id mutant_strain dna start length reference_base sample_base consensus_score loci_multiplicity mapping_quality neighbor_quality number_wildtype_reads number_variant_reads sequencing_depth sample_reads variant_type indel_size classes descriptions parent_features 3 CB6890_redo I 200948 1 A T 226 1.00 63 62 0 15 15 @ttttttttttttttt point 0 SNP none {haw293} 4 CB6890_redo I 200949 1 C T 228 1.00 63 62 0 16 16 @tttttttttttttttt point 0 SNP none {haw294} 5 CB6890_redo I 221158 1 A C 18 4.12 63 6 2 6 8 @CCCCCC,, point 0 nongenic,nongenic -597 upstream,90 downstream {Y48G1BL.5},{Y48G1BL.6} 6 CB6890_redo I 221159 1 C A 7 3.88 63 18 4 6 10 @AAAAAA,,.. point 0 nongenic,nongenic -598 upstream,89 downstream {Y48G1BL.5},{Y48G1BL.6} 9 CB6890_redo I 221540 1 T A 255 1.12 63 62 0 31 31 @AAAAaAaAAAAAaAAAAAaAaAaAaaAaaAa point 0 missense GAC->GTC[Asp->Val] {Y48G1BL.6} 10 CB6890_redo I 226602 1 T C 179 2.00 63 62 12 22 34 @CCCc.CC..C.CcCcC....CC.CCcC..c.ccc point 0 nongenic -5027 upstream {Y48G1BL.6} 15 CB6890_redo I 316117 1 T G 219 1.00 63 62 0 14 14 @GGGGGGGGGGGGGG point 0 SNP none {haw435,uCE1-530} 18 CB6890_redo I 361325 1 C A 255 1.00 63 62 0 19 19 @AAaAaaAAAAaaaaaaAaa point 0 missense AAG->AAT[Lys->Asn] {R119.1} 19 CB6890_redo I 369897 1 T C 255 1.19 63 62 0 25 25 @ccccccccccccccccccccCccCC point 0 nongenic 1525 into {R119.2} 21 CB6890_redo I 400428 1 C G 96 3.00 63 32 0 4 4 @GgGG point 0 nongenic,nongenic -6013 upstream,1535 into {R119.5},{Y50C1A.1} 27 CB6890_redo I 534186 1 T C 101 1.00 63 62 0 4 4 @aCcc point 0 nongenic -274 upstream {Y65B4BR.8} 29 CB6890_redo I 586304 1 T A 255 1.00 63 62 0 30 30 @AaAAaAaAaaAAAaAAAAAAaaAAAaAAAa point 0 nongenic,nongenic -2682 upstream,471 into {F56A6.5},{F56A6.2} 35 CB6890_redo I 636853 1 G A 255 1.00 63 62 0 17 17 @aaaaaAaaAaAaAaAaa point 0 five_prime_UTR none {Y65B4A.3} 38 CB6890_redo I 670353 1 T A 3 2.75 0 2 7 11 18 @,......Aaaaaaaaaaa point 0 nongenic,nongenic,nongenic -10063 upstream,-3502 upstream,2736 into {Y18H1A.11},{Y65B4A.9},{Y18H1A.14} 39 CB6890_redo I 670370 1 C T 16 1.00 0 16 0 10 10 @tttttttttt point 0 nongenic,nongenic,nongenic -10046 upstream,-3519 upstream,2753 into {Y18H1A.11},{Y65B4A.9},{Y18H1A.14} 40 CB6890_redo I 670375 1 G A 15 1.00 0 14 0 6 6 @aaaaaa point 0 nongenic,nongenic,nongenic -10041 upstream,-3524 upstream,2758 into {Y18H1A.11},{Y65B4A.9},{Y18H1A.14} 162975 CB6890_redo I 670393 108 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3916 to 4024 bp into {Y18H1A.14} 53 CB6890_redo I 732640 1 T G 255 1.00 63 62 0 27 27 @GggGgGGggGgGagGGGgggGGggGGg point 0 nongenic 658 into {Y18H1A.15} 6263 CB6890_redo I 774905 0 X X -1000 -999.99 -1000 -1000 3 2 5 @..,ttt indel 0 nongenic,nongenic,nongenic -1442 downstream,-1452 downstream,-28465 upstream {T06A4.1b},{T06A4.1a},{ZC123.3} 59 CB6890_redo I 818269 1 A G 3 1.00 63 4 0 8 8 @CCgcgtgc point 0 nongenic,nongenic -19728 upstream,14900 into {ZC123.1},{ZC123.3} 60 CB6890_redo I 818403 1 G C 22 1.00 63 24 1 3 4 @CCC, point 0 nongenic,nongenic -19594 upstream,15034 into {ZC123.1},{ZC123.3} 61 CB6890_redo I 818404 1 G C 25 1.00 63 22 1 3 4 @CCC, point 0 nongenic,nongenic -19593 upstream,15035 into {ZC123.1},{ZC123.3} 64 CB6890_redo I 924054 1 C T 180 3.12 34 62 2 9 11 @TtTTtTTTt., point 0 nongenic,nongenic,nongenic,nongenic -14430 upstream,-4904 upstream,2511 into,2826 into {Y95B8A.2},{Y95B8A.12a},{Y95B8A.12d,Y95B8A.12e},{Y95B8A.12c,Y95B8A.12f} 69 CB6890_redo I 947276 1 A C 27 1.00 63 62 1 4 5 @.cccc point 0 silent CCA->CCC[Pro->Pro] {Y95B8A.1} 70 CB6890_redo I 968802 1 G C 255 1.00 63 62 0 31 31 @CCccCccccCCCCCCcccCccCccccccccc point 0 nongenic,nongenic,nongenic,nongenic -11426 upstream,627 into,879 downstream,906 downstream {Y34D9B.1a},{F54A5.2},{F54A5.3a},{F54A5.3d} 74 CB6890_redo I 1028166 1 C T 122 1.19 63 62 0 5 5 @TtTTt point 0 nongenic 1747 into {Y34D9A.1} 75 CB6890_redo I 1028195 1 C T 255 1.06 63 62 0 14 14 @TtTTtTTTTtTTtt point 0 nongenic 1718 into {Y34D9A.1} 76 CB6890_redo I 1051604 1 A T 255 8.62 63 62 0 23 23 @TttTTttTttTtTTTtTtTTTtt point 0 nongenic,nongenic,nongenic 561 into,679 into,889 downstream {Y34D9A.8a},{Y34D9A.8b},{Y34D9A.6} 162976 CB6890_redo I 1059932 59 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 6911 to 6970 bp into {Y34D9A.10} 80 CB6890_redo I 1100872 1 T G 80 1.00 63 62 0 4 4 @Gggg point 0 nongenic,nongenic -5073 upstream,-6711 upstream {R06A10.4},{ZK993.2} 91 CB6890_redo I 1142103 1 C A 255 1.00 63 62 0 29 29 @aaaaaaaAaAaaaaAAAaAAAAAAaAAAA point 0 missense,SNP GGT->TGT[Gly->Cys],none {Y48G8AL.10},{haw1570} 93 CB6890_redo I 1146687 1 T G 6 7.75 63 4 1 3 4 @.ggg point 0 nongenic,nongenic -5663 upstream,4656 into {Y48G8AL.9},{Y48G8AL.10} 94 CB6890_redo I 1150705 1 A T 255 1.00 63 62 1 28 29 @TTttTTTtTttTTtttTTtTTTTT.tttt point 0 nongenic,nongenic -9681 upstream,3684 into {Y48G8AL.9},{Y48G8AL.10} 95 CB6890_redo I 1155867 1 T C 255 1.00 63 62 0 23 23 @CCCccCCcCCCcCCccccccCCC point 0 silent GGA->GGG[Gly->Gly] {Y48G8AL.14} 96 CB6890_redo I 1302563 1 G T 255 1.75 63 62 0 28 28 @tTtTtTTtTttttttttttTTTTTtTtt point 0 nongenic -3012 upstream {K12C11.4} 106 CB6890_redo I 1376720 1 G T 66 2.31 63 18 0 4 4 @tTtT point 0 nongenic 222 downstream {Y92H12BL.4} 126 CB6890_redo I 1418639 1 T C 255 7.19 63 62 0 25 25 @CcCccCCCCCCCCCCCCCCcCCCCC point 0 nongenic,nongenic -2829 upstream,2048 into {Y92H12BR.2},{Y92H12BR.3a,Y92H12BR.3b} 162977 CB6890_redo I 1440191 71 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3911 to 3982 bp into {Y92H12BR.8} 6266 CB6890_redo I 1498105 0 X X -1000 -999.99 -1000 -1000 1 0 1 @Gc, indel 4 nongenic,nongenic -16658 upstream,-6764 downstream {Y92H12A.4},{Y92H12A.5} 160 CB6890_redo I 1720362 1 A C 12 1.00 63 0 0 4 4 @cccc point 0 nongenic -1230 upstream {Y71G12B.11a,Y71G12B.11b} 161 CB6890_redo I 1720363 1 A C 15 1.00 63 0 0 6 6 @cccccc point 0 nongenic -1229 upstream {Y71G12B.11a,Y71G12B.11b} 169 CB6890_redo I 1746114 1 G A 121 1.00 63 48 0 4 4 @AAAA point 0 nongenic,nongenic -5367 upstream,4943 into {Y71G12B.10},{Y71G12B.24} 171 CB6890_redo I 1748231 1 G T 9 1.00 63 42 2 4 6 @TTTT,, point 0 nongenic,nongenic -3250 upstream,2826 into {Y71G12B.10},{Y71G12B.24} 176 CB6890_redo I 1864004 1 T C 255 1.12 63 62 0 32 32 @CCcCCcccCcCcCccCCCCcCCCCcCcCCccC point 0 SNP none {haw2851} 179 CB6890_redo I 1952117 1 C A 255 1.44 63 62 0 22 22 @AaaAaaAaAaaaaAaaAaAAaA point 0 nongenic,nongenic -9549 upstream,1519 into {Y51F10.11},{Y51F10.10} 182 CB6890_redo I 1971997 1 A G 3 1.00 63 0 1 9 10 @GGGGG.cgcc point 0 nongenic,nongenic -6008 upstream,1888 into {Y51F10.2},{Y51F10.3} 186 CB6890_redo I 1974061 1 T A 244 1.00 63 62 0 12 12 @aaaaaAaaaaaa point 0 nongenic,nongenic -3944 upstream,176 downstream {Y51F10.2},{Y51F10.3} 191 CB6890_redo I 2033983 1 A G 171 1.00 63 62 3 10 13 @,.G,GgGggGGgg point 0 nongenic,nongenic 32 downstream,401 downstream {Y20F4.2},{Y20F4.4} 192 CB6890_redo I 2033985 1 G A 194 1.00 63 62 3 11 14 @,.A,AaAaaAAaaA point 0 nongenic,nongenic 34 downstream,399 downstream {Y20F4.2},{Y20F4.4} 194 CB6890_redo I 2114685 1 A C 3 1.00 63 62 4 13 17 @...ccccccccc.cccc point 0 nongenic,nongenic,nongenic,nongenic,nongenic -13906 upstream,-6053 upstream,1036 into,8745 into,900 into {Y37E3.17a,Y37E3.17b},{Y37E3.19},{Y37E3.16.1},{Y37E3.15a},{Y37E3.16.2} 195 CB6890_redo I 2114873 1 T G 63 1.12 63 2 0 10 10 @GGGGGGGGGG point 0 nongenic,nongenic,nongenic,nongenic,nongenic -13718 upstream,-6241 upstream,1088 into,1224 into,8557 into {Y37E3.17a,Y37E3.17b},{Y37E3.19},{Y37E3.16.2},{Y37E3.16.1},{Y37E3.15a} 197 CB6890_redo I 2160535 1 T A 84 1.00 63 14 3 5 8 @aAaaA... point 0 nongenic,nongenic -37444 upstream,492 into {W03F11.6b},{W03F11.6a,W03F11.6c,W03F11.6d} 198 CB6890_redo I 2160537 1 A T 14 1.00 63 62 4 5 9 @tTttT..., point 0 nongenic,nongenic -37442 upstream,494 into {W03F11.6b},{W03F11.6a,W03F11.6c,W03F11.6d} 201 CB6890_redo I 2329637 1 A G 21 1.06 63 20 2 14 16 @GGGGGGGGGGg,G,gg point 0 nongenic,nongenic -2383 upstream,519 into {Y39G10AR.15},{Y39G10AR.22} 202 CB6890_redo I 2332711 1 T A 255 1.00 63 62 0 35 35 @AAAAAaaaaAAaaAaAAaAAaaAAAAAaAAAaaaA point 0 nongenic,nongenic -109 upstream,-615 upstream {Y39G10AR.16},{Y39G10AR.6} 203 CB6890_redo I 2334452 1 T G 255 1.00 63 62 1 18 19 @,gGGGGGGGgGggGGggGg point 0 nongenic,nongenic,nongenic -1850 upstream,-7931 upstream,1126 into {Y39G10AR.16},{Y39G10AR.5},{Y39G10AR.6} 204 CB6890_redo I 2379643 1 C T 255 1.00 63 62 0 32 32 @TTTttttttTttTtTTTTtTTTtTtTTttTTT point 0 missense,SNP ATG->ATA[Met->Ile],none {Y39G10AR.17},{snp_Y39G10AR[4]} 209 CB6890_redo I 2382607 1 A G 139 1.00 63 62 0 4 4 @GGGg point 0 nongenic,nongenic -754 upstream,358 downstream {Y39G10AR.17},{Y39G10AR.18a} 213 CB6890_redo I 2396167 1 T A 255 1.00 63 62 0 30 30 @AAAaaAaaaAAAAAAaaAAAaAAaaAaAaA point 0 missense ATG->TTG[Met->Leu] {Y39G10AR.18a} 222 CB6890_redo I 2538652 1 A C 14 1.00 63 0 0 4 4 @CCcc point 0 nongenic,nongenic,nongenic -24867 upstream,-6121 upstream,3442 into {Y23H5B.7c},{Y23H5B.3},{Y23H5B.4} 226 CB6890_redo I 2560576 1 G T 255 1.00 63 62 0 25 25 @TTTTtTtTTTtTTTttTTTtTTTTT point 0 nongenic,nongenic -346 upstream,464 downstream {C55C2.3},{C55C2.4} 227 CB6890_redo I 2568367 1 C T 255 1.00 63 62 0 18 18 @ttttTtTttTtTtttttt point 0 nongenic -393 upstream {C55C2.1} 228 CB6890_redo I 2568368 1 G A 255 1.00 63 62 0 21 21 @aaaaAaAaaAaAaaaaaaaaa point 0 nongenic -392 upstream {C55C2.1} 229 CB6890_redo I 2579329 1 A T 255 1.00 63 62 0 28 28 @TTTTtTtTttTtTTtTTTtttTttttTt point 0 nongenic -3307 upstream {C55C2.5a,C55C2.5b,C55C2.5c} 230 CB6890_redo I 2628059 1 G A 255 1.00 63 62 0 35 35 @AaaAaaAAaAAAaaAAAaaaAaaaAAaAAaAAaAa point 0 nongenic,nongenic -4948 upstream,520 into {Y23H5A.8},{Y23H5A.7a,Y23H5A.7b} 232 CB6890_redo I 2652609 1 G C 3 1.00 63 2 1 5 6 @,CCTCC point 0 nongenic,nongenic,nongenic,nongenic -15551 upstream,-896 upstream,4626 into,4634 into {F32B5.6d.1},{F40E3.6},{F40E3.5.1},{F40E3.5.2} 233 CB6890_redo I 2652611 1 T C 3 1.00 63 2 0 6 6 @GCCACC point 0 nongenic,nongenic,nongenic,nongenic -15549 upstream,-898 upstream,4624 into,4632 into {F32B5.6d.1},{F40E3.6},{F40E3.5.1},{F40E3.5.2} 234 CB6890_redo I 2710697 1 T C 255 1.00 63 62 0 31 31 @CCcCCCCcCCCcccCCcCcCcCCCccCCccc point 0 SNP none {haw4255} 235 CB6890_redo I 2764493 1 C A 255 1.00 63 62 0 17 17 @AAAAaaAaaaaaaaaaa point 0 nongenic,nongenic,nongenic,nongenic,nongenic -10420 upstream,-3451 upstream,3175 into,3307 into,3321 into {Y71F9B.1},{Y71F9B.9b.1},{Y71F9B.10a.2},{Y71F9B.10b},{Y71F9B.10a.1} 242 CB6890_redo I 2777373 1 C G 