 1.44 63 62 28 61 89 @CCcC,CCcc.c.,CCC,.c.C.cC.C,CC,CC,,.CC,cC,ccGc,CCCCcCC,,c,CCCCCCccCCCCC.CCCcc.C..C,C.,,CCC point 0 missense,SNP AAG->ACG[Lys->Thr],none {Y69E1A.2},{uCE4-1129} 3499 CB6878_redo IV 10950264 1 G A 66 1.44 63 62 29 57 86 @A,AAaa.a.,AAA,.a.A.aA.A,AA,AA,,.AA,aA,aa,a,AAAAaAA,,a,AAAAAAaaAAAAA.AAAaa.A..A,A.,,AAA point 0 silent,SNP AAG->AAA[Lys->Lys],none {Y69E1A.2},{uCE4-1130} 3500 CB6878_redo IV 10950402 1 G A 120 1.00 63 62 28 95 123 @A,AA.AaaaAa.a,.,aAA,A,AaAaaA,,AAA.aaAaAAa.AAaAaAAAa.aA..,,AAa.,aa.aaAaAAa.aa,AAAaA,aAAAaAAAAaAAAA,A point 0 silent,SNP GGG->GGA[Gly->Gly],none {Y69E1A.2},{uCE4-1131} 3501 CB6878_redo IV 10950911 1 A G 54 1.00 63 62 40 76 116 @G,,Ggg,GGGGGgG,,,gG,g,gggG,GggggggGG.gg,,gg,GggGGG,g.g.G.G,,gg,GG,GG.Gggg.gg,.gGg,Ggg..g..gg.G,gg., point 0 silent GCA->GCG[Ala->Ala] {Y69E1A.2} 3502 CB6878_redo IV 10979607 1 G A 45 1.00 63 62 7 10 17 @aa.a,,aAAaaAa,,.. point 0 nongenic -2430 upstream {Y43E12A.2} 3503 CB6878_redo IV 10984634 1 T C 3 1.00 63 62 33 34 67 @.CC.c.c.,,c,CC,..c,.,,.c,c.c.,,,,cCcc..Cc,C,C.c..cCCc.CC,cc,cc.Cccc point 0 three_prime_UTR none {Y43E12A.2} 3509 CB6878_redo IV 11009137 1 G A 255 1.00 63 62 0 28 28 @AAAaaaAaaAAaaaAAaAaAaAAaAaaA point 0 nongenic,nongenic -126 upstream,862 downstream {F13H10.6},{F13H10.2a} 3516 CB6878_redo IV 11071114 1 C T 181 2.62 63 62 403 -148 255 @T,TTTTTTTTTT,TT,T,,,TTTTTTTT.t.t.T,T,,,TT,TTTTT,TTTT,tttttttt.TTTT,TTTT,TTTT,T,TTT,T,TTTTTT,tt.tt.T point 0 nongenic 884 downstream {Y5F2A.3} 3517 CB6878_redo IV 11071123 1 T C 255 1.56 63 62 0 255 255 @CCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc point 0 SNP none {haw59203} 3518 CB6878_redo IV 11071124 1 T A 67 1.62 63 62 281 -26 255 @,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,....a.,,,,,,,,,,,,,,,,,,,,,,,,,,,,.....a..,,,,,,,,,A,,,,,,,A,,,,, point 0 nongenic 894 downstream {Y5F2A.3} 3550 CB6878_redo IV 11180495 1 A G 255 1.00 63 62 0 25 25 @GGgGGGGgggGgggGggGGGGGgGG point 0 missense,SNP ATT->GTT[Ile->Val],none {R07H5.2a.1,R07H5.2a.2,R07H5.2b},{haw59219} 3553 CB6878_redo IV 11226241 1 A C 55 2.25 63 54 0 20 20 @cCcCcCccccccccCcccgC point 0 missense CAA->CCA[Gln->Pro] {C29F4.1} 3554 CB6878_redo IV 11283959 1 C A 143 1.00 63 62 7 19 26 @,,aAAA,AAAA.Aaaa..A.aAAAAa point 0 nongenic -3821 upstream {F54D1.6} 3555 CB6878_redo IV 11312575 1 G A 152 1.00 63 62 4 12 16 @AAa,,.Aaa,aAAaaa point 0 three_prime_UTR none {B0035.2} 3557 CB6878_redo IV 11551950 1 A G 98 1.00 63 42 1 5 6 @.GgGgG point 0 nongenic -19 upstream {F12F6.9} 3559 CB6878_redo IV 11609427 1 T C 3 3.44 0 0 3 4 7 @,CCCC., point 0 nongenic 559 into {Y24F12A.3} 3567 CB6878_redo IV 11951210 1 C G 152 1.00 63 62 7 17 24 @gG.gG.G,GGg,,gGgGG,GG,gg point 0 nongenic,nongenic,nongenic -1423 upstream,-2001 upstream,647 into {ZK829.2},{ZK829.4.1},{ZK829.5} 3569 CB6878_redo IV 12048852 1 A G 85 0.00 63 62 0 4 4 @GGGG point 0 nongenic,nongenic,nongenic -1971 upstream,615 into,979 downstream {T12G3.2b.2},{T12G3.4},{T12G3.8} 3570 CB6878_redo IV 12048854 1 A G 84 0.00 63 62 0 4 4 @GGGG point 0 nongenic,nongenic,nongenic -1973 upstream,617 into,977 downstream {T12G3.2b.2},{T12G3.4},{T12G3.8} 3571 CB6878_redo IV 12069459 1 G A 255 1.00 63 62 0 12 12 @AaAaaaAAaaAa point 0 SNP none {haw59564} 3572 CB6878_redo IV 12074293 1 T C 122 1.00 63 62 12 24 36 @C,Cc..ccC,Cc,cccCcc.C.,CC,cCc,CCc,c. point 0 missense TGT->CGT[Cys->Arg] {K08E4.5} 3575 CB6878_redo IV 12105545 1 A T 255 1.00 63 62 0 20 20 @tTtTTtTtTTTTTttTttTT point 0 three_prime_UTR none {F11A10.4} 3576 CB6878_redo IV 12138205 1 T C 201 6.94 63 62 0 21 21 @CCCCCCCCCCCCCCCCCCCCC point 0 nongenic,nongenic,nongenic -888 upstream,623 downstream,785 downstream {B0001.4},{B0001.8.1},{B0001.8.2,B0001.8.3} 3580 CB6878_redo IV 12239969 1 A C 106 1.50 63 62 0 4 4 @CcCC point 0 nongenic -1048 upstream {Y39C12A.6} 3583 CB6878_redo IV 12248612 1 C T 5 9.00 0 18 1 5 6 @TttTt. point 0 nongenic -3844 upstream {Y39C12A.7} 3584 CB6878_redo IV 12248644 1 A G 15 3.44 0 14 0 7 7 @GGGGGGG point 0 nongenic -3876 upstream {Y39C12A.7} 3585 CB6878_redo IV 12266569 1 G A 69 1.00 63 62 9 20 29 @AA.Aaa,A.a,.a,,aaa,.AaaaaaaaA point 0 missense GCT->GTT[Ala->Val] {C42C1.2} 3591 CB6878_redo IV 12318208 1 T C 3 9.44 0 2 22 94 116 @c.ccccccc,..CCccc.cccC,CCCc,CCCCCc,CCC.Cc,.,CcC,CCcCCCC.CcCCC,CCcc.C.ccCCCCCCCcc.cCC.cCCCcC,CCCCCCC point 0 nongenic,nongenic -6632 upstream,-9120 upstream {K09E10.2},{F19B6.3} 3609 CB6878_redo IV 12334254 1 C A 255 1.00 63 62 0 25 25 @AAaAaAAAAAAAaAAAaaaaAaaAA point 0 nongenic,nongenic,nongenic -3294 upstream,-3393 upstream,316 into {F19B6.4},{F19B6.2a},{F19B6.1a,F19B6.1b} 3610 CB6878_redo IV 12334255 1 C A 255 1.00 63 62 0 25 25 @AaAaAAAAAAAaAAAaaaaAaaAAA point 0 nongenic,nongenic,nongenic -3293 upstream,-3394 upstream,315 into {F19B6.4},{F19B6.2a},{F19B6.1a,F19B6.1b} 6222 CB6878_redo IV 12336928 0 X X -1000 -999.99 -1000 -1000 5 -2 3 @,.,..gGg indel 0 nongenic,nongenic -2358 upstream,-621 upstream {F19B6.1a,F19B6.1b},{F19B6.4} 3613 CB6878_redo IV 12341156 1 C T 6 1.00 63 20 3 4 7 @ttTt,.. point 0 nongenic,nongenic -8756 upstream,769 downstream {ZC518.1a,ZC518.1b,ZC518.1c},{F19B6.4} 3616 CB6878_redo IV 12393525 1 C A 255 1.00 63 62 0 35 35 @AaaaAaAaaAAaAAAaaAAAAAaaaaAAaaaAaAa point 0 missense,SNP ATG->ATT[Met->Ile],none {F28D1.9},{haw59770} 3617 CB6878_redo IV 12430402 1 A T 128 7.69 63 62 0 6 6 @tttttT point 0 nongenic,nongenic,nongenic,nongenic -1917 upstream,-2205 upstream,2078 into,2091 into {F08G5.4},{F08G5.7},{F08G5.5.2},{F08G5.5.1} 3620 CB6878_redo IV 12430475 1 G C 116 3.19 63 62 0 5 5 @ccccc point 0 nongenic,nongenic,nongenic,nongenic -1990 upstream,-2132 upstream,2005 into,2018 into {F08G5.4},{F08G5.7},{F08G5.5.2},{F08G5.5.1} 3621 CB6878_redo IV 12430477 1 A G 151 3.69 63 62 0 7 7 @ggggggg point 0 nongenic,nongenic,nongenic,nongenic -1992 upstream,-2130 upstream,2003 into,2016 into {F08G5.4},{F08G5.7},{F08G5.5.2},{F08G5.5.1} 3622 CB6878_redo IV 12430533 1 C T 248 5.38 63 62 0 17 17 @TtttttttttttTTTTT point 0 nongenic,nongenic,nongenic,nongenic -2048 upstream,-2074 upstream,1947 into,1960 into {F08G5.4},{F08G5.7},{F08G5.5.2},{F08G5.5.1} 3625 CB6878_redo IV 12433585 1 T G 5 1.00 63 24 0 4 4 @AaaG point 0 nongenic,nongenic -2210 upstream,978 into {F08G5.6},{F08G5.7} 3630 CB6878_redo IV 12545902 1 C T 255 1.00 63 62 0 33 33 @TTTTtTttTttTTtTTTTTtTtttTTtTTTtTt point 0 SNP none {haw59832} 3631 CB6878_redo IV 12581671 1 C T 255 1.00 63 62 0 14 14 @tTttTttTtttttt point 0 SNP none {haw59843} 3632 CB6878_redo IV 12697437 1 G C 255 1.00 63 62 0 23 23 @CccCcCcccCcCCCCCcCCCCCc point 0 SNP none {haw59886} 3633 CB6878_redo IV 12730473 1 A G 113 5.38 63 62 1 4 5 @GgGg, point 0 SNP none {haw59889} 3639 CB6878_redo IV 12781072 1 A C 179 1.00 63 62 0 11 11 @CCCCCCCCCCc point 0 nongenic,nongenic,nongenic -23429 upstream,-7953 upstream,5870 into {C36H8.3.1},{F07C6.3},{ZK897.1} 3640 CB6878_redo IV 12784269 1 G A 72 1.00 63 62 10 16 26 @a,,.a,.aAaAaAa.aAaAa....aN point 0 nongenic,nongenic,nongenic -26626 upstream,-4756 upstream,2673 into {C36H8.3.1},{F07C6.3},{ZK897.1} 3641 CB6878_redo IV 12794626 1 G A 136 1.00 63 62 8 19 27 @.aAaAAaa,AaaaAAAaA,,.a...aa point 0 missense TGT->TAT[Cys->Tyr] {F07C6.1} 3646 CB6878_redo IV 12979116 1 T C 255 1.00 63 62 0 28 28 @CcCCCcCcCCCcCCcCcCCCcCCcCCCc point 0 SNP none {haw60243} 3647 CB6878_redo IV 13092702 1 G C 255 1.00 63 62 0 21 21 @cccccccCccCccCccCcCcc point 0 nongenic,nongenic,nongenic -1272 upstream,-1666 upstream,1111 into {C39E9.12.1,C39E9.12.2},{C39E9.9},{C39E9.11} 3648 CB6878_redo IV 13127459 1 T C 255 1.00 63 62 0 24 24 @cCCcCccCCCcCcCCCCcCccCCc point 0 SNP none {haw60403} 6227 CB6878_redo IV 13188308 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @,.,,,gg indel 0 nongenic -1426 upstream {F58D2.2} 3649 CB6878_redo IV 13188309 1 C G 11 1.00 63 62 3 4 7 @gGGG... point 0 nongenic -1424 upstream {F58D2.2} 3653 CB6878_redo IV 13451972 1 T C 255 1.00 63 62 0 24 24 @CCccCCCcCCccCCcCccCCccCc point 0 SNP none {haw60794} 3658 CB6878_redo IV 13470854 1 T A 9 1.00 63 62 4 6 10 @,..,aAaAaA point 0 nongenic,nongenic -1618 upstream,322 into {Y38H8A.3},{Y38H8A.4} 3659 CB6878_redo IV 13490388 1 A C 28 1.00 63 62 3 5 8 @.,.CcCcC point 0 nongenic,nongenic -2149 upstream,12425 into {Y45F10A.7a},{Y45F10A.6a,Y45F10A.6b,Y45F10A.6c} 3663 CB6878_redo IV 13549411 1 T A 72 3.62 63 62 25 230 255 @..,...,..,.,.,.,AAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAA.AAAAAAAAAAAAAAAAAA.aAAAAAAAAAAAAAAAAAAAAAA,AAAA point 0 nongenic,nongenic,nongenic -1211 upstream,209 downstream,317 downstream {F52G2.3.1},{Y45F10B.13b},{Y45F10B.13a,Y45F10B.13c} 3665 CB6878_redo IV 13563245 1 G C 255 1.00 63 62 0 27 27 @cCCcCccccCCcCcCCCccCccccccc point 0 SNP none {haw60948} 3666 CB6878_redo IV 13563393 1 G T 255 1.00 63 62 0 23 23 @tTttTTtTTtttTTTtTttTTtt point 0 SNP none {haw60949} 3667 CB6878_redo IV 13602476 1 T A 255 1.00 63 62 0 31 31 @aAAaaaaaaAAaaAAaaaAaAaaaaAAAAaa point 0 SNP none {haw60978} 3668 CB6878_redo IV 13662115 1 T G 255 1.00 63 62 0 26 26 @GGGgGgGgGGgGgGGgggGggggggg point 0 SNP,three_prime_UTR none,none {haw61075},{Y45F10C.2} 3675 CB6878_redo IV 13695677 1 C G 255 1.00 63 62 0 28 28 @gGGGGGGGGGgGGgGGgggggGGgGgGg point 0 nongenic -6914 upstream {T23G4.2} 3676 CB6878_redo IV 13695678 1 G C 255 1.00 63 62 0 28 28 @tCCCCCCCCCcCCcCCcccccCCcCcCc point 0 nongenic -6915 upstream {T23G4.2} 3683 CB6878_redo IV 13793476 1 A C 161 1.00 63 62 0 7 7 @cCcccCc point 0 nongenic,nongenic -4787 upstream,2715 into {Y45F10D.9},{Y45F10D.7} 3684 CB6878_redo IV 13807918 1 T G 21 1.00 63 62 4 6 10 @,,gg,,gggg point 0 nongenic -306 upstream {Y45F10D.14} 3686 CB6878_redo IV 13838595 1 G A 255 1.00 63 62 0 25 25 @AAAaaaAaaaAaAAAAaAAAaAaAA point 0 nongenic,nongenic,nongenic,nongenic -15726 upstream,-2237 upstream,6085 into,6351 into {B0513.6},{H08M01.1},{H08M01.2a},{H08M01.2b} 3698 CB6878_redo IV 14217779 1 A C 5 1.00 63 62 1 3 4 @.ccc point 0 nongenic,nongenic -2062 upstream,1497 into {F02H6.5},{F02H6.4} 3701 CB6878_redo IV 14347514 1 C A 255 1.00 63 62 0 29 29 @aaaaaaAaAaaaAAAaaaAaaAaaAaaAA point 0 SNP none {haw62226} 3718 CB6878_redo IV 14691766 1 G A 255 1.00 63 62 0 18 18 @AaAaaAAAAAaaaAAaaa point 0 SNP none {haw62984} 3722 CB6878_redo IV 14992694 1 G T 255 1.00 63 62 0 15 15 @TttttTttTtTtttT point 0 SNP none {haw63537} 3723 CB6878_redo IV 14998777 1 C T 255 1.00 63 62 0 16 16 @TTtttTTtTTTtTTtT point 0 SNP none {haw63554} 3762 CB6878_redo IV 15313323 1 A T 255 1.00 63 62 0 18 18 @TTTtttTTTTTtTTTttT point 0 SNP none {haw64171} 3778 CB6878_redo IV 15702915 1 G A 10 1.00 63 12 2 3 5 @..aaa point 0 nongenic,nongenic -21409 upstream,-8020 upstream {Y105C5A.26},{Y105C5A.15} 3779 CB6878_redo IV 15749705 1 A G 255 1.00 63 62 0 22 22 @ggGGGgGGgggGGggGGGggGG point 0 SNP none {haw64925} 6237 CB6878_redo IV 15798017 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @,..,gg indel 1 nongenic 64 downstream {Y105C5A.22} 3794 CB6878_redo IV 15798018 1 T G 47 1.81 63 22 0 6 6 @GggGgg point 0 nongenic 62 downstream {Y105C5A.22} 3802 CB6878_redo IV 15871052 1 T G 255 1.00 63 62 0 29 29 @GgggGgGGGGgggGgGggggGGGGGGGGG point 0 missense,SNP TTG->TGG[Leu->Trp],none {Y105C5B.1},{haw65169} 3804 CB6878_redo IV 15925394 1 A T 255 1.00 63 62 0 19 19 @ttTtttttTtttTTTTTTt point 0 SNP none {haw65323} 3805 CB6878_redo IV 15935820 1 T C 255 1.00 63 62 0 22 22 @CCccccCCcCccCCCcCCcCcC point 0 SNP none {haw65337} 3807 CB6878_redo IV 16085619 1 C A 255 1.00 63 62 0 16 16 @aaaAAaaaaaaAAAaa point 0 SNP none {haw65640} 3816 CB6878_redo IV 16199503 1 T C 255 1.00 63 62 0 37 37 @cCcCcCccccccccCCCCcCcCCCCCCCcCCCCcCcc point 0 silent CTT->CTC[Leu->Leu] {Y7A9A.1} 3823 CB6878_redo IV 16223491 1 G C 4 5.62 63 0 1 4 5 @C,ccc point 0 nongenic,nongenic -1872 upstream,-2514 upstream {H25K10.3},{H25K10.4} 3847 CB6878_redo IV 16533636 1 T A 255 1.19 63 62 0 20 20 @AAAaAaaaaAAaaaAAAAaA point 0 missense,SNP TTT->TTA[Phe->Leu],none {Y51H4A.6},{haw66558} 3860 CB6878_redo IV 16586856 1 C G 8 1.00 63 0 1 5 6 @ggggg, point 0 nongenic -8351 upstream {Y51H4A.8} 3867 CB6878_redo IV 16619813 1 C G 212 1.00 63 62 0 10 10 @GGGgGggGgg point 0 SNP none {haw66710,snp_Y51H4A[11]} 3874 CB6878_redo IV 16760578 1 C T 255 1.19 63 62 0 40 40 @tTTttttttttTTtTtTTTtttTTTTtTttTtTttTTtTt point 0 SNP none {haw66850} 3875 CB6878_redo IV 16786381 1 G T 255 1.00 63 62 0 27 27 @TTTTTTtTTTTTtTtTTtTTtttTTTt point 0 SNP none {haw66890} 3884 CB6878_redo IV 16848870 1 A C 246 2.69 63 62 0 12 12 @CCcCcCCCcCCC point 0 nongenic,nongenic,nongenic 1084 into,430 into,704 into {Y116A8A.9.2},{Y116A8A.9.3},{Y116A8A.9.1} 3894 CB6878_redo IV 16939349 1 T G 255 1.00 63 62 0 12 12 @GgGggGgGGGgg point 0 SNP none {haw67104} 3895 CB6878_redo IV 16945230 1 A G 126 1.69 63 62 13 26 39 @gGGGg.gg.g.g.gg.GGGGG,gGGggggGg..g...,. point 0 nongenic,nongenic,nongenic -1854 upstream,-6161 upstream,1583 into {Y116A8C.12.1,Y116A8C.12.2},{Y116A8C.10b.2},{Y116A8C.9} 3900 CB6878_redo IV 17086649 1 T C 255 1.00 63 62 0 18 18 @CCcccCccCCcccccccc point 0 missense CAT->CGT[His->Arg] {Y116A8C.26a} 3903 CB6878_redo IV 17156472 1 A G 12 1.00 63 0 0 4 4 @gggg point 0 nongenic -5545 upstream {Y116A8C.40} 3904 CB6878_redo IV 17156475 1 C G 3 1.00 63 0 1 4 5 @.gggg point 0 nongenic -5548 upstream {Y116A8C.40} 3905 CB6878_redo IV 17156477 1 C G 13 1.00 63 0 0 5 5 @ggggg point 0 nongenic -5550 upstream {Y116A8C.40} 3911 CB6878_redo IV 17491300 1 G A 255 1.00 63 62 0 21 21 @AaaaaAAAaaAAAaaAaAaaA point 0 SNP none {haw67744} 3912 CB6878_redo IV 17491319 1 C T 255 1.00 63 62 0 31 31 @ttTTTttTtTttTTtTttttTtTtTTtttTT point 0 SNP none {haw67745} 3913 CB6878_redo IV 17492346 1 G A 22 1.00 63 22 3 4 7 @aaaa,,, point 0 nongenic -1893 upstream {4R79.1a} 3914 CB6878_redo IV 17492347 1 G A 22 1.00 63 22 3 4 7 @aaaa,,, point 0 nongenic -1894 upstream {4R79.1a} 5840 CB6878_redo MtDNA 3878 1 C A 255 1.00 63 62 0 255 255 @aaatAAAAaaaaaaAAAAAaaAAAAAaaaaaaaaaAAAAAAAAaaaAAAAAAAAaaaaaAAAAaaaaaAAAAAAAAAaaaaAAaaaaaaaAAAAAAaaa point 0 missense ACA->AAA[Thr->Lys] {MTCE.16} 5841 CB6878_redo MtDNA 5079 1 G A 255 1.00 63 62 0 255 255 @AAAAAAAAAAAAAAaaaaaaaaaaaaaaAAAAAAAAAAAAaaaaaaaaaaaAAAAAAAAAAAaaaaaaaaaAAAAAAAAAAAAAaaaaaaaaaaAAAAA point 0 silent GGG->GGA[Gly->Gly] {MTCE.21} 5842 CB6878_redo MtDNA 8429 1 A G 255 1.00 63 62 0 255 255 @GGGGGGGGgggtgggGGGGGGGGGGGGggggggggggggGGGGGGGGGGGgggggggggGGGGGGGGGGGGGGgggggggggggggGGGGGGGGGGGGg point 0 silent,three_prime_UTR GTA->GTG[Val->Val],none {MTCE.26},{MTCE.25} 5843 CB6878_redo MtDNA 12998 1 C T 255 1.00 63 62 1 254 255 @ttttttTttttttTTttttttTttttTTTttttttttttttttttttttTTTttttttTTTTTtttttttttttttTTttttttttt.ttttttttttt point 0 silent,three_prime_UTR GGC->GGT[Gly->Gly],none {MTCE.35},{MTCE.34} 3916 CB6878_redo V 705 1 C T 243 1.75 63 62 0 21 21 @ttTTtTtttTttTTtTtTtTt point 0 nongenic -774 upstream {cTel3X.1} 3917 CB6878_redo V 721 1 C G 255 1.69 63 62 0 30 30 @GgGgggGggGGgGgGgGgGGGGGGgGGgGG point 0 nongenic -758 upstream {cTel3X.1} 3918 CB6878_redo V 46068 1 G C 43 1.00 63 44 0 4 4 @ccCC point 0 nongenic,nongenic -2853 upstream,602 into {B0348.1},{B0348.2} 3919 CB6878_redo V 46069 1 T G 52 1.00 63 42 0 5 5 @ggGGG point 0 nongenic,nongenic -2852 upstream,603 into {B0348.1},{B0348.2} 3920 CB6878_redo V 46079 1 C A 149 1.00 63 62 0 8 8 @aaAAAAaa point 0 nongenic,nongenic -2842 upstream,613 into {B0348.1},{B0348.2} 3921 CB6878_redo V 46135 1 C G 255 1.00 63 62 0 22 22 @GGGgggggGGGGGGGGgGggGG point 0 SNP none {haw67774} 3922 CB6878_redo V 198833 1 A T 255 1.00 63 62 0 24 24 @TTTtTttTtTTTTTTTTTTTTtTT point 0 nongenic,nongenic -3894 upstream,1855 into {DC2.8},{Y108G3AL.7} 3923 CB6878_redo V 238485 1 A T 7 1.00 63 58 3 4 7 @,,.TTtt point 0 nongenic,nongenic -291 upstream,478 downstream {R02C2.1},{R02C2.6} 3924 CB6878_redo V 265179 1 C A 255 3.06 63 62 0 255 255 @AAaaAaaaaaaAAAaaaaaAAaaaAAaaaaAAAaAAAAaAAAAAAAAaAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA point 0 nongenic,nongenic -3127 upstream,-7197 upstream {Y58G8A.1},{R02C2.4} 3925 CB6878_redo V 265207 1 C A 255 1.19 63 62 0 255 255 @AAAAAAAAAAAaAAAAAAAAAAAaAAAAAAAAaAAAAAAAAAAAaAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA point 0 SNP none {haw67964} 3926 CB6878_redo V 265223 1 T C 255 3.00 63 62 188 67 255 @CCCCCCC,,,,CCCC,,CCCCCCCCCC,CCCCccCCCCCCCC.,C,CCC,CCCCCCCCCC,CCCCCCCC,CC,c..,CC,CCCCCCCCcC,CCCCCCCC point 0 nongenic,nongenic -3083 upstream,-7241 upstream {Y58G8A.1},{R02C2.4} 3927 CB6878_redo V 265892 1 G T 27 5.00 29 0 29 50 79 @TCCTCTTTTtT,CTCCctcTC,C,ttTTTtC,T,TtT,tttc,Tttt,T,,c,.,,TC,,.cc,.c...,...,,.taA point 0 nongenic,nongenic -2414 upstream,-7910 upstream {Y58G8A.1},{R02C2.4} 3928 CB6878_redo V 265967 1 A T 3 5.62 0 0 14 126 140 @gtgttttg.ttgtg,tttttgtttttgtt.tttttttttgt.tttt,ttt.tttttttttgttgttt.tttttt.ttttttgttttttttttttttttt point 0 nongenic,nongenic -2339 upstream,-7985 upstream {Y58G8A.1},{R02C2.4} 3931 CB6878_redo V 266569 1 A T 3 6.19 0 0 17 21 38 @T.,.Ttt,,t.tTT,tTTtttttt,.CcT,..,,..t. point 0 nongenic,nongenic -1737 upstream,-8587 upstream {Y58G8A.1},{R02C2.4} 3932 CB6878_redo V 266681 1 A C 3 4.12 0 2 143 112 255 @,c,,CCCC,,,,,.CC,,,C,.cC,C,,.,,,C,C.c,C,C,CC..,C,CC,.,C,,C.,c,CC.cc.,CcC,...,,C.CccCcCC,,..,C,ccc,C point 0 nongenic,nongenic -1625 upstream,-8699 upstream {Y58G8A.1},{R02C2.4} 3934 CB6878_redo V 267024 1 A C 3 3.75 0 2 129 126 255 @,C,c..c,,C,,,,..,,,,.c,.c....,,,,...c,,,c.,,cC,C,c.c,CC,,.c,,,C..c.C,.C,cc..C,CCC,c.cCcc,.c.,ccCcc, point 0 nongenic,nongenic -1282 upstream,-9042 upstream {Y58G8A.1},{R02C2.4} 3936 CB6878_redo V 306925 1 G A 170 1.00 63 62 0 9 9 @AAAAAAAAA point 0 nongenic,nongenic,nongenic -2210 upstream,1487 into,494 downstream {F33E11.3},{F33E11.6b},{F33E11.6a} 3939 CB6878_redo V 361876 1 A G 218 1.00 63 62 0 11 11 @ggggGggGggg point 0 SNP none {haw68038} 3942 CB6878_redo V 437247 1 C T 255 1.00 63 62 0 21 21 @tTttTTtttTtttTttTtTTt point 0 SNP none {haw68068,pas12058} 3952 CB6878_redo V 839125 1 G A 3 2.25 63 0 3 3 6 @..,aaA point 0 nongenic,nongenic -297 upstream,-738 upstream {K09C6.10},{K09C6.7} 3955 CB6878_redo V 907030 1 C T 255 1.00 63 62 0 18 18 @TttTtTTTTtTtTTtTTt point 0 SNP none {haw69383} 6241 CB6878_redo V 931553 0 X X -1000 -999.99 -1000 -1000 6 -1 5 @,.,.,,aaA indel 0 nongenic -4847 upstream {Y50D4C.2} 3958 CB6878_redo V 972580 1 C G 7 1.00 63 50 2 4 6 @,ggg,g point 0 nongenic,nongenic -7777 upstream,-9955 upstream {Y50D4C.4},{Y50D4C.1a} 162448 CB6878_redo V 1210662 50 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2771 to 2821 bp into {Y50D4A.1a,Y50D4A.1b} 3962 CB6878_redo V 1228847 1 T C 13 1.00 63 62 3 5 8 @CCCCC.., point 0 nongenic,nongenic,nongenic -31263 upstream,4800 into,4938 into {C39F7.1},{C39F7.2a},{C39F7.2b} 3969 CB6878_redo V 1289272 1 G A 255 7.81 63 62 0 25 25 @aAAaAaAaaaaaAAaAaaaaaAAAA point 0 SNP none {haw69959} 3980 CB6878_redo V 1638167 1 T A 3 7.06 0 0 30 58 88 @,A.,,,.a,aA,.AA,A.aAAaaa.aAAaa,AaaaAAaaaaaa.aaAAaAaAaAaA,AAaaAAaa....,,Aa,Aaa,A,.aA,,.., point 0 nongenic,nongenic -2141 upstream,1116 into {Y46H3D.2},{Y46H3D.3} 3981 CB6878_redo V 1638407 1 T A 3 6.50 0 0 23 37 60 @A,..,A.aAAAAaAa,a.aaaAAAAa,.AAA,aAAaa.aaa,Aa,.A,...a.AA,A,,, point 0 nongenic,nongenic -1901 upstream,876 into {Y46H3D.2},{Y46H3D.3} 3982 CB6878_redo V 1638979 1 A G 255 2.88 63 62 62 193 255 @,,GGT.gg,G,GG,,Gggg.gggg,G,,GGGgggg,,,,,,gggg.G,,Ggg.gg.ggg.gggg,,,G,G.ggggggggGGggggggggggggG,GGGG point 0 nongenic,nongenic -1329 upstream,304 into {Y46H3D.2},{Y46H3D.3} 3989 CB6878_redo V 1714669 1 T C 129 2.69 63 62 4 8 12 @.,..CCCCCCCC point 0 nongenic,nongenic -2574 upstream,732 into {ZK697.5},{Y46H3C.1} 3990 CB6878_redo V 1845525 1 C T 51 1.00 63 62 1 7 8 @.ttTtttt point 0 nongenic,nongenic -675 upstream,717 downstream {T10B5.7},{T10B5.8} 3994 CB6878_redo V 2019954 1 T A 31 1.00 63 18 0 4 4 @AAAA point 0 nongenic,nongenic -2657 upstream,-3415 upstream {F59A7.5b},{F59A7.2} 3995 CB6878_redo V 2087218 1 A G 255 1.00 63 62 0 28 28 @gGGgGgGgggggggggGGGgggGGGGGG point 0 missense,SNP GAT->GGT[Asp->Gly],none {F36F12.3,F36F12.3b},{pas13625} 3996 CB6878_redo V 2200881 1 A C 255 1.00 63 62 0 23 23 @ccccccCccccCcCccCCCcccc point 0 nongenic,nongenic 535 into,699 downstream {Y5H2B.5},{Y5H2B.6} 3997 CB6878_redo V 2255011 1 G A 181 2.06 63 62 0 11 11 @AAAAAAAAAAA point 0 nongenic -407 upstream {F41B5.8} 4011 CB6878_redo V 2578146 1 G C 123 1.00 63 62 0 5 5 @CccCc point 0 nongenic,nongenic -2725 upstream,244 into {C29G2.3},{C29G2.4} 4012 CB6878_redo V 2594172 1 G A 16 1.00 63 62 9 10 19 @,,A,a.AAA.aA,.,A,aa point 0 silent CCG->CCA[Pro->Pro] {F53E10.4} 4018 CB6878_redo V 2677913 1 A T 12 1.00 63 0 0 4 4 @tttt point 0 nongenic,nongenic -5309 upstream,6483 into {W02G9.2.2},{W02G9.2.1} 4020 CB6878_redo V 2731196 1 T G 5 1.00 63 34 2 3 5 @GGG.. point 0 nongenic,nongenic,nongenic -99 upstream,953 downstream,979 downstream {C24B9.9},{C24B9.1},{C24B9.14} 4035 CB6878_redo V 3017813 1 A G 255 8.62 63 62 0 28 28 @ggGGGGgGGGggGggGGGGGGGGgGGGG point 0 nongenic 546 downstream {K12D9.14} 4047 CB6878_redo V 3276304 1 G C 77 1.00 63 22 4 5 9 @.,,,Cccac point 0 nongenic,nongenic 194 downstream,780 downstream {T28A11.3},{T28A11.21} 4048 CB6878_redo V 3449539 1 T A 203 1.00 63 62 0 9 9 @AAAAAaaAA point 0 nongenic,nongenic -10177 upstream,-4663 upstream {F27E11.2a.1},{F27E11.3a,F27E11.3b} 4054 CB6878_redo V 3811972 1 A G 47 1.00 63 0 1 4 5 @,ggGG point 0 nongenic,nongenic -351 upstream,-608 upstream {H10D18.4},{H10D18.2} 4059 CB6878_redo V 4139272 1 C A 12 1.00 63 54 2 4 6 @aAaA,. point 0 nongenic,nongenic -145 upstream,461 downstream {Y45G5AL.2},{T05B4.1} 4060 CB6878_redo V 4164869 1 A C 255 1.00 63 62 0 27 27 @cCCcCCCCcCCCccCccccCCcccCcc point 0 missense ATT->CTT[Ile->Leu] {Y45G5AM.3} 4061 CB6878_redo V 4178514 1 G T 255 1.00 63 62 0 25 25 @TtttTTtttTtttttttttTtTtTt point 0 nongenic,nongenic -2902 upstream,2642 into {Y45G5AM.8},{Y45G5AM.2} 4062 CB6878_redo V 4248539 1 T G 15 1.00 63 24 0 4 4 @gggC point 0 nongenic,nongenic -6021 upstream,585 into {E03D2.4},{ZC142.1} 4063 CB6878_redo V 4321387 1 T A 43 1.00 63 4 2 4 6 @AAaa., point 0 nongenic,nongenic,nongenic -2060 upstream,-5728 upstream,954 into {ZC132.9},{D2063.1},{R02D1.1} 4064 CB6878_redo V 4329455 1 A C 247 1.00 63 62 0 14 14 @CCCCCCcCCcCCCC point 0 SNP none {haw75410} 4066 CB6878_redo V 4351933 1 T G 39 3.81 63 62 4 7 11 @GGGGGGG.,,. point 0 nongenic 2164 into {F32D1.3} 4067 CB6878_redo V 4447836 1 C G 212 1.56 63 62 0 14 14 @GGGGGGGGGGGggg point 0 nongenic,nongenic -4760 upstream,2706 into {Y47D7A.16},{Y47D7A.14} 4068 CB6878_redo V 4597289 1 A G 255 1.00 63 62 1 16 17 @ggGGGGgggGgGGG.gG point 0 SNP none {haw75689} 4070 CB6878_redo V 4727412 1 C T 45 1.00 63 40 9 13 22 @T,T.TT.TTt.,t.t,T,TTt. point 0 nongenic,nongenic,nongenic -4356 upstream,698 into,699 downstream {F39G3.3},{F39G3.8},{F39G3.4} 4071 CB6878_redo V 4727413 1 A T 41 1.00 63 44 9 12 21 @,T.TT.TTt.,t.t,T,TTt. point 0 nongenic,nongenic,nongenic -4355 upstream,699 into,700 downstream {F39G3.3},{F39G3.8},{F39G3.4} 4072 CB6878_redo V 4749749 1 T G 21 2.38 63 24 2 7 9 @CGGGGgG.. point 0 nongenic,nongenic -816 upstream,-830 upstream {C18G1.6.1},{C18G1.6.2} 162450 CB6878_redo V 4909260 77 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 403 to 480 bp into {H23N18.1} 4086 CB6878_redo V 5084723 1 A T 3 2.00 0 16 4 5 9 @,,,,TttTt point 0 nongenic,nongenic -3841 upstream,270 into {Y58A7A.3},{Y58A7A.4} 4087 CB6878_redo V 5084742 1 G A 6 2.00 0 22 6 15 21 @,AaaAa,AAa,aA,AAAA,A, point 0 missense CCG->CTG[Pro->Leu] {Y58A7A.4} 4088 CB6878_redo V 5084780 1 A G 103 2.00 63 62 9 18 27 @G,GGGG,G,,,,GgG.G,GGGG.GGGG point 0 silent GAT->GAC[Asp->Asp] {Y58A7A.4} 4089 CB6878_redo V 5084791 1 C A 119 2.00 63 62 9 14 23 @,,,AaA.A,AAAA.AAAA...AA point 0 missense GCA->TCA[Ala->Ser] {Y58A7A.4} 4091 CB6878_redo V 5124714 1 T A 255 1.00 63 62 0 24 24 @AAAaAaAGaAAaAaaaaAaaaGaa point 0 SNP none {haw76186} 4096 CB6878_redo V 5284688 1 T C 255 4.50 63 62 21 179 200 @CCCC,,..,.,C..,.C.C,CC,c..cCCCCCCcCC,CCCCccc,CCCCCCCC,CcccccccccccCCCCCCCCCCCCcccccccccccccccc.ccCC point 0 nongenic -6602 upstream {B0238.9} 4102 CB6878_redo V 5625703 1 C G 9 1.00 63 62 3 4 7 @ggGG,., point 0 missense TTG->TTC[Leu->Phe] {T01C2.1} 4116 CB6878_redo V 5692165 1 A C 13 1.00 63 62 14 17 31 @c,CC.,C.C,.C,c..cCcC,.cCC,c.C,C point 0 nongenic,nongenic,nongenic -465 upstream,-610 upstream,-7828 upstream {F25B4.8b},{F25B4.8a},{F25B4.9} 4117 CB6878_redo V 5755509 1 G T 64 1.00 63 62 2 5 7 @t..tttt point 0 missense CAG->AAG[Gln->Lys] {K09H11.11} 4125 CB6878_redo V 5845363 1 A C 7 1.00 63 22 1 3 4 @G,cC point 0 nongenic,nongenic,nongenic -902 upstream,340 into,342 into {F26F12.3c.1},{F26F12.3a.2,F26F12.3b},{F26F12.3a.1} 4126 CB6878_redo V 5869124 1 G A 178 1.00 63 62 6 17 23 @Aaaa,aaaaa,,AaA,a.AAA,A point 0 nongenic,nongenic -1188 upstream,-2942 upstream {F26F12.4},{C02G6.2} 4129 CB6878_redo V 6048318 1 C A 255 1.00 63 62 0 36 36 @AaAaAAaAaaAAAAaaAAAAAAaAAaaAaaAaaAAa point 0 SNP,three_prime_UTR none,none {haw77329},{R01B10.5.1} 4130 CB6878_redo V 6052074 1 T C 177 1.00 63 62 0 7 7 @CcCccCC point 0 SNP none {haw77333} 4155 CB6878_redo V 6089692 1 A T 13 6.00 0 12 0 5 5 @ttttt point 0 nongenic,nongenic -19640 upstream,-6318 upstream {Y38A10A.4},{Y38A10A.7} 4157 CB6878_redo V 6091304 1 T A 21 2.00 12 20 0 5 5 @AAAAA point 0 nongenic,nongenic -21252 upstream,-4706 upstream {Y38A10A.4},{Y38A10A.7} 4159 CB6878_redo V 6172858 1 T C 3 5.69 0 2 3 44 47 @C.CCC.CCCCCCcCcCCCCCCCCCcCccCCCCc,CCCCCCCCCcCCC point 0 silent CAA->CAG[Gln->Gln] {W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g} 4163 CB6878_redo V 6177079 1 C A 76 3.00 31 62 4 8 12 @aaaaaaaa,,,, point 0 silent GTG->GTT[Val->Val] {W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g} 4165 CB6878_redo V 6179156 1 A T 3 6.06 1 0 3 15 18 @TtTTTTT,tTTTT,TT.T point 0 missense CTT->CAT[Leu->His] {W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g} 4168 CB6878_redo V 6302463 1 A G 255 1.44 63 62 0 25 25 @GgGGggGGGGGGgGgggGgggggGg point 0 nongenic,nongenic -1318 upstream,-3026 upstream {K12B6.1},{K12B6.7} 162456 CB6878_redo V 6507842 52 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 893 to 945 bp into {Y40G12A.1} 4172 CB6878_redo V 6721122 1 C A 105 1.00 63 62 7 14 21 @AAaa.a,aAAAAAAA..,A,. point 0 nongenic,nongenic -2841 upstream,743 into {W02F12.7},{ZC487.2} 4175 CB6878_redo V 6873252 1 T C 50 1.00 63 32 2 5 7 @ccCcC,, point 0 nongenic,nongenic,nongenic,nongenic -18465 upstream,-8073 upstream,475 into,514 into {C55H1.2},{K11C4.3a},{T19F4.1a},{T19F4.1b} 4176 CB6878_redo V 6889636 1 C G 255 1.00 63 62 0 25 25 @gggggggGGGGgGgGGgGggggGgg point 0 silent GCC->GCG[Ala->Ala] {K11C4.3b} 4177 CB6878_redo V 6889637 1 G C 255 1.00 63 62 0 26 26 @cccccccCCCCcCcCCcCccccCccC point 0 missense GCA->CCA[Ala->Pro] {K11C4.3b} 4178 CB6878_redo V 6941077 1 G A 3 6.12 0 22 3 7 10 @AAAaA,A..a point 0 nongenic -5233 upstream {Y57E12B.3} 4179 CB6878_redo V 6941087 1 T G 5 9.56 0 26 3 10 13 @G,G..gGgggggG point 0 nongenic -5243 upstream {Y57E12B.3} 4180 CB6878_redo V 6941197 1 T C 3 6.31 0 2 16 24 40 @,C,.C...,,cC.,C,C..CCCCCCcc.CCCCc.,cCcCc point 0 nongenic -5353 upstream {Y57E12B.3} 4193 CB6878_redo V 6943105 1 T A 3 9.56 0 0 2 5 7 @A,aaaa. point 0 nongenic -7261 upstream {Y57E12B.3} 4197 CB6878_redo V 6956711 1 T C 255 1.00 63 62 0 16 16 @CcccCcCCCccccCcc point 0 five_prime_UTR,missense none,CTA->CCA[Leu->Pro] {T07H8.4f.2,T07H8.4f.3},{T07H8.4a,T07H8.4b,T07H8.4c,T07H8.4d.1,T07H8.4d.2,T07H8.4h.1,T07H8.4h.2,T07H8.4i,T07H8.4j} 4198 CB6878_redo V 6956743 1 C G 255 1.00 63 62 0 18 18 @GgggggggGGGgGgGggg point 0 five_prime_UTR,missense none,CGC->GGC[Arg->Gly] {T07H8.4f.1,T07H8.4f.2,T07H8.4f.3},{T07H8.4a,T07H8.4b,T07H8.4c,T07H8.4d.1,T07H8.4d.2,T07H8.4h.1,T07H8.4h.2,T07H8.4i,T07H8.4j} 4199 CB6878_redo V 6956744 1 G C 255 1.00 63 62 0 18 18 @CcccccccCCCcCcCccc point 0 five_prime_UTR,missense none,CGC->CCC[Arg->Pro] {T07H8.4f.1,T07H8.4f.2,T07H8.4f.3},{T07H8.4a,T07H8.4b,T07H8.4c,T07H8.4d.1,T07H8.4d.2,T07H8.4h.1,T07H8.4h.2,T07H8.4i,T07H8.4j} 4200 CB6878_redo V 7108979 1 G C 18 1.00 63 12 1 4 5 @,cCCC point 0 nongenic,nongenic,nongenic -260 upstream,2000 into,5439 into {T01C4.2a},{T01C4.2b},{T01C4.2c} 4207 CB6878_redo V 7245105 1 C G 255 1.00 63 62 0 34 34 @GGGgggGgGGGGGGGGgGGgGgGGggGgGGgGGG point 0 SNP none {haw78505} 4208 CB6878_redo V 7289805 1 C T 91 1.00 63 62 7 11 18 @t,T,T,t.,t.tTtTTT. point 0 silent ATC->ATT[Ile->Ile] {C13A2.1} 4210 CB6878_redo V 7386790 1 T C 36 1.00 63 0 0 4 4 @CCcc point 0 nongenic -690 upstream {C03G6.19} 4211 CB6878_redo V 7386791 1 C A 36 1.00 63 0 0 4 4 @AAaa point 0 nongenic -691 upstream {C03G6.19} 4212 CB6878_redo V 7403427 1 A G 255 1.00 63 62 0 42 42 @gGGgGGgggGGGggGgggGgGGGGGGGGggGGgGGGGggGGg point 0 silent,SNP GAA->GAG[Glu->Glu],none {R13D7.3},{uCE5-1535} 4213 CB6878_redo V 7546600 1 G A 255 1.00 63 62 0 25 25 @AaaAaAAAAAAAaaaaAAAaAAAAA point 0 missense,SNP