208 1.00 63 62 0 9 9 @ggGGGGggg point 0 five_prime_UTR,silent none,GCG->GCC[Ala->Ala] {Y71F9B.13c},{Y71F9B.13a,Y71F9B.13b} 259 CB6890_redo I 2980360 1 C G 7 1.00 63 20 2 3 5 @T,.gg point 0 nongenic -22482 upstream {Y71F9AR.1} 263 CB6890_redo I 3146645 1 C T 255 5.62 63 62 0 22 22 @TtTTTTTTTTTTtTtttttttt point 0 nongenic,nongenic,nongenic -1351 upstream,-3468 upstream,1150 into {K09H9.2.1},{K09H9.5},{K09H9.6} 271 CB6890_redo I 3258994 1 G A 3 7.75 0 2 5 7 12 @.,AA,AAAAA,, point 0 nongenic -877 upstream {Y44E3B.2} 272 CB6890_redo I 3258997 1 T G 3 7.75 0 2 5 7 12 @.,GG,GGGGG,, point 0 nongenic -874 upstream {Y44E3B.2} 276 CB6890_redo I 3305561 1 G A 175 1.00 63 62 0 8 8 @aaaaaaAA point 0 missense TCA->TTA[Ser->Leu] {Y44E3A.2} 291 CB6890_redo I 3485158 1 C A 177 1.12 63 62 1 7 8 @AaaAAAa, point 0 nongenic 657 downstream {Y47G6A.8} 292 CB6890_redo I 3492022 1 C G 247 5.56 63 62 3 20 23 @GGgGg...GGGGgGgGGGGgGgg point 0 nongenic,nongenic -10717 upstream,4160 into {Y47G6A.7a.1,Y47G6A.7a.2,Y47G6A.7b.1,Y47G6A.7b.2},{Y47G6A.17} 295 CB6890_redo I 3533408 1 C A 255 1.00 63 62 0 41 41 @AAAaaAaAaaAAAAAAAAaaAaaaaAaaaAAAAaaaaaAAa point 0 nongenic,nongenic -3449 upstream,-587 upstream {Y47G6A.19a,Y47G6A.19b,Y47G6A.19c},{Y47G6A.5a} 296 CB6890_redo I 3533419 1 G T 255 1.00 63 62 0 49 49 @TtTttTTTTTTTTttTttttTtttTTTTtttttTTtTtTTTTTTtTTtt point 0 nongenic,nongenic -3460 upstream,-576 upstream {Y47G6A.19a,Y47G6A.19b,Y47G6A.19c},{Y47G6A.5a} 297 CB6890_redo I 3656842 1 C G 12 1.00 63 0 0 4 4 @gggg point 0 nongenic 1209 into {T28F2.7} 305 CB6890_redo I 3885008 1 A G 255 1.00 63 62 0 13 13 @gGggggggGGGGG point 0 SNP none {haw5911} 306 CB6890_redo I 3885020 1 A G 255 1.00 63 62 0 21 21 @GggggggGGGGGGGGGggGGg point 0 SNP none {haw5912} 6274 CB6890_redo I 3929760 0 X X -1000 -999.99 -1000 -1000 4 -3 1 @,,.,ttttt indel 0 nongenic,nongenic -1072 upstream,-1870 upstream {T21E3.2},{T20F5.7} 308 CB6890_redo I 3935098 1 T C 255 1.06 63 62 0 23 23 @cCCccCCCCcCCCCCcCCCCccc point 0 nongenic,nongenic 184 downstream,305 downstream {T21E3.3},{T21E3.1} 309 CB6890_redo I 3935121 1 A C 255 1.38 63 62 0 17 17 @cCCCCcccCcCCCCCCC point 0 nongenic,nongenic 161 downstream,328 downstream {T21E3.3},{T21E3.1} 310 CB6890_redo I 3935148 1 G C 250 1.56 63 62 0 16 16 @CcCCCCCCCCCCCCCC point 0 nongenic,nongenic 134 downstream,355 downstream {T21E3.3},{T21E3.1} 311 CB6890_redo I 3990146 1 T C 9 3.25 63 62 191 64 255 @C,,,,,c,Cc,c,c,,cC,,CC,C,C,ccC,,,C,CCC,CCC,C,CcCC,,,cCCC,C,C,CC,,,,cCCC,,CC,C,cccCC,,C,,ccc,,,C,,,, point 0 nongenic -5564 upstream {F28H1.1} 312 CB6890_redo I 3990323 1 T C 255 2.62 63 62 133 122 255 @,,CccCc.,CC,.C,,cCccC,cCC,..cCccCC,CCCC,CCCccCCCCccCCC,,CC,CC,ccccc.cc,CCCC,c.cCCCCCCCCccccCCCCC,CC point 0 nongenic -5387 upstream {F28H1.1} 313 CB6890_redo I 3990559 1 T C 104 2.56 63 62 121 134 255 @.c.Cc...ccccc.cc..ccc,.cc.ccc..,cccccccCCcc.c...c.c..cCCc.c.cc..cc.cc.,Cccccccc..c.ccccc.CCccccccc. point 0 nongenic -5151 upstream {F28H1.1} 315 CB6890_redo I 4127917 1 G A 255 1.00 63 62 0 47 47 @AaaAAaaAaaAAaAAaAaaAaAAaAAAaAAAAAaAaAAaAAAAAAaa point 0 SNP none {haw6028} 316 CB6890_redo I 4185827 1 G C 13 5.50 63 0 1 3 4 @ccC, point 0 nongenic,nongenic,nongenic,nongenic -721 upstream,-723 upstream,766 into,832 downstream {C18E3.7c.1},{C18E3.7b,C18E3.7c.2,C18E3.7d.2,C18E3.7d.3},{C18E3.7a},{R12E2.1} 162979 CB6890_redo I 4466750 76 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2895 to 2971 bp into {T01A4.3} 320 CB6890_redo I 4466829 1 A T 196 1.00 63 38 0 7 7 @tTTTTtt point 0 three_prime_UTR none {T01A4.3} 324 CB6890_redo I 4503135 1 G A 255 1.00 63 62 0 33 33 @aaAAAAaAAaAAaAAaaaaAAAaAAaAaAAaAa point 0 nongenic,nongenic,nongenic,nongenic 5074 into,5123 into,5228 into,526 into {T01A4.1a},{T01A4.1d},{T01A4.1c},{T01A4.1b} 325 CB6890_redo I 4503136 1 G A 255 1.00 63 62 0 34 34 @aaAAAAaAAaAAaAAaaaaAAAaAAaAaAAaAaA point 0 nongenic,nongenic,nongenic,nongenic 5073 into,5122 into,5227 into,527 into {T01A4.1a},{T01A4.1d},{T01A4.1c},{T01A4.1b} 341 CB6890_redo I 4543834 1 A G 54 4.06 48 62 8 8 16 @.GG..GGg.,,,,ggG point 0 nongenic,nongenic -4125 upstream,-6644 upstream {Y119C1B.9},{Y119C1B.3} 342 CB6890_redo I 4543841 1 A G 191 2.19 50 62 5 8 13 @.,,,,ggGGGGGG point 0 nongenic,nongenic -4132 upstream,-6637 upstream {Y119C1B.9},{Y119C1B.3} 6278 CB6890_redo I 4545401 0 X X -1000 -999.99 -1000 -1000 11 5 16 @,,.,,,AAA.,,,. indel 1 nongenic,nongenic -5078 upstream,-5692 upstream {Y119C1B.3},{Y119C1B.9} 359 CB6890_redo I 4740818 1 C G 255 1.00 63 62 0 33 33 @GGGGGGGGGGGGgGgGggggGggggGgggggGG point 0 missense AGG->ACG[Arg->Thr] {C10H11.9} 363 CB6890_redo I 4919582 1 T G 7 1.00 63 52 4 7 11 @GA,,GGGGG.. point 0 nongenic,nongenic -5531 upstream,785 into {F21F3.6.1},{F21F3.7} 379 CB6890_redo I 5087508 1 T A 255 1.00 63 62 0 44 44 @AAAaaaaaaaAAAAAaaaaAAAAAAAAAAaAaAAaAAAaAaAaa point 0 nongenic,nongenic,nongenic,nongenic,nongenic -5223 upstream,-9095 upstream,1189 into,1196 into,992 into {C30F8.2.1},{C30F8.3},{C30F8.4a.2,C30F8.4b.2},{C30F8.4a.1},{C30F8.4b.1} 380 CB6890_redo I 5143449 1 T C 45 8.62 63 0 4 4 8 @CCCC.... point 0 nongenic,nongenic -11082 upstream,1772 into {Y110A7A.2},{Y110A7A.3} 385 CB6890_redo I 5189090 1 A C 12 1.00 63 54 2 8 10 @,GcC,ccccc point 0 nongenic,nongenic -1060 upstream,470 downstream {F56A3.1},{F56A3.5} 386 CB6890_redo I 5221052 1 C A 255 1.00 63 62 0 31 31 @aAAAaAaAAAaaaAaAAAAAaaAAAaaaAaA point 0 nongenic -5830 upstream {C32E12.5.1} 387 CB6890_redo I 5301101 1 C A 255 1.00 63 62 0 21 21 @aAaaAAAAaAAaaaAaaaAaA point 0 SNP,three_prime_UTR none,none {haw6781,uCE1-872},{C01G8.9a} 388 CB6890_redo I 5448372 1 A T 255 1.00 63 62 0 22 22 @TtTTTTTtttTTttTTTTTTtt point 0 SNP none {haw6835} 389 CB6890_redo I 5451259 1 G A 194 2.25 40 62 0 13 13 @AAAAAAAaAAAAA point 0 nongenic -4400 upstream {F27C1.13} 390 CB6890_redo I 5530574 1 G C 255 1.00 63 62 0 36 36 @CCCccCccCCccCCcCCcCcCcCcccCccccccccc point 0 nongenic,nongenic 111 downstream,812 downstream {F59A3.9},{F59A3.1} 391 CB6890_redo I 5590737 1 A C 126 1.00 63 62 3 7 10 @,,,CccCcCc point 0 nongenic,nongenic,nongenic -1153 upstream,126 into,6517 into {M01E11.7b.1},{M01E11.7d},{M01E11.7a,M01E11.7c} 393 CB6890_redo I 5810749 1 A T 255 1.00 63 62 0 35 35 @TttTtTTttTtTtTTTTtttTtttttTTtTtTTTt point 0 nongenic,nongenic,nongenic -741 upstream,-743 upstream,3038 into {C32F10.4.1},{C32F10.4.2},{C32F10.2} 394 CB6890_redo I 6063172 1 C T 255 1.00 63 62 1 23 24 @tTtttTTTtttttttTTttTT,Tt point 0 nongenic,nongenic,nongenic -2136 upstream,-917 upstream,1391 into {C27A12.8.1},{C27A12.10},{C27A12.9} 395 CB6890_redo I 6139031 1 A T 255 5.12 63 62 0 16 16 @ttttttttTtttTTtt point 0 nongenic,nongenic 186 downstream,73 downstream {F56F4.6},{F56F4.4} 396 CB6890_redo I 6163210 1 T A 255 1.00 63 62 0 27 27 @AAaaaaAAaaAaaaaAaaAAaAaAaAa point 0 SNP none {haw7231} 401 CB6890_redo I 6163292 1 G C 113 1.00 63 4 0 4 4 @ccCc point 0 nongenic -1624 upstream {T09B4.7} 402 CB6890_redo I 6263282 1 G C 87 1.00 63 62 1 5 6 @ccc,CC point 0 SNP none {snp_C48E7[3]} 404 CB6890_redo I 6424917 1 G A 255 1.00 63 62 0 24 24 @aaaaAAAAAaaaaaaAaaAAAaAa point 0 missense GAC->AAC[Asp->Asn] {F37E3.1} 405 CB6890_redo I 6801831 1 T C 16 1.00 63 62 4 5 9 @CCcCC,.,. point 0 three_prime_UTR none {E02D9.1b.1,E02D9.1b.2} 406 CB6890_redo I 6820252 1 T C 255 1.00 63 62 0 34 34 @cccCcCCCcCCCccccCcCCcCCcCccccccCcc point 0 SNP none {haw7362} 409 CB6890_redo I 6949307 1 A G 186 1.44 63 62 0 11 11 @Ggggggggggg point 0 nongenic,nongenic,nongenic,nongenic -1826 upstream,-3949 upstream,1151 into,814 into {T10B11.1},{T10B11.6},{T10B11.7a},{T10B11.7b} 410 CB6890_redo I 6949331 1 T A 202 2.94 63 62 0 14 14 @aaaaaaaaaaaaaa point 0 nongenic,nongenic,nongenic,nongenic -1802 upstream,-3973 upstream,1127 into,790 into {T10B11.1},{T10B11.6},{T10B11.7a},{T10B11.7b} 414 CB6890_redo I 7127466 1 T C 255 1.00 63 62 0 22 22 @CCCCcCCCCCccCCccCcCCCC point 0 nongenic,nongenic -5030 upstream,957 into {K10D3.3},{K10D3.2} 415 CB6890_redo I 7140681 1 G T 255 1.00 63 62 0 22 22 @tttTttTtttttTttTtTTttT point 0 nongenic,nongenic -708 upstream,405 into {K10D3.4},{H37N21.1} 416 CB6890_redo I 7140819 1 T C 255 1.00 63 62 0 20 20 @cccCcCcCCCCcccCcCCcC point 0 SNP none {haw7427} 417 CB6890_redo I 7140831 1 A T 255 1.00 63 62 0 17 17 @TTtttTtTTtTTTTTTT point 0 SNP none {haw7428} 418 CB6890_redo I 7251393 1 A T 21 1.00 63 62 3 8 11 @.,.ttttTTtt point 0 nongenic,nongenic,nongenic -112 upstream,-139 upstream,-545 upstream {R06C7.7b},{R06C7.7a.1},{R06C7.8} 419 CB6890_redo I 7301404 1 C G 255 1.00 63 62 0 29 29 @GGggGGgGggGggGGGgGggggggGggGg point 0 missense GGC->GCC[Gly->Ala] {F13G3.5a,F13G3.5b.1,F13G3.5b.2} 420 CB6890_redo I 7374552 1 T G 172 1.00 63 62 3 11 14 @GggggGgGggG... point 0 nongenic -3020 upstream {F07A5.5} 421 CB6890_redo I 7374554 1 C A 112 1.00 63 62 4 9 13 @aaaAaAaaA.... point 0 nongenic -3022 upstream {F07A5.5} 424 CB6890_redo I 7428554 1 T C 255 1.00 63 62 0 32 32 @CCcCCccCCccCccccccCcCCCcCCCccccC point 0 SNP none {haw7535} 425 CB6890_redo I 7530504 1 T A 255 1.00 63 62 0 45 45 @AAaAaAAaaaAaaaAaAAAAaaAAaaAAAaAaAaAAaaAAAaAAA point 0 nongenic,nongenic -1806 upstream,1192 into {C26C6.4a},{C26C6.3} 426 CB6890_redo I 7542899 1 T G 16 1.00 63 36 2 7 9 @GG.ggg.gg point 0 nongenic,nongenic -10070 upstream,-746 upstream {T25G3.1},{C26C6.5a,C26C6.5b} 427 CB6890_redo I 7547117 1 A T 255 1.00 63 62 0 28 28 @TTTTTtTttttTttttTTtTTtTtTttt point 0 SNP none {haw7629} 428 CB6890_redo I 7547127 1 A T 255 1.00 63 62 0 32 32 @TTtTttttTttttTTtTTtTtTttttTtTttt point 0 SNP none {haw7630} 429 CB6890_redo I 7547365 1 C A 255 1.00 63 62 0 23 23 @aAAAaaAAaAaAaaaAAaaAaaA point 0 SNP none {haw7631} 430 CB6890_redo I 7588394 1 A G 255 1.00 63 62 0 32 32 @GGGggGGGGGgGGggGGgGgGGGgGgGGGGGG point 0 nongenic,nongenic,nongenic -253 upstream,-31 upstream,-37 upstream {D2030.7},{D2030.6.2},{D2030.6.1} 432 CB6890_redo I 7666811 1 A T 86 1.00 63 0 0 5 5 @ttTtt point 0 nongenic,nongenic -1730 upstream,-8522 upstream {F26A3.5},{F26A3.4.1} 433 CB6890_redo I 7666813 1 T G 130 1.00 63 40 0 5 5 @ggGgg point 0 nongenic,nongenic -1728 upstream,-8524 upstream {F26A3.5},{F26A3.4.1} 435 CB6890_redo I 7741844 1 C A 22 9.25 0 22 0 8 8 @AaaaaAAA point 0 nongenic -13932 upstream {F58H10.1} 437 CB6890_redo I 7751726 1 C A 255 1.00 63 62 0 26 26 @aaaAaaAaAaAAAaaAAAAAaaAAaA point 0 nongenic -4050 upstream {F58H10.1} 438 CB6890_redo I 7753377 1 T C 59 1.00 63 4 0 4 4 @CccC point 0 nongenic -2399 upstream {F58H10.1} 448 CB6890_redo I 7869009 1 C T 68 1.00 63 38 0 5 5 @TttTT point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -1096 upstream,-748 upstream,2534 into,2615 into,2658 into,2660 into,2669 into,2833 into,2884 into {R11A5.6},{R11A5.4c.1},{R11A5.4d.5},{R11A5.4a.1,R11A5.4a.2,R11A5.4b.2},{R11A5.4c.2},{R11A5.4c.3,R11A5.4d.1,R11A5.4d.3,R11A5.4d.4,R11A5.4d.6},{R11A5.4d.2},{R11A5.4c.4},{R11A5.4b.1} 449 CB6890_redo I 7879122 1 A T 66 1.00 63 62 2 4 6 @TtTT,, point 0 nongenic,nongenic -3567 upstream,-5223 upstream {R11A5.7.1},{F55D12.1} 450 CB6890_redo I 7879475 1 C T 176 1.00 63 62 0 7 7 @tttTtTT point 0 SNP none {haw7930} 451 CB6890_redo I 7879517 1 G A 230 1.00 63 62 0 8 8 @aAaAAaaa point 0 nongenic,nongenic -3962 upstream,-4828 upstream {R11A5.7.1},{F55D12.1} 452 CB6890_redo I 7879522 1 A T 255 1.25 63 62 0 11 11 @tTtTTtttTTt point 0 nongenic,nongenic -3967 upstream,-4823 upstream {R11A5.7.1},{F55D12.1} 454 CB6890_redo I 7962272 1 A G 255 1.00 63 62 0 37 37 @GGGgggggGgGGGGgGGgggGgGGggGGGgGgGGggG point 0 missense ACA->GCA[Thr->Ala] {T22C1.10a,T22C1.10b} 459 CB6890_redo I 8273535 1 T G 255 1.00 63 62 0 46 46 @gGGgGGGgGgggGgGggGgggGgggggggGggGgggGgggGggggg point 0 nongenic,nongenic -469 upstream,59 downstream {T01G9.1},{ZK265.8} 460 CB6890_redo I 8273546 1 C A 255 1.00 63 62 0 40 40 @AaAaaAaaaAaaaaaaaAaaAaaaAaaaAaaaaaaAAaaa point 0 nongenic,nongenic -458 upstream,70 downstream {T01G9.1},{ZK265.8} 466 CB6890_redo I 8473646 1 C T 255 1.00 63 62 0 34 34 @TTTtttTttTttTtTttttTtTtTtTttTtTttt point 0 nongenic,nongenic -171 upstream,454 downstream {D1081.11},{D1081.12} 472 CB6890_redo I 8749238 1 C G 3 1.00 63 0 1 4 5 @G,GGG point 0 nongenic,nongenic -2319 upstream,420 downstream {C36B1.9},{C36B1.10} 482 CB6890_redo I 9039720 1 A G 255 1.00 63 62 0 34 34 @ggggGGGGGgGgGgggGGgggGgGggGgGGggGG point 0 SNP none {haw8746} 483 CB6890_redo I 9109190 1 C G 255 1.00 63 62 0 29 29 @GGGgggGGGgGgGGGGgGgGGgGGgGGGG point 0 nongenic,nongenic,nongenic,nongenic -1258 upstream,-8916 upstream,1026 into,768 into {W10D5.3f},{ZK858.1},{W10D5.2.1},{W10D5.2.2} 489 CB6890_redo I 9235193 1 C T 255 1.00 63 62 0 41 41 @TTtttttttTTtttTTTTTTTTTtTttTtTTTtTTtTTTTt point 0 SNP none {haw8914} 490 CB6890_redo I 9235318 1 G A 255 1.00 63 62 0 31 31 @AAAaaAaaAAaaAaAaaAaaaAAaAaaaAaa point 0 SNP none {haw8915} 491 CB6890_redo I 9235427 1 G A 255 1.00 63 62 1 18 19 @aaaAaAaAAA,aaAaAaAa point 0 nongenic,nongenic,nongenic -1877 upstream,1258 into,758 into {VF36H2L.1},{F36H2.1b},{F36H2.1a,F36H2.1c} 492 CB6890_redo I 9246865 1 C G 255 1.00 63 62 0 14 14 @GgGGGGGggGGGGG point 0 missense,SNP CGT->CCT[Arg->Pro],none {F36H2.2},{haw8926} 493 CB6890_redo I 9246866 1 G C 255 1.00 63 62 0 14 14 @CcCCCCCccCCCCC point 0 missense,SNP CGT->GGT[Arg->Gly],none {F36H2.2},{haw8927} 494 CB6890_redo I 9276894 1 G A 255 1.00 63 62 0 35 35 @AaAAAaAAaAaAAAaaAAAAAAAaAaaAaaAaAAa point 0 nongenic,nongenic -3105 upstream,1787 into {F14B4.2a.1},{F14B4.2b} 496 CB6890_redo I 9346153 1 A C 238 1.00 63 62 0 10 10 @cccCcCcCCC point 0 nongenic,nongenic -3665 upstream,1439 into {C12C8.3a,C12C8.3b},{M04C9.2} 497 CB6890_redo I 9346156 1 T C 214 1.00 63 62 1 10 11 @ccCcCcCCC.c point 0 nongenic,nongenic -3668 upstream,1442 into {C12C8.3a,C12C8.3b},{M04C9.2} 498 CB6890_redo I 9356742 1 G T 255 1.00 63 62 0 27 27 @TtTtTTTTTttTTtTtTttTtTTttTt point 0 missense GAC->GAA[Asp->Glu] {M04C9.4} 499 CB6890_redo I 9357394 1 A G 242 1.00 63 62 0 9 9 @ggGgGggGg point 0 nongenic,nongenic -1671 upstream,-323 upstream {M04C9.5a},{M04C9.4} 504 CB6890_redo I 9453150 1 A T 34 4.06 63 58 6 30 36 @tTT,ttt,Ttt,tttt,TT,TTTt,tttttTtttTt point 0 nongenic,nongenic -2426 upstream,-4657 upstream {F46A9.6.1},{F46A9.1} 505 CB6890_redo I 9457731 1 G A 255 1.00 63 62 0 46 46 @aAAAaAaaaAAAaAaAAaAaAAAAAAAaaaaaAaaaAaAaAaaAaA point 0 SNP none {haw9060} 506 CB6890_redo I 9573999 1 T C 255 1.00 63 62 0 29 29 @cCCccCcccCcCCcCcCccccccccCcCC point 0 nongenic,nongenic,nongenic,nongenic,nongenic -5777 upstream,162 into,180 into,370 into,794 downstream {C36F7.4d},{C36F7.4a.1},{C36F7.4a.2},{C36F7.4b,C36F7.4c},{C36F7.5} 507 CB6890_redo I 9699160 1 T C 255 1.00 63 62 0 17 17 @cCcCCCCCCCCccCccc point 0 missense,SNP AAT->AGT[Asn->Ser],none {C04F12.8},{haw9282} 508 CB6890_redo I 9737906 1 C A 255 1.00 63 62 0 46 46 @aaaAaaAaAAAaaAAaaaaAaAaAAAAAaAaAAAaAAaaaAaaaAA point 0 SNP none {haw9323} 518 CB6890_redo I 9940106 1 G T 197 1.00 63 62 0 7 7 @TTtTtTt point 0 nongenic,nongenic -1815 upstream,-7722 upstream {Y106G6A.1},{T24D1.1a,T24D1.1b} 519 CB6890_redo I 9940111 1 G T 167 1.00 63 62 0 6 6 @TtTtTt point 0 nongenic,nongenic -1820 upstream,-7717 upstream {Y106G6A.1},{T24D1.1a,T24D1.1b} 520 CB6890_redo I 9940580 1 A T 255 1.00 63 62 0 15 15 @tTTTTtTTTttTTTt point 0 SNP none {haw9585} 521 CB6890_redo I 9949834 1 T A 59 1.00 63 14 2 6 8 @.A,AAaaa point 0 nongenic,nongenic -11543 upstream,2006 into {Y106G6A.1},{T24D1.1a,T24D1.1b} 523 CB6890_redo I 10109254 1 T A 255 1.00 63 62 0 36 36 @AAaaAAAAAAAAaaaAaAAAAAAAAaAaAAAaAAAa point 0 SNP none {haw9645} 524 CB6890_redo I 10113279 1 G T 125 1.00 63 30 0 5 5 @TTtTt point 0 silent,SNP ACC->ACA[Thr->Thr],none {Y106G6D.3},{haw9650} 534 CB6890_redo I 10137806 1 G C 3 2.69 63 0 1 5 6 @CAC,CC point 0 nongenic -9559 upstream {F16C3.1} 535 CB6890_redo I 10137808 1 G C 3 2.69 63 0 1 5 6 @CT,CCC point 0 nongenic -9557 upstream {F16C3.1} 537 CB6890_redo I 10188886 1 T C 255 1.44 63 62 0 22 22 @ccCcCcCcccccccccccCccc point 0 silent AAA->AAG[Lys->Lys] {C25A1.10a,C25A1.10b} 539 CB6890_redo I 10205458 1 A C 54 1.00 40 6 0 5 5 @CCCCC point 0 nongenic -5028 upstream {Y106G6E.1} 6294 CB6890_redo I 10243053 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @.,,,..AAAaa indel 0 nongenic,nongenic -11847 upstream,-5225 upstream {Y106G6E.6.1},{ZC247.3} 549 CB6890_redo I 10243054 1 G A 5 1.00 63 52 6 6 12 @aAAAaa,,,... point 0 nongenic,nongenic -11848 upstream,-5223 upstream {Y106G6E.6.1},{ZC247.3} 577 CB6890_redo I 10427807 1 G A 255 1.00 63 62 0 41 41 @AAAAAAaaAAAAaaAAAAAaAAAaaaAAAAAAaaAAAaAaa point 0 silent ACC->ACT[Thr->Thr] {F25D7.5} 578 CB6890_redo I 10436459 1 T G 3 1.00 63 32 3 4 7 @.,.gGGG point 0 nongenic,nongenic,nongenic,nongenic -592 upstream,-646 upstream,206 into,443 downstream {Y106G6H.2a.1},{Y106G6H.2a.2},{Y106G6H.3},{Y106G6H.4} 6296 CB6890_redo I 10453326 0 X X -1000 -999.99 -1000 -1000 7 -6 1 @,,.,,,,ggg indel 0 nongenic 467 downstream {Y106G6H.8} 580 CB6890_redo I 10462798 1 G A 69 1.00 63 2 2 5 7 @aAA.A.a point 0 nongenic -7174 upstream {Y106G6H.9} 581 CB6890_redo I 10462800 1 A G 92 1.00 63 62 1 6 7 @tGGgGg. point 0 nongenic -7176 upstream {Y106G6H.9} 582 CB6890_redo I 10489711 1 G C 43 1.00 63 40 1 3 4 @,ccc point 0 nongenic,nongenic -11877 upstream,730 downstream {F37D6.6},{F37D6.4} 583 CB6890_redo I 10520777 1 T G 255 1.00 63 62 0 36 36 @gGGGggGGGGGgGGGggggGGgggGgggGGggGggg point 0 nongenic,nongenic,nongenic -82 upstream,27 downstream,28 downstream {F59C6.12},{F59C6.5.1},{F59C6.5.2} 584 CB6890_redo I 10520789 1 G A 255 1.00 63 62 0 41 41 @aaAAAAAaAAAaaaaAAaaaAaaaAAaaAaaaaaaaAAaaa point 0 nongenic,nongenic,nongenic -70 upstream,39 downstream,40 downstream {F59C6.12},{F59C6.5.1},{F59C6.5.2} 591 CB6890_redo I 10595968 1 T C 255 1.00 63 62 0 28 28 @CccCCcccCCCCcCCCCcCCCcCCcccc point 0 nongenic,nongenic -2730 upstream,1506 into {T22A3.5},{T22A3.6} 592 CB6890_redo I 10775229 1 A C 255 1.00 63 62 0 35 35 @CCccCCccCcccCcccCCccCccccCCccCCCCCc point 0 nongenic,nongenic,nongenic,nongenic,nongenic 1223 into,1437 into,1453 into,1461 into,189 downstream {R13H8.1a},{R13H8.1f},{R13H8.1b},{R13H8.1c},{R13H8.1d,R13H8.1e.1,R13H8.1e.2} 594 CB6890_redo I 10870917 1 A G 255 1.00 63 62 0 26 26 @ggggGGgGggGGGgGgGGGGGGgggG point 0 nongenic,nongenic,nongenic -2393 upstream,-5284 upstream,891 into {Y37F4.8},{T27C10.4},{Y37F4.6} 621 CB6890_redo I 10978887 1 A G 255 1.00 63 62 0 32 32 @GGGGGGgGggGGgGGgGGGGGGGGGGgGggGG point 0 silent,SNP TCA->TCG[Ser->Ser],none {Y52B11A.3a,Y52B11A.3b},{haw9930} 622 CB6890_redo I 11001775 1 C A 255 1.00 63 62 0 43 43 @aAAaAaAaAaaAaAAAAAAaAAAaaaaaaaaaAaaaaaaaaaa point 0 nongenic,nongenic -13703 upstream,2502 into {Y52B11A.5},{Y52B11A.4} 624 CB6890_redo I 11047723 1 T G 16 1.00 63 62 1 3 4 @ggG. point 0 nongenic,nongenic -8902 upstream,4743 into {Y52B11A.9},{Y52B11A.10} 629 CB6890_redo I 11120911 1 T C 137 1.00 63 62 0 4 4 @Cccc point 0 nongenic,nongenic,nongenic -26393 upstream,-2842 upstream,13750 into {W02B9.1a},{Y52B11B.1},{W02B9.1b} 631 CB6890_redo I 11220200 1 C A 255 1.00 63 62 0 28 28 @AAAAAaAaaAaaaAaaaaAaAaaaaaaA point 0 SNP none {haw10216} 635 CB6890_redo I 11305399 1 C G 3 3.75 3 0 3 5 8 @.,.ggggg point 0 nongenic,nongenic 188 downstream,412 downstream {Y53H1B.6},{H25P06.4} 636 CB6890_redo I 11305401 1 A T 3 3.62 3 2 4 7 11 @.,tttgtt,t, point 0 nongenic,nongenic 190 downstream,410 downstream {Y53H1B.6},{H25P06.4} 637 CB6890_redo I 11305402 1 T C 3 3.62 3 2 4 7 11 @.G.ccgcc,c, point 0 nongenic,nongenic 191 downstream,409 downstream {Y53H1B.6},{H25P06.4} 647 CB6890_redo I 11325350 1 A C 9 4.31 35 18 2 2 4 @..cc point 0 nongenic,nongenic -2241 upstream,1832 into {H25P06.1.1},{H25P06.2a,H25P06.2b} 660 CB6890_redo I 11505539 1 T A 15 3.81 63 8 2 5 7 @.,aAAaa point 0 nongenic,nongenic,nongenic -4517 upstream,-5893 upstream,1582 into {F32B4.1},{K08C9.6},{F32B4.8} 663 CB6890_redo I 11516472 1 G A 227 1.00 63 62 0 10 10 @aaaAaAaAAa point 0 nongenic,nongenic,nongenic -1190 upstream,-2656 upstream,628 into {F32B4.4b.1},{F32B4.2},{F32B4.6} 665 CB6890_redo I 11603465 1 A G 255 1.06 63 62 0 18 18 @GgggGggggGgGGggGgG point 0 SNP none {haw10691} 666 CB6890_redo I 11606261 1 A T 255 1.06 63 62 0 36 36 @ttttttTtTtTttttttTTttTTTTtttTTTTTTtt point 0 SNP none {haw10701} 667 CB6890_redo I 11628456 1 A G 255 1.00 63 62 0 20 20 @GGgGgGgggGGGGggGgGgg point 0 nongenic -1174 upstream {W04G5.3} 681 CB6890_redo I 11764538 1 T C 34 1.00 63 62 3 6 9 @.,.ccccCC point 0 three_prime_UTR none {ZK1151.1a,ZK1151.1e} 683 CB6890_redo I 11800314 1 A T 255 1.00 63 62 0 36 36 @ttTTtttTtttTTtTTTTTTtTttTTttTTTTTTTT point 0 nongenic,nongenic -2391 upstream,1484 into {T02G6.1},{T02G6.2} 685 CB6890_redo I 11883806 1 G C 255 4.31 63 62 0 28 28 @cCcccCcCCcCcccccCccCCcccCCcC point 0 nongenic,nongenic,nongenic -1215 upstream,-15710 upstream,3453 into {Y47H9C.5b},{Y47H9C.4a,Y47H9C.4b,Y47H9C.4c},{Y47H9C.5a} 686 CB6890_redo I 11905377 1 T C 255 1.00 63 62 0 35 35 @CCcCcccCCCCCCcCcccccCcCcCCCCccccccc point 0 SNP none {haw11247} 687 CB6890_redo I 11975955 1 A T 169 4.00 63 62 0 13 13 @ttttttttttttt point 0 nongenic,nongenic -3474 