CAC->TAC[His->Tyr],none {C54F6.14},{uCE5-1545} 4217 CB6878_redo V 7725862 1 G A 120 1.00 63 58 1 6 7 @AAAAaa. point 0 nongenic,nongenic,nongenic -1815 upstream,-2931 upstream,230 into {ZK105.6},{Y97E10C.1.1},{ZK105.8} 4218 CB6878_redo V 7860214 1 C A 233 3.69 63 62 0 16 16 @AAaaaagaaaAaaaAa point 0 nongenic,nongenic 323 downstream,510 downstream {C37C3.1a},{C37C3.1b} 4219 CB6878_redo V 7860248 1 A T 255 6.31 63 62 0 13 13 @TttttTtTttTtT point 0 nongenic,nongenic 357 downstream,544 downstream {C37C3.1a},{C37C3.1b} 4229 CB6878_redo V 7972534 1 T A 66 1.00 63 62 9 15 24 @A.a,AaA.AaAAa.A,a.A,,,aA point 0 nongenic,nongenic,nongenic -6724 upstream,369 downstream,821 downstream {F26D11.10},{F26D11.11a},{F26D11.11b} 4230 CB6878_redo V 7972659 1 T A 78 1.00 63 62 8 14 22 @a,.a,A.aaaaaAA,.aaa.a. point 0 nongenic,nongenic,nongenic -6849 upstream,244 downstream,696 downstream {F26D11.10},{F26D11.11a},{F26D11.11b} 4232 CB6878_redo V 8056170 1 G T 255 5.62 63 62 0 25 25 @ttttttttttTttTTtTttTttttt point 0 nongenic,nongenic -235 upstream,165 downstream {ZC513.1},{ZC513.2} 6251 CB6878_redo V 8063694 0 X X -1000 -999.99 -1000 -1000 1 1 2 @.aA indel 0 nongenic,nongenic -1539 upstream,-467 downstream {ZC513.9},{ZC513.10} 4233 CB6878_redo V 8226598 1 T A 31 1.00 63 62 2 6 8 @.aaaa.aa point 0 nongenic,nongenic 235 into,580 downstream {K07C11.10},{K07C11.1} 4246 CB6878_redo V 8533788 1 A C 15 1.50 63 32 2 3 5 @CcC.. point 0 nongenic,nongenic,nongenic -723 upstream,47 downstream,755 downstream {F45F2.12},{F45F2.4},{F45F2.13} 4247 CB6878_redo V 8540678 1 G A 42 1.00 63 62 16 19 35 @,,Aa,AA.,,,AA.A,.aaaAAA,a.,A.aaa.,a point 0 silent CAC->CAT[His->His] {F25G6.7a,F25G6.7b} 6255 CB6878_redo V 8757751 0 X X -1000 -999.99 -1000 -1000 3 -2 1 @,,,tT indel 0 nongenic -944 downstream {B0507.7} 4257 CB6878_redo V 9007892 1 T A 5 1.00 63 62 2 2 4 @aA,, point 0 nongenic,nongenic -1559 upstream,985 downstream {R03H4.2},{R03H4.3} 4258 CB6878_redo V 9113930 1 A G 29 1.00 63 38 2 3 5 @.,GGg point 0 nongenic,nongenic -9533 upstream,1165 into {F21C10.11a},{F21C10.7} 4259 CB6878_redo V 9162494 1 T G 255 1.75 63 62 0 30 30 @GGGggGGGgGGgggGGgggggggGGGGGGg point 0 missense CAA->CCA[Gln->Pro] {B0222.7} 4275 CB6878_redo V 9376379 1 G T 255 1.00 63 62 0 31 31 @TTtTttTTtTTttTTTttttTTTttTTttTt point 0 missense,SNP CAA->AAA[Gln->Lys],none {E02C12.10},{haw80948} 4280 CB6878_redo V 9556385 1 T C 215 1.38 63 62 6 24 30 @CcCccCcCCC.Cc,Cc,cCcccCc,Cc.,C point 0 nongenic,nongenic 303 downstream,382 downstream {F25B3.3},{F25B3.1} 4283 CB6878_redo V 9603657 1 G T 65 7.19 59 62 0 6 6 @TtttTc point 0 nongenic,nongenic -4877 upstream,-6117 upstream {K09G1.4a,K09G1.4b},{K09G1.3} 4284 CB6878_redo V 9603798 1 A G 53 2.38 52 48 2 6 8 @g,GG,GGg point 0 nongenic,nongenic -4736 upstream,-6258 upstream {K09G1.4a,K09G1.4b},{K09G1.3} 4286 CB6878_redo V 9662867 1 T C 188 1.00 63 62 0 14 14 @CCCCCCCCCCCCCC point 0 nongenic,nongenic -1279 upstream,-3805 upstream {B0331.2},{ZK287.1} 4289 CB6878_redo V 9663159 1 T G 255 1.00 63 62 0 25 25 @gGgGGggGGGGGGgGGGgGgGgggg point 0 SNP none {haw81125} 4291 CB6878_redo V 9707449 1 T C 145 1.00 63 62 0 6 6 @CcCCCC point 0 SNP none {haw81144} 4292 CB6878_redo V 9750975 1 C A 49 1.00 63 62 2 5 7 @..AaAaA point 0 nongenic -595 upstream {F58E6.4} 4293 CB6878_redo V 9798856 1 A C 53 1.00 63 62 9 14 23 @cCccC.c.CcC.C,C,,cc,.,C point 0 SNP none {haw81158} 4296 CB6878_redo V 9927293 1 T A 255 1.00 63 62 0 31 31 @aAaaaaaAaaaAaAAAAAaaaAaaAAAaaAa point 0 SNP none {haw81196} 4297 CB6878_redo V 9928614 1 C T 255 1.00 63 62 0 23 23 @TttTTTtTTTTTTTTTTTTtTtT point 0 silent,SNP CAG->CAA[Gln->Gln],none {T07C12.12},{haw81197} 4299 CB6878_redo V 10044260 1 C A 255 1.00 63 62 0 37 37 @AAaaAAAAaAaAaaAaaAaAAAaAAAAAaAAaaAaAa point 0 nongenic,nongenic,nongenic -7874 upstream,3497 into,612 into {T06E8.2},{F57A8.1.1},{F57A8.1.2} 4300 CB6878_redo V 10067797 1 A C 3 1.00 63 62 2 2 4 @..cC point 0 nongenic 739 into {F57A8.4} 4301 CB6878_redo V 10229994 1 T C 255 2.88 63 62 0 41 41 @CccCCcCcCcccCCCcCCCccCccCCcCCcCccCcCccccC point 0 silent TAT->TAC[Tyr->Tyr] {C12D8.16} 4305 CB6878_redo V 10269855 1 C G 3 4.50 63 2 1 3 4 @G.gg point 0 nongenic,nongenic,nongenic -7220 upstream,-7942 upstream,431 into {Y22F5A.3b},{Y22F5A.4.1},{Y22F5A.3a} 4306 CB6878_redo V 10269857 1 C G 23 4.50 63 2 0 4 4 @Gggg point 0 nongenic,nongenic,nongenic -7222 upstream,-7940 upstream,429 into {Y22F5A.3b},{Y22F5A.4.1},{Y22F5A.3a} 4307 CB6878_redo V 10336188 1 A G 37 1.38 63 62 3 5 8 @.,.GGgGG point 0 nongenic,nongenic,nongenic -3284 upstream,-4104 upstream,751 into {K07C5.2},{B0024.14b},{K07C5.1} 4308 CB6878_redo V 10397712 1 C A 255 1.00 63 62 0 28 28 @aaAaAAAaaaAAaAaaAAAAAAaAAAAa point 0 SNP none {haw81401} 4309 CB6878_redo V 10444115 1 A T 240 1.00 63 62 0 10 10 @ttttTTTTtT point 0 SNP none {haw81421} 4315 CB6878_redo V 10463850 1 A C 255 1.00 63 62 0 30 30 @CcccCCCCCcCcCcCCCcCccCcCCcCccc point 0 missense ACT->CCT[Thr->Pro] {F22E12.2} 4317 CB6878_redo V 10598995 1 C T 93 1.00 63 62 0 4 4 @TTTT point 0 nongenic,nongenic -84 upstream,355 downstream {T21C9.12},{T21C9.13} 4321 CB6878_redo V 10621928 1 C A 255 1.00 63 62 0 28 28 @aAaaaaAaAAAaAaaAaaAaAAaAAAaA point 0 SNP none {haw81482} 4322 CB6878_redo V 10696346 1 A T 76 1.00 63 62 0 4 4 @cttt point 0 nongenic -6178 upstream {C05A2.1} 4323 CB6878_redo V 10775692 1 G A 255 1.00 63 62 0 35 35 @aaaaaAAAaAaaAAAAaAaAaAaaaaaaAAaaaaA point 0 missense CCG->TCG[Pro->Ser] {D1054.5} 4324 CB6878_redo V 10866472 1 G A 69 1.75 63 62 19 20 39 @,,,aaa,Aaa,aaA,,,A,,,.a,,a,a.AaAa,A,A,A point 0 nongenic,nongenic -14381 upstream,-702 upstream {F32D8.1},{F53H10.2a} 4325 CB6878_redo V 10893331 1 A C 255 1.00 63 62 0 32 32 @ccCcCCcCcCccccCCcCCcCCCcCccCCCCc point 0 SNP none {haw81672} 4326 CB6878_redo V 11012493 1 C G 66 1.00 63 62 1 3 4 @ggG. point 0 nongenic -52 upstream {C13G3.1} 4330 CB6878_redo V 11180409 1 G A 255 1.00 63 62 0 12 12 @AaaAaaAAaAaa point 0 SNP none {haw81856} 4331 CB6878_redo V 11434982 1 T G 255 1.00 63 62 0 31 31 @gggGgGgGGGGGgGggGgggGGggGgGGggG point 0 nongenic,nongenic -11195 upstream,-3765 upstream {T26H10.2},{F57B7.1a,F57B7.1b} 4336 CB6878_redo V 11542398 1 G C 3 4.00 63 2 2 7 9 @CCCCCC.c. point 0 nongenic -1514 upstream {F38B7.2b} 4338 CB6878_redo V 11687322 1 C T 255 1.00 63 62 0 18 18 @TttTTTTTtTTTTTtttt point 0 SNP none {haw82144} 4339 CB6878_redo V 11782174 1 A G 3 1.00 63 62 2 3 5 @..ggG point 0 nongenic,nongenic,nongenic 1073 into,384 into,745 into {F55A11.6a},{F55A11.11},{F55A11.6b} 4341 CB6878_redo V 11883417 1 A G 255 1.00 63 62 0 25 25 @gGGgGGGGGgGgggGgGggGgGGGg point 0 SNP none {haw82276} 4342 CB6878_redo V 11951970 1 A G 255 1.00 63 62 0 24 24 @GgGGgGgGGGGGGGGGGgGggGGg point 0 nongenic -6398 upstream {F58H1.5.1} 6268 CB6878_redo V 12166926 0 X X -1000 -999.99 -1000 -1000 1 1 2 @,CC indel 0 nongenic,nongenic -242 downstream,285 downstream {ZK863.2},{VC27A7L.1} 4353 CB6878_redo V 12579466 1 G T 255 1.00 63 62 0 27 27 @TTTTTTtTTtTtTTttTtttTtTtttT point 0 SNP none {haw83048} 4355 CB6878_redo V 12864064 1 A T 255 1.50 63 62 0 25 25 @tTTtTTTTttttTTTTtTTTTtTtt point 0 nongenic,nongenic,nongenic,nongenic -1829 upstream,251 downstream,300 into,558 downstream {T07F10.5},{T07F10.1a},{T07F10.6},{T07F10.1b} 4356 CB6878_redo V 12864636 1 A G 51 1.44 63 62 4 10 14 @..G.G.GGGGGGGG point 0 nongenic,nongenic,nongenic -1257 upstream,823 downstream,872 into {T07F10.5},{T07F10.1a},{T07F10.6} 4357 CB6878_redo V 12864640 1 C G 118 1.31 63 62 2 15 17 @G.G.GGGGGGGGGGGGG point 0 nongenic,nongenic,nongenic -1253 upstream,827 downstream,876 into {T07F10.5},{T07F10.1a},{T07F10.6} 4359 CB6878_redo V 12915568 1 A T 255 1.00 63 62 0 40 40 @TttttTttTtttTTTtttTtTtttTtttTtTTTttTtTtT point 0 SNP none {haw83378} 4360 CB6878_redo V 12919477 1 A G 255 1.00 63 62 0 17 17 @gggggggGGggGgGGgg point 0 SNP none {haw83380} 6272 CB6878_redo V 13150206 0 X X -1000 -999.99 -1000 -1000 4 1 5 @....aA indel 0 inframe none {B0365.7} 4361 CB6878_redo V 13162704 1 G A 27 1.00 63 6 3 5 8 @,..aaaAA point 0 nongenic,nongenic,nongenic,nongenic,nongenic -4813 upstream,1238 into,3153 into,6057 into,7400 into {T09E8.1e},{T09E8.1a},{T09E8.1b},{T09E8.1f},{T09E8.1c} 4365 CB6878_redo V 13466076 1 G A 255 1.00 63 62 0 14 14 @AaAaAAaAAAAaAA point 0 SNP none {haw83625} 4366 CB6878_redo V 13506487 1 C T 38 1.00 63 4 2 3 5 @.,TtT point 0 nongenic,nongenic,nongenic -3761 upstream,281 into,5214 into {R11G10.1b.1},{R11G10.4},{R11G10.1a} 4370 CB6878_redo V 13526015 1 T G 3 9.06 63 2 3 8 11 @GGGGG.GGG., point 0 nongenic,nongenic -10816 upstream,2504 into {R11G10.2},{R11G10.3} 4371 CB6878_redo V 13539850 1 G T 111 1.00 63 62 0 4 4 @TtTt point 0 SNP none {haw83676} 4392 CB6878_redo V 13645955 1 T C 203 1.00 63 62 1 12 13 @ccccCcccCCC,c point 0 SNP none {haw83752} 4393 CB6878_redo V 13646003 1 A C 65 1.44 63 62 10 11 21 @.C..cC.,,C,c.Ccc..CcC point 0 nongenic,nongenic -11799 upstream,863 downstream {H37A05.2},{H37A05.4} 4394 CB6878_redo V 13647868 1 A G 45 1.25 63 24 0 4 4 @gggg point 0 nongenic,nongenic -13664 upstream,513 into {H37A05.2},{H37A05.4} 4396 CB6878_redo V 13717171 1 T C 255 1.00 63 62 0 19 19 @CCCCCCCcccCcCccccCc point 0 SNP none {haw83786} 4399 CB6878_redo V 13886659 1 T C 255 1.00 63 62 0 23 23 @cCCCCcCCCccccccCcccCCcc point 0 SNP none {haw83916} 4400 CB6878_redo V 13888688 1 A G 255 1.00 63 62 0 21 21 @ggGggggggggggGGGGgGGG point 0 SNP none {haw83918} 4401 CB6878_redo V 13931064 1 A T 255 1.00 63 62 0 33 33 @TttTTttttTtTTTttttTtTTTtTtttTTTtT point 0 missense,SNP TTA->TTT[Leu->Phe],none {C06B3.14},{haw83931} 4402 CB6878_redo V 13981688 1 G A 71 1.00 63 62 8 28 36 @AAAAAAAAAAAAAA.AA.A.AAAA.A.A.AA.A.AA point 0 silent GTC->GTT[Val->Val] {T26F2.2} 4415 CB6878_redo V 14486410 1 A T 255 1.00 63 62 0 20 20 @TTtTttTTTTTttTTtttTt point 0 SNP none {haw84369,snp_R02D5[2]} 4420 CB6878_redo V 14590348 1 A T 4 8.06 0 26 3 9 12 @t,tTTtTt,tt. point 0 nongenic -4932 upstream {Y40H4A.2} 4429 CB6878_redo V 14733448 1 G C 255 1.00 63 62 0 25 25 @cCCcCCCcccCCccCcCccccccCc point 0 missense CTT->GTT[Leu->Val] {Y50E8A.4a,Y50E8A.4b,Y50E8A.4c} 4430 CB6878_redo V 14743838 1 T C 255 1.31 63 62 0 21 21 @cccCCCCCCcccCCcCccCcc point 0 nongenic -2532 upstream {Y50E8A.6} 4440 CB6878_redo V 14744337 1 G C 132 2.19 34 62 0 20 20 @cccCccCCccCcCCcCCccC point 0 nongenic -3031 upstream {Y50E8A.6} 4442 CB6878_redo V 14744895 1 T A 160 1.00 63 62 1 13 14 @.AAAAAAAAAAAAA point 0 nongenic,nongenic -3589 upstream,767 downstream {Y50E8A.6},{Y50E8A.7} 6277 CB6878_redo V 14755431 1 X X -1000 -999.99 -1000 -1000 11 -1 10 @,,,,,C,,C,,,CC, indel -1 nongenic,nongenic -17904 upstream,-4994 upstream {Y50E8A.16},{Y50E8A.17} 4490 CB6878_redo V 14938747 1 T C 24 1.00 63 62 2 3 5 @CCC.. point 0 silent TTA->CTA[Leu->Leu] {C30G7.2} 4491 CB6878_redo V 15100772 1 G A 255 1.00 63 62 0 28 28 @aAAAaAAaAaaaaaaAAAaaaaaAaAAa point 0 silent GTG->GTA[Val->Val] {C01G10.1} 4494 CB6878_redo V 15361002 1 C A 255 1.00 63 62 0 15 15 @AAAAAAAAAaaaAAa point 0 nongenic -286 upstream {C29F3.1} 4495 CB6878_redo V 15403296 1 G A 255 1.00 63 62 0 22 22 @aAAaAAaAaAAAAAaAAaAAAa point 0 nongenic,nongenic -1839 upstream,62 downstream {T06E6.7},{T06E6.5} 4496 CB6878_redo V 15434045 1 G A 114 1.50 63 62 20 46 66 @,.aA.,AAAa.aAa.AA.a..AAaa,a,A.aAa.A,.aa.a.aAa.aaaAaaAaa.AaaAAaaA,a point 0 nongenic -1501 upstream {T26H5.8} 4497 CB6878_redo V 15434980 1 G C 68 1.00 63 62 26 40 66 @CCCCCcc..c,CCCCcccc...,CcC.C.c.,c.c.C,Cc.CCC.c.c.c.,.cccC,,.,ccc.c point 0 SNP none {haw85321} 4498 CB6878_redo V 15435294 1 C A 11 1.00 63 62 29 33 62 @,..,aaAaaAaaa.a.,,.A,A.a.aa,AaaaAaa.,...,,,.aAaAAa...Aa,A.,AA. point 0 SNP none {haw85323} 4499 CB6878_redo V 15479200 1 C A 255 1.00 63 62 0 25 25 @AAAAAaAAAAAaaAAaaAaaAaaaA point 0 SNP none {haw85361} 6280 CB6878_redo V 15527876 0 X X -1000 -999.99 -1000 -1000 1 1 2 @.gg indel 0 nongenic,nongenic -1468 upstream,-5879 upstream {F21A3.1},{F21A3.8} 4500 CB6878_redo V 15581676 1 T C 255 1.69 63 62 0 21 21 @ccccccCcccCCcCCCccCCC point 0 nongenic,nongenic -3995 upstream,-854 upstream {B0391.10},{F28F8.7} 4501 CB6878_redo V 15581801 1 T C 126 1.19 63 62 0 6 6 @ccccCc point 0 nongenic,nongenic -3870 upstream,-979 upstream {B0391.10},{F28F8.7} 4505 CB6878_redo V 15669766 1 A C 255 1.00 63 62 0 20 20 @cccccCCccccCcCcccccc point 0 missense ATT->CTT[Ile->Leu] {K06B4.4} 4506 CB6878_redo V 15669777 1 C A 255 1.00 63 62 0 20 20 @aaAaAaaaaaaAAaaaaaAa point 0 missense AAC->AAA[Asn->Lys] {K06B4.4} 4507 CB6878_redo V 15669780 1 C T 255 1.00 63 62 0 21 21 @TtTttttttTTtttttTtTTT point 0 silent GTC->GTT[Val->Val] {K06B4.4} 4508 CB6878_redo V 15935382 1 T A 62 1.00 63 62 2 4 6 @,,aAAa point 0 nongenic -2916 upstream {T05G11.3} 4511 CB6878_redo V 16365722 1 T A 182 1.00 63 62 0 12 12 @AAAAAAAAAAaa point 0 nongenic,nongenic -1932 upstream,852 into {W08G11.3a},{W08G11.4} 4513 CB6878_redo V 16420522 1 G A 255 1.00 63 62 1 36 37 @AaaaAaAAaaAAaAAAaaaaAAAAAAaAAaAAAA.Aa point 0 SNP none {haw88457} 6283 CB6878_redo V 16460134 1 X X -1000 -999.99 -1000 -1000 4 -3 1 @.,.. indel -1 SNP none {uCE5-2399} 4522 CB6878_redo V 16527371 1 T A 23 1.00 63 54 6 7 13 @AAAaaaa,.,,,. point 0 nongenic,nongenic,nongenic -3974 upstream,-5127 upstream,241 into {F36D3.10},{F36D3.13},{F36D3.8} 4527 CB6878_redo V 16590975 1 C G 22 1.00 63 0 2 2 4 @.,gg point 0 nongenic,nongenic -2473 upstream,902 into {T03E6.6},{T03E6.5} 4528 CB6878_redo V 16707264 1 A G 5 7.88 0 20 9 10 19 @,,.,,,,,,GGGgggGggg point 0 nongenic -644 upstream {Y70C5C.2} 4544 CB6878_redo V 16723977 1 T C 255 1.00 63 62 0 23 23 @CCCCccccCCCccCcccCcCCcc point 0 nongenic,nongenic -160 upstream,-3209 upstream {Y70C5C.6a,Y70C5C.6b},{T25E12.14} 4545 CB6878_redo V 16723993 1 G C 255 1.00 63 62 0 29 29 @CccccCCCccCcccCcCCccCCCCcCCCC point 0 nongenic,nongenic -176 upstream,-3193 upstream {Y70C5C.6a,Y70C5C.6b},{T25E12.14} 4546 CB6878_redo V 16733914 1 A C 255 1.00 63 62 0 18 18 @ccCCCCCCCCCCcCCCCC point 0 missense,SNP TTT->GTT[Phe->Val],none {T25E12.10},{haw89342,snp_T25E12[1]} 4547 CB6878_redo V 16758355 1 A T 147 1.00 63 62 0 5 5 @TttTT point 0 SNP none {haw89380} 4548 CB6878_redo V 16816476 1 T C 255 1.00 63 62 0 30 30 @CcCccCcCcCcCCCCCCcCCCCcCCCccCC point 0 nongenic 938 into {T20B3.1} 4549 CB6878_redo V 16874737 1 C G 36 1.00 63 10 4 6 10 @gGGggG,... point 0 nongenic,nongenic,nongenic -1110 upstream,-3277 upstream,690 into {F49A5.10},{F49A5.6},{F49A5.8} 4556 CB6878_redo V 16982761 1 A T 95 2.88 