upstream,-4167 upstream {Y53C10A.4},{Y53C10A.15} 688 CB6890_redo I 11975961 1 C A 223 3.88 63 62 0 14 14 @aaaaaaaaaaaAaa point 0 nongenic,nongenic -3468 upstream,-4173 upstream {Y53C10A.4},{Y53C10A.15} 689 CB6890_redo I 11988102 1 C T 255 1.00 63 62 0 30 30 @TTttttTtTtttttTTtTTTtTTtTTtttt point 0 SNP none {haw11443} 692 CB6890_redo I 12093640 1 T A 198 1.62 59 62 5 29 34 @,..AaAaAAAAAAAAAAAAAAAAA,AAA.AaAAA point 0 nongenic,nongenic -3680 upstream,831 into {Y47H10A.3},{Y47H10A.4} 693 CB6890_redo I 12093649 1 A C 18 1.38 63 62 32 42 74 @CcCcCC,,,,,,,,,,,,CC,CCCCc,.,,,,C,,CCCCC,C,CCCCCC,CCC,,CcCC,CCCC,,,cc.,CCC point 0 nongenic,nongenic -3689 upstream,822 into {Y47H10A.3},{Y47H10A.4} 695 CB6890_redo I 12120175 1 A G 255 1.00 63 62 0 24 24 @GGgGGGGGgggGgGgGgGgGgGgg point 0 nongenic,nongenic,nongenic -2625 upstream,2098 into,598 downstream {M01G12.4},{M01G12.6},{M01G12.10} 696 CB6890_redo I 12479521 1 G T 85 1.75 37 62 1 3 4 @T.TT point 0 nongenic,nongenic -4648 upstream,-943 upstream {T27F6.4},{T27F6.2} 697 CB6890_redo I 12479794 1 G T 79 5.38 63 62 0 6 6 @TTTTtT point 0 nongenic,nongenic -1216 upstream,-4375 upstream {T27F6.2},{T27F6.4} 698 CB6890_redo I 12479795 1 G T 84 4.69 63 62 0 7 7 @TTTTtTT point 0 nongenic,nongenic -1217 upstream,-4374 upstream {T27F6.2},{T27F6.4} 702 CB6890_redo I 12862392 1 T A 255 1.00 63 62 0 28 28 @AAaaAaaAaaAAaAAAaaAaaAAaaaaA point 0 SNP none {haw13170} 703 CB6890_redo I 12871730 1 T C 255 1.00 63 62 0 27 27 @cCCccCccccccCcccccCCCCCCcCC point 0 nongenic,nongenic -2184 upstream,-6853 upstream {Y18D10A.23},{Y18D10A.13} 704 CB6890_redo I 12871733 1 T C 255 1.00 63 62 0 28 28 @CCccCccccccCcccccCCCCCCcCCcC point 0 SNP none {uCE1-1387} 707 CB6890_redo I 12899398 1 T G 3 3.69 0 18 2 7 9 @G.GGGGG,G point 0 nongenic,nongenic -29852 upstream,3373 into {Y18D10A.23},{Y18D10A.13} 710 CB6890_redo I 12899563 1 T G 3 2.62 0 12 1 4 5 @GGGG, point 0 nongenic,nongenic -30017 upstream,3208 into {Y18D10A.23},{Y18D10A.13} 711 CB6890_redo I 12899593 1 T G 3 2.31 0 16 2 8 10 @,GG,GGGGGG point 0 nongenic,nongenic -30047 upstream,3178 into {Y18D10A.23},{Y18D10A.13} 714 CB6890_redo I 12909922 1 T A 165 1.00 63 62 6 14 20 @...,A.,aaaaAAAaAaAaA point 0 nongenic -6507 upstream {Y18D10A.25} 715 CB6890_redo I 12910874 1 C T 137 1.81 37 62 0 19 19 @tTttttttTTTTTTTTTTt point 0 nongenic -5555 upstream {Y18D10A.25} 717 CB6890_redo I 13015757 1 T C 255 1.00 63 62 0 28 28 @cCCCcCCccccCccCCCccCCCCCCCcc point 0 nongenic,nongenic,nongenic,nongenic -17855 upstream,3550 into,4308 into,7524 into {W05B5.4},{ZK256.1b},{ZK256.1c},{ZK256.1a} 718 CB6890_redo I 13015767 1 T C 255 1.00 63 62 0 19 19 @cCccCCCccCCCCCCCccc point 0 nongenic,nongenic,nongenic,nongenic -17845 upstream,3560 into,4318 into,7514 into {W05B5.4},{ZK256.1b},{ZK256.1c},{ZK256.1a} 719 CB6890_redo I 13015797 1 T C 219 7.88 63 62 0 13 13 @ccccccccccccc point 0 nongenic,nongenic,nongenic,nongenic -17815 upstream,3590 into,4348 into,7484 into {W05B5.4},{ZK256.1b},{ZK256.1c},{ZK256.1a} 720 CB6890_redo I 13118108 1 T C 255 9.50 63 62 0 29 29 @CCccCccCCcCcCCCCcCcCcCccCcccc point 0 nongenic -2971 upstream {C17H1.9} 721 CB6890_redo I 13168446 1 C G 255 1.00 63 62 0 32 32 @gGggGGGGgggGGgGgGgGGGGGgGGgggggG point 0 missense,SNP CAC->GAC[His->Asp],none {F22G12.5},{haw13520} 729 CB6890_redo I 13419807 1 T A 255 1.00 63 62 0 46 46 @aAaaAAaaaaaaAaaaaaAAaaAAaaaaAaAAaAaaAaAaaaaAaa point 0 SNP none {haw14087} 730 CB6890_redo I 13482732 1 G T 255 1.12 63 62 0 27 27 @ttTTTttttTTtTTtTTtTTttTtTTT point 0 nongenic,nongenic,nongenic -6815 upstream,-8558 upstream,4661 into {Y48G10A.1.1},{Y48G10A.3},{Y48G10A.2} 732 CB6890_redo I 13491128 1 A T 162 1.00 63 62 0 8 8 @tTTTTTTt point 0 three_prime_UTR none {Y48G10A.1.1} 733 CB6890_redo I 13491129 1 A T 170 1.00 63 62 0 10 10 @tTTTTTTtTt point 0 three_prime_UTR none {Y48G10A.1.1} 737 CB6890_redo I 13545592 1 T G 63 1.00 63 62 6 6 12 @.,,,GGgG,GG, point 0 nongenic -415 upstream {Y87G2A.4} 738 CB6890_redo I 13545596 1 G T 62 1.31 63 62 9 10 19 @.,,,TTtT,TT,,TT.TT. point 0 nongenic -419 upstream {Y87G2A.4} 744 CB6890_redo I 13584208 1 A C 255 3.31 63 62 0 32 32 @CcCCccCCcccCccccCccCcCcccCcCcccC point 0 nongenic 1077 into {Y87G2A.9} 755 CB6890_redo I 13860804 1 C T 181 1.12 63 62 0 8 8 @tttttttt point 0 SNP none {haw14642} 756 CB6890_redo I 13860835 1 G C 255 1.00 63 62 0 15 15 @cccccccccCcCCCC point 0 SNP none {haw14643} 759 CB6890_redo I 13985036 1 A G 255 1.00 63 62 0 27 27 @GGGgGgGgggGGgGGgGgGggggGGgg point 0 missense,SNP AAA->GAA[Lys->Glu],none {Y71A12B.17},{haw14760} 761 CB6890_redo I 14002390 1 T G 171 9.00 63 62 13 47 60 @GGGGGGGa..GGA.aGGGGGGAGGGG...,A.....gG.GggggggggggGggggggggG point 0 SNP none {haw14764} 767 CB6890_redo I 14049137 1 T C 226 1.00 63 62 0 8 8 @ccCCCCCC point 0 SNP none {uCE1-1488} 770 CB6890_redo I 14097922 1 T C 255 1.00 63 62 0 20 20 @CCCcCCcCCCCccCCcCcCc point 0 nongenic,nongenic,nongenic -1588 upstream,-3341 upstream,381 into {Y63D3A.2},{Y63D3A.5.1},{Y63D3A.4} 771 CB6890_redo I 14121557 1 T C 81 1.00 63 22 3 5 8 @cCcCC,.. point 0 nongenic 2813 into {K03D10.3} 162985 CB6890_redo I 14137879 163 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 4150 to 4313 bp into {K03D10.1} 784 CB6890_redo I 14244891 1 G C 108 1.00 63 62 1 6 7 @Cc.ccCc point 0 nongenic,nongenic -1323 upstream,-471 upstream {C49A1.6},{C49A1.10} 785 CB6890_redo I 14279506 1 A G 10 1.00 63 52 1 3 4 @gg.g point 0 nongenic -5313 upstream {F09C3.2} 792 CB6890_redo I 14326887 1 G C 8 1.00 63 62 3 4 7 @,C.c.cc point 0 nongenic,nongenic -4184 upstream,2027 into {F49B2.6},{F49B2.5} 797 CB6890_redo I 14347419 1 C A 255 1.00 63 62 0 32 32 @AaAAAaaAAaAaaaAAAAAAAaaaaaaaAaAa point 0 nongenic,nongenic -3626 upstream,81 downstream {Y105E8A.1},{Y105E8A.2} 803 CB6890_redo I 14362092 1 G T 255 1.00 63 62 0 25 25 @tTTTtTTtttTtTTTtttttTTTtT point 0 SNP none {haw15184} 804 CB6890_redo I 14363822 1 A T 255 4.94 63 62 0 14 14 @tttttTTTTTTTTT point 0 nongenic,nongenic -5509 upstream,3757 into {Y105E8A.2},{Y105E8A.3} 805 CB6890_redo I 14363832 1 T C 255 3.62 63 62 0 18 18 @ccCCCCCCCCCCCCCCCC point 0 nongenic,nongenic -5519 upstream,3747 into {Y105E8A.2},{Y105E8A.3} 162987 CB6890_redo I 14391806 117 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1486 to 1603 bp into {Y105E8A.7a,Y105E8A.7b} 162988 CB6890_redo I 14425416 268 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered,uncovered,uncovered non-exonic, 3016 to 3284 bp into,non-exonic, 3249 to 3517 bp into,non-exonic, 7188 to 7456 bp into,non-exonic, 7232 to 7500 bp into {Y105E8A.10c.1},{Y105E8A.10b},{Y105E8A.10c.2},{Y105E8A.10a} 810 CB6890_redo I 14431046 1 C A 255 1.00 63 62 0 24 24 @aAAaaAAaAaaaAaaaAaaaaaAA point 0 SNP none {haw15294} 821 CB6890_redo I 14480479 1 G A 255 1.00 63 62 0 29 29 @AAAAAAAAAAaaaAAAaAAAAAAaAaaAa point 0 SNP none {haw15337} 822 CB6890_redo I 14493122 1 T G 13 1.00 63 0 0 5 5 @GGGGG point 0 nongenic,nongenic,nongenic,nongenic -6372 upstream,2118 into,2121 into,3368 into {Y105E8A.19},{Y105E8A.20a.2},{Y105E8A.20a.1},{Y105E8A.20b} 840 CB6890_redo I 14518026 1 C G 255 1.06 63 62 0 12 12 @GggGGgGggGGG point 0 SNP none {haw15420} 842 CB6890_redo I 14574065 1 A G 103 1.81 63 62 0 14 14 @GggGGGGgGgGgGG point 0 nongenic,nongenic,nongenic -8233 upstream,4561 into,6747 into {Y105E8A.23a,Y105E8A.23b},{Y105E8A.24b},{Y105E8A.24a} 843 CB6890_redo I 14586339 1 A C 255 1.00 63 62 1 38 39 @CCC.cCCccCCCcCcCCccCCcCCccccccCcCCcCcCC point 0 SNP none {haw15496} 845 CB6890_redo I 14610358 1 C T 184 2.50 63 62 0 10 10 @tttttttttt point 0 nongenic -6231 upstream {Y105E8A.25} 848 CB6890_redo I 14610447 1 A G 221 1.38 63 62 0 13 13 @GGGGGGGGGGGGG point 0 nongenic -6320 upstream {Y105E8A.25} 864 CB6890_redo I 14675915 1 A T 255 1.00 63 62 0 31 31 @TTTttTTTTTTTtttTTTTTttttTTTtTtt point 0 SNP none {haw15602} 884 CB6890_redo I 14918627 1 A C 255 1.00 63 62 0 21 21 @ccCcCcCCCcCCccCcCcccc point 0 SNP none {haw15977} 885 CB6890_redo I 14992501 1 A C 13 1.00 63 2 0 5 5 @ccccc point 0 nongenic -1306 upstream {ZK337.1a.2,ZK337.1b.2,ZK337.1c.2} 886 CB6890_redo I 14992503 1 A C 3 1.00 63 12 0 5 5 @ccccg point 0 nongenic -1304 upstream {ZK337.1a.2,ZK337.1b.2,ZK337.1c.2} 889 CB6890_redo I 15040328 1 T C 255 1.00 63 62 0 30 30 @CccCcccCcccccCCCCcCCccCCCcCccc point 0 silent,SNP ATT->ATC[Ile->Ile],none {F31C3.2a,F31C3.2b},{haw16048} 890 CB6890_redo I 15067997 1 A G 37 1.81 63 20 4 23 27 @GGG.GG.GgG.tg.ggggggggGgggg point 0 ncRNA,SNP none,none {F31C3.9},{snp_F31C3[4]} 894 CB6890_redo I 15071623 1 G A 12 2.50 0 2 0 4 4 @AAAA point 0 nongenic -12632 upstream {F31C3.6a} 895 CB6890_redo I 15071625 1 C G 12 2.50 0 2 0 4 4 @GGGG point 0 nongenic -12634 upstream {F31C3.6a} 896 CB6890_redo I 15071631 1 A G 12 2.50 0 0 0 4 4 @GGGG point 0 nongenic -12640 upstream {F31C3.6a} 903 CB6890_redo II 14881 1 G A 255 1.00 63 62 0 34 34 @aAaaaaaaAaAAaaAaaAAaaAAAAAaaAaaAAA point 0 silent CTG->CTA[Leu->Leu] {C01B12.3} 904 CB6890_redo II 26348 1 G A 255 1.00 63 62 0 31 31 @AaaaaaaAAaAaaaaaAaAAaaaaaAaAaaA point 0 nongenic,nongenic 912 downstream,942 into {C01B12.8},{F23F1.4} 905 CB6890_redo II 213640 1 C G 34 1.00 63 30 1 3 4 @GgG, point 0 silent CCG->CCC[Pro->Pro] {F48A11.4} 907 CB6890_redo II 232985 1 A G 4 1.00 63 62 3 7 10 @GGGGG,gg,, point 0 nongenic,nongenic,nongenic -244 upstream,-246 upstream,408 downstream {Y43H11AL.1.1},{Y43H11AL.1.3},{Y43H11AL.2} 910 CB6890_redo II 310806 1 G A 255 1.69 63 62 0 36 36 @AaAaaaaaaaAaAaAAaaAaaaaaAaaAAAaaaaaa point 0 five_prime_UTR none {K01A2.8a,K01A2.8c.1,K01A2.8c.2} 911 CB6890_redo II 483442 1 G A 255 1.00 63 62 0 35 35 @AaAAaAAaAaAAaAAAAaaaaaaaaAaaAAaAAaA point 0 nongenic,nongenic -1422 upstream,944 into {W07E6.4},{W07E6.2} 162991 CB6890_redo II 503968 167 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1879 to 2046 bp into {T27A1.1} 162992 CB6890_redo II 504187 418 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1409 to 1827 bp into {T27A1.1} 6324 CB6890_redo II 523339 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @,.,,ggg indel 0 nongenic,nongenic,nongenic -3251 upstream,-738 downstream,-746 downstream {T27A1.4},{T27A1.5a.2,T27A1.5b.2},{T27A1.5a.1,T27A1.5b.1} 913 CB6890_redo II 523340 1 C G 9 1.00 63 4 3 4 7 @GgGG... point 0 nongenic,nongenic,nongenic -3249 upstream,740 into,748 into {T27A1.4},{T27A1.5a.2,T27A1.5b.2},{T27A1.5a.1,T27A1.5b.1} 914 CB6890_redo II 567011 1 G A 255 1.00 63 62 0 38 38 @AaaAAaAAAaAaAAaaaAAaAAAaaaaaaAaaaAaAaA point 0 nongenic 1248 into {W08F4.5} 915 CB6890_redo II 583628 1 G A 255 1.12 63 62 0 47 47 @AaAAAAAAAaAAAAAAAAAAaAAAAaaaAAaaAAaaAAAAaaaAAaa point 0 nongenic,nongenic,nongenic -1205 upstream,-880 upstream,551 into {W08F4.13},{W08F4.9},{W08F4.12} 916 CB6890_redo II 632436 1 C G 13 1.00 63 2 0 5 5 @ggggg point 0 nongenic,nongenic -1853 upstream,450 downstream {T04B8.1},{T04B8.2} 918 CB6890_redo II 681186 1 G A 255 1.00 63 62 0 26 26 @AAAaaAaaaAAAaAaAAAAaaaaaAA point 0 silent AGG->AGA[Arg->Arg] {T02H6.8} 937 CB6890_redo II 725379 1 T G 21 1.88 63 24 4 12 16 @,GGGGGGGGG.GgG,. point 0 nongenic,nongenic 1479 into,1586 into {Y39F10B.1b},{Y39F10B.1a} 938 CB6890_redo II 777128 1 G A 255 1.69 63 62 0 39 39 @AaaAaAaaAAAAaAaaaaAAaaaaAAaaaaAaaAaaaAA point 0 nongenic 406 downstream {Y39F10A.1} 941 CB6890_redo II 935804 1 A G 255 1.00 63 62 0 29 29 @GggGGGGGGGGGgGgGGGGgggGGGggGg point 0 silent AAA->AAG[Lys->Lys] {R07C3.4} 942 CB6890_redo II 959061 1 A T 255 1.00 63 62 0 41 41 @ttTTttTTttTtTTtTtTtTTTTtttTTttttTtTtTTtTT point 0 nongenic,nongenic -1472 upstream,95 into {C32B5.7},{C32B5.16} 949 CB6890_redo II 1221570 1 T G 12 1.00 63 62 7 7 14 @,,,,,,,ggGGgGg point 0 nongenic,nongenic -2786 upstream,9217 into {F53A10.2c},{F53A10.2a} 950 CB6890_redo II 1221572 1 G A 143 1.00 63 12 4 7 11 @,,,,aaAAaAa point 0 SNP none {haw17694} 951 CB6890_redo II 1298438 1 A C 22 1.00 63 62 1 6 7 @.GCcccc point 0 nongenic -61 upstream {Y57G7A.1} 952 CB6890_redo II 1333323 1 C G 214 1.19 63 62 0 10 10 @ggggggGggG point 0 nongenic,nongenic -3747 upstream,6323 into {F56D12.4b,F56D12.4c.2},{F56D12.4a} 953 CB6890_redo II 1392498 1 T C 255 1.00 63 62 0 42 42 @CCCcccCCcCcccCcccccccCccCCCCCCCccCcccccCCC point 0 nongenic,nongenic 924 downstream,995 downstream {F54D12.3},{F54D12.11} 963 CB6890_redo II 1505513 1 A G 5 1.00 63 0 2 3 5 @GGG.. point 0 nongenic,nongenic,nongenic -5175 upstream,754 into,942 into {H17B01.4b.1},{H17B01.1b},{H17B01.1a} 6329 CB6890_redo II 1577786 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @..,.gggg indel 0 inframe none {T07H3.3a} 975 CB6890_redo II 1637578 1 C G 195 0.00 63 62 0 6 6 @ggggGG point 0 nongenic 884 into {ZC204.4a,ZC204.4b} 976 CB6890_redo II 1637579 1 G C 194 0.00 63 62 0 6 6 @ccccCC point 0 nongenic 885 into {ZC204.4a,ZC204.4b} 978 CB6890_redo II 1643843 1 A G 3 7.75 0 2 8 14 22 @GCCgCg.C,ggg,,.ggg,g,, point 0 nongenic,nongenic -3243 upstream,408 downstream {ZC204.5},{ZC204.6} 980 CB6890_redo II 1662680 1 G A 255 1.00 63 62 0 35 35 @AaaaAAAaAAAaaaaAaaaAaAaaAAAAAaAaaaa point 0 nongenic,nongenic -1119 upstream,-199 upstream {ZC204.2},{ZC204.14} 981 CB6890_redo II 1669454 1 G A 255 1.00 63 62 0 25 25 @AaaAAaaAaaaaAaAaaAAaaaAaa point 0 nongenic,nongenic -1381 upstream,-437 upstream {F58E1.6a,F58E1.6b},{ZC204.15} 983 CB6890_redo II 1700442 1 C G 3 1.00 63 0 1 4 5 @GGGG. point 0 nongenic -4611 upstream {F58E1.13} 985 CB6890_redo II 1700445 1 T G 16 1.00 63 0 0 5 5 @GGGgg point 0 nongenic -4614 upstream {F58E1.13} 988 CB6890_redo II 1790705 1 G A 255 1.00 63 62 0 30 30 @aaaaAAAAAAAaaAAAAAAAAAAaaAAAaa point 0 nongenic,nongenic -7149 upstream,512 downstream {C08F1.1},{C08F1.3} 989 CB6890_redo II 1793627 1 G A 162 2.25 63 62 7 40 47 @AaaaAaaAaaaaaAAAaaa,aaAAaaaAAA,,,AaAAAaaA,,A,AA point 0 nongenic -4227 upstream {C08F1.1} 992 CB6890_redo II 1850518 1 G A 255 1.00 63 62 0 34 34 @AaaAaaaAaAaAAaAAaaAaaAaaaaAaAAAAaa point 0 nongenic,nongenic -117 upstream,-727 upstream {C52E2.7},{C52E2.3} 993 CB6890_redo II 1850708 1 T C 255 1.00 63 62 0 22 22 @CcCcCcCCCccCCCcCCccccC point 0 nongenic,nongenic -307 upstream,-537 upstream {C52E2.7},{C52E2.3} 997 CB6890_redo II 1862308 1 C G 89 2.00 63 62 2 10 12 @gGGGGGGGG.g, point 0 nongenic,nongenic -327 upstream,900 downstream {C16C4.6},{C16C4.7} 998 CB6890_redo II 1862309 1 G A 77 2.06 63 28 3 8 11 @AAAAAAAA.., point 0 nongenic,nongenic -326 upstream,901 downstream {C16C4.6},{C16C4.7} 999 CB6890_redo II 1862310 1 A C 64 2.06 63 22 1 10 11 @CCCCCCCCcg, point 0 nongenic,nongenic -325 upstream,902 downstream {C16C4.6},{C16C4.7} 1000 CB6890_redo II 1901588 1 G A 255 1.00 63 62 0 38 38 @aAAaAAAaaaaAAAaaaaAAAaAAAAAaAaAAAAAAaA point 0 missense GCA->ACA[Ala->Thr] {C46F9.3} 1001 CB6890_redo II 1906691 1 G T 93 1.38 63 34 0 5 5 @TtTtt point 0 nongenic,nongenic -1471 upstream,629 downstream {F52C6.5},{C46F9.1} 1002 CB6890_redo II 1906692 1 A T 87 1.25 63 34 0 4 4 @tTtt point 0 nongenic,nongenic -1470 upstream,630 downstream {F52C6.5},{C46F9.1} 1003 CB6890_redo II 1906693 1 T G 35 1.25 63 62 1 3 4 @Ggg. point 0 nongenic,nongenic -1469 upstream,631 downstream {F52C6.5},{C46F9.1} 1004 CB6890_redo II 1926841 1 T C 63 1.00 63 42 1 4 5 @CcCC. point 0 silent GCT->GCC[Ala->Ala] {F52C6.2.1,F52C6.2.2,F52C6.2.3,F52C6.2.4} 1005 CB6890_redo II 1926842 1 C T 43 1.00 63 62 2 3 5 @TtT,. point 0 missense CCG->TCG[Pro->Ser] {F52C6.2.1,F52C6.2.2,F52C6.2.3,F52C6.2.4} 1009 CB6890_redo II 1976586 1 T C 3 8.31 0 2 4 12 16 @.,,cc.cccccccccc point 0 nongenic -8648 upstream {ZK250.9} 1011 CB6890_redo II 2001658 1 A C 108 2.12 63 62 0 9 9 @CCCCCCCCC point 0 nongenic,nongenic -1719 upstream,-836 upstream {F59H6.5},{C40D2.4} 1012 CB6890_redo II 2010559 1 G A 255 1.62 63 62 3 50 53 @AaAAAAAaAAaAaaaAAaaaAAAaaaaAAAaaa...aaaaaAaAaaAaaAaaA point 0 nongenic,nongenic -91 upstream,928 downstream {F59H6.4},{F59H6.6} 1014 CB6890_redo II 2096143 1 G A 255 1.00 63 62 0 30 30 @AAAaaAAAAaaaaaaAaaaaAAaAAaaaAa point 0 nongenic,nongenic,nongenic -2292 upstream,-2728 upstream,839 into {T16A1.8},{T16A1.1b},{T16A1.2} 1018 CB6890_redo II 2171493 1 T A 3 2.56 0 0 1 6 7 @ACAAA.g point 0 nongenic -2737 upstream {C33C12.5} 1020 CB6890_redo II 2190806 1 T C 255 1.00 63 62 0 22 22 @cccCcCCcCCcCCccCcCccCC point 0 nongenic -1347 upstream {C33C12.9} 1021 CB6890_redo II 2210774 1 G A 255 1.06 63 62 0 23 23 @AaAAAAAaaAAAAAaAAaAaaAa point 0 nongenic,nongenic -6643 upstream,2091 into {Y59C2A.2},{Y59C2A.1} 1022 CB6890_redo II 2224202 1 G A 255 1.88 63 62 0 29 29 @AAAaAAaaAAaAAaaAAAaAaaAaAAAAA point 0 nongenic,nongenic -660 upstream,156 downstream {F54A3.4},{F54A3.5.1,F54A3.5.2} 1023 CB6890_redo II 2225250 1 G T 90 1.81 35 62 0 8 8 @ttTtTttT point 0 nongenic,nongenic,nongenic,nongenic -1708 upstream,460 into,462 into,569 downstream {F54A3.4},{F54A3.5.2},{F54A3.5.1},{F54A3.6} 1024 CB6890_redo II 2225256 1 A T 28 1.50 63 22 0 6 6 @TttTtt point 0 nongenic,nongenic,nongenic,nongenic -1714 upstream,454 into,456 into,563 downstream {F54A3.4},{F54A3.5.2},{F54A3.5.1},{F54A3.6} 1028 CB6890_redo II 2225271 1 A C 69 1.00 63 6 0 4 4 @ccCC point 0 nongenic,nongenic,nongenic,nongenic -1729 upstream,439 into,441 into,548 downstream {F54A3.4},{F54A3.5.2},{F54A3.5.1},{F54A3.6} 1032 CB6890_redo II 2265075 1 T C 18 1.00 63 10 0 4 4 @cccc point 0 nongenic,nongenic -1988 upstream,362 into {K09F6.2},{K09F6.4} 1033 CB6890_redo II 2265078 1 G C 15 1.00 63 18 2 3 5 @c..cc point 0 nongenic,nongenic -1985 upstream,359 into {K09F6.2},{K09F6.4} 1035 CB6890_redo II 2351999 1 G A 255 1.00 63 62 0 22 22 @aaAAAAAaAAaaAaAaaaaAaa point 0 nongenic,nongenic -1316 upstream,-340 upstream {F43C11.3},{F43C11.10} 1036 CB6890_redo II 2432133 1 G A 255 1.00 63 62 0 35 35 @AaaaAaAaAaAAaAaaaaAaaaaAaaAAAAAaaAa point 0 nongenic,nongenic -11159 upstream,-2187 upstream {T22D2.1},{F42G2.6} 1037 CB6890_redo II 2472169 1 C T 230 1.00 63 62 0 21 21 @ttttttttttttttttttttt point 0 SNP none {haw20431} 1038 CB6890_redo II 2473986 1 G A 255 1.00 63 62 0 29 29 @AaAAaAaaAaaAaaaAaAAaaaAAaaAAa point 0 three_prime_UTR none {F53G2.7.1,F53G2.7.2} 1044 CB6890_redo II 2571180 1 G A 255 1.00 63 62 0 16 16 @AAaaAAAAAAAAAAAa point 0 nongenic,nongenic -7501 upstream,4725 into {K02F6.9},{F09D1.1} 1045 CB6890_redo II 2587929 1 G A 255 1.12 63 62 0 17 17 @AAaaaAaAAaAAAaAAA point 0 missense GCA->ACA[Ala->Thr] {F33H12.2} 1047 CB6890_redo II 2635050 1 G A 255 1.00 63 62 0 42 42 @aAaAaaAAAAAAAAAAaAAaaAAaAaAAaaAaAAaAAAAaAA point 0 nongenic 310 downstream {F22E5.21} 1048 CB6890_redo II 2635417 1 G A 255 1.00 63 62 0 24 24 @aaAaaaaaaAAaAAAAAAAAAAAA point 0 missense CCC->TCC[Pro->Ser] {F22E5.21} 1049 CB6890_redo II 2636606 1 G A 255 1.00 63 62 0 28 28 @AaAAAAAAaaAaAAaAaAAAaAaAaaaa point 0 nongenic,nongenic -1796 upstream,1004 into {F22E5.9},{F22E5.21} 1050 CB6890_redo II 2676254 1 T C 255 1.38 63 62 0 21 21 @CCCccCCcccCcccCcccccc point 0 silent GAT->GAC[Asp->Asp] {F22E5.1} 1051 CB6890_redo II 2676255 1 A G 255 1.38 63 62 0 21 21 @GGGggGGgggGgggGgggggg point 0 missense ATT->GTT[Ile->Val] {F22E5.1} 1052 CB6890_redo II 2676257 1 T A 255 1.44 63 62 0 19 19 @AaaAAaaaAaaaAaaaaaa point 0 silent ATT->ATA[Ile->Ile] {F22E5.1} 1054 CB6890_redo II 2703217 1 C T 234 1.00 63 62 0 13 13 @tGGttGtttTTTt point 0 nongenic,nongenic -359 upstream,203 downstream {Y47G7B.3},{Y47G7B.1} 1056 CB6890_redo II 2799760 1 A T 255 1.00 63 62 0 20 20 @tttttTttTtttTtTTtTtt point 0 SNP none {haw21113} 1059 CB6890_redo II 2818720 1 C T 76 1.00 63 62 4 6 10 @TTttt..t,. point 0 nongenic,nongenic,nongenic -3176 upstream,403 into,713 downstream {K12H6.2},{K12H6.11},{K12H6.3} 1060 CB6890_redo II 2843349 1 G C 131 1.00 63 62 0 10 10 @CccccCCacc point 0 nongenic -161 upstream {Y110A2AL.7} 1064 CB6890_redo II 2881248 1 A G 61 0.00 63 42 2 3 5 @ggg,, point 0 nongenic,nongenic 2296 into,678 into {Y110A2AL.12a},{Y110A2AL.12b} 1065 CB6890_redo II 2881249 1 T C 43 0.00 63 60 2 3 5 @ccc,, point 0 nongenic,nongenic 2297 into,677 into {Y110A2AL.12a},{Y110A2AL.12b} 1071 CB6890_redo II 2897879 1 A T 39 3.31 63 62 27 52 79 @Ttttttt.t.,,tT,,t.,ttTt,tt,t,.ttt.tt,t.tt,,.ttTt,t.Tt.tttttTtt.tttttT,,ttttt,.. point 0 SNP none {haw21398} 1072 CB6890_redo II 2897887 1 T G 33 4.38 63 62 20 37 57 @,gg,g,.ggg.gg,g.gg,,.ggGg,g.Gg.gggggGgg.gggggG,,ggggg,.., point 0 nongenic,nongenic -3492 upstream,1154 into {Y110A2AL.14.1},{Y110A2AM.3} 1073 CB6890_redo II 2898896 1 T A 191 1.12 63 62 16 34 50 @,AaaaA,,Aa,aaA,GaaAAaa,aa,a.aa,Aa,aaa,,a,aAa,a,,aa point 0 nongenic,nongenic -4501 upstream,1450 into {Y110A2AL.14.1},{Y110A2AM.3} 1074 CB6890_redo II 2900766 1 A T 163 1.00 63 62 0 6 6 @TTTTTT point 0 three_prime_UTR none {Y110A2AM.4} 1075 CB6890_redo II 2900772 1 T A 105 1.00 63 0 0 4 4 @AAAA point 0 three_prime_UTR none {Y110A2AM.4} 162995 CB6890_redo II 2900776 84 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 224 to 308 bp into {Y110A2AM.4} 1076 CB6890_redo II 2900872 1 C A 255 1.00 63 62 0 11 11 @aaAAaAAaaaa point 0 three_prime_UTR none {Y110A2AM.4} 1077 CB6890_redo II 2900873 1 G T 255 1.00 63 62 0 12 12 @ttTTtTTttttt point 0 three_prime_UTR none {Y110A2AM.4} 1087 CB6890_redo II 2980115 1 G A 