63 62 0 8 8 @TTTTtttt point 0 nongenic 910 downstream {Y102A5C.25} 4559 CB6878_redo V 17040210 1 T C 70 8.75 63 60 0 4 4 @CCCC point 0 nongenic,nongenic -2351 upstream,-4289 upstream {F28B1.1},{F49H6.11} 4561 CB6878_redo V 17087744 1 C G 3 2.69 63 0 5 7 12 @GGGGGGG,,... point 0 nongenic,nongenic,nongenic,nongenic -4795 upstream,-4955 upstream,1671 into,2250 into {ZK218.1},{T05E12.9},{T05E12.6a},{T05E12.6b} 4565 CB6878_redo V 17157709 1 T G 3 2.62 63 4 1 4 5 @GGGG. point 0 nongenic,nongenic -2134 upstream,-484 upstream {F40D4.12},{F40D4.13} 4572 CB6878_redo V 17378169 1 G A 255 1.12 63 62 0 23 23 @AAAaAaAaaAaaAaaaAaaAaaa point 0 SNP none {haw90646} 4577 CB6878_redo V 17512486 1 T C 255 1.31 63 62 0 17 17 @cCCcCccCcCCCCCCCC point 0 nongenic -8643 upstream {C18D4.2a} 4578 CB6878_redo V 17619073 1 C G 255 1.12 63 62 0 27 27 @GGGGgGggGGGggGggGGggGgGggGg point 0 nongenic,nongenic -1088 upstream,-2183 upstream {Y6G8.8},{Y6G8.6} 4580 CB6878_redo V 17652364 1 A G 15 1.69 12 10 0 5 5 @GGGgG point 0 nongenic -1873 upstream {F57G4.8} 4582 CB6878_redo V 17738078 1 A C 15 8.00 0 14 0 5 5 @CcCCC point 0 nongenic,nongenic -7728 upstream,1783 into {W06D12.2},{W06D12.1} 4586 CB6878_redo V 17738238 1 T C 94 8.69 26 62 0 10 10 @CCCCCcCcCC point 0 nongenic,nongenic -7888 upstream,1623 into {W06D12.2},{W06D12.1} 4587 CB6878_redo V 17835640 1 G T 255 1.00 63 62 0 37 37 @TTtttTTtttttTTtTtTTttTTttttTttttttttT point 0 SNP none {haw91665} 4588 CB6878_redo V 17867118 1 T G 193 1.62 63 62 0 10 10 @ggGgggGGgg point 0 nongenic,nongenic,nongenic -11158 upstream,-4254 upstream,3502 into {Y59A8A.3.1},{Y59A8A.2},{Y59A8A.1} 4593 CB6878_redo V 17867621 1 T C 71 1.56 34 62 3 4 7 @...cccc point 0 nongenic,nongenic,nongenic -11661 upstream,-3751 upstream,2999 into {Y59A8A.3.1},{Y59A8A.2},{Y59A8A.1} 4594 CB6878_redo V 17867627 1 A T 105 1.44 34 62 3 6 9 @...tttttt point 0 nongenic,nongenic,nongenic -11667 upstream,-3745 upstream,2993 into {Y59A8A.3.1},{Y59A8A.2},{Y59A8A.1} 4595 CB6878_redo V 17871324 1 T G 234 1.00 63 62 0 10 10 @GgGgggGggg point 0 nongenic,nongenic -48 upstream,-704 upstream {Y59A8A.2},{Y59A8A.1} 162468 CB6878_redo V 17886005 57 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2891 to 2948 bp into {C06H5.6} 4602 CB6878_redo V 17898272 1 G A 255 4.25 63 62 0 30 30 @AAaAAAaAAAAAaAAaAaAaaAaAAaaaAA point 0 nongenic,nongenic -1517 upstream,-1523 upstream {C06H5.1},{C06H5.2} 4605 CB6878_redo V 17950254 1 T A 180 1.00 63 62 0 10 10 @AaAAAaAAAA point 0 SNP none {haw91922} 4613 CB6878_redo V 17961088 1 T A 166 4.12 63 62 0 9 9 @aaAaaAAAA point 0 nongenic 5728 into {Y59A8B.23a,Y59A8B.23b} 4616 CB6878_redo V 17972070 1 G T 255 1.25 63 62 0 20 20 @TTtTTtTtttttTTTttTtT point 0 nongenic,nongenic,nongenic,nongenic -14154 upstream,-5254 upstream,3512 into,3570 into {Y59A8B.21},{Y59A8B.23a,Y59A8B.23b},{Y59A8B.22.1},{Y59A8B.22.2} 4617 CB6878_redo V 17972080 1 G T 255 1.19 63 62 1 21 22 @TTtTTt,tttttTTTttTtTTT point 0 nongenic,nongenic,nongenic,nongenic -14144 upstream,-5264 upstream,3522 into,3580 into {Y59A8B.21},{Y59A8B.23a,Y59A8B.23b},{Y59A8B.22.1},{Y59A8B.22.2} 6286 CB6878_redo V 17989160 1 X X -1000 -999.99 -1000 -1000 4 -2 2 @,,.. indel -1 SNP none {uCE5-2743} 4618 CB6878_redo V 18022415 1 G A 255 1.00 63 62 0 19 19 @aaAaaaaAAaaaAaaaAaA point 0 nongenic,nongenic,nongenic -27 upstream,-29 upstream,-5122 upstream {Y59A8B.6.1},{Y59A8B.6.2},{Y59A8B.4} 4624 CB6878_redo V 18150433 1 C G 255 1.00 63 62 0 28 28 @gGgggggGgGgGgGgggGgGGgggGggg point 0 missense CCG->GCG[Pro->Ala] {C14A6.2} 6287 CB6878_redo V 18211053 0 X X -1000 -999.99 -1000 -1000 6 -1 5 @,.,,,,TTt indel 1 nongenic -2001 upstream {F16H6.7} 4625 CB6878_redo V 18211054 1 G A 83 5.00 63 62 0 9 9 @AaAAAAAAa point 0 nongenic -2002 upstream {F16H6.7} 4648 CB6878_redo V 18546600 1 G C 3 3.00 0 4 3 4 7 @C.,CCC, point 0 nongenic,nongenic 2392 into,2410 into {Y51A2D.7b},{Y51A2D.7a} 4649 CB6878_redo V 18656480 1 T C 255 1.00 63 62 0 25 25 @CCCCCCcCccCCccccCCCCcCccc point 0 nongenic,nongenic,nongenic 324 into,348 downstream,408 into {Y69H2.3c},{Y69H2.12},{Y69H2.3b} 4659 CB6878_redo V 18683437 1 G T 69 7.00 63 62 0 4 4 @TTTt point 0 nongenic 890 into {Y69H2.10b} 4665 CB6878_redo V 18858714 1 C T 152 1.00 63 62 0 8 8 @tttttttt point 0 SNP none {haw93705} 4671 CB6878_redo V 18959114 1 A G 186 4.12 50 62 0 10 10 @Gggggggggg point 0 nongenic,nongenic -1842 upstream,910 into {Y80D3A.9},{Y39B6A.46} 4672 CB6878_redo V 18959149 1 A G 127 7.88 50 62 0 7 7 @GgGgggg point 0 nongenic,nongenic -1877 upstream,945 into {Y80D3A.9},{Y39B6A.46} 4673 CB6878_redo V 18959246 1 A T 80 4.56 63 62 2 12 14 @T,TTT,TTTTTTtT point 0 nongenic,nongenic -1974 upstream,892 into {Y80D3A.9},{Y39B6A.46} 4674 CB6878_redo V 18959249 1 T C 100 4.25 63 62 1 8 9 @,CCCCCCcC point 0 nongenic,nongenic -1977 upstream,889 into {Y80D3A.9},{Y39B6A.46} 4675 CB6878_redo V 18959251 1 A G 100 4.25 63 62 1 8 9 @,GGGGGGgG point 0 nongenic,nongenic -1979 upstream,887 into {Y80D3A.9},{Y39B6A.46} 4676 CB6878_redo V 18962810 1 C T 119 1.00 63 62 0 4 4 @TTtT point 0 nongenic,nongenic -2672 upstream,1745 into {Y39B6A.46},{Y39B6A.43a,Y39B6A.43b} 4678 CB6878_redo V 18965154 1 T A 172 1.00 63 62 0 7 7 @aaAaaaa point 0 SNP none {haw94014} 4679 CB6878_redo V 18980199 1 A T 49 8.31 19 48 0 7 7 @TTTTttT point 0 nongenic,nongenic,nongenic -1084 upstream,-2255 upstream,853 into {Y39B6A.39},{Y39B6A.41},{Y39B6A.40} 4682 CB6878_redo V 19052087 1 T C 255 1.00 63 62 0 17 17 @CccCCcccccccCcccC point 0 SNP none {haw94226} 4698 CB6878_redo V 19187353 1 T C 255 1.00 63 62 0 24 24 @CCCcCCcCccccCcccCcccccCc point 0 nongenic 512 into {Y39B6A.48} 4702 CB6878_redo V 19444041 1 G C 21 1.00 63 50 1 5 6 @C,cccN point 0 nongenic,nongenic,nongenic,nongenic -455 upstream,1493 into,357 into,77 downstream {M04C3.1a},{M04C3.1b.1},{M04C3.1b.2},{M04C3.3} 4703 CB6878_redo V 19485465 1 C G 62 1.00 63 36 1 4 5 @.GggG point 0 nongenic -488 upstream {Y43F8B.18} 4704 CB6878_redo V 19499424 1 G C 129 1.00 63 62 0 7 7 @cCcCccc point 0 nongenic,nongenic -3651 upstream,-3772 upstream {Y43F8B.3a,Y43F8B.3b},{Y43F8B.5} 4705 CB6878_redo V 19506793 1 T A 255 1.00 63 62 0 14 14 @AaAaAAAAAAAaaA point 0 nongenic,nongenic -11141 upstream,3718 into {Y43F8B.5},{Y43F8B.3a,Y43F8B.3b} 4720 CB6878_redo V 19816962 1 C T 255 1.06 63 62 0 11 11 @ttTttTtTTTT point 0 SNP none {haw96009} 4723 CB6878_redo V 19828951 1 T C 255 1.00 63 62 0 40 40 @CCCCCCCccCcCccCccccCCccccCccCcccCCccCcCC point 0 silent CAA->CAG[Gln->Gln] {Y116F11B.3.1,Y116F11B.3.2} 4724 CB6878_redo V 19862667 1 A C 186 1.00 63 62 0 9 9 @ccccCcccc point 0 ncRNA,SNP none,none {Y116F11B.9b},{haw96106} 4728 CB6878_redo V 19868214 1 C G 235 1.00 63 62 0 11 11 @gGgGGGgGGGG point 0 nongenic,nongenic -267 upstream,-9969 upstream {Y116F11B.9a},{Y116F11B.11} 4732 CB6878_redo V 19986509 1 C G 11 1.00 63 12 1 6 7 @GGGG.Gg point 0 nongenic,nongenic -1437 upstream,-2964 upstream {Y60A3A.22},{Y60A3A.2} 4736 CB6878_redo V 20072235 1 T C 17 1.00 63 62 3 7 10 @CCCCCC.C,. point 0 nongenic -8097 upstream {Y113G7A.6a,Y113G7A.6b} 162472 CB6878_redo V 20083776 84 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered non-exonic, 3827 to 3911 bp into,non-exonic, 3837 to 3921 bp into {Y113G7A.8.1},{Y113G7A.8.2} 4737 CB6878_redo V 20328260 1 G A 102 1.00 63 62 0 4 4 @aaAA point 0 nongenic 240 downstream {Y38H6A.1} 4738 CB6878_redo V 20328261 1 A T 71 1.00 63 24 1 4 5 @ttTT, point 0 nongenic 241 downstream {Y38H6A.1} 4739 CB6878_redo V 20337877 1 C T 255 1.00 63 62 0 14 14 @tTTttTTTTTTTtt point 0 SNP none {haw97199} 4741 CB6878_redo V 20361172 1 T C 255 1.00 63 62 0 37 37 @CcCcCCcCcCcCCcCCccccCCcccccCcCccccccC point 0 missense TCG->CCG[Ser->Pro] {K02E2.2} 4747 CB6878_redo V 20508851 1 C A 255 1.00 63 62 0 32 32 @AAAAaAaAaaAaaaaaaAaaAaaaaaAAaAAa point 0 nongenic,nongenic,nongenic -3790 upstream,-5877 upstream,1120 into {Y38H6C.4},{Y38H6C.8},{Y38H6C.5} 4748 CB6878_redo V 20550701 1 C T 255 1.00 63 62 0 31 31 @tttttTtTttTTTtttTtTttttttTTttTt point 0 nongenic,nongenic -3589 upstream,427 into {Y38H6C.18},{Y38H6C.20} 4757 CB6878_redo V 20756343 1 C A 102 1.00 63 58 0 4 4 @aaaa point 0 nongenic,nongenic,nongenic,nongenic -12039 upstream,-529 upstream,1041 into,3445 into {W07A8.3.1},{F38A6.1c},{F38A6.1b},{F38A6.1a} 4758 CB6878_redo V 20775929 1 A T 26 1.00 63 62 2 3 5 @tTT., point 0 nongenic,nongenic -4446 upstream,-608 upstream {F38A6.3a,F38A6.3b,F38A6.3d},{F38A6.4} 4765 CB6878_redo X 76629 1 A T 22 2.12 63 18 3 5 8 @TTTTT.,. point 0 nongenic -1799 upstream {Y73B3A.16} 4769 CB6878_redo X 91173 1 G A 255 1.19 63 62 0 36 36 @AAAAAAAAAAAaAAaaAAAaaAAAAAAAAaAaAaaA point 0 missense CCG->TCG[Pro->Ser] {Y73B3A.3} 4771 CB6878_redo X 106701 1 A G 76 3.56 30 62 3 8 11 @g...TGGGGGG point 0 nongenic,nongenic -1938 upstream,269 downstream {Y73B3A.4},{Y73B3A.5} 4773 CB6878_redo X 161175 1 G T 255 3.12 63 62 0 17 17 @tttTtttttTTTTtttt point 0 nongenic -3814 upstream {Y73B3A.10} 4775 CB6878_redo X 187274 1 C G 238 1.00 63 62 0 10 10 @gggGGggGGg point 0 SNP none {haw98538} 4776 CB6878_redo X 208717 1 G A 255 1.44 63 62 0 17 17 @aAAAAAaaaaaaAaaaA point 0 nongenic 390 downstream {Y73B3B.1} 4780 CB6878_redo X 275068 1 G T 3 2.00 0 22 13 14 27 @T.T.,T.T.,,T.ttT.,..Tt,TTTt point 0 nongenic,nongenic -1055 upstream,571 into {Y108F1.5},{Y108F1.1} 4781 CB6878_redo X 289841 1 G C 189 1.00 63 62 0 10 10 @cccccccCcC point 0 nongenic,nongenic -3316 upstream,-7406 upstream {Y47C4A.1},{R57.2} 4782 CB6878_redo X 289852 1 G C 230 5.25 63 62 0 15 15 @cccccCcCCcCccCc point 0 nongenic,nongenic -3327 upstream,-7395 upstream {Y47C4A.1},{R57.2} 4786 CB6878_redo X 299633 1 T A 255 1.00 63 62 0 21 21 @aaaaaAAaAAAaAaaAaAAAa point 0 SNP none {haw98564} 4789 CB6878_redo X 331746 1 A C 3 2.00 63 12 1 4 5 @CCC.C point 0 nongenic,nongenic 1966 into,2842 into {M02E1.1b.1},{M02E1.1a,M02E1.1b.2} 4791 CB6878_redo X 338680 1 T A 31 1.00 63 0 0 4 4 @AAAA point 0 nongenic 2553 into {C04E7.4} 4792 CB6878_redo X 341454 1 G C 255 1.00 63 62 0 22 22 @CCcccCccccCcccCccccCcc point 0 nongenic -221 upstream {C04E7.4} 4793 CB6878_redo X 346995 1 G T 155 1.00 63 62 0 6 6 @tttttT point 0 nongenic,nongenic -6624 upstream,-705 upstream {C04E7.2},{C04E7.3} 4794 CB6878_redo X 347000 1 G T 135 1.00 63 62 0 5 5 @ttttT point 0 nongenic,nongenic -6619 upstream,-710 upstream {C04E7.2},{C04E7.3} 4804 CB6878_redo X 348115 1 C A 255 1.00 63 62 0 30 30 @AaAAaAAaAaAAAaaaaAaAAaaAAAaaaa point 0 SNP none {haw98580} 4812 CB6878_redo X 381257 1 C T 43 1.00 63 40 3 4 7 @,,,tTtt point 0 nongenic,nongenic -687 upstream,151 downstream {R04A9.3},{R04A9.4} 4813 CB6878_redo X 381258 1 G C 40 1.00 63 42 3 4 7 @,,,cCcc point 0 nongenic,nongenic -688 upstream,150 downstream {R04A9.3},{R04A9.4} 4814 CB6878_redo X 382890 1 C G 255 1.00 63 62 0 20 20 @GGggGGgGgggGGGgggGGg point 0 nongenic -179 upstream {R04A9.4} 4815 CB6878_redo X 424545 1 T C 255 2.00 63 62 0 20 20 @CcCCCCCccCCccccCCcCC point 0 nongenic 1240 into {ZK1193.4} 4816 CB6878_redo X 424576 1 T C 255 2.06 63 62 0 27 27 @cCCcCCCCCCcCcCCcCccCcccCccc point 0 SNP none {haw98625} 4817 CB6878_redo X 424587 1 T C 255 1.94 63 62 0 28 28 @cCCCCCCcCcCCcCccCcccCccccccC point 0 SNP none {haw98626} 4818 CB6878_redo X 424629 1 T C 255 1.06 63 62 0 22 22 @ccCcCcCcccccCcccccccCc point 0 nongenic 1324 into {ZK1193.4} 4819 CB6878_redo X 424765 1 G T 255 2.25 63 62 0 20 20 @tTTTtttTTTtTTTTTTtTT point 0 SNP none {haw98627} 162473 CB6878_redo X 425409 65 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 930 to 995 bp into {ZK1193.4} 4822 CB6878_redo X 425547 1 C G 255 1.00 63 62 0 17 17 @GgGGGGGGgGgGGGGGG point 0 nongenic 857 into {ZK1193.4} 4835 CB6878_redo X 486102 1 A G 255 1.00 63 62 0 30 30 @gGggGggggggGGGgggggggggggGGggG point 0 SNP none {haw98666} 4837 CB6878_redo X 488806 1 G T 255 1.00 63 62 0 16 16 @ttttttTTtttTTttt point 0 SNP none {haw98668} 4838 CB6878_redo X 491868 1 C A 255 1.00 63 62 0 23 23 @aaaAaaAaaAAAaAaAAaAaaaA point 0 SNP none {haw98673} 4844 CB6878_redo X 538129 1 G T 161 1.81 63 62 0 8 8 @Tttttttt point 0 nongenic,nongenic,nongenic -2292 upstream,-4979 upstream,943 into {F28C10.3},{F28C10.1},{F28C10.4} 4846 CB6878_redo X 538182 1 A G 192 1.06 63 62 0 13 13 @ggggggggggggg point 0 nongenic,nongenic,nongenic -2345 upstream,-4926 upstream,996 into {F28C10.3},{F28C10.1},{F28C10.4} 4849 CB6878_redo X 608671 1 T A 3 1.00 63 30 4 7 11 @GGA,AA,.aa. point 0 nongenic -177 upstream {F13C5.5} 4850 CB6878_redo X 608676 1 A C 22 1.00 63 30 4 8 12 @,,,,Cccccccc point 0 nongenic -182 upstream {F13C5.5} 4851 CB6878_redo X 614946 1 T G 7 5.19 63 10 2 4 6 @G,GGG, point 0 nongenic,nongenic,nongenic,nongenic -14242 upstream,-6452 upstream,3680 into,3814 into {M6.4},{F13C5.5},{F13C5.6a},{F13C5.6b} 4853 CB6878_redo X 785082 1 G A 255 1.00 63 62 0 28 28 @AAaAAaAAAaaaAAaAaAAAaAaAaaAa point 0 nongenic,nongenic -3270 upstream,543 into {T04G9.1},{T04G9.6} 4854 CB6878_redo X 817619 1 A T 255 1.00 63 62 0 24 24 @TTttTTTtTttttTtTTTTTtTTt point 0 SNP none {haw98919} 4855 CB6878_redo X 908161 1 G A 255 1.00 63 62 0 24 24 @AAAAaaaAaAaaaAAAAAaAaaAA point 0 nongenic,nongenic -5127 upstream,-5562 upstream {F35H12.6},{ZC13.10} 4860 CB6878_redo X 1017350 1 T A 255 1.00 63 62 0 24 24 @AaAaaAaaaaAAAAAaAaAAaAaA point 0 missense AAC->ATC[Asn->Ile] {F55A4.2} 4861 CB6878_redo X 1047732 1 C T 255 1.00 63 62 0 35 35 @tTtTtTTTtTttTttTTTTTtTtTTtTTtTtTttT point 0 nongenic,nongenic -1527 upstream,-6479 upstream {F55A4.8a},{K03E6.3} 4864 CB6878_redo X 1073732 1 G T 255 1.00 63 62 0 16 16 @TtttTttTTTtttttT point 0 SNP none {haw99047} 4865 CB6878_redo X 1133524 1 T A 255 1.00 63 62 0 21 21 @AAaAAaAAaAAaAaAAAaaAA point 0 SNP none {haw99081} 4866 CB6878_redo X 1133556 1 T A 244 1.00 63 62 0 14 14 @AAAaaAAAaAAAAa point 0 SNP none {haw99082} 4869 CB6878_redo X 1201508 1 A G 67 1.00 63 8 1 4 5 @GgGg. point 0 nongenic,nongenic -3029 upstream,868 downstream {T13G4.5},{T13G4.6} 4870 CB6878_redo X 1201510 1 G T 9 1.00 63 62 3 4 7 @TtTt.., point 0 nongenic,nongenic -3031 upstream,866 downstream {T13G4.5},{T13G4.6} 4873 CB6878_redo X 1239148 1 C T 255 1.00 63 62 0 22 22 @tTtTtttTtTttTTttTtTTtt point 0 SNP none {haw99128} 4874 CB6878_redo X 1308534 1 C A 255 1.00 63 62 0 17 17 @AAAAAaaaAaAaaaAAa point 0 SNP none {haw99198} 4876 CB6878_redo X 1333863 1 A C 85 1.00 63 62 1 3 4 @,ccC point 0 SNP none {haw99214} 4880 CB6878_redo X 1472305 1 G T 255 1.00 63 62 0 20 20 @TtttTTTTtttTtTtttTTT point 0 SNP none {haw99409} 4884 CB6878_redo X 1519786 1 C A 255 1.00 63 62 0 28 28 @AaAaaAaaaaaaaAaaaAaaaaAAAAAa point 0 nongenic 1698 into {F09E10.8a,F09E10.8b} 4885 CB6878_redo X 1519787 1 C A 255 1.00 63 62 0 29 29 @AaAaaAaaaaaaaAaaaAaaaaAAAAAaa point 0 nongenic 1697 into {F09E10.8a,F09E10.8b} 4891 CB6878_redo X 1604340 1 G T 108 1.00 63 62 0 4 4 @tttt point 0 nongenic -561 upstream {H11E01.3} 4892 CB6878_redo X 1615121 1 C A 40 1.00 63 0 0 5 5 @Aaaaa point 0 silent CCC->CCA[Pro->Pro] {H11E01.3} 4908 CB6878_redo X 1717742 1 C A 255 1.00 63 62 0 13 13 @aaaAaAaaAaaaA point 0 SNP none {haw99773} 4909 CB6878_redo X 1719096 1 T C 173 1.38 63 62 0 8 8 @CCCCccCc point 0 nongenic,nongenic -531 upstream,992 downstream {F07G6.7},{F07G6.8} 6302 CB6878_redo X 1753685 0 X X -1000 -999.99 -1000 -1000 4 0 4 @...,ttN indel 1 nongenic,nongenic -2728 upstream,-5112 upstream {Y75D11A.1},{Y75D11A.6} 4916 CB6878_redo X 1868262 1 G A 255 1.00 63 62 0 32 32 @AAAAAaaAaAaAAAAaaAaAAAaAAAaAaAaA point 0 nongenic -5001 upstream {Y59E1B.2} 4917 CB6878_redo X 1882937 1 A T 3 5.44 0 24 7 11 18 @,.tt,ttt,t,ttttt,, point 0 nongenic -9244 upstream {B0294.3} 4921 CB6878_redo X 1883937 1 T A 10 5.12 34 62 3 6 9 @.,.AAAAAA point 0 nongenic -8244 upstream {B0294.3} 4924 CB6878_redo X 1885828 1 C T 3 6.25 0 0 10 30 40 @t,ttttttTtTtttttt,,t,tttttTtt,t,t,,,tt,t point 0 nongenic -6353 upstream {B0294.3} 4925 CB6878_redo X 1885991 1 C T 7 5.62 1 4 15 25 40 @t,t,,Tttt,,tt,,TTtTt,t,tTtTT,,.tTt,t.,Tt point 0 nongenic -6190 upstream {B0294.3} 162475 CB6878_redo X 2094016 659 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered codon 161 to codon 364 (51 % of 397 codons) {T21D9.1} 4937 CB6878_redo X 2112676 1 G A 255 1.00 63 62 0 40 40 @AAaAAaaAAaAaaAaaAAaAAaAaAAaAaaAAAAaaaaAA point 0 missense TCC->TTC[Ser->Phe] {F53B1.4} 4938 CB6878_redo X 2370396 1 G T 51 1.00 63 52 2 4 6 @,,TTtT point 0 nongenic,nongenic -4459 upstream,-5595 upstream {T24D8.6},{F47G3.3} 4939 CB6878_redo X 2370397 1 A G 52 1.00 63 50 0 7 7 @CCGGgGg point 0 nongenic,nongenic -4460 upstream,-5594 upstream {T24D8.6},{F47G3.3} 4940 CB6878_redo X 2375197 1 C T 255 1.00 63 62 0 33 33 @TtttTTTttTTtttttttTtTTtttttTTTtTT point 0 nongenic,nongenic -794 upstream,-9260 upstream {F47G3.3},{T24D8.6} 4943 CB6878_redo X 2435478 1 G C 43 1.00 63 62 2 3 5 @.,CCc point 0 nongenic,nongenic,nongenic,nongenic -7978 upstream,3520 into,3675 into,3677 into {T07D1.1a,T07D1.1b},{T07D1.2.2},{T07D1.2.3},{T07D1.2.1} 4944 CB6878_redo X 2484648 1 T C 32 1.00 63 62 2 5 7 @.CCCc.c point 0 nongenic,nongenic,nongenic -1742 upstream,-4393 upstream,1392 into {K02E10.6},{K02E10.2a},{K02E10.4a,K02E10.4b} 4945 CB6878_redo X 2522234 1 C A 4 1.00 63 62 4 4 8 @aAAa,... point 0 nongenic -6922 upstream {K02E10.8a,K02E10.8b} 4946 CB6878_redo X 2524915 1 T G 105 1.00 63 62 0 4 4 @GGGG point 0 nongenic,nongenic -9603 upstream,292 downstream {K02E10.8a,K02E10.8b},{R11B5.1} 4950 CB6878_redo X 2894432 1 A T 236 3.56 63 62 0 17 17 @TTTtTTTtttTtTTttT point 0 SNP none {snp_B0410[1]} 6309 CB6878_redo X 3007741 0 X X -1000 -999.99 -1000 -1000 11 -9 2 @,.,,,t.t,,,TA.t. indel 0 nongenic,nongenic -1750 upstream,-3945 upstream {Y48D7A.1},{Y41G9A.6} 4954 CB6878_redo X 3027787 1 C G 255 1.00 63 62 0 21 21 @ggggggggggggggggGgGgg point 0 SNP none {haw101125} 4960 CB6878_redo X 3102869 1 A C 172 1.00 63 62 0 8 8 @ccCCCcCc point 0 nongenic,nongenic -644 upstream,372 downstream {F52E4.8},{K10B3.5} 4973 CB6878_redo X 3158207 1 C A 240 1.00 63 62 0 11 11 @aaaAaaAAAaA point 0 nongenic,nongenic -1722 upstream,-5753 upstream {C15C7.2.1},{C15C7.5} 4978 CB6878_redo X 3225118 1 T G 70 1.00 63 34 0 4 4 @GGGG point 0 nongenic -4758 upstream {F28B4.2a} 4979 CB6878_redo X 3237694 1 A G 255 1.00 63 62 0 38 38 @gGggggGgGgGGgggGGGGgGgggggGGgGggGggggG point 0 missense,SNP TTT->TCT[Phe->Ser],none {F40F4.6},{haw101350} 4980 CB6878_redo X 3293918 1 C T 29 1.56 63 52 2 6 8 @,.TtTTTt point 0 nongenic -3727 upstream {K09C4.2} 4982 CB6878_redo X 3367002 1 C G 255 1.00 63 62 0 37 37 @GGGgGgggggGGgggGggGggGgggGgGggGGgGGGg point 0 nongenic,nongenic -1945 upstream,-4519 upstream {ZK563.2},{ZK816.5} 4983 CB6878_redo X 3367003 1 G C 255 1.00 63 62 0 37 37 @CCCcCcccccCCcccCccCccCcccCcCccCCcCCCc point 0 nongenic,nongenic -1944 upstream,-4520 upstream {ZK563.2},{ZK816.5} 6315 CB6878_redo X 3376415 0 X X -1000 -999.99 -1000 -1000 1 1 2 @.g indel 0 nongenic,nongenic -1685 upstream,774 downstream {ZK563.4a,ZK563.4b},{ZK563.5} 4984 CB6878_redo X 3408399 1 T C 244 1.69 63 62 0 23 23 @CCCcccccccCcCCccCcCccCC point 0 silent ATT->ATC[Ile->Ile] {C04F6.1.1,C04F6.1.2,C04F6.1.3} 4990 CB6878_redo X 3520397 1 C G 140 1.00 63 62 0 10 10 @AGggGGGGGG point 0 nongenic,nongenic -14043 upstream,-8402 upstream {C12D12.5},{F56B6.5a,F56B6.5b} 4991 CB6878_redo X 3571279 1 A G 155 1.50 63 62 0 20 20 @GGGGGGGGGGGGGGGGGGGG point 0 nongenic,nongenic -7316 upstream,1259 into {F59D8.2},{F59D8.1} 4992 CB6878_redo X 3613243 1 C T 255 1.00 63 62 0 15 15 @TttttTTTTTTtTTT point 0 nongenic,nongenic -2160 upstream,141 downstream {C18B2.5a.1},{C18B2.6} 4993 CB6878_redo X 3631398 1 C G 68 2.69 63 62 13 16 29 @TgGgGGgGGG,,,GG,,GG,,GG,.,,,, point 0 nongenic 525 downstream {C18B2.1} 4994 CB6878_redo X 3631566 1 G A 133 2.88 63 62 21 80 101 @,A,.,,,,a.,AA,..,.,.,.Aaa.AA,AAAaAAAA,AaaaAAAaAAAAAAAAAAaAaAAAAAAaAAAAaaaaaaAAAaaaAAAAAAaaAAaaaAAaA point 0 nongenic,nongenic 693 downstream,976 downstream {C18B2.1},{R11G1.3} 4995 CB6878_redo X 3631670 1 T G 204 3.75 63 62 21 79 100 @,,GG,Gg,g.,G,g,gGg,,G,Gg,G,GG,GGGGG,GG,,GGGGG,ggGGGGGGggG,GgGGGGGggGGGgGGgGggG,gggGG,gGGgGgggGGGGGg point 0 SNP none {uCE6-825} 4996 CB6878_redo X 3631690 1 C G 199 3.56 63 62 60 145 205 @,Gg,G,GG,,,G,G,G,,,GGG,G,g.G,GGGGgg,,,g,GGGGggGG,g,GgGggG,gggG,,gGGgGgggGGGGGggaGGGgggGG,GggGgggg.. point 0 SNP none {haw101541} 4997 CB6878_redo X 3631792 1 G T 45 1.12 63 62 45 76 121 @.,.,.Tt,TTt..t.tTttT,TT,.tTTttttTT...tTTTTTttt.Tt,TT,tt,.tT,tT.ttTTTtTT...,TT.t,.tttT,T.T,T..t.t.,, point 0 SNP none {haw101542} 4998 CB6878_redo X 3653458 1 T C 255 1.00 63 62 0 33 33 @CCCCCCcCCcCcCCCCccCCCCCcCCccCcccC point 0 SNP none {haw101553} 6317 CB6878_redo X 3751247 3 X X -1000 -999.99 -1000 -1000 13 5 18 @,,.,,...,.,.,gg indel -3 nongenic -8936 upstream {T14G12.4a} 5000 CB6878_redo X 3802908 1 G C 127 1.00 63 52 2 9 11 @,.ccCCccCCC point 0 nongenic,nongenic,nongenic -155 upstream,-170 upstream,-2161 upstream {F35A5.8b},{F35A5.8a},{F35A5.2} 5001 CB6878_redo X 3811358 1 A C 17 1.00 63 62 2 5 7 @,,ccCcc point 0 nongenic 3909 into {F35A5.1} 5002 CB6878_redo X 3811996 1 T G 160 1.25 63 62 1 8 9 @GgggGggG, point 0 nongenic 4398 into {F35A5.1} 5005 CB6878_redo X 3812067 1 A T 32 1.38 63 62 10 10 20 @,,TT,t,tt,,,,T,t,ttt point 0 nongenic 4327 into {F35A5.1} 5006 CB6878_redo X 3812100 1 T A 105 1.00 63 62 14 19 33 @,,,A,a,aaa,,,aaa,A,AAAa,,Aa,,aAaa point 0 nongenic 4294 into {F35A5.1} 5010 CB6878_redo X 3867513 1 T A 22 1.00 63 62 3 5 8 @,,,aaAAA point 0 nongenic -9734 upstream {ZC64.3a,ZC64.3b,ZC64.3c} 5011 CB6878_redo X 3867515 1 A G 73 1.00 63 22 2 7 9 @,,ggGGGGG point 0 nongenic -9736 upstream {ZC64.3a,ZC64.3b,ZC64.3c} 5012 CB6878_redo X 3900889 1 G C 43 1.00 63 10 0 4 4 @CCCC point 0 nongenic,nongenic -3681 upstream,-5230 upstream {T22B2.4a},{F47F2.3} 5013 CB6878_redo X 3902119 1 A C 130 1.00 63 62 0 9 9 @tcccccccc point 0 nongenic,nongenic -2451 upstream,-6460 upstream {T22B2.4a},{F47F2.3} 5016 CB6878_redo X 3924055 1 A G 255 1.00 63 62 0 28 28 @GGgGGgGggGggggGgGGGggGGGGgGg point 0 nongenic,nongenic -2005 upstream,841 downstream {T22B2.1},{T22B2.2} 5019 CB6878_redo X 4025107 1 A G 255 1.00 63 62 0 19 19 @gGgGGGGGgggggggGGGG point 0 silent AAA->AAG[Lys->Lys] {R02E12.8} 5080 CB6878_redo X 4241735 1 A C 200 1.44 63 62 0 11 11 @ccCcccccccc point 0 SNP none {haw101997} 5081 CB6878_redo X 4241797 1 A G 66 2.00 40 62 0 4 4 @gggg point 0 nongenic -5974 upstream {W01H2.3a} 5082 CB6878_redo X 4241827 1 T C 156 1.69 38 62 0 14 14 @ccCGccCcCCCCCC point 0 nongenic -6004 upstream {W01H2.3a} 5083 CB6878_redo X 4241844 1 G A 117 2.06 38 62 8 10 18 @A,aaA.AAAA,A,,,A,, point 0 nongenic -6021 upstream {W01H2.3a} 5084 CB6878_redo X 4241867 1 G T 49 4.00 31 62 3 15 18 @,,TTT,TTTTTTTTTTTT point 0 nongenic -6044 upstream {W01H2.3a} 5085 CB6878_redo X 4241902 1 T C 19 4.81 0 2 0 12 12 @CCCCCCCCCCCc point 0 nongenic -6079 upstream {W01H2.3a} 5086 CB6878_redo X 4241910 1 T C 3 4.69 0 14 1 8 9 @CCCCCCCC. point 0 nongenic -6087 upstream {W01H2.3a} 5087 CB6878_redo X 4242071 1 T C 25 2.62 0 24 0 11 11 @ccccCCcCcCC point 0 nongenic -6248 upstream {W01H2.3a} 5088 CB6878_redo X 4242094 1 G A 16 2.88 0 14 0 9 9 @AAAAAAAAA point 0 nongenic -6271 upstream {W01H2.3a} 5089 CB6878_redo X 4242110 1 A C 128 2.06 35 62 0 13 13 @CCCCCCCCCCCCC point 0 nongenic -6287 upstream {W01H2.3a} 5093 CB6878_redo X 4260440 1 G T 33 1.00 63 4 0 5 5 @tTTTt point 0 nongenic -187 upstream {C52B9.4} 5094 CB6878_redo X 4341356 1 A T 3 9.62 0 0 3 5 8 @.,,tttgt point 0 nongenic,nongenic,nongenic -2870 upstream,-5345 upstream,1737 into {F14H12.3},{C24A8.4},{F14H12.4a,F14H12.4b} 5098 CB6878_redo X 4490688 1 A G 22 1.00 63 30 1 4 5 @.GGgg point 0 nongenic,nongenic -10596 upstream,936 downstream {F02E8.6},{F46H6.5} 5099 CB6878_redo X 4504875 1 G C 28 1.00 63 2 2 2 4 @,,cc point 0 nongenic,nongenic -3604 upstream,-512 upstream {F46H6.1.1},{F46H6.2a,F46H6.2b.1} 5101 CB6878_redo X 4513922 1 C T 246 1.00 63 62 0 14 14 @tttttttttttTtT point 0 SNP none {snp_F46H6[6]} 5102 CB6878_redo X 4550018 1 A C 6 1.00 63 16 0 4 4 @CCCG point 0 nongenic -4646 upstream {C07A12.1b} 5103 CB6878_redo X 4556555 1 G T 41 1.00 63 0 2 4 6 @,.ttTt point 0 nongenic,nongenic,nongenic -553 upstream,1890 into,1891 into {C07A12.1c},{C07A12.1a},{C07A12.1b} 5108 CB6878_redo X 4577179 1 A T 255 1.00 63 62 0 20 20 @TTtttTTttttTttTtTTtT point 0 SNP none {haw102400} 5109 CB6878_redo X 4578097 1 T C 255 1.00 63 62 0 17 17 @CCCcccCcCCcccCCcC point 0 nongenic -1381 upstream {C05E11.3} 5110 CB6878_redo X 4603454 1 G C 84 1.00 63 0 3 6 9 @,,,CCCcCC point 0 silent GCC->GCG[Ala->Ala] {T13H2.5a} 5111 CB6878_redo X 4645170 1 C A 255 1.00 63 62 0 43 43 @AaAAaaAAaAAAAaaaaaAaaAaaAaaaAAAaAAaaAaAAaaA point 0 missense,SNP GCT->TCT[Ala->Ser],none {C46C11.4},{haw102467,pas15116} 5115 CB6878_redo X 4802167 1 G A 14 1.00 63 62 4 10 14 @.aaaa,,aaaaa,A point 0 nongenic -2068 upstream {F43C9.4a} 6327 CB6878_redo X 4938560 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @.,.,aa indel 0 nongenic,nongenic -8839 upstream,-9458 upstream {K05B2.5b,K05B2.5c},{M03F4.3a,M03F4.3c.2} 5116 CB6878_redo X 4938561 1 G C 41 1.00 63 38 2 4 6 @cCcC.. point 0 nongenic,nongenic -8840 upstream,-9456 upstream {K05B2.5b,K05B2.5c},{M03F4.3a,M03F4.3c.2} 5117 CB6878_redo X 4938562 1 A T 39 1.00 63 40 2 4 6 @tTtT.. point 0 nongenic,nongenic -8841 upstream,-9455 upstream {K05B2.5b,K05B2.5c},{M03F4.3a,M03F4.3c.2} 162479 CB6878_redo X 4950554 4432 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered,uncovered 1526 bp upstream to codon 448 (92 % of 486 codons),codon 2 to codon 527 (93 % of 565 codons),codon 30 to codon 555 (89 % of 593 codons) {M03F4.3c.1,M03F4.3c.2},{M03F4.3a},{M03F4.3b} 162480 CB6878_redo X 4955140 116 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 7122 to 7238 bp into {M03F4.3a} 5118 CB6878_redo X 4971580 1 C T 255 1.00 63 62 0 28 28 @TtTttttttTTtTttTtTttTtTtTtTT point 0 nongenic,nongenic,nongenic -699 upstream,-715 upstream,989 downstream {M03F4.7a},{M03F4.7b},{ZC8.6} 5119 CB6878_redo X 4971581 1 A C 255 1.00 63 62 0 29 29 @CcCccccccCCcCccCcCccCcCcCcCCC point 0 nongenic,nongenic,nongenic -700 upstream,-716 upstream,988 downstream {M03F4.7a},{M03F4.7b},{ZC8.6} 5123 CB6878_redo X 5123322 1 T G 255 1.00 63 62 0 20 20 @ggGGgGGGggggGGGGGGgg point 0 nongenic,nongenic -15637 upstream,-6482 upstream {C31H2.1a,C31H2.1b},{C42D8.8b.1} 5124 CB6878_redo X 5134151 1 C G 255 1.00 63 62 0 38 38 @GgGgGGGGggggggggggggggGggGGggGggggGGgg point 0 nongenic,nongenic -17311 upstream,-4808 upstream {C42D8.8b.1},{C31H2.1a,C31H2.1b} 5125 CB6878_redo X 5134152 1 G C 255 1.00 63 62 0 38 38 @CcCcCCCCccccccccccccccCccCCccCccccCCcc point 0 nongenic,nongenic -17312 upstream,-4807 upstream {C42D8.8b.1},{C31H2.1a,C31H2.1b} 162483 CB6878_redo X 5140366 50 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1406 to 1456 bp into {C31H2.1a,C31H2.1b} 5144 CB6878_redo X 5403139 1 C G 14 2.50 0 0 0 4 4 @gGGg point 0 nongenic,nongenic,nongenic -2587 upstream,1494 into,1688 into {C03F11.3},{C03F11.4.2,C03F11.4.3},{C03F11.4.1} 6332 CB6878_redo X 5508058 4 X X -1000 -999.99 -1000 -1000 8 -6 2 @..,,.,., indel -4 SNP none {uCE6-931} 6333 CB6878_redo X 5509588 0 X X -1000 -999.99 -1000 -1000 2 -1 1 @.,Gg indel 0 nongenic -4373 upstream {T23F2.2a,T23F2.2b} 5150 CB6878_redo X 5634541 1 T A 31 1.50 63 62 1 3 4 @AaA, point 0 nongenic -3305 upstream {T22B7.8} 5151 CB6878_redo X 5651446 1 T A 255 1.00 63 62 0 20 20 @AaAaAAaaAaaAaAaAAAaA point 0 nongenic 385 downstream {T22B7.7} 5153 CB6878_redo X 5692014 1 T G 36 1.00 63 28 1 3 4 @.ggg point 0 nongenic,nongenic -1460 upstream,-7312 upstream {W01C8.1},{W01C8.4b} 5154 CB6878_redo X 5744891 1 T A 255 1.00 63 62 0 21 21 @aAAAAaaAAaaAaAaaAAAaa point 0 nongenic -1621 upstream {C41G11.4a.1} 5156 CB6878_redo X 5857436 1 T G 255 1.00 63 62 0 20 20 @ggGGGGGGGgggGggGggGg point 0 nongenic,nongenic -3221 upstream,-5280 upstream {W06B11.4},{F49E10.5} 5157 CB6878_redo X 5883992 1 C T 255 1.00 63 62 0 31 31 @TttTtTtTTttTTTTTTtTtTtttTTTttTt point 0 SNP none {haw103817} 5158 CB6878_redo X 6059575 1 C T 67 1.00 63 62 5 9 14 @.,...tTTttTttt point 0 missense CCC->TCC[Pro->Ser] {C45B2.5.1,C45B2.5.2} 5159 CB6878_redo X 6064935 1 A G 30 1.00 63 62 2 4 6 @gggg,, point 0 nongenic,nongenic -5522 upstream,1013 into {C45B2.4a,C45B2.4b.2},{C45B2.7} 5160 CB6878_redo X 6107174 1 T A 255 1.00 63 62 0 26 26 @aAAaaAAaaAAaaaaaaaaaaAAAaa point 0 nongenic 289 into {C15H9.7} 5163 CB6878_redo X 6227740 1 T G 38 1.00 63 10 0 4 4 @GGgg point 0 nongenic,nongenic -13868 upstream,1651 into {C14F11.2},{C14F11.3} 5164 CB6878_redo X 6287251 1 T A 16 5.50 0 0 0 8 8 @aaaaaaaa point 0 nongenic,nongenic,nongenic -1120 upstream,-5833 upstream,828 into {T07H6.4},{T07H6.2},{T07H6.5} 5165 CB6878_redo X 6287308 1 T A 42 3.00 63 42 0 4 4 @aaaa point 0 nongenic,nongenic,nongenic -1177 upstream,-5776 upstream,885 into {T07H6.4},{T07H6.2},{T07H6.5} 5166 CB6878_redo X 6287344 1 C A 53 2.81 63 60 1 4 5 @a.aaa point 0 nongenic,nongenic,nongenic -1213 upstream,-5740 upstream,921 into {T07H6.4},{T07H6.2},{T07H6.5} 5167 CB6878_redo X 6287349 1 A G 26 4.75 63 18 2 2 4 @gg.. point 0 nongenic,nongenic,nongenic -1218 upstream,-5735 upstream,926 into {T07H6.4},{T07H6.2},{T07H6.5} 5171 CB6878_redo X 6287441 1 T A 3 5.25 0 2 0 9 9 @GAGaaaaaa point 0 nongenic,nongenic,nongenic -1310 upstream,-5643 upstream,1018 into {T07H6.4},{T07H6.2},{T07H6.5} 162486 CB6878_redo X 6287477 328 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3733 to 4061 bp into {T07H6.5} 5173 CB6878_redo X 6412638 1 A T 255 1.00 63 62 0 26 26 @TTTtttttttTtTTtTTttttTTttt point 0 SNP none {haw104221} 5174 CB6878_redo X 6450894 1 C T 255 1.00 63 62 0 34 34 @TTtTTtTTtTttttTTtTTTTTTtTNTtttTttT point 0 non_start ATG->ATA[Met->Ile] {K10C2.5} 5175 CB6878_redo X 6575660 1 G T 255 1.00 63 62 0 19 19 @ttTTTttTttTtTtttTtt point 0 nongenic -6184 upstream {T14E8.3a,T14E8.3b} 5179 CB6878_redo X 6792031 1 G C 255 1.00 63 62 0 32 32 @CcccCCcCCcCCCcccCCcCCCccCCccccTC point 0 missense GAG->GAC[Glu->Asp] {H22K11.1} 5183 CB6878_redo X 6895262 1 A C 255 1.00 63 62 0 27 27 @CcccCccCCccccCCccCCcCcCcCCc point 0 nongenic,nongenic,nongenic -10030 upstream,1829 into,1833 into {F41C6.7},{F41C6.1.1},{F41C6.1.2} 5184 CB6878_redo X 6949712 1 T C 60 1.00 63 20 2 4 6 @,,ccCc point 0 nongenic,nongenic,nongenic -17608 upstream,-202 upstream,6020 into {F01E11.3},{C16E9.4b},{C16E9.4a} 5185 CB6878_redo X 6988065 1 C G 66 1.00 63 62 1 3 4 @gGG. point 0 nongenic -3642 upstream {F01E11.1} 5188 CB6878_redo X 6992875 1 T G 41 1.00 63 32 1 3 4 @gGg, point 0 nongenic 1168 into {F01E11.1} 5201 CB6878_redo X 7077720 1 T C 154 6.31 63 62 80 175 255 @C,CCCCCCC,CCCCCCCCcccccccc.cccccccccCCCCCCCCCCCCCCCCCC,CC,CCc.cc.ccccccc.ccccc.cCCCCCCCCCCCCCCCCCCC point 0 nongenic,nongenic -2432 upstream,-7596 upstream {B0403.6},{Y1B5A.1} 6344 CB6878_redo X 7077946 0 X X -1000 -999.99 -1000 -1000 42 -40 2 @,GCCCCC.,,,,,,,,,,,,,,,,,,,,,,.,,,.............. indel 3 nongenic,nongenic -2658 upstream,-7371 upstream {B0403.6},{Y1B5A.1} 5205 CB6878_redo X 7078149 1 A T 6 5.81 28 28 171 84 255 @,,,,,.T,T,,.....,....,,,TTT,,t..t....ttt....t.......t.ttt.......t,,,,TT,,T......t...t...tt.,.T.T,., point 0 nongenic,nongenic -2861 upstream,-7167 upstream {B0403.6},{Y1B5A.1} 5206 CB6878_redo X 7078203 1 A G 42 8.62 5 62 83 172 255 @Gg.gGGGggggGGg.tggGGg.gG,G.gg.gg.gGGGGGTGggg..ggggggggGGGGGGGggggggGGGGG..gg..ggggg..g.GGG,,,GGgg.g point 0 nongenic,nongenic -2915 upstream,-7113 upstream {B0403.6},{Y1B5A.1} 5207 CB6878_redo X 7078278 1 G A 16 7.81 30 62 266 -11 255 @T..AT,a.,A,Aaa.aA,..A...a.aA,..aaAaaAA,,aa.AATa.aaaaa.AAAaa.a.a.a.a.aaa..aaa.....aaa..AAA,..aaaaaaa point 0 nongenic,nongenic -2990 upstream,-7038 upstream {B0403.6},{Y1B5A.1} 5208 CB6878_redo X 7078298 1 G A 3 7.00 7 20 123 132 255 @ATAATA.aa..a..aaa,aaaa.a.aA,AAaaaaa.aaaaaa.aaaaA,Aa.aaaaaAAAaaaa....a.aaa.aAAA.aaa.aaaaa...aaA,,AAA point 0 nongenic,nongenic -3010 upstream,-7018 upstream {B0403.6},{Y1B5A.1} 5210 CB6878_redo X 7078449 1 A T 20 6.06 29 28 161 94 255 @GTT,,.t.,,,T,,,,T,,,,t..T,T,,,T..,T,T,T,,,..........T,T,,,T,,TT,,tt.....tt...T,T,,,T,T,,,T.t,T,,,,, point 0 nongenic,nongenic -3161 upstream,-6867 upstream {B0403.6},{Y1B5A.1} 5213 CB6878_redo X 7078663 1 A G 3 9.06 0 16 41 214 255 @gGggG...GgGGggG,.ggGGG.gGG.gGG..g..gGg.GG,.g.GGGgg.gggggGGGGgggggg.ggGGGGGGgggggggG.gggggggg.ggggGG point 0 nongenic,nongenic -3375 upstream,-6653 upstream {B0403.6},{Y1B5A.1} 5214 CB6878_redo X 7078698 1 T A 3 5.31 0 10 42 158 200 @AAAA,AAgA,,g..,A.AGAaaa.,agaaAaga..GGaaa.,...a.a,Ga.,....,,G..aAA,.a...aaaAAAGGGAagAAGAAGAAAAgaaAAA point 0 nongenic,nongenic -3410 upstream,-6618 upstream {B0403.6},{Y1B5A.1} 5219 CB6878_redo X 7079063 1 A G 3 9.38 0 12 42 172 214 @,.Gg,,GGGGg.Gg,G,g.g.gGgggGG,,g.GggGG,GGGggGGGGGGg.ggggggggGgggggggggg.g.G,GggggggggGGGGgggggggGGGG point 0 nongenic,nongenic -3775 upstream,-6253 upstream {B0403.6},{Y1B5A.1} 5220 CB6878_redo X 7096053 1 A C 255 1.00 63 62 0 26 26 @cCCcccccccCcccCCcCCcccCCcC point 0 missense CTA->CGA[Leu->Arg] {C36B7.5a,C36B7.5b} 5221 CB6878_redo X 7112263 1 G T 53 2.62 63 62 3 6 9 @tttttt,,, point 0 nongenic -576 upstream {C36B7.1} 5223 CB6878_redo X 7224737 1 A T 255 1.00 63 62 0 32 32 @TtTttTttttTtTTTtTtTtTttTTTTtttTT point 0 nongenic 2032 into {ZK867.1a,ZK867.1b,ZK867.1c,ZK867.1d} 5224 CB6878_redo X 7247377 1 C A 255 1.00 63 62 0 31 31 @AaaaaaAAaAAaaaaaAaAaAAAaaaAAAAN point 0 SNP none {haw104705} 5230 CB6878_redo X 7361569 1 A G 32 2.25 36 10 1 3 4 @GGG, point 0 nongenic -3945 upstream {C56G3.2} 5239 CB6878_redo X 7411509 1 G A 51 1.00 63 22 2 5 7 @AAAaa.. point 0 nongenic -934 upstream {C10A4.2} 5240 CB6878_redo X 7411510 1 A C 23 1.00 63 50 3 5 8 @CCCcc... point 0 nongenic -933 upstream {C10A4.2} 5243 CB6878_redo X 7492010 1 T C 255 1.00 63 62 0 18 18 @CCcCcccccccCCCcCcc point 0 nongenic 1059 into {F48E3.2} 5248 CB6878_redo X 7527774 1 C T 175 1.00 63 62 0 11 11 @ttttttttttt point 0 SNP none {haw104910} 6349 CB6878_redo X 7559950 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @,...cC indel 0 nongenic,nongenic -126 upstream,-950 upstream {F08C6.5},{PDB1.1b.1} 5249 CB6878_redo X 7566551 1 T C 255 1.00 63 62 0 36 36 @ccccccCccccccCccCcCccCCCCcCCCCccCccC point 0 missense,SNP GTT->GCT[Val->Ala],none {F08C6.3},{haw104923} 5250 CB6878_redo X 7588883 1 T C 255 1.00 63 62 0 35 35 @CcccCCCcccCcCccCCCcCcccCCCccCccccCc point 0 missense TCA->CCA[Ser->Pro] {F08C6.1a.1,F08C6.1a.2,F08C6.1c} 5251 CB6878_redo X 7671832 1 A C 4 1.00 63 62 3 6 9 @.,.CCCcCc point 0 nongenic,nongenic -1102 upstream,-2459 upstream {F27D9.2},{F27D9.7} 5257 CB6878_redo X 7719005 1 A C 8 1.00 63 0 2 5 7 @,,cccCc point 0 nongenic,nongenic -208 upstream,-8346 upstream {K09F5.6},{K09F5.4} 5258 CB6878_redo X 7729211 1 C T 255 1.00 63 62 0 47 47 @tttTTTttTTTTTTTTttTTTTTTttttTtTtTttTtTTTTtTTTTt point 0 silent CTC->CTT[Leu->Leu] {K09F5.2} 5259 CB6878_redo X 7764853 1 T A 246 4.44 63 62 0 13 13 @AAaAAaAAaaAAa point 0 nongenic,nongenic,nongenic -6756 upstream,1693 into,1703 into {C47C12.4},{C47C12.6.1,C47C12.6.2},{C47C12.6.3} 5263 CB6878_redo X 7771370 1 G A 174 1.00 63 62 0 11 11 @aaaaaaaaaaa point 0 nongenic,nongenic,nongenic,nongenic -13273 upstream,3389 into,3390 into,3488 into {C47C12.4},{C47C12.6.2},{C47C12.6.3},{C47C12.6.1} 5264 CB6878_redo X 7771404 1 G A 144 1.00 63 62 0 7 7 @aaaaaaa point 0 nongenic,nongenic,nongenic,nongenic -13307 upstream,3355 into,3356 into,3454 into {C47C12.4},{C47C12.6.2},{C47C12.6.3},{C47C12.6.1} 5273 CB6878_redo X 7872981 1 C A 255 1.00 63 62 0 25 25 @aaaAaAaaaAaaaaaaAaaaaaAaA point 0 SNP none {haw105178} 5282 CB6878_redo X 8029563 1 C T 255 1.00 63 62 0 16 16 @tTtTTTTTtTTtTTTT point 0 SNP none {haw105378} 5284 CB6878_redo X 8033820 1 G C 111 1.00 63 62 0 5 5 @CCccc point 0 missense GCC->GGC[Ala->Gly] {C18A11.6} 5285 CB6878_redo X 8076590 1 A T 130 1.00 63 62 0 8 8 @CcTttTTt point 0 nongenic -1097 upstream {C46F2.1} 5287 CB6878_redo X 8182016 1 G T 110 3.12 63 62 12 21 33 @,T,Tt,ttTtTTttttTTttT,.,,,.T,.T,t point 0 nongenic -433 upstream {C17H11.4} 5290 CB6878_redo X 8325358 1 G T 50 1.00 63 62 2 4 6 @,,TtTt point 0 missense CAA->AAA[Gln->Lys] {R09F10.8.1,R09F10.8.2} 5291 CB6878_redo X 8374920 1 C T 94 1.00 63 0 0 5 5 @TtTTt point 0 nongenic,nongenic -1100 upstream,505 downstream {F40B5.1},{F40B5.3} 5296 CB6878_redo X 8456633 1 C T 255 1.00 63 62 0 18 18 @TtTTTTtttTTTTttTtT point 0 nongenic,nongenic -1052 upstream,-944 upstream {F16F9.2},{F16F9.3b} 5297 CB6878_redo X 8496324 1 G T 255 1.00 63 62 0 20 20 @TttTTtttTttTtTttTtTt point 0 nongenic,nongenic,nongenic -20207 upstream,-3279 upstream,1063 into {T01B10.4a.1,T01B10.4a.2,T01B10.4b},{T01B10.2},{T01B10.5} 6359 CB6878_redo X 8550626 0 X X -1000 -999.99 -1000 -1000 6 -2 4 @,,,..,AAa indel 0 nongenic,nongenic -1576 upstream,-1711 upstream {D2021.2a},{D2021.4a,D2021.4b} 5301 CB6878_redo X 8602894 1 T A 24 1.12 63 62 5 8 13 @AA,.AA..AAAA. point 0 nongenic,nongenic 569 downstream,768 downstream {H35N09.2},{F18E9.1} 5302 CB6878_redo X 8602905 1 T G 150 1.31 63 34 0 6 6 @gGGGGg point 0 nongenic,nongenic 558 downstream,779 downstream {H35N09.2},{F18E9.1} 5304 CB6878_redo X 8603049 1 A G 115 1.00 63 62 0 5 5 @gGGGg point 0 nongenic,nongenic 414 downstream,923 downstream {H35N09.2},{F18E9.1} 5305 CB6878_redo X 8624952 1 A G 83 1.00 63 28 2 5 7 @GgGGg,. point 0 nongenic 228 into {K01A12.3} 5306 CB6878_redo X 8624954 1 T A 29 1.00 63 62 2 3 5 @AAa,. point 0 nongenic 226 into {K01A12.3} 5307 CB6878_redo X 8629824 1 A C 255 1.00 63 62 0 24 24 @CCCCCccCCCCccCcCcCcCccCc point 0 SNP none {haw105786} 5308 CB6878_redo X 8651677 1 G A 43 1.00 63 14 1 4 5 @.AAAA point 0 nongenic,nongenic -4638 upstream,-9557 upstream {F12D9.2},{K09E2.4a} 5309 CB6878_redo X 8728860 1 A G 255 1.00 63 62 0 38 38 @GgGgggGGGggGGGGgggGGgggGggGGGgGGGGGgGG point 0 nongenic -1512 upstream {EGAP4.1} 5312 CB6878_redo X 8801882 1 A G 9 1.00 63 62 2 4 6 @GG,,Gg point 0 three_prime_UTR none {R04E5.8a} 5313 CB6878_redo X 8874472 1 C T 255 1.00 63 62 0 16 16 @TtTtTTTTTtTTTTtt point 0 nongenic,nongenic -5116 upstream,103 into {C06E2.2},{C06E2.1} 5314 CB6878_redo X 8899246 1 C T 255 1.00 63 62 0 39 39 @TtTTTTTtttTTTTtTttTttttTTtttTttTTtttttT point 0 nongenic,nongenic -8743 upstream,788 downstream {D1009.3a,D1009.3b},{C13E3.1} 5315 CB6878_redo X 8900503 1 A C 16 1.00 63 48 3 5 8 @.,,CcCCc point 0 nongenic -7486 upstream {D1009.3a,D1009.3b} 5316 CB6878_redo X 8900504 1 C A 49 1.00 63 16 2 5 7 @,,AaAAa point 0 nongenic -7485 upstream {D1009.3a,D1009.3b} 5317 CB6878_redo X 8904753 1 C T 255 1.00 63 62 0 22 22 @TTTTTTTtTttTttttTTTTtt point 0 nongenic -3236 upstream {D1009.3a,D1009.3b} 5318 CB6878_redo X 8941347 1 C T 67 1.00 63 62 4 7 11 @,...TtTTTTt point 0 missense CGA->CAA[Arg->Gln] {D1073.1a,D1073.1b} 5319 CB6878_redo X 8984742 1 C G 20 1.00 63 62 1 3 4 @GGg. point 0 nongenic,nongenic -3332 upstream,451 downstream {C24A3.6.1,C24A3.6.2},{C48C5.1} 5320 CB6878_redo X 9072485 1 G A 255 1.00 63 62 0 44 44 @aAaaAaAAaaAaAaaaaAaAaaaaAaaaaaAaaAaaAAAaaAAa point 0 nongenic -1252 upstream {F47E1.1} 5321 CB6878_redo X 9078230 1 A G 87 7.69 63 62 5 18 23 @..G.GGGGGG.GGGGGGG.GGGG point 0 ncRNA none {F47E1.t1} 5322 CB6878_redo X 9114559 1 T C 255 1.00 63 62 0 37 37 @cccccCccCccCCcccCccccccCcCCCccccccCCc point 0 silent,SNP CTT->CTC[Leu->Leu],none {C25A11.2},{haw106138,pas23144} 5325 CB6878_redo X 9171369 1 G T 255 1.00 63 62 0 26 26 @tttTtTTTTttttTttttTtttttTT point 0 SNP none {haw106181} 5326 CB6878_redo X 9188219 1 C T 255 5.69 63 62 43 139 182 @,.,,,.,...,,.,.,.,.,,.,G,.,,..,,,.,t,,TTTTtTttTTTtT,ttTTTTTTTTttTttTTtTTtttTTTtttTTTTTT.ttTTTTTTTtt point 0 SNP none {haw106187} 162488 CB6878_redo X 9189092 204 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 4993 to 5197 bp into {Y81B9A.2} 5331 CB6878_redo X 9212879 1 T G 9 1.00 63 62 3 3 6 @...Ggg point 0 nongenic,nongenic -1007 upstream,798 downstream {C35B8.3a.1},{C35B8.4} 5332 CB6878_redo X 9262189 1 G T 255 1.00 63 62 0 29 29 @TttTTtTttTTtttTttTTtTtTtTTTTt point 0 three_prime_UTR none {F18G5.6} 5333 CB6878_redo X 9301362 1 C A 18 1.00 63 40 2 4 6 @Aaaa.. point 0 nongenic -2294 upstream {B0416.1} 5334 CB6878_redo X 9328750 1 C T 121 1.00 63 62 0 4 4 @TtTt point 0 nongenic,nongenic -2327 upstream,-9636 upstream {T20B5.2},{F35G8.1} 5335 CB6878_redo X 9407197 1 C A 255 1.00 63 62 0 34 34 @AaaAAAaAAAaAAAAaaAaAAAaaaAAAaaAAAa point 0 premature_stop TAC->TAA[Tyr->stop] {C23F12.2} 5336 CB6878_redo X 9460186 1 A C 36 2.00 63 38 12 26 38 @CCc,cc,CC,ccccC,c,ccc,c,c,CC,C,cc.,ccC point 0 missense GAT->GAG[Asp->Glu] {ZK899.5} 5338 CB6878_redo X 9462102 1 T C 255 1.38 63 62 0 16 16 @CcccCCCCCCcCCccc point 0 nongenic,nongenic -1186 upstream,-1234 upstream {ZK899.6},{ZK899.5} 5341 CB6878_redo X 9536669 1 T A 255 1.00 63 62 0 20 20 @AaAaAaaAaaaaaaaAAaaA point 0 SNP none {haw106328} 5342 CB6878_redo X 9538545 1 G A 255 1.00 63 62 0 23 23 @aaaAAAaAaaAAAaaAaaAaaaa point 0 nongenic -1294 upstream {C07B5.5} 5351 CB6878_redo X 9644694 1 C T 255 1.00 63 62 0 17 17 @TTTtTTTTtTtTTTtTt point 0 nongenic -3772 upstream {F34H10.4} 5352 CB6878_redo X 9703760 1 T A 208 1.19 63 62 0 18 18 @aAAAAAAAAAAAAAAaAA point 0 nongenic -3113 upstream {F15G9.1a} 5353 CB6878_redo X 9703853 1 T C 223 1.00 63 62 0 11 11 @CcCCcCCCCCC point 0 nongenic -3020 upstream {F15G9.1a} 5354 CB6878_redo X 9724200 1 G A 255 1.00 63 62 0 26 26 @AaaAAAaAAaAAAAAAAaAAaaAaaa point 0 missense GGA->AGA[Gly->Arg] {F15G9.4a,F15G9.4b,F15G9.4d} 5355 CB6878_redo X 9774476 1 A G 255 1.00 63 62 0 16 16 @GgGgGgGgggGGgGGg point 0 SNP none {haw106424} 5357 CB6878_redo X 9790629 1 A G 35 1.00 63 0 0 4 4 @Gggg point 0 nongenic -1483 upstream {F36G3.1.1} 5358 CB6878_redo X 9861507 1 G T 255 1.00 63 62 0 29 29 @TTtttttttTttttTtTttTtTtTtttTt point 0 missense,SNP AGT->ATT[Ser->Ile],none {R07B1.3},{haw106438} 5359 CB6878_redo X 9882632 1 A C 255 1.00 63 62 0 13 13 @cCCcCCCCcCccc point 0 nongenic,nongenic -1579 upstream,-491 upstream {F21G4.2},{R07B1.12} 5362 CB6878_redo X 9999591 1 A G 255 1.00 63 62 0 18 18 @GggGggGggGgGggGggg point 0 nongenic,nongenic -1281 upstream,-478 upstream {F19C6.2a,F19C6.2b},{F19C6.1} 6371 CB6878_redo X 10071939 0 X X -1000 -999.99 -1000 -1000 4 0 4 @,,.,Cccc indel 0 nongenic,nongenic -2221 upstream,685 downstream {ZC373.4},{ZC373.5} 5363 CB6878_redo X 10130976 1 T G 187 1.00 63 62 0 12 12 @GGGGGGGGGGGG point 0 SNP none {haw106550} 5364 CB6878_redo X 10203120 1 G A 255 1.00 63 62 0 26 26 @AaaAaaAaAAAaAaaaaaAAaAaAAa point 0 silent ATC->ATT[Ile->Ile] {F44A6.2.1,F44A6.2.2} 5365 CB6878_redo X 10298115 1 T A 12 1.00 63 62 4 5 9 @..,.AAAAa point 0 nongenic,nongenic -12447 upstream,-4463 upstream {F41E7.3},{F41E7.4} 5367 CB6878_redo X 10306247 1 T A 255 1.00 63 62 0 25 25 @AaAAAAAaAaAAAAaaAaaAAaaAa point 0 nongenic,nongenic -288 upstream,-290 upstream {F41E7.8.2},{F41E7.8.1} 5368 CB6878_redo X 10308160 1 T A 255 1.00 63 62 0 32 32 @AAAAaaaaaaaAaAaaaaaaAAAaaaAaaaaA point 0 missense TAC->TTC[Tyr->Phe] {F41E7.6} 5369 CB6878_redo X 10333093 1 G A 255 1.00 63 62 0 23 23 @AAaaaAAaaAAAAaAAAaAAaaa point 0 nongenic,nongenic -1287 upstream,852 downstream {R07E3.4},{R07E3.3} 5381 CB6878_redo X 10421428 1 G A 255 1.00 63 62 0 39 39 @aAaAaAaaAaAaaAaAAaaAaaAaaaAaAaaAAAaaaaA point 0 SNP none {haw106854} 5382 CB6878_redo X 10439131 1 C T 255 1.00 63 62 0 41 41 @tTtttttTTTTtttTttTttTttTtttttttttTttTTtTT point 0 SNP