255 1.19 63 62 2 20 22 @aAaAAAaAAaAAAaaaAa,,aa point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -8186 upstream,1705 into,1712 into,3482 into,726 into,811 into {K08A2.4},{K08A2.5a.2},{K08A2.5a.1},{K08A2.5a.3},{K08A2.5c.2},{K08A2.5c.1} 1091 CB6890_redo II 3103165 1 G A 255 1.00 63 62 0 28 28 @aaAaaAaaAAAAaAaaaaAAAAaAaAAA point 0 nongenic,nongenic,nongenic,splice_acceptor -2523 upstream,-2894 upstream,853 into,none {Y25C1A.12},{Y25C1A.3},{Y25C1A.4},{Y25C1A.4} 1092 CB6890_redo II 3159113 1 G A 255 1.00 63 62 0 40 40 @aaaaaaaaaAAAAaaAAAaaaaaaaAaaAaAAAaAaaaaA point 0 nongenic -32 upstream {Y27F2A.7} 1100 CB6890_redo II 3220883 1 G A 255 1.00 63 62 1 31 32 @AaAAaaaaAAAaAAaAaaAa.aaaaaAAAAaC point 0 nongenic 309 downstream {ZC239.14} 1114 CB6890_redo II 3278964 1 T A 255 1.00 63 62 0 35 35 @aAaaAaaaaaAaaAAaaAaaaaAAAaaaaaAAAaa point 0 SNP none {haw22209} 1121 CB6890_redo II 3531441 1 C G 17 9.25 63 14 2 7 9 @gGGGGGG,, point 0 nongenic -2930 upstream {W09G10.3} 1122 CB6890_redo II 3532125 1 C G 227 9.88 63 62 0 9 9 @gggggggGg point 0 nongenic,nongenic,nongenic -3614 upstream,470 downstream,758 downstream {W09G10.3},{W09G10.4a},{W09G10.4b} 1125 CB6890_redo II 3551202 1 G A 255 1.00 63 62 0 13 13 @aAaAaaAaaaaaA point 0 missense GAA->AAA[Glu->Lys] {W10G11.19} 1126 CB6890_redo II 3650567 1 C A 255 1.00 63 62 0 31 31 @aaaAaAaAAAaAaaAAAAaAaaaaaaAaaAa point 0 nongenic -682 upstream {F19B10.11} 1127 CB6890_redo II 3796556 1 C T 111 2.12 63 62 20 229 249 @,g,t,Tt.,tt.,,TTTTgt,TTtGTGGtTTGGG.GTTGtgGGTGGTTGGtgg.tgTTTGT,,GtGGtTTGGtGGGTTTGGGTGGGTGTGtGTTGTGtT point 0 silent ACC->ACT[Thr->Thr] {Y8A9A.2} 6345 CB6890_redo II 3796666 0 X X -1000 -999.99 -1000 -1000 10 16 26 @,,,,,,,..,gaagGGGGGGG indel 0 inframe none {Y8A9A.2} 1131 CB6890_redo II 3797059 1 C T 51 6.12 35 62 2 84 86 @TTtTTTttTtttTtttttt.tTt,TttttTtttttttttttttttttTttttttttTTtttttttttttttTgttttttttttttt point 0 missense CCG->CTG[Pro->Leu] {Y8A9A.2} 1133 CB6890_redo II 3797266 1 T A 55 3.56 30 62 19 21 40 @Caaaa,aaa,.,,,,,,.,.AA,aAAaA,,A,AA,Aa.,A point 0 missense CTG->CAG[Leu->Gln] {Y8A9A.2} 1134 CB6890_redo II 3797353 1 A T 210 3.56 63 62 21 28 49 @TT,,TTTTT,TTT,..T...,ttTTTt,tt.Tt..t.t.t..Tt,t..t point 0 missense CAT->CTT[His->Leu] {Y8A9A.2} 1135 CB6890_redo II 3856031 1 G A 255 1.06 63 62 0 25 25 @AAaaaaaaAAAAaaaaaaaAaaaaa point 0 nongenic,splice_donor 118 into,none {C49D10.7},{C49D10.7} 1140 CB6890_redo II 4142478 1 C G 255 1.00 63 62 0 10 10 @gGggggGgGg point 0 nongenic -331 upstream {F56D3.1.2} 1141 CB6890_redo II 4142481 1 G A 255 1.00 63 62 0 15 15 @aAaaaaAaAaaaaaa point 0 nongenic -328 upstream {F56D3.1.2} 1142 CB6890_redo II 4142501 1 A T 255 1.00 63 62 0 25 25 @ttttttTttTTTTtttTTttTtTtt point 0 nongenic -308 upstream {F56D3.1.2} 1144 CB6890_redo II 4260994 1 T C 3 5.69 0 2 6 10 16 @ccccccc,,c,c,,,c point 0 nongenic,nongenic -15212 upstream,-2218 upstream {C01F1.4},{C16A11.8} 1148 CB6890_redo II 4296769 1 C G 90 1.00 63 34 0 4 4 @GGgg point 0 nongenic,nongenic,nongenic -1534 upstream,-8565 upstream,1676 into {C01F1.3b},{C01F1.6},{C01F1.3a} 1158 CB6890_redo II 4349474 1 C A 11 1.00 63 10 1 3 4 @AAA. point 0 nongenic,nongenic -1718 upstream,1506 into {H20J04.9},{H20J04.2} 1164 CB6890_redo II 4399212 1 G C 92 1.00 63 62 1 5 6 @C,CCCC point 0 nongenic,nongenic -6642 upstream,5636 into {ZK430.5},{ZK430.8} 1165 CB6890_redo II 4453938 1 G A 255 1.00 63 62 0 29 29 @AaAAAAAAaaaaAaAAaAAAaaAaaAaAa point 0 nongenic -795 upstream {T12C9.3} 1166 CB6890_redo II 4468036 1 G T 255 1.00 63 62 0 35 35 @tTTtttttTtTttTtTtttttTtttTTttTtTTTt point 0 SNP none {haw24704} 1167 CB6890_redo II 4468046 1 G T 255 1.00 63 62 0 36 36 @ttttTtTttTtTtttttTtttTTttTtTTTtTTTtt point 0 nongenic,nongenic -114 upstream,159 downstream {W06B4.2},{W06B4.3} 1170 CB6890_redo II 4484308 1 T C 75 1.00 63 62 1 4 5 @CCCC, point 0 nongenic -595 upstream {T05C1.2} 1171 CB6890_redo II 4492564 1 T A 10 1.00 63 62 4 5 9 @aaaAa,.., point 0 SNP none {haw24745} 1172 CB6890_redo II 4499374 1 G C 255 1.00 63 62 0 29 29 @CCCccccCcCCCCCCccCcccCCCccCCc point 0 SNP none {haw24761} 1174 CB6890_redo II 4510486 1 G C 15 1.00 63 4 1 3 4 @.ccc point 0 nongenic,nongenic -1712 upstream,-5350 upstream {B0304.3},{T05C1.4a,T05C1.4b} 1175 CB6890_redo II 4574472 1 G A 255 1.00 63 62 0 26 26 @AaaAAAaaaAaaAAAAAAaAaAAaaA point 0 nongenic 2485 into {M03A1.1a,M03A1.1b} 1176 CB6890_redo II 4642240 1 C T 96 5.19 33 2 0 13 13 @aTTtTTTTTtttt point 0 nongenic,nongenic -3910 upstream,-6841 upstream {F35D11.11a,F35D11.11b,F35D11.11c},{Y74E4A.1b} 1185 CB6890_redo II 4737514 1 G C 17 1.00 63 20 2 2 4 @,,cc point 0 nongenic,nongenic,nongenic -120 upstream,-89 upstream,675 downstream {F41C3.5.2},{F41C3.5.1},{F41C3.6} 1186 CB6890_redo II 4780803 1 C T 255 1.00 63 62 0 26 26 @ttttTTTtTTTTTTTttttTtTattT point 0 nongenic 534 into {F26G1.6} 1198 CB6890_redo II 4929759 1 C A 255 1.44 63 62 0 24 24 @aaaaaaAAaaaaaAaAAAaaAaaa point 0 SNP none {haw25053} 1199 CB6890_redo II 4964576 1 C A 255 1.00 63 62 0 31 31 @aaaaaaAAaAaAAAAAaAaaaAAAaAaAAAa point 0 SNP none {haw25061} 1200 CB6890_redo II 4966820 1 G A 255 1.00 63 62 0 36 36 @aAaaaAaaAAAaaaAaaaaaAAAAAAaaAAAAAaaA point 0 nongenic,nongenic -2367 upstream,-6958 upstream {T27F7.2b.2},{Y38A8.3} 1201 CB6890_redo II 5021688 1 C G 79 1.00 63 22 1 4 5 @gggG. point 0 nongenic -1059 upstream {F59A6.1} 1202 CB6890_redo II 5021689 1 G C 57 1.00 63 22 1 3 4 @ccC. point 0 nongenic -1058 upstream {F59A6.1} 1203 CB6890_redo II 5028913 1 C T 19 1.00 63 62 2 4 6 @tTTT.. point 0 nongenic 1055 into {F59A6.1} 1204 CB6890_redo II 5029075 1 G A 255 1.00 63 62 0 35 35 @AaaaaAaAAAaAAaaAaAAAaaaaAAaAAAcaAaA point 0 silent AAG->AAA[Lys->Lys] {F59A6.1} 1213 CB6890_redo II 5185654 1 G C 255 1.00 63 62 0 25 25 @CCcCccccCCCCCcccCcccCCCcc point 0 missense,SNP CCT->CGT[Pro->Arg],none {C27D6.4c},{haw25156,uCE2-1607} 1214 CB6890_redo II 5191923 1 T G 33 1.00 63 62 2 3 5 @,.ggG point 0 nongenic,nongenic -2389 upstream,-4369 upstream {C34F11.6},{C27D6.4b.1} 1219 CB6890_redo II 5226420 1 A G 15 1.00 63 62 2 4 6 @GGGG.. point 0 nongenic,nongenic -1067 upstream,-3638 upstream {C34F11.9a},{EGAP2.2} 1221 CB6890_redo II 5231216 1 T G 29 1.00 63 0 0 4 4 @gggg point 0 nongenic,nongenic -185 upstream,736 downstream {EGAP2.1},{EGAP2.2} 1222 CB6890_redo II 5231227 1 T G 187 1.00 63 62 0 8 8 @gggggggg point 0 nongenic,nongenic -174 upstream,747 downstream {EGAP2.1},{EGAP2.2} 1223 CB6890_redo II 5231250 1 A C 255 1.00 63 62 0 21 21 @ccccccccCCCCCcCCCCCCC point 0 nongenic,nongenic -151 upstream,770 downstream {EGAP2.1},{EGAP2.2} 1230 CB6890_redo II 5322089 1 T A 152 1.00 63 62 0 6 6 @aAAAAA point 0 nongenic -890 upstream {F08B1.1a.3,F08B1.1c.1} 1231 CB6890_redo II 5488572 1 C T 255 1.00 63 62 0 35 35 @TTTTtTTTTTTtTtTtTtTttTtttTTtTtTTTTT point 0 nongenic,nongenic -6562 upstream,422 into {F12A10.5},{F12A10.4} 1241 CB6890_redo II 5565063 1 A G 12 1.00 63 2 0 4 4 @gggg point 0 nongenic -991 upstream {C17C3.2} 1246 CB6890_redo II 5635095 1 C G 255 1.00 63 62 0 34 34 @GgGGGGgGGgggGGGGgGGGggGggGGGGGgGGg point 0 missense,SNP GAA->CAA[Glu->Gln],none {F59E12.8},{haw25459} 1247 CB6890_redo II 5647429 1 C T 255 1.00 63 62 0 28 28 @ttTTtttTTTtTTtTtTtTTTTTTTTTt point 0 silent,SNP AAG->AAA[Lys->Lys],none {F59E12.10},{haw25466} 1248 CB6890_redo II 5661840 1 A C 9 1.00 63 4 1 3 4 @,ccc point 0 nongenic,nongenic,nongenic,nongenic -3540 upstream,318 downstream,680 into,702 into {C25H3.15},{C25H3.6c},{C25H3.6b},{C25H3.6a} 1249 CB6890_redo II 5661841 1 C A 15 1.00 63 4 0 6 6 @GaaaAA point 0 nongenic,nongenic,nongenic,nongenic -3539 upstream,319 downstream,681 into,703 into {C25H3.15},{C25H3.6c},{C25H3.6b},{C25H3.6a} 1254 CB6890_redo II 5723522 1 G T 255 1.00 63 62 1 22 23 @,ttTTTTttTTttTtTTTtTTTT point 0 nongenic,nongenic 1178 into,1791 into {C18A3.6b.1},{C18A3.6a,C18A3.6b.2} 1255 CB6890_redo II 5775940 1 C T 41 1.00 63 62 3 6 9 @TtttTt,.. point 0 nongenic -6975 upstream {K05F1.6a} 1258 CB6890_redo II 5846225 1 G T 182 1.00 63 62 1 8 9 @.tTTTtTtt point 0 nongenic,nongenic -376 upstream,-715 upstream {H41C03.3.1},{ZK1248.17} 6363 CB6890_redo II 5861709 0 X X -1000 -999.99 -1000 -1000 5 -1 4 @...,,AAaa indel 0 nongenic,nongenic -2453 upstream,-3317 upstream {F55C12.7.1,F55C12.7.2,F55C12.7.3},{F55C12.4} 1262 CB6890_redo II 5863711 1 G A 101 1.00 63 0 0 5 5 @AaAAa point 0 nongenic,nongenic -450 upstream,-5319 upstream {F55C12.7.1,F55C12.7.2,F55C12.7.3},{F55C12.4} 1263 CB6890_redo II 5892961 1 G A 255 1.00 63 62 0 34 34 @AaaaAAAAaaAAAaAAAaaaaAaAaaaAAAaaAa point 0 nongenic,nongenic,nongenic -3174 upstream,326 downstream,767 downstream {F59G1.4},{F55C12.1d.1},{F55C12.1a.1,F55C12.1a.2,F55C12.1a.3,F55C12.1b,F55C12.1c,F55C12.1d.2} 1266 CB6890_redo II 5938979 1 T A 9 1.00 63 42 2 2 4 @.,Aa point 0 five_prime_UTR,premature_stop none,TTA->TAA[Leu->stop] {F28B12.2e.1,F28B12.2e.2,F28B12.2e.3},{F28B12.2a,F28B12.2b,F28B12.2c,F28B12.2d,F28B12.2f.1,F28B12.2f.2} 1268 CB6890_redo II 5941664 1 T G 4 1.00 63 32 2 2 4 @,.gG point 0 nongenic,nongenic,nongenic -1287 upstream,766 into,892 downstream {F28B12.1a},{F28B12.1b},{F28B12.2a} 1269 CB6890_redo II 5960458 1 C T 255 1.00 63 62 0 38 38 @TtTTTTtTTTttttTtTtTttTTttTTTTTttTTTTTt point 0 SNP none {haw25654} 6365 CB6890_redo II 5974545 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @,.,tt indel 0 inframe none {B0034.5} 1271 CB6890_redo II 5983703 1 T A 8 1.00 63 62 5 6 11 @.,..,aAAAaa point 0 nongenic,nongenic -4795 upstream,-8774 upstream {ZK75.2},{B0034.5} 1272 CB6890_redo II 5983705 1 C T 69 1.00 63 8 4 8 12 @,..,tTTTttTt point 0 nongenic,nongenic -4793 upstream,-8776 upstream {ZK75.2},{B0034.5} 1273 CB6890_redo II 5986530 1 G A 255 1.00 63 62 0 40 40 @AAaaAAAaAAAaAaaAaaaAaaAAAaaaaaAAAaaAAAaA point 0 nongenic,nongenic -11601 upstream,-1968 upstream {B0034.5},{ZK75.2} 1275 CB6890_redo II 6068938 1 A T 3 3.62 0 18 14 27 41 @.,..,,TTT,T.TTttTtTTTtT.TTTtTTTT.TTtT,... point 0 nongenic -1840 upstream {H12I13.2} 1281 CB6890_redo II 6147998 1 G A 255 1.00 63 62 0 32 32 @aAAaaaAaAaaaaaaaaaAAaaaAaAaaAaAa point 0 nongenic,nongenic,nongenic 8809 into,909 into,9123 into {F57F10.1b},{F57F10.1a},{F57F10.1c} 1286 CB6890_redo II 6206072 1 C A 120 1.00 63 50 0 5 5 @Aaaag point 0 nongenic 2070 into {C30B5.5} 1287 CB6890_redo II 6208447 1 A C 17 1.00 63 2 1 6 7 @CcCCCC, point 0 nongenic -305 upstream {C30B5.5} 1290 CB6890_redo II 6451387 1 A T 255 1.00 63 62 0 35 35 @ttTttttTtttTttTttttTttttTTttTTTTttt point 0 SNP none {haw25895} 1292 CB6890_redo II 6527423 1 G A 255 1.00 63 62 0 27 27 @AAAAAaAAaaAAaaAaaAAAaaAAaAA point 0 silent,SNP ATC->ATT[Ile->Ile],none {C56E6.4},{haw25905} 1293 CB6890_redo II 6527424 1 A T 255 1.00 63 62 0 27 27 @TTTTtTTttTTttTttTTTttTTtTTT point 0 missense,SNP ATC->AAC[Ile->Asn],none {C56E6.4},{haw25906} 1294 CB6890_redo II 6533053 1 C T 43 1.00 63 36 2 4 6 @..TTtt point 0 nongenic,nongenic -1492 upstream,926 into {C56E6.5},{C56E6.1} 1295 CB6890_redo II 6533054 1 T C 37 1.00 63 42 2 4 6 @..CCcc point 0 nongenic,nongenic -1493 upstream,927 into {C56E6.5},{C56E6.1} 6374 CB6890_redo II 6539462 1 X X -1000 -999.99 -1000 -1000 4 -3 1 @,,,, indel -1 SNP none {snp_C56E6[1]} 1297 CB6890_redo II 6547250 1 C G 5 1.00 63 52 2 2 4 @gg.. point 0 nongenic,nongenic,nongenic -2950 upstream,-7675 upstream,452 into {C56E6.6},{F18C5.2},{F18C5.3} 1298 CB6890_redo II 6559524 1 T C 15 1.00 63 62 2 4 6 @CCCc., point 0 three_prime_UTR none {F18C5.10.1} 1301 CB6890_redo II 6620907 1 C G 115 1.00 63 62 1 6 7 @GGGGGg. point 0 nongenic,nongenic,nongenic,nongenic -11601 upstream,-1229 upstream,1193 into,964 into {C56C10.12},{F54H5.3},{F54H5.4b},{F54H5.4a} 1302 CB6890_redo II 6620908 1 G C 99 1.00 63 62 1 5 6 @CCCCc. point 0 nongenic,nongenic,nongenic,nongenic -11602 upstream,-1228 upstream,1192 into,963 into {C56C10.12},{F54H5.3},{F54H5.4b},{F54H5.4a} 1303 CB6890_redo II 6630609 1 T C 255 1.00 63 62 11 35 46 @Cccc.c.C.c.c.ccc.CcC..CcCc.c.cccCcCcccCcCccc.C point 0 nongenic,nongenic -492 upstream,-536 upstream {T19D12.4a},{T19D12.4b} 1305 CB6890_redo II 6657793 1 A G 179 1.00 63 62 0 6 6 @GgGGgG point 0 nongenic,nongenic,nongenic -2427 upstream,-3461 upstream,1021 into {T19D12.3},{T19D12.9},{T19D12.10} 1306 CB6890_redo II 6657794 1 G A 189 1.00 63 62 0 8 8 @AaAAaAAa point 0 nongenic,nongenic,nongenic -2426 upstream,-3462 upstream,1020 into {T19D12.3},{T19D12.9},{T19D12.10} 1310 CB6890_redo II 6718342 1 T C 23 1.00 63 0 0 4 4 @CCCC point 0 nongenic,nongenic,nongenic -135 upstream,-161 upstream,636 downstream {T14B4.4a.1},{T14B4.4a.2,T14B4.4b.2},{T14B4.5} 1315 CB6890_redo II 6721755 1 A C 117 7.00 63 62 0 4 4 @cCcc point 0 ncRNA none {T14B4.t1} 1316 CB6890_redo II 6721756 1 G C 115 7.00 63 62 0 4 4 @cCcc point 0 ncRNA none {T14B4.t1} 6380 CB6890_redo II 6724147 0 X X -1000 -999.99 -1000 -1000 8 -4 4 @..,,,,,,CCC indel 0 nongenic -2583 upstream {T14B4.8} 1317 CB6890_redo II 6724148 1 A C 3 1.00 63 30 5 6 11 @CCCCCC,,,,. point 0 nongenic -2584 upstream {T14B4.8} 1319 CB6890_redo II 6727389 1 T G 24 1.00 63 62 4 5 9 @,,,.GGGGg point 0 nongenic -5825 upstream {T14B4.8} 162999 CB6890_redo II 6730771 67 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2886 to 2953 bp into {T14B4.9} 1324 CB6890_redo II 6734010 1 C T 142 1.00 63 38 0 4 4 @TTtT point 0 nongenic,nongenic -286 upstream,-836 upstream {T14B4.9},{T14B4.3} 1327 CB6890_redo II 6736304 1 C G 255 1.00 63 62 0 29 29 @gGgggGGgGGGgGgGggGGggGgGGggGG point 0 missense,SNP TCC->TGC[Ser->Cys],none {T14B4.2},{haw25953} 1328 CB6890_redo II 6736306 1 T C 255 1.00 63 62 0 27 27 @ccCCcCCCcCcCccCCccCcCCccCCC point 0 missense,SNP TTC->CTC[Phe->Leu],none {T14B4.2},{haw25954} 1336 CB6890_redo II 6745223 1 A C 16 1.00 63 38 1 3 4 @,cCc point 0 nongenic,nongenic -552 upstream,196 downstream {F41G3.17},{F41G3.16} 1337 CB6890_redo II 6745251 1 A C 255 1.00 63 62 0 17 17 @cCcCCCCccccCCCcCc point 0 nongenic,nongenic -580 upstream,168 downstream {F41G3.17},{F41G3.16} 6384 CB6890_redo II 6750712 0 X X -1000 -999.99 -1000 -1000 4 0 4 @,..,Gg indel 0 inframe none {F41G3.20} 1339 CB6890_redo II 6755908 1 A T 255 1.00 63 62 0 45 45 @tTttTtTTttTTTTTTtTtTtTTTTTtTTTttTtttTTTTTtTTT point 0 SNP none {haw25965} 1340 CB6890_redo II 6759798 1 A T 94 1.00 63 62 5 9 14 @,..,,TTtttTTTt point 0 nongenic,nongenic,nongenic 568 into,824 downstream,936 downstream {F41G3.2},{F41G3.12},{F41G3.3} 1345 CB6890_redo II 6759922 1 C T 113 1.00 63 46 0 6 6 @ttTTTT point 0 silent ACC->ACT[Thr->Thr] {F41G3.2} 1346 CB6890_redo II 6762603 1 C T 255 1.00 63 62 0 53 53 @ttttTTTTttttTtTTTTTTtTttTtTTtttTTTTtTttTtttttTtTTTttt point 0 SNP none {haw25977} 1351 CB6890_redo II 6766065 1 C T 255 1.00 63 62 0 56 56 @tTtTTtTtTtTtttttttTtTtTTtTTttTtTTTTttTTttTTtTTTttTTTTTtT point 0 SNP none {haw25988} 1352 CB6890_redo II 6766211 1 C T 255 1.00 63 62 0 33 33 @TTtttTttttTtTTtTTTttTTTTTTttTtTTt point 0 SNP none {haw25989} 1353 CB6890_redo II 6808829 1 A G 255 1.00 63 62 0 23 23 @gGggGgggggggggGggGgGgGG point 0 SNP none {haw26048} 1354 CB6890_redo II 6878056 1 C T 255 1.00 63 62 0 21 21 @TTTTTTTTtTttTTTtTTttT point 0 SNP none {haw26160} 1355 CB6890_redo II 6896314 1 T A 255 1.00 63 62 0 34 34 @AAaaaaAaaaaaaaaaAaAAaaaaaaaaaaaAAa point 0 SNP none {haw26186} 1356 CB6890_redo II 6908081 1 C T 4 6.56 63 48 2 5 7 @,,TtTtT point 0 nongenic,nongenic,nongenic -1927 upstream,-386 upstream,-851 upstream {B0252.2},{B0252.3b},{B0252.3a.1} 1357 CB6890_redo II 6908985 1 C T 255 1.00 63 62 0 34 34 @TTtTTtTTTTTttTTTttTTTTTTtTttttTTTT point 0 SNP none {haw26205} 1359 CB6890_redo II 6942566 1 C T 85 1.00 63 0 0 4 4 @tTtT point 0 nongenic,nongenic,nongenic,nongenic -1675 upstream,-3759 upstream,4319 into,5258 into {F22D3.2c},{F22D3.5},{F22D3.2b},{F22D3.2a} 1360 CB6890_redo II 6944910 1 G A 60 1.00 63 62 2 4 6 @AAaA,. point 0 nongenic,nongenic,nongenic,nongenic -6103 upstream,1975 into,2914 into,669 into {F22D3.5},{F22D3.2b},{F22D3.2a},{F22D3.2c} 1361 CB6890_redo II 6999734 1 C A 255 1.00 63 62 0 35 35 @aAaAAAaaAaaAaAAAaAaaaAAAaAAaaAaAAaA point 0 SNP none {haw26262} 1363 CB6890_redo II 7003347 1 T A 255 1.00 63 62 0 28 28 @aaAaaAaaAaAAaAAaAAAAAAaaaaAA point 0 missense GTA->GAA[Val->Glu] {C52E12.2a,C52E12.2b} 1364 CB6890_redo II 7026080 1 T A 255 1.00 63 62 0 35 35 @AAAaaAAaAaAAAAaAAAaAaAAAaAAaAAaaAAA point 0 nongenic,nongenic,nongenic -12152 upstream,340 into,342 into {ZK1127.7},{C52E12.1.2},{C52E12.1.1} 1365 CB6890_redo II 7028429 1 T A 31 1.00 63 0 0 4 4 @aaaa point 0 nongenic,nongenic,nongenic -9803 upstream,1395 into,1663 into {ZK1127.7},{C52E12.1.2},{C52E12.1.1} 1368 CB6890_redo II 7028439 1 T A 121 1.00 63 0 0 4 4 @AaAa point 0 nongenic,nongenic,nongenic -9793 upstream,1385 into,1653 into {ZK1127.7},{C52E12.1.2},{C52E12.1.1} 1374 CB6890_redo II 7141342 1 T A 56 1.00 63 54 1 5 6 @,aaaaa point 0 nongenic -3216 upstream {T07F8.2} 1375 CB6890_redo II 7166857 1 G A 255 1.00 63 62 0 52 52 @AAAaaaAAAAaaaAAAAAAaAAAAAaaaaAAAAAaAaAAaaaAAAAaaAAaA point 0 nongenic,nongenic,nongenic -1079 upstream,603 downstream,758 downstream {C27H5.4b},{C27H5.7b.1},{C27H5.5} 1376 CB6890_redo II 7343869 1 C G 26 1.00 63 28 1 3 4 @,ggg point 0 nongenic,nongenic,nongenic,nongenic,nongenic -13728 upstream,-2578 upstream,4667 into,4694 into,4701 into {F21D12.5},{F21D12.1c.1},{F21D12.1a},{F21D12.1d},{F21D12.1c.2,F21D12.1e} 1385 CB6890_redo II 7397590 1 C G 70 1.00 63 16 1 4 5 @GGGG. point 0 nongenic,nongenic,nongenic -1360 upstream,301 downstream,843 downstream {C07D10.1},{C07D10.2b.1},{C07D10.2a,C07D10.2b.2} 1386 CB6890_redo II 7400007 1 G A 255 1.00 63 62 0 29 29 @AAAaAAAAAAAaAAAAaAaaaAAaaaAAa point 0 nongenic,nongenic 472 into,655 downstream {C07D10.1},{C07D10.4} 1387 CB6890_redo II 7403160 1 C A 54 1.00 63 62 0 7 7 @AaAaAAa point 0 nongenic,nongenic -514 upstream,-5270 upstream {C07D10.4},{K02A2.2} 1388 CB6890_redo II 7433507 1 T G 28 1.00 63 62 4 5 9 @.,,,GGggG point 0 nongenic,nongenic -1688 upstream,-2177 upstream {K02A2.1},{K02A2.3} 1389 CB6890_redo II 7433508 1 G C 99 1.00 63 28 3 6 9 @,,,CCccCc point 0 nongenic,nongenic -1687 upstream,-2178 upstream {K02A2.1},{K02A2.3} 1392 CB6890_redo II 7447196 1 T G 122 2.00 50 62 15 26 41 @.GGg.GgggGG.gg.g,.g...g.Gg.Gg,Gggg.gggg.. point 0 missense GTG->GGG[Val->Gly] {Y9D1A.1} 1398 CB6890_redo II 7486765 1 G C 19 7.19 63 20 2 3 5 @Ccc., point 0 nongenic -3720 upstream {D1022.8} 1399 CB6890_redo II 7486766 1 C G 21 7.19 63 18 2 3 5 @Ggg., point 0 nongenic -3721 upstream {D1022.8} 1400 CB6890_redo II 7507136 1 G A 255 1.00 63 62 0 33 33 @AaaaAAAAAAaaAaAAaAAAAAaaAaAaaaAAA point 0 nongenic,nongenic 153 downstream,605 downstream {C28F5.2},{C28F5.1} 1401 CB6890_redo II 7514029 1 G A 255 1.00 63 62 0 29 29 @AAaaaAAaaAAaAaaaAaAAAAAAaaaaa point 0 nongenic -120 upstream {C28F5.2} 1403 CB6890_redo II 7584472 1 C A 42 4.56 63 20 6 6 12 @..A....aAaAA point 0 nongenic -983 upstream {F35D2.4} 1404 CB6890_redo II 7618212 1 G A 98 1.00 63 62 0 8 8 @AAaaaaaa point 0 SNP,three_prime_UTR none,none {haw26758},{R07G3.8} 1405 CB6890_redo II 7618213 1 T G 106 1.00 63 62 0 8 8 @GGgggggg point 0 three_prime_UTR none {R07G3.8} 1406 CB6890_redo II 7618214 1 G T 74 1.00 63 62 1 7 8 @Tttttt.T point 0 three_prime_UTR none {R07G3.8} 1407 CB6890_redo II 7634324 1 G T 30 1.00 63 28 2 2 4 @.,TT point 0 nongenic,nongenic,nongenic -161 upstream,6330 into,7142 into {R153.1a},{R153.1b,R153.1c,R153.1d,R153.1e},{R153.1g} 1408 CB6890_redo II 7634326 1 T G 29 1.00 63 30 2 2 4 @.,GG point 0 nongenic,nongenic,nongenic -163 upstream,6332 into,7144 into {R153.1a},{R153.1b,R153.1c,R153.1d,R153.1e},{R153.1g} 1410 CB6890_redo II 7642038 1 C G 102 1.00 63 40 0 4 4 @gGGG point 0 five_prime_UTR none {R153.1d,R153.1f} 1414 CB6890_redo II 7642132 1 T G 45 1.00 63 62 1 5 6 @.ggggG point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -38 upstream,-41 upstream,7755 into,7785 into,9034 into,950 into {R153.1f},{R153.1d},{R153.1b},{R153.1e},{R153.1g},{R153.1c} 1415 CB6890_redo II 7676553 1 A G 119 1.00 63 62 2 9 11 @GggGgGGg.t, point 0 nongenic,nongenic,nongenic -5337 upstream,4617 into,4619 into {F18A1.2.2},{F18A1.3a.2,F18A1.3b,F18A1.3c,F18A1.3d,F18A1.3e},{F18A1.3a.1} 1416 CB6890_redo II 7676557 1 G A 53 1.00 63 62 4 4 8 @aAAa..,, point 0 nongenic,nongenic,nongenic -5333 upstream,4621 into,4623 into {F18A1.2.2},{F18A1.3a.2,F18A1.3b,F18A1.3c,F18A1.3d,F18A1.3e},{F18A1.3a.1} 1427 CB6890_redo II 7743764 1 C A 139 1.00 63 10 0 4 4 @aAaa point 0 nongenic,nongenic,nongenic 1443 into,8594 into,8881 into {B0228.4e},{B0228.4a},{B0228.4c} 163000 CB6890_redo II 7743769 97 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered non-exonic, 1447 to 1544 bp into,non-exonic, 18942 to 19039 bp into {B0228.4e},{B0228.4a,B0228.4c} 1430 CB6890_redo II 7744682 1 T A 255 1.00 63 62 0 34 34 @AaaAaaAaaaAAAAAAAaaaAAAaAaaaaAAaAa point 0 missense ATA->AAA[Ile->Lys] {B0228.4c,B0228.4e} 1431 CB6890_redo II 7745442 1 G A 255 1.00 63 62 0 23 23 @AAaaaaaaAaaAAaAaAaAAaaa point 0 silent GAG->GAA[Glu->Glu] {B0228.4c,B0228.4e} 1435 CB6890_redo II 7840046 1 A T 255 1.00 63 62 0 30 30 @TTTTTtTTTTTtTTttttTTttttTttTtt point 0 