none {haw106868} 5383 CB6878_redo X 10473878 1 G A 255 1.00 63 62 0 18 18 @AAaaAAAAaAAAAaaAaA point 0 SNP none {haw106890} 5384 CB6878_redo X 10485896 1 T C 255 1.00 63 62 0 41 41 @CCCccCcccccccCCCccCCCCcCCccccccCcccccCCCc point 0 missense GTT->GCT[Val->Ala] {C33D3.3} 5385 CB6878_redo X 10591190 1 G T 255 1.00 63 62 0 32 32 @TTtttTtTTtTttTTTttTTTTTtTtTTTttT point 0 SNP none {haw106989} 5386 CB6878_redo X 10636437 1 C A 255 1.00 63 62 0 23 23 @aAaaAaAAaAaAAAAaAaAAaAA point 0 nongenic,nongenic -7702 upstream,-7898 upstream {M79.2},{F11A1.3a} 5387 CB6878_redo X 10787934 1 G A 255 1.00 63 62 0 20 20 @AaaAaAAAAAAAAAaaaaAA point 0 missense GCA->ACA[Ala->Thr] {T05A10.3} 5389 CB6878_redo X 10845087 1 T C 190 1.00 63 62 0 14 14 @CCCCCCCCCCCCCC point 0 nongenic -485 upstream {C05A9.2} 5390 CB6878_redo X 10902060 1 A G 255 1.00 63 62 0 36 36 @ggGgGggGGGGgGGggggGgggGGggggGggggggG point 0 nongenic,nongenic -1144 upstream,-2016 upstream {F47B10.7},{F47B10.1.1} 5398 CB6878_redo X 11297615 1 C T 131 1.00 63 0 0 5 5 @tTTtt point 0 nongenic,nongenic -955 upstream,393 downstream {F08G12.10},{F08G12.2} 5399 CB6878_redo X 11297616 1 T G 125 1.00 63 0 0 4 4 @GGgg point 0 nongenic,nongenic -956 upstream,392 downstream {F08G12.10},{F08G12.2} 6377 CB6878_redo X 11492873 2 X X -1000 -999.99 -1000 -1000 6 -5 1 @.,,,,. indel -2 SNP none {uCE6-1222} 5409 CB6878_redo X 11564037 1 T A 42 1.00 63 62 2 4 6 @AAaa,. point 0 SNP none {uCE6-1225} 5410 CB6878_redo X 11600446 1 C A 255 1.00 63 62 0 16 16 @AaaaAaAaaaAAAaAA point 0 SNP none {haw107592} 5411 CB6878_redo X 11624629 1 T C 255 1.00 63 62 0 25 25 @cccccCccCCccccCccCcCccCCc point 0 missense,SNP GAT->GGT[Asp->Gly],none {Y71H9A.1},{haw107616} 5412 CB6878_redo X 11689185 1 A T 15 1.00 63 24 2 3 5 @..ttt point 0 nongenic,nongenic -1051 upstream,-990 upstream {C44C10.10},{C44C10.7} 5413 CB6878_redo X 11689186 1 T G 25 1.00 63 14 2 3 5 @..ggg point 0 nongenic,nongenic -1050 upstream,-991 upstream {C44C10.10},{C44C10.7} 5414 CB6878_redo X 11690021 1 A C 4 1.00 63 50 2 3 5 @,.CCC point 0 nongenic,nongenic -1826 upstream,-215 upstream {C44C10.7},{C44C10.10} 5415 CB6878_redo X 11699536 1 G A 255 1.00 63 62 0 24 24 @AAAAaaaaAAaaaaAAaaaAaAAa point 0 nongenic,nongenic -2923 upstream,514 downstream {C44C10.3},{C44C10.6} 5443 CB6878_redo X 11831508 1 C A 222 2.81 63 62 0 11 11 @AAaAAAaaaAA point 0 nongenic 4532 into {C34E11.3} 5444 CB6878_redo X 11831549 1 T C 255 2.69 63 62 1 26 27 @c,CCCCCcCCCCCccCCccCCCCCCCC point 0 nongenic 4491 into {C34E11.3} 5445 CB6878_redo X 11878515 1 G A 194 1.00 63 62 0 8 8 @aAaAAaAa point 0 nongenic,nongenic -395 upstream,517 downstream {Y62H9A.2},{Y62H9A.3} 5455 CB6878_redo X 12023120 1 C A 255 2.56 63 62 0 24 24 @AAaaAaAaaAaAaAAAaaAAaAaA point 0 nongenic -6629 upstream {B0198.2} 5457 CB6878_redo X 12088979 1 A T 255 1.00 63 62 0 18 18 @TTttttttTTttttTTTT point 0 nongenic,nongenic -8783 upstream,4028 into {W03G11.4.2},{W03G11.4.1} 5458 CB6878_redo X 12114467 1 G A 255 1.00 63 62 0 17 17 @aAaaAaaAaaaaaAAAA point 0 nongenic,nongenic -4095 upstream,221 into {T01H10.5},{T01H10.3} 5459 CB6878_redo X 12116536 1 G C 255 1.00 63 62 0 33 33 @cCCCCCccccCCCcCCCCCCCCcCccCCccCCc point 0 nongenic,nongenic -2026 upstream,689 downstream {T01H10.5},{T01H10.3} 5465 CB6878_redo X 12234104 1 G A 255 1.00 63 62 0 17 17 @AaaAAaAAaaaaaAaAa point 0 nongenic -1439 upstream {C23H4.6a} 5469 CB6878_redo X 12277026 1 C A 125 1.00 63 62 0 5 5 @aaaaa point 0 nongenic,nongenic -1425 upstream,-3603 upstream {C04B4.6},{C04B4.1.1} 5470 CB6878_redo X 12277112 1 A G 255 1.00 38 62 0 20 20 @gGGGGGggGGggggGGgGGG point 0 nongenic,nongenic -1511 upstream,-3517 upstream {C04B4.6},{C04B4.1.1} 5471 CB6878_redo X 12277116 1 A T 255 1.00 63 62 0 25 25 @tTTTTTttTTttttTTtTTTTTTTT point 0 nongenic,nongenic -1515 upstream,-3513 upstream {C04B4.6},{C04B4.1.1} 5472 CB6878_redo X 12277171 1 A T 252 1.19 63 62 0 23 23 @TTTTTTTTTtTTtTTTtTTTTTT point 0 nongenic,nongenic -1570 upstream,-3458 upstream {C04B4.6},{C04B4.1.1} 5475 CB6878_redo X 12277519 1 A G 20 4.38 63 62 138 117 255 @,G,,.gG..GG,,G..gGGgggg,,,GG,.GG,,,G,G,.gGGGGG,GG,ggGG,,G,GG,GGGG,g..gGGGGGGGGGGGGG,G.gG,,G,GG,,GG. point 0 nongenic,nongenic -1918 upstream,-3110 upstream {C04B4.6},{C04B4.1.1} 5476 CB6878_redo X 12277570 1 C T 19 5.12 63 62 70 109 179 @,T.tTTttt.,,,TTTtT,Tttt.t...tttTTttTT.TTTttt.,,Tttt.TTTt..tTt.tTT,.t..ttttTttt..tttt.tt.,.tt.TT,tt. point 0 nongenic,nongenic -1969 upstream,-3059 upstream {C04B4.6},{C04B4.1.1} 5477 CB6878_redo X 12277622 1 T G 255 1.06 63 62 0 74 74 @ggggggGGGggGgggGGGGGgggGggGGGGggggggGGGggGGgggGGgGgggggggGGgggggGGgggGgggg point 0 nongenic,nongenic -2021 upstream,-3007 upstream {C04B4.6},{C04B4.1.1} 5480 CB6878_redo X 12277788 1 C T 9 2.12 40 0 17 25 42 @T,TT,T,TTTTTT,,T,TTt,,TTT,t,,,T,TTTTTT,,,, point 0 nongenic,nongenic -2187 upstream,-2841 upstream {C04B4.6},{C04B4.1.1} 5482 CB6878_redo X 12277811 1 A G 3 2.12 0 2 8 25 33 @GGGGGGG,GG,,,gG,G,GgGGGgG,G,GgGgG point 0 nongenic,nongenic -2210 upstream,-2818 upstream {C04B4.6},{C04B4.1.1} 5485 CB6878_redo X 12278048 1 C A 160 4.31 63 52 3 17 20 @,AAAaaAAAaAaaAaAAa,, point 0 nongenic,nongenic -2447 upstream,-2581 upstream {C04B4.6},{C04B4.1.1} 5490 CB6878_redo X 12278279 1 C T 3 3.00 0 0 0 5 5 @tGttt point 0 nongenic,nongenic -2350 upstream,-2678 upstream {C04B4.1.1},{C04B4.6} 5491 CB6878_redo X 12278330 1 A C 4 9.56 12 4 1 17 18 @CCcC,CCcCcCCtttctT point 0 nongenic,nongenic -2299 upstream,-2729 upstream {C04B4.1.1},{C04B4.6} 5496 CB6878_redo X 12416665 1 C T 61 1.00 63 4 1 4 5 @tttt. point 0 nongenic,nongenic -2716 upstream,-9059 upstream {F17E5.1a},{T24D3.2.2} 5497 CB6878_redo X 12416668 1 T A 4 1.00 63 60 2 3 5 @aaa., point 0 nongenic,nongenic -2719 upstream,-9056 upstream {F17E5.1a},{T24D3.2.2} 5498 CB6878_redo X 12520011 1 G A 255 1.00 63 62 0 13 13 @AAaaaAAaaaaaa point 0 nongenic -6040 upstream {H20J18.1a.1,H20J18.1b.1} 5499 CB6878_redo X 12520188 1 G C 3 1.00 63 2 1 3 4 @C,Cc point 0 nongenic -6217 upstream {H20J18.1a.1,H20J18.1b.1} 5500 CB6878_redo X 12520191 1 T C 4 1.00 63 0 0 5 5 @CCCgc point 0 nongenic -6220 upstream {H20J18.1a.1,H20J18.1b.1} 5503 CB6878_redo X 12560995 1 T C 124 1.00 63 62 0 5 5 @CCCCC point 0 nongenic,nongenic -12995 upstream,-9395 upstream {T24D5.1},{C16D6.2} 5506 CB6878_redo X 12651049 1 G A 255 1.00 63 62 0 26 26 @AAaaAaaaaAaaAaAAaaaaAAaaaa point 0 missense GCA->ACA[Ala->Thr] {H36L18.1} 5508 CB6878_redo X 12667067 1 C T 26 1.00 63 0 1 4 5 @,tTtt point 0 nongenic,nongenic,nongenic -11683 upstream,-3522 upstream,707 into {C02B4.1},{C02B4.4},{C02B4.2} 5509 CB6878_redo X 12689224 1 T A 255 1.00 63 62 0 19 19 @aAAAaAAAaaaaAAAaAAa point 0 nongenic,nongenic -2304 upstream,25 downstream {T07C5.1b},{C02B4.1} 5510 CB6878_redo X 12701755 1 G A 75 1.56 63 32 2 6 8 @AaaaaA.. point 0 silent TTC->TTT[Phe->Phe] {T07C5.3a,T07C5.3b} 5512 CB6878_redo X 12786146 1 G C 255 1.00 63 62 0 26 26 @cCCccCcCCCcCcccCCCcCCcCcCc point 0 missense,SNP TGG->TGC[Trp->Cys],none {T22H6.2a,T22H6.2b},{haw107989} 5513 CB6878_redo X 12795967 1 C A 255 1.00 63 62 0 33 33 @AaAaAaAaaaaaAaAaaaaAAaAaaAAaaaaaa point 0 SNP,three_prime_UTR none,none {haw107990},{T22H6.6a,T22H6.6b} 5515 CB6878_redo X 12961567 1 G A 255 1.00 63 62 0 34 34 @AAAAaaAAAaAaaaAAAaAAaaaAaaaaaaaAaa point 0 nongenic,nongenic -15083 upstream,-3838 upstream {C05E7.3},{C05E7.4} 5516 CB6878_redo X 13006485 1 T C 47 1.00 63 40 3 4 7 @.,,CCcc point 0 nongenic -1929 upstream {F11C1.6a.1,F11C1.6b.2} 5517 CB6878_redo X 13034301 1 T A 255 1.00 63 62 0 20 20 @aAAAaaaaAaAaaaaaaAaa point 0 SNP none {haw108272} 5518 CB6878_redo X 13041027 1 A C 63 1.00 63 62 1 3 4 @Ccc, point 0 SNP none {haw108284} 5522 CB6878_redo X 13257849 1 G A 255 1.00 63 62 0 26 26 @AaAAAAaAAaaAAaAaaaaAaAaaAa point 0 nongenic -1324 upstream {K08H2.10} 5525 CB6878_redo X 13327764 1 G A 255 1.00 63 62 0 26 26 @AAAaaAaaaAAaAaAaaaaAaaAAAA point 0 three_prime_UTR none {F46G10.2} 5526 CB6878_redo X 13380536 1 A T 16 1.00 63 62 4 5 9 @TtTTt.... point 0 nongenic -3621 upstream {C49F8.2} 5527 CB6878_redo X 13381744 1 G A 255 1.00 63 62 0 21 21 @AAAAaAAAAaaAaaAAAAaAa point 0 nongenic -4829 upstream {C49F8.2} 5528 CB6878_redo X 13384402 1 T A 255 1.00 63 62 0 22 22 @aaAAAaaAAAaAaaAAAAaaAA point 0 SNP none {haw108496} 5530 CB6878_redo X 13406089 1 G A 255 1.00 63 62 0 33 33 @AaaAaAAaAAAAAAaAAaAAaaAAAAAAaaaaA point 0 missense GGA->AGA[Gly->Arg] {F02C12.1} 5531 CB6878_redo X 13437208 1 C T 176 2.56 63 62 0 12 12 @tttttttttttt point 0 nongenic,nongenic -5688 upstream,832 into {C29F7.5},{C29F7.6} 5532 CB6878_redo X 13467336 1 C T 255 1.00 63 62 0 29 29 @tTTttTtTttTTTTTtTTTtTTTTtTTTT point 0 missense GGA->GAA[Gly->Glu] {F02D10.1} 5533 CB6878_redo X 13480349 1 T A 255 1.00 63 62 0 27 27 @aAAaaAaaaaaAAaAaAaaAaAAAaAa point 0 missense,SNP AAC->ATC[Asn->Ile],none {F15A2.4},{haw108526,uCE6-1345} 6387 CB6878_redo X 13481140 1 X X -1000 -999.99 -1000 -1000 6 -4 2 @.,,... indel -1 SNP none {uCE6-1346} 5540 CB6878_redo X 13582268 1 G A 255 1.00 63 62 0 40 40 @AaaaAAAaaaaaaaaaAAAAAaAaAAaAAaAAaAAaaAAA point 0 premature_stop TGG->TGA[Trp->stop] {F54B11.10} 5541 CB6878_redo X 13638145 1 T A 255 1.00 63 62 0 18 18 @aAAaaAaAaAaAAAaAAa point 0 nongenic,nongenic -1652 upstream,-7106 upstream {C40C9.1},{C40C9.5a} 5542 CB6878_redo X 13645291 1 G A 255 1.00 63 62 0 19 19 @AaaaaAAAAAaaaAaaaaA point 0 missense CCG->TCG[Pro->Ser] {C40C9.2} 5543 CB6878_redo X 13649405 1 A C 25 8.50 59 0 2 2 4 @..cc point 0 nongenic -1763 upstream {C40C9.4} 5549 CB6878_redo X 13652600 1 C T 78 1.00 63 62 1 3 4 @,ttt point 0 nongenic,nongenic -7839 upstream,941 downstream {C04A11.1},{C40C9.4} 5550 CB6878_redo X 13652601 1 G C 77 1.00 63 62 0 4 4 @Tccc point 0 nongenic,nongenic -7838 upstream,942 downstream {C04A11.1},{C40C9.4} 5551 CB6878_redo X 13708213 1 T G 12 1.00 63 28 2 5 7 @,G,gggG point 0 nongenic,nongenic 429 downstream,654 downstream {K02D3.2},{K02D3.1} 5552 CB6878_redo X 13737752 1 G T 255 1.00 63 62 0 23 23 @TTTttTTtttTTtTTtTtTttTT point 0 SNP none {haw108674,uCE6-1361} 5559 CB6878_redo X 13832413 1 C T 232 2.69 63 62 2 25 27 @tTtTtTt.ttTTt,TtttTTTtttTTt point 0 nongenic,nongenic -11247 upstream,-1936 upstream {F19D8.1},{F19D8.2} 5561 CB6878_redo X 13973579 1 G C 18 5.81 63 22 2 3 5 @,CCC. point 0 nongenic,nongenic -2002 upstream,-4088 upstream {F48F7.5},{F48F7.4} 5562 CB6878_redo X 14020246 1 C T 255 1.00 63 62 0 33 33 @tttttttTTTTtTtTTTttTTtTTTtTttttTt point 0 nongenic,nongenic -461 upstream,-7728 upstream {C04C11.1a},{C31E10.8} 5563 CB6878_redo X 14062783 1 A C 3 1.00 63 2 3 9 12 @...ccccccccc point 0 nongenic,nongenic,nongenic 1015 into,492 into,995 into {C33G3.1b.1},{C33G3.1a},{C33G3.1b.2} 5564 CB6878_redo X 14118935 1 A G 112 1.06 63 62 0 11 11 @TGGGGGGGGGG point 0 nongenic,nongenic -8867 upstream,1926 into {F28H6.4},{F28H6.6} 5567 CB6878_redo X 14185367 1 G A 255 1.00 63 62 0 23 23 @aaAAaaaaaaaaaAaaaaAAaAa point 0 missense CTT->TTT[Leu->Phe] {C37E2.4} 5568 CB6878_redo X 14229404 1 A T 247 1.31 63 62 1 16 17 @tttttTttttTttTtt, point 0 nongenic,nongenic 185 downstream,921 downstream {K04C1.6},{K06G5.2} 5569 CB6878_redo X 14248169 1 C A 255 1.00 63 62 0 22 22 @aaaaaaaAaAAaAaaaAaaaaa point 0 missense GAC->GAA[Asp->Glu] {K04C1.5} 5571 CB6878_redo X 14323174 1 A T 244 1.25 63 62 0 12 12 @TttTTTTtTtTT point 0 nongenic,nongenic,nongenic,nongenic -2854 upstream,-4518 upstream,245 into,3548 into {C11H1.9a,C11H1.9b},{C11H1.7},{C11H1.4b},{C11H1.4a} 5579 CB6878_redo X 14374963 1 G T 17 1.00 63 10 2 4 6 @,.TTtt point 0 nongenic -15976 upstream {K04G11.5} 5580 CB6878_redo X 14374964 1 T G 10 1.00 63 16 2 4 6 @,.GGgg point 0 nongenic -15977 upstream {K04G11.5} 5581 CB6878_redo X 14374967 1 A T 80 1.00 63 10 2 7 9 @,.TTttttt point 0 nongenic -15980 upstream {K04G11.5} 5582 CB6878_redo X 14375235 1 T C 173 1.00 63 62 0 6 6 @ccCCCc point 0 SNP none {uCE6-1407} 5583 CB6878_redo X 14379009 1 T C 49 6.88 63 46 0 7 7 @CCccCcc point 0 nongenic,nongenic -1757 upstream,-4162 upstream {Y60A9A.1},{Y60A9.3} 5584 CB6878_redo X 14381923 1 G A 255 1.00 63 62 1 27 28 @aA.aaaaaaAAAaaAaAaAAAaaaaaAa point 0 SNP none {haw109439} 5585 CB6878_redo X 14384687 1 A C 13 8.38 0 12 0 5 5 @ccccc point 0 nongenic 903 downstream {Y60A9.3} 5590 CB6878_redo X 14427614 1 T A 90 1.00 63 46 1 5 6 @,AaaaA point 0 nongenic,nongenic -6518 upstream,413 into {F23D12.8},{F23D12.1} 5591 CB6878_redo X 14434403 1 T C 22 1.00 63 44 2 4 6 @C,C,CC point 0 nongenic,nongenic,nongenic -6376 upstream,-8138 upstream,271 into {F23D12.1},{F23D12.3},{F23D12.8} 5594 CB6878_redo X 14510694 1 G A 178 3.50 63 62 0 11 11 @aaaaaaaaaaa point 0 nongenic,nongenic -6932 upstream,532 downstream {M163.1},{D1025.3} 5595 CB6878_redo X 14510701 1 T G 176 3.12 63 62 0 11 11 @ggggggggggg point 0 nongenic,nongenic -6939 upstream,525 downstream {M163.1},{D1025.3} 5596 CB6878_redo X 14540255 1 C T 255 1.00 63 62 0 31 31 @TTTttTTtTTtTTttTTTTTTTttTtTtTtt point 0 nongenic 351 downstream {T24C2.4} 5597 CB6878_redo X 14573705 1 G A 28 1.00 63 60 2 3 5 @,,AAA point 0 nongenic,nongenic,nongenic -4170 upstream,1066 into,4910 into {C44H4.2},{C44H4.1},{H01A20.2} 5598 CB6878_redo X 14573707 1 A G 61 1.00 63 28 1 4 5 @,GGGG point 0 nongenic,nongenic,nongenic -4168 upstream,1068 into,4912 into {C44H4.2},{C44H4.1},{H01A20.2} 5599 CB6878_redo X 14577774 1 T A 255 1.00 63 62 0 20 20 @AaaaaaaAaaAAaAaAaaAa point 0 nongenic,nongenic -101 upstream,6732 into {C44H4.2},{H01A20.2} 5600 CB6878_redo X 14613805 1 C A 255 1.00 63 62 0 36 36 @AaaaaaaaaAaaaaAaAAaaaaAAaaAAaAaAAaaa point 0 ncRNA,silent none,CGA->AGA[Arg->Arg] {F54E4.1b},{F54E4.1a} 6392 CB6878_redo X 14614978 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @,.,.cC indel 0 inframe,ncRNA none,none {F54E4.1a},{F54E4.1b} 5603 CB6878_redo X 14637664 1 A C 226 1.00 63 62 0 16 16 @CCCCCCCCCCCCCcCC point 0 nongenic -1335 upstream {F54E4.3} 5604 CB6878_redo X 14693204 1 C G 18 1.00 63 14 1 3 4 @GGg, point 0 nongenic -287 upstream {F40E10.2} 5605 CB6878_redo X 14693205 1 G C 15 1.00 63 18 1 3 4 @CCc, point 0 nongenic -288 upstream {F40E10.2} 5607 CB6878_redo X 14740646 1 C T 255 1.00 63 62 0 23 23 @tTTTtTtttTtttTTtTTttttt point 0 nongenic -636 upstream {C05G5.1} 5612 CB6878_redo X 14767044 1 C G 255 1.00 63 62 0 46 46 @GgggGGGgGgGggGgggGGGgGGGggGgGGGGGgGgggggggGGgG point 0 missense GAA->CAA[Glu->Gln] {Y16B4A.2} 5613 CB6878_redo X 14776055 1 A T 139 1.00 63 62 0 6 6 @TTTTTT point 0 nongenic,nongenic,nongenic -14871 upstream,-4282 upstream,2597 into {F42D1.2.1},{Y16B4A.2},{Y16B4A.1} 5614 CB6878_redo X 14806740 1 C T 255 1.00 63 62 0 36 36 @tTTtTttTtttttTTtTTtttTTtTTtTtTTTTttT point 0 nongenic -416 upstream {F42D1.4} 5615 CB6878_redo X 14841451 1 T A 255 1.00 63 62 0 15 15 @aaaaAaAaAaaAaaA point 0 nongenic -4406 upstream {C27C12.2} 5618 CB6878_redo X 14895330 1 T G 49 1.00 63 18 1 5 6 @AGGG.G point 0 nongenic,nongenic -3095 upstream,265 into {F31F6.7},{F31F6.6} 5624 CB6878_redo X 14913406 1 G T 255 1.00 63 62 0 25 25 @ttttTTTTTtTtTTtTtTTttttTT point 0 SNP none {haw110147} 5625 CB6878_redo X 14921904 1 G A 255 1.00 63 62 0 21 21 @aAaaaAaaaaaaaaaaaAAAa point 0 SNP none {haw110159} 5626 CB6878_redo X 14921912 1 A G 255 1.00 63 62 0 23 23 @GgggGgggggggggggGGGgGGG point 0 SNP none {haw110160} 5627 CB6878_redo X 14921945 1 T C 45 1.00 63 62 3 9 12 @.CCC.CC,cccc point 0 nongenic,nongenic -16762 upstream,1864 into {Y70D2A.2},{Y70D2A.1} 5629 CB6878_redo X 14945493 1 T C 255 1.00 63 62 0 13 13 @cCCcccCcccccC point 0 SNP none {haw110192} 5630 CB6878_redo X 14947970 1 T G 5 1.00 63 22 0 4 4 @GGGc point 0 nongenic -1732 upstream {F14F4.3a,F14F4.3b} 5632 CB6878_redo X 14962448 1 A T 163 1.00 63 62 1 12 13 @GTTttt,TttTtt point 0 nongenic,nongenic -393 upstream,-995 upstream {F45B8.2},{F45B8.3} 5633 CB6878_redo X 14978686 1 A T 28 1.00 63 30 3 5 8 @tTtTT,.. point 0 nongenic,nongenic,nongenic -607 upstream,-921 upstream,53 downstream {F20D1.10.1},{F20D1.10.2},{F20D1.3} 5634 CB6878_redo X 14978687 1 T A 40 1.00 63 28 2 6 8 @aAaAAA.. point 0 nongenic,nongenic,nongenic -606 upstream,-920 upstream,54 downstream {F20D1.10.1},{F20D1.10.2},{F20D1.3} 5635 CB6878_redo X 14978688 1 A C 30 1.00 63 28 2 5 7 @CcCCC.. point 0 nongenic,nongenic,nongenic -605 upstream,-919 upstream,55 downstream {F20D1.10.1},{F20D1.10.2},{F20D1.3} 5636 CB6878_redo X 15068602 1 G A 255 1.00 63 62 0 25 25 @AAaaaaAaAAAAAAAAaAAAAaAaa point 0 nongenic,nongenic -8307 upstream,661 into {H03G16.4},{H03G16.2} 5637 CB6878_redo X 15076185 1 C T 255 1.00 63 62 0 20 20 @TttttTTtTTTtTtTTtTTt point 0 missense AGT->AAT[Ser->Asn] {H40L08.3} 5639 CB6878_redo X 15126031 1 G A 255 1.00 63 62 0 21 21 @aAaaaAaaaAAAAaAAaAaAa point 0 nongenic,nongenic -9492 upstream,4878 into {R07D5.2},{R07D5.1} 5641 CB6878_redo X 15205140 1 G A 255 1.00 63 62 0 39 39 @AAAAAAAaAAaaAAAaaaaAaAAAaAaaAaaAaaAAAaA point 0 nongenic -6082 upstream {T10B10.5} 5646 CB6878_redo X 15215083 1 G A 255 1.00 63 62 0 22 22 @aAAaAAaaAaaaAAAAaAAAAa point 0 nongenic -1902 upstream {H03A11.1} 5647 CB6878_redo X 15222945 1 C T 255 1.00 63 62 0 29 29 @TtTtTTtttTtTTtTTtTtTTtTtTTTtt point 0 nongenic -9764 upstream {H03A11.1} 5648 CB6878_redo X 15226797 1 G T 255 1.00 63 62 0 53 53 @tTTTtTttTtttTTtTTttTTTTtTtTtttTttttTTttTTtTttTTTTtTtT point 0 missense,SNP CCT->CAT[Pro->His],none {H03A11.2},{haw110591} 5649 CB6878_redo X 15226859 1 C T 217 5.38 54 62 25 28 53 @T,.,t,t,TTTTt,,,,T,t,T,t,,,,T,Tt,,,,,,,t,tTtttTTtTTTT point 0 silent AAG->AAA[Lys->Lys] {H03A11.2} 5650 CB6878_redo X 15229599 1 C T 255 1.00 63 62 0 28 28 @TTttTtTtGTTTttTttttttTTtTttt point 0 missense GCA->ACA[Ala->Thr] {H03A11.2} 5651 CB6878_redo X 15252192 1 G A 255 1.00 63 62 0 21 21 @aaaAAaaaaAAaAAAAAAAAa point 0 nongenic,nongenic -5325 upstream,-5905 upstream {F46F2.4},{F39B1.1} 5652 CB6878_redo X 15252247 1 A T 255 1.00 63 62 0 29 29 @ttttttTTTTtTTtTTtttttTTttTTtt point 0 SNP none {haw110617,snp_F46F2[2]} 5653 CB6878_redo X 15343524 1 G C 255 1.00 63 62 0 37 37 @tccCcCCcCCccccccCccCccCCcccCcCCcCcCCc point 0 three_prime_UTR none {Y15E3A.5} 5654 CB6878_redo X 15347258 1 G A 255 1.38 63 62 0 26 26 @AAAAaaAAAAAaAaaAAAaaAAAAAA point 0 nongenic -7900 upstream {C33A11.1.1,C33A11.1.2} 5659 CB6878_redo X 15418430 1 A T 255 1.00 63 62 0 24 24 @tTttTTtTTTTTTttTtTTTTTTT point 0 nongenic,nongenic,nongenic -3015 upstream,-3984 upstream,542 into {F39D8.1b},{F39D8.3},{F39D8.2a,F39D8.2b} 5662 CB6878_redo X 15447753 1 C T 197 1.06 63 62 0 19 19 @TTTTTTTTTTTTTTTTTTT point 0 nongenic,nongenic -14011 upstream,1103 into {R03A10.6.1},{R03A10.5} 5664 CB6878_redo X 15472090 1 A T 133 7.31 63 62 0 14 14 @ttTtttttttTttt point 0 nongenic,nongenic -6848 upstream,1374 into {C46E1.2},{C46E1.3} 5668 CB6878_redo X 15520197 1 A G 255 1.00 63 62 0 16 16 @ggggGgGgGGGgGgGg point 0 ncRNA none {H30A04.1c} 5676 CB6878_redo X 15722216 1 A G 255 1.00 63 62 0 22 22 @GGGGgGgGgGggGGgGGggGgg point 0 nongenic,nongenic -3834 upstream,1025 into {ZK662.4.1,ZK662.4.2},{ZK662.5} 5677 CB6878_redo X 15747994 1 C G 222 4.69 63 62 0 14 14 @Gggggggggggggg point 0 ncRNA none {ZK678.t2} 5678 CB6878_redo X 15747996 1 A G 223 4.69 63 62 0 14 14 @Gggggggggggggg point 0 ncRNA none {ZK678.t2} 5696 CB6878_redo X 15816874 1 A T 30 1.00 63 62 2 4 6 @tTTT., point 0 nongenic -4468 upstream {Y7A5A.8} 5697 CB6878_redo X 15820219 1 A T 255 1.00 63 62 0 21 21 @TtTtttTttttttTTtttTTT point 0 nongenic -1123 upstream {Y7A5A.8} 5698 CB6878_redo X 15836084 1 A G 179 1.56 63 62 0 14 14 @GGGGGGGGGGGGGG point 0 nongenic,nongenic -5408 upstream,2112 into {F59F4.2},{F59F4.1} 5699 CB6878_redo X 15836927 1 T C 255 1.00 63 62 0 34 34 @CcCccCCCCcCCCCCCccCcCCcCcccccCcccc point 0 missense ACA->GCA[Thr->Ala] {F59F4.1} 5700 CB6878_redo X 15870424 1 A C 255 6.88 63 62 3 18 21 @CCCccc,Cccc,ccc,cCCCC point 0 nongenic -11596 upstream {F53H4.5} 5701 CB6878_redo X 15876345 1 G A 255 1.00 63 62 0 20 20 @AAAAaaaAAaAaAaaaaaaa point 0 nongenic -5675 upstream {F53H4.5} 5702 CB6878_redo X 15887437 1 G A 255 1.00 63 62 0 24 24 @aaaAaaAaaAaaaaaAAaaAaAaa point 0 missense TCT->TTT[Ser->Phe] {F53H4.3} 5703 CB6878_redo X 15904379 1 C A 255 1.00 63 62 0 30 30 @AAaaaaAAaaaAaaaaAAaaAAaaaaaaAA point 0 nongenic,nongenic -16871 upstream,-6178 upstream {F53H4.3},{F31B9.1} 5704 CB6878_redo X 15904380 1 A C 255 1.00 63 62 0 29 29 @CccccCCcccCccccCCccCCccccccCC point 0 SNP none {haw111415} 5706 CB6878_redo X 15904862 1 T A 121 1.00 63 62 0 4 4 @aAAA point 0 nongenic,nongenic -17354 upstream,-5695 upstream {F53H4.3},{F31B9.1} 5707 CB6878_redo X 15945619 1 A T 255 1.00 63 62 0 24 24 @TtTTTtTTTTtTTTTtTTTtTTtT point 0 SNP none {haw111469} 5708 CB6878_redo X 15945743 1 G T 249 1.00 63 62 0 12 12 @tTTTTTttTtTt point 0 nongenic,nongenic,nongenic -6498 upstream,-6550 upstream,1815 into {E03G2.2},{E03G2.4},{E03G2.3} 5709 CB6878_redo X 15945744 1 G T 252 1.00 63 62 0 15 15 @tTTTTTttTtTtTTt point 0 nongenic,nongenic,nongenic -6499 upstream,-6549 upstream,1816 into {E03G2.2},{E03G2.4},{E03G2.3} 5710 CB6878_redo X 15945755 1 A T 255 1.00 63 62 0 14 14 @tTtTTtTTTtTTtt point 0 nongenic,nongenic,nongenic -6510 upstream,-6538 upstream,1827 into {E03G2.2},{E03G2.4},{E03G2.3} 5711 CB6878_redo X 15965539 1 G A 255 1.00 63 62 0 18 18 @AAAaaaaaAAAaAAaAaa point 0 nongenic 491 downstream {C09G1.1} 5712 CB6878_redo X 16001006 1 G A 255 1.06 63 62 0 25 25 @AAaAAaAaaaaaAAAaAaAaaAAAA point 0 nongenic -4150 upstream {C09G1.4} 5713 CB6878_redo X 16010916 1 G T 255 1.00 63 62 0 23 23 @ttTTTTttttttTttTttttTTT point 0 SNP none {haw111536} 5714 CB6878_redo X 16010919 1 C A 255 1.00 63 62 0 24 24 @aAAAAaaaaaaAaaAaaaaAAAAA point 0 nongenic -14063 upstream {C09G1.4} 5715 CB6878_redo X 16029144 1 A C 168 1.00 63 62 0 9 9 @ccccccccc point 0 nongenic -1579 upstream {B0395.2} 5716 CB6878_redo X 16029151 1 T C 146 0.00 63 62 0 7 7 @ccccccc point 0 nongenic -1572 upstream {B0395.2} 5717 CB6878_redo X 16029172 1 C T 111 1.00 63 62 0 5 5 @TTTTT point 0 nongenic -1551 upstream {B0395.2} 5718 CB6878_redo X 16073852 1 T A 255 1.00 63 62 0 14 14 @AaaAaaAaaAAAaA point 0 SNP none {haw111571,pas35293} 5719 CB6878_redo X 16102626 1 T G 255 1.00 63 62 0 17 17 @GgGGgGgGGgggcGGgG point 0 SNP none {CE6-235,haw111583} 5720 CB6878_redo X 16114821 1 C T 255 1.00 63 62 0 19 19 @tTTTtTtTttTtTtTtTtt point 0 nongenic 8849 into {ZK1073.2} 5722 CB6878_redo X 16139925 1 G A 255 1.00 63 62 0 30 30 @AaAAAaAAaAAaAAAaAAaaaaaaAAaAaA point 0 nongenic,nongenic -11140 upstream,506 downstream {ZK1073.1.1},{F09C8.2.1} 5723 CB6878_redo X 16140449 1 T C 255 1.00 63 62 1 17 18 @CCccCCCc,cccCcccCC point 0 SNP,three_prime_UTR none,none {haw111604,pas34987},{F09C8.2.1} 5742 CB6878_redo X 16255156 1 G T 255 1.00 63 62 0 17 17 @tttttttTttTTTTTtT point 0 nongenic,nongenic 226 into,398 into {W10G6.2a.2,W10G6.2b},{W10G6.2a.1} 5743 CB6878_redo X 16255668 1 T G 253 8.38 63 62 0 13 13 @GGGGGgggGGGGG point 0 nongenic,nongenic 738 into,910 into {W10G6.2a.2,W10G6.2b},{W10G6.2a.1} 5744 CB6878_redo X 16255669 1 T C 251 7.69 63 62 0 12 12 @CCCCcccCCCCC point 0 nongenic,nongenic 739 into,911 into {W10G6.2a.2,W10G6.2b},{W10G6.2a.1} 5745 CB6878_redo X 16255728 1 T C 120 1.69 63 62 0 6 6 @CCCCCC point 0 nongenic,nongenic 798 into,970 into {W10G6.2a.2,W10G6.2b},{W10G6.2a.1} 5746 CB6878_redo X 16255860 1 T A 255 1.00 63 62 0 16 16 @AAaAAaaAaAAaAaaa point 0 SNP none {haw111737} 5748 CB6878_redo X 16256026 1 T C 18 1.00 63 10 1 3 4 @.CcC point 0 nongenic,nongenic 1096 into,1268 into {W10G6.2a.2,W10G6.2b},{W10G6.2a.1} 5749 CB6878_redo X 16269929 1 G A 255 1.00 63 62 1 32 33 @aaaaaAaaAaaAAaaaAAAaaaAaAAaaaaa.a point 0 missense CGG->TGG[Arg->Trp] {F52E10.5} 5751 CB6878_redo X 16322182 1 G A 255 1.00 63 62 0 24 24 @aaaAaaAaaAAaAaAAaAaAaAAA point 0 nongenic,nongenic -4532 upstream,-6952 upstream {T01B4.3},{C11G6.2} 5752 CB6878_redo X 16336597 1 A G 255 1.00 63 62 0 19 19 @GGggGGggGggggGggggG point 0 nongenic,nongenic -4033 upstream,738 downstream {C11G6.3},{C11G6.1} 5753 CB6878_redo X 16417762 1 C G 255 1.00 63 62 0 20 20 @ggggGggGgGgGGGggGgGG point 0 SNP none {pas35160} 5754 CB6878_redo X 16457888 1 A G 255 1.00 63 62 0 25 25 @ggGggGgGGGGGGGGggggggGGgg point 0 nongenic,nongenic -13400 upstream,580 into {F38E9.1},{F38E9.2} 5755 CB6878_redo X 16460133 1 C A 255 1.00 63 62 0 27 27 @aaAaAaaaaAaaaaaaaaaAaaaAAAA point 0 SNP none {haw111863} 5756 CB6878_redo X 16460180 1 C A 255 1.00 63 62 0 20 20 @AAAAaAAaaAAaAaaaaaaA point 0 SNP none {haw111864} 5758 CB6878_redo X 16567010 1 C T 255 1.00 63 62 0 26 26 @tTtTTTTttttttttTTTTTtTTTTT point 0 nongenic -12629 upstream {F59C12.2a,F59C12.2b} 5760 CB6878_redo X 16608719 1 G A 126 1.00 63 62 1 8 9 @,aAAaAAAa point 0 nongenic,nongenic,nongenic -4646 upstream,-6084 upstream,723 into {C06G1.4.1},{F59C12.4},{F59C12.3} 5762 CB6878_redo X 16687504 1 A G 111 1.12 63 62 5 11 16 @,..C,,GGggGGgggg point 0 nongenic,nongenic -1879 upstream,825 into {F22H10.4},{F22H10.5} 5763 CB6878_redo X 16716972 1 G A 255 1.00 63 62 0 20 20 @AAAAaaaaaAaaAaAaAaaA point 0 nongenic,nongenic -1487 upstream,3604 into {T21F2.1b},{T21F2.1a} 5764 CB6878_redo X 16718952 1 G A 255 1.00 63 62 0 30 30 @AAaAaaAAaaAAAaAAAaAAAAAAAaaAaA point 0 five_prime_UTR,missense none,GTA->ATA[Val->Ile] {T21F2.1b},{T21F2.1a} 5765 CB6878_redo X 16787261 1 A T 255 1.00 63 62 0 36 36 @TTTTtTTtTTTTTttTTtTtTTTTTTTTtTTTtTTt point 0 SNP none {haw111929} 5766 CB6878_redo X 16817032 1 T C 229 1.00 63 62 0 29 29 @CCcccCcCCCCCCcccccccCCCcCcccC point 0 missense AAA->GAA[Lys->Glu] {F41G4.3a,F41G4.3b} 5775 CB6878_redo X 16949053 1 G A 255 1.00 63 62 0 37 37 @AAAAAaAaaAAaaaaaaaAAAAaAaaaaAAaAaAaaA point 0 silent TAC->TAT[Tyr->Tyr] {F52G3.4} 5777 CB6878_redo X 16975579 1 C T 255 1.00 63 62 0 23 23 @TtttTtttTTTtTTtttttTTtT point 0 nongenic,nongenic -26068 upstream,469 into {K02H8.1,K02H8.1b,K02H8.1c},{F52G3.5} 5778 CB6878_redo X 16981399 1 A C 100 0.00 63 62 0 5 5 @CCCCC point 0 nongenic,nongenic -20248 upstream,-5351 upstream {K02H8.1,K02H8.1b,K02H8.1c},{F52G3.5} 5779 CB6878_redo X 16981415 1 T C 118 1.00 63 62 0 6 6 @CCCCCC point 0 SNP none {haw111956} 5780 CB6878_redo X 17002117 1 C T 255 1.00 63 62 0 34 34 @ttTtTTTtttTTTTTtTttTTtTttTTtTttTtt point 0 nongenic,nongenic,nongenic -11261 upstream,-26069 upstream,470 into {F35B3.3},{F52G3.5},{K02H8.1,K02H8.1b,K02H8.1c} 5781 CB6878_redo X 17025320 1 A T 170 1.00 63 62 0 7 7 @TTTTTtT point 0 nongenic,nongenic,nongenic -4597 upstream,1098 into,3583 into {F35B3.4},{F35B3.5b},{F35B3.5a} 5782 CB6878_redo X 17047302 1 C T 255 1.00 63 62 0 16 16 @tTTtTtTtTTTTTTTT point 0 missense GAG->AAG[Glu->Lys] {C30G4.3.1,C30G4.3.2} 5783 CB6878_redo X 17047309 1 T C 250 1.00 63 62 0 17 17 @CcCcCcCCCCCCCCCCC point 0 silent GAA->GAG[Glu->Glu] {C30G4.3.1,C30G4.3.2} 5784 CB6878_redo X 17047323 1 G T 206 1.00 63 62 0 14 14 @TTTTTTTTTTTTtT point 0 missense CAG->AAG[Gln->Lys] {C30G4.3.1,C30G4.3.2} 5785 CB6878_redo X 17086380 1 C A 40 1.00 63 62 0 4 4 @AAGg point 0 SNP none {haw111973} 5787 CB6878_redo X 17097607 1 T A 255 1.00 63 62 0 19 19 @AaaaaAaAaaAAaaaaaaa point 0 SNP none {haw111984,pas37283} 5788 CB6878_redo X 17105478 1 G C 255 1.00 63 62 0 15 15 @CCCcCCCcccccccc point 0 nongenic -690 upstream {C08A9.8} 5789 CB6878_redo X 17168879 1 A G 170 1.00 63 62 0 10 10 @GGGGGGGGGG point 0 nongenic -11005 upstream {T23C6.5} 5796 CB6878_redo X 17328139 1 G A 255 1.00 63 62 0 28 28 @AAAaaAAAaaaaaaaAAAaAAAAAAAaA point 0 nongenic -5898 upstream {C53C11.5} 5797 CB6878_redo X 17333299 1 G A 255 1.00 63 62 0 25 25 @aaaAaaAAaAAAaaAaaaaAAaaAA point 0 nongenic -738 upstream {C53C11.5} 5798 CB6878_redo X 17359411 1 G A 255 1.00 63 62 0 27 27 @AAaaaaaaaaaaaAaAaaaaaAaAaaA point 0 nongenic -273 upstream {F10D7.1} 5799 CB6878_redo X 17378484 1 A G 52 1.00 63 42 2 3 5 @ggg.. point 0 nongenic,nongenic -3691 upstream,62 downstream {F10D7.3},{F10D7.4} 5801 CB6878_redo X 17442934 1 A G 255 6.88 63 62 22 32 54 @GGGgggGGgGGGGGgGGgGGGGGGGGG.GGGGg..................... point 0 nongenic -9372 upstream {C36E6.2} 6409 CB6878_redo X 17443243 0 X X -1000 -999.99 -1000 -1000 3 1 4 @,,,ccc indel 0 nongenic -9064 upstream {C36E6.2} 5818 CB6878_redo X 17444433 1 G T 4 7.31 0 16 0 5 5 @tTcTT point 0 nongenic -7873 upstream {C36E6.2} 5819 CB6878_redo X 17444481 1 G C 13 2.00 0 12 0 5 5 @CCCCC point 0 nongenic -7825 upstream {C36E6.2} 5820 CB6878_redo X 17445080 1 G A 79 10.00 27 62 12 32 44 @AAaaAAaaaaaaaAaAaaAaAAaAaAAAaaAa,,,,,,,,,,,. point 0 nongenic -7226 upstream {C36E6.2} 5837 CB6878_redo X 17621416 1 A T 255 1.00 63 62 0 14 14 @TTttttTtTTTtTt point 0 SNP none {haw112084} 5838 CB6878_redo X 17662636 1 G A 255 1.00 63 62 0 15 15 @AaaAAaAAaaaAaAa point 0 nongenic,nongenic -8305 upstream,266 into {T23E7.2a,T23E7.2b,T23E7.2c,T23E7.2e},{T23E7.4.1,T23E7.4.2} 5839 CB6878_redo X 17715334 1 G A 255 1.00 63 62 0 25 25 @AAAAAAAAAAaAaaaaAaaAAaAaa point 0 nongenic,nongenic,nongenic 455 into,457 into,589 downstream {cTel55X.1a.2,cTel55X.1b},{cTel55X.1a.1},{6R55.2}