nongenic,nongenic -2300 upstream,-4975 upstream {T09A5.2a,T09A5.2b,T09A5.2c},{T09A5.1a,T09A5.1b} 6413 CB6890_redo II 7871212 0 X X -1000 -999.99 -1000 -1000 1 0 1 @.aa indel 0 inframe none {T01H3.3.1,T01H3.3.2} 1440 CB6890_redo II 7883746 1 C G 100 2.00 35 62 0 7 7 @GGGGGgG point 0 nongenic -9413 upstream {ZK675.1.1,ZK675.1.2} 1441 CB6890_redo II 7913323 1 C A 255 1.00 63 62 0 37 37 @AaAaAAAAAaAAAaAAAAaAAAaAAAaAAAAAAAaaa point 0 SNP none {haw26997} 1443 CB6890_redo II 7960769 1 C G 255 1.00 63 62 0 39 39 @GgGggGGgggggGGGGgGggGGGgggGgGGggggGgggg point 0 SNP none {haw27047} 1444 CB6890_redo II 8033056 1 C G 67 1.00 63 8 1 6 7 @GggGgg, point 0 nongenic -416 upstream {C08B11.4} 1447 CB6890_redo II 8049769 1 G C 41 1.00 63 0 0 4 4 @Cccc point 0 nongenic,nongenic,nongenic -3297 upstream,725 into,733 downstream {T05H10.4a,T05H10.4b.2},{T05H10.3},{T05H10.2} 1450 CB6890_redo II 8227927 1 G C 255 1.00 63 62 0 28 28 @CCCCccCcCCCCCccCCCCCcCCCCcCC point 0 missense CGC->CCC[Arg->Pro] {M110.5a.1,M110.5a.2,M110.5b,M110.5c,M110.5d} 1451 CB6890_redo II 8227928 1 C G 255 1.00 63 62 0 29 29 @GGGGggGgGGGGGggGGGGGgGGGGgGGG point 0 silent CGC->CGG[Arg->Arg] {M110.5a.1,M110.5a.2,M110.5b,M110.5c,M110.5d} 1454 CB6890_redo II 8262986 1 T C 164 10.00 63 62 1 12 13 @C.CCCCCCCCCCC point 0 nongenic,nongenic -1606 upstream,-3923 upstream {K01C8.1.1},{F35C11.6} 1460 CB6890_redo II 8349791 1 G A 255 1.00 63 62 0 31 31 @AAaaAaAAAAaaaAaaAAaAaaAAaaaAaaa point 0 nongenic,nongenic,nongenic 675 downstream,691 into,830 downstream {C26D10.6a.1},{C26D10.5a,C26D10.5b},{C26D10.6a.2} 1462 CB6890_redo II 8459512 1 G C 3 1.00 63 2 0 4 4 @ACCc point 0 nongenic,nongenic,nongenic -3111 upstream,-5266 upstream,1764 into {F22B5.6},{F22B5.9},{F22B5.7} 1463 CB6890_redo II 8462083 1 G A 255 1.00 63 62 0 31 31 @AAAAAaaAAaaAaaaAAaaAaAAaAAAAAAa point 0 missense GGA->AGA[Gly->Arg] {F22B5.7} 1464 CB6890_redo II 8559694 1 G A 255 1.00 63 62 0 30 30 @aAaaAaaaAaaAAAAaaAaaAaAaaAAaAa point 0 three_prime_UTR none {F54C9.1.1,F54C9.1.2,F54C9.1.3} 1465 CB6890_redo II 8584093 1 C T 255 1.00 63 62 0 35 35 @TttttttTTTtttTtTTTtTTTTtttTttttttTt point 0 missense,SNP GGA->GAA[Gly->Glu],none {F54C9.11},{haw27317} 1466 CB6890_redo II 8605395 1 G A 255 1.00 63 62 0 24 24 @AaaAaAaAaAaAaaaAAaaaAAAA point 0 missense GAA->AAA[Glu->Lys] {F28C6.6.1,F28C6.6.2} 1467 CB6890_redo II 8689938 1 G T 40 1.00 63 28 1 3 4 @ttT, point 0 nongenic,nongenic -1915 upstream,-5061 upstream {C34C6.3},{C34C6.2c} 1468 CB6890_redo II 8715377 1 C T 255 1.00 63 62 0 34 34 @TtttTTTtTTTtTttTtttttttTttTtTTTTtT point 0 SNP none {haw27384} 1469 CB6890_redo II 8743835 1 G A 255 1.00 63 62 1 21 22 @AaAAAAaaAAAaAaaAAaA,aa point 0 nongenic,nongenic,nongenic,nongenic -160 upstream,-171 upstream,-6349 upstream,181 into {K08F8.1b.1},{K08F8.1a,K08F8.1b.3,K08F8.1c.1,K08F8.1c.2,K08F8.1c.4,K08F8.1d.1,K08F8.1d.2,K08F8.1e.1,K08F8.1e.2,K08F8.1e.4},{T01B7.8},{K08F8.1b.2} 1471 CB6890_redo II 8748249 1 G C 14 1.00 63 12 5 5 10 @...,,CCCcc point 0 SNP none {snp_K08F8[1]} 1473 CB6890_redo II 8802488 1 T G 255 1.00 63 62 0 32 32 @GGgGgggGGggGggGggggGgggGggGggGgg point 0 silent,SNP TCT->TCG[Ser->Ser],none {F07H5.8},{haw27428} 1476 CB6890_redo II 8819693 1 T A 5 1.00 63 18 3 4 7 @,,.aAaa point 0 nongenic,nongenic -1381 upstream,387 downstream {F46C5.10},{F46C5.1} 1477 CB6890_redo II 8819694 1 A T 18 1.00 63 4 3 4 7 @,,.tTtt point 0 nongenic,nongenic -1382 upstream,386 downstream {F46C5.10},{F46C5.1} 6421 CB6890_redo II 8894561 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,,Cc indel 0 nongenic -2201 upstream {B0457.1a,B0457.1b} 1480 CB6890_redo II 8894955 1 C T 255 1.00 63 62 0 29 29 @TtTTtttTtTTTttTtttTtttTttTTTt point 0 SNP none {haw27502} 6422 CB6890_redo II 8896592 1 X X -1000 -999.99 -1000 -1000 6 -3 3 @,..... indel -1 SNP none {uCE2-1805} 1481 CB6890_redo II 8907371 1 C T 255 1.00 63 62 0 23 23 @TTttTttTTTtTTTTtTttTttt point 0 SNP none {haw27506} 1484 CB6890_redo II 8916760 1 C T 197 1.00 63 62 0 6 6 @TTtTTt point 0 nongenic,nongenic -4809 upstream,-5611 upstream {B0457.4},{B0457.6} 1486 CB6890_redo II 9029285 1 G A 255 1.00 63 62 0 33 33 @AAaAaaAaaaaaaAAAaAaaAAAAAaaAAAAAa point 0 nongenic -106 upstream {F37B12.1} 1488 CB6890_redo II 9090949 1 A G 88 1.00 63 62 1 5 6 @.GGgGg point 0 nongenic 175 downstream {C07H4.1} 1489 CB6890_redo II 9090950 1 G T 95 1.00 63 62 1 6 7 @.TTtTtt point 0 nongenic 174 downstream {C07H4.1} 1490 CB6890_redo II 9092377 1 C T 255 1.00 63 62 0 40 40 @TttTtTttTtTTtttttTTTtTTTTTTTTTTTTTTTTTTt point 0 SNP none {haw27664} 1492 CB6890_redo II 9299860 1 G C 23 1.00 63 62 5 6 11 @,,,.,CCCCCc point 0 nongenic,nongenic -4183 upstream,4018 into {C01G6.9},{C01G6.8a,C01G6.8b,C01G6.8c} 1493 CB6890_redo II 9322175 1 T C 136 1.00 63 62 5 12 17 @CCcCCCCCcccc.,,.. point 0 nongenic,nongenic,nongenic -1708 upstream,184 into,372 downstream {D2013.10},{D2013.1},{D2013.2} 1494 CB6890_redo II 9322176 1 C A 117 1.00 63 62 6 11 17 @AaAAAAAaaaa.,,.., point 0 nongenic,nongenic,nongenic -1707 upstream,185 into,373 downstream {D2013.10},{D2013.1},{D2013.2} 1495 CB6890_redo II 9331348 1 C T 255 1.00 63 62 0 34 34 @ttttTtttTtttTTttttTTtttttTttTtTttt point 0 SNP none {haw27818} 1498 CB6890_redo II 9413505 1 G A 255 1.00 63 62 1 31 32 @aaaAAaAAaaaAAa.AAAAAAAaaAaaaAAaa point 0 nongenic,nongenic 564 into,986 downstream {M176.1},{M176.2.1} 6428 CB6890_redo II 9419090 0 X X -1000 -999.99 -1000 -1000 4 0 4 @..,.ccc indel 0 nongenic,nongenic,nongenic -1313 upstream,853 downstream,885 downstream {M176.4},{M176.3.1},{M176.3.2} 1500 CB6890_redo II 9427750 1 T C 59 1.00 63 10 1 3 4 @cCC. point 0 nongenic -91 upstream {M176.5} 1501 CB6890_redo II 9427753 1 C T 11 1.00 63 40 2 2 4 @TT.. point 0 nongenic -94 upstream {M176.5} 1502 CB6890_redo II 9428872 1 G A 255 1.00 63 62 0 23 23 @AaAAaaAaAaaAaaAAAAAAAaA point 0 SNP none {haw27856} 1503 CB6890_redo II 9436563 1 C T 255 1.00 63 62 0 43 43 @TtTtttTtttTtttTTTtTttTTttTtTTTTTTTtTtttttTt point 0 SNP none {haw27860} 1504 CB6890_redo II 9493721 1 C T 8 1.00 63 32 2 2 4 @,,tT point 0 nongenic -5539 upstream {T19H5.4a} 1508 CB6890_redo II 9693726 1 C G 3 1.00 63 6 1 4 5 @.gggg point 0 nongenic -1861 upstream {ZK1320.10.1} 1509 CB6890_redo II 9748512 1 G A 255 1.00 63 62 1 20 21 @Aa.AaaAaaAaAAAaAAAAaa point 0 missense ATG->ATA[Met->Ile] {Y53C12B.3a,Y53C12B.3b} 1510 CB6890_redo II 9770349 1 G A 255 1.00 63 62 1 33 34 @aA,aAAAAaAaAaaAAaAAaaaAAaAaaaAAaAa point 0 nongenic,nongenic,nongenic -573 upstream,-578 upstream,342 downstream {ZK1321.3.1},{ZK1321.3.2},{ZK1321.4} 1511 CB6890_redo II 9937117 1 T A 31 1.00 63 52 2 5 7 @AAAA,c, point 0 nongenic,nongenic,nongenic -298 upstream,-300 upstream,911 downstream {C05C10.3.1},{C05C10.3.2},{C05C10.7} 1514 CB6890_redo II 10009009 1 G A 255 1.38 63 62 0 24 24 @AAAAAAaaAaaAaaaAAAaaaAAA point 0 nongenic,nongenic,nongenic,nongenic 296 into,522 downstream,672 downstream,996 downstream {ZK892.5},{F52H3.7b.1,F52H3.7b.2},{F52H3.7b.3},{ZK892.4} 1515 CB6890_redo II 10019098 1 A C 255 3.62 63 62 0 27 27 @ccCcCcCccCCccccCccCccCcCcCC point 0 nongenic -3114 upstream {F52H3.7a} 1516 CB6890_redo II 10019211 1 C G 3 1.00 63 6 1 4 5 @GGGG, point 0 nongenic -3227 upstream {F52H3.7a} 1522 CB6890_redo II 10020667 1 A G 3 5.81 63 0 1 5 6 @GGGG.c point 0 nongenic -4683 upstream {F52H3.7a} 1529 CB6890_redo II 10189305 1 G A 255 1.00 63 62 0 38 38 @AAaaaaaaAAaAaaaaaaAaAAaAAAaaaAAaaAAAAa point 0 silent TGC->TGT[Cys->Cys] {R05H5.2} 1532 CB6890_redo II 10340121 1 T G 255 1.00 63 62 0 31 31 @GgggGgggGgGGGGGGGGgGgggGgGgGGgg point 0 missense CAT->CCT[His->Pro] {C07E3.2.1,C07E3.2.2} 1534 CB6890_redo II 10427277 1 C T 64 1.00 63 34 1 3 4 @,Ttt point 0 nongenic,nongenic -5328 upstream,-8788 upstream {E04D5.2},{E04D5.3} 1537 CB6890_redo II 10436909 1 A C 255 1.00 63 62 0 51 51 @CccccCcCCCCCcCCcccCCcCccccCCccccCCCccCcCCcCccccCccc point 0 SNP none {haw28333,snp_E04D5[5]} 1538 CB6890_redo II 10437067 1 G A 255 1.00 63 62 0 35 35 @AaAaAAaaaaAAaAaAaAAaaaAaaAaaaaAAAaa point 0 SNP none {haw28334} 1539 CB6890_redo II 10473915 1 A G 255 1.00 63 62 0 34 34 @GGgGGGGggGGGGGGgGgggGgGGgGGgGggGGG point 0 SNP none {haw28363} 1540 CB6890_redo II 10620116 1 G A 255 1.00 63 62 0 38 38 @AAAAAaaAaAAAAaaaAAAAAaaaaAAAAaaAAAAAAa point 0 silent AAG->AAA[Lys->Lys] {C14A4.13} 1541 CB6890_redo II 10779219 1 G T 202 1.00 63 62 0 9 9 @ttttttTTt point 0 nongenic,nongenic,nongenic,nongenic -4234 upstream,-6153 upstream,355 into,898 into {C52A11.4d},{R06F6.1.1},{T19E10.1a},{T19E10.1b} 1542 CB6890_redo II 10779220 1 G A 198 1.00 63 62 0 9 9 @aaaaaaAAa point 0 nongenic,nongenic,nongenic,nongenic -4235 upstream,-6152 upstream,356 into,899 into {C52A11.4d},{R06F6.1.1},{T19E10.1a},{T19E10.1b} 1543 CB6890_redo II 10826673 1 A T 156 1.00 63 32 3 10 13 @..TTTTTttTTt. point 0 nongenic,nongenic,nongenic -2670 upstream,2456 into,960 downstream {R06F6.12},{M106.1},{VM106R.1} 1544 CB6890_redo II 10827063 1 C T 255 1.00 63 62 0 29 29 @TTttTTTtTtTtTTTTTTtTTTTTTTtTT point 0 SNP none {haw28664,snp_VM106R[1]} 1545 CB6890_redo II 10828430 1 C T 255 1.00 63 62 0 26 26 @TTtTTTTtttTtTTttTTttTtTTtT point 0 SNP none {haw28666} 1546 CB6890_redo II 10828577 1 G A 255 1.00 63 62 0 17 17 @aaAaAaAAaaAAAAAAa point 0 SNP none {haw28667} 1547 CB6890_redo II 10829219 1 G A 255 1.00 63 62 0 25 25 @aaaAAaAAaAAaAAAAaAaAaAAAa point 0 SNP none {haw28668} 1548 CB6890_redo II 10911807 1 G A 255 8.56 63 62 2 34 36 @aA.A.AaAaAaAAAAAAAaAAAAaaAAaaAAAaaAa point 0 nongenic -1565 upstream {F44F4.13} 1549 CB6890_redo II 10916042 1 G A 255 1.44 63 62 0 29 29 @AAAaaAaAaaAaAAAaAAaaAaaaaAaAa point 0 missense CGT->TGT[Arg->Cys] {F44F4.10} 1550 CB6890_redo II 11092046 1 T C 255 1.00 63 62 0 30 30 @CCCcCcCCCCCcCcCccccCCCCCCCcCcc point 0 nongenic,nongenic -2665 upstream,-626 upstream {F45E10.1a,F45E10.1b,F45E10.1c,F45E10.1d},{C09H10.1} 1552 CB6890_redo II 11167281 1 G T 40 1.00 63 62 3 5 8 @,,,tTttt point 0 nongenic -5025 upstream {K07C10.1} 1553 CB6890_redo II 11167283 1 T C 97 1.00 63 40 1 6 7 @,cCcccC point 0 nongenic -5027 upstream {K07C10.1} 1554 CB6890_redo II 11181038 1 T G 253 1.00 63 62 1 10 11 @,gggGGggGGG point 0 SNP none {snp_F37H8[3]} 6444 CB6890_redo II 11194996 1 X X -1000 -999.99 -1000 -1000 6 -3 3 @..,,,. indel -1 SNP none {uCE2-1963} 1563 CB6890_redo II 11202840 1 C G 68 1.00 63 4 2 4 6 @ggGG,. point 0 nongenic -899 upstream {T06D8.1a,T06D8.1b} 6446 CB6890_redo II 11207618 0 X X -1000 -999.99 -1000 -1000 2 -1 1 @.,aa indel 5 frameshift none {T06D8.1a,T06D8.1b} 1564 CB6890_redo II 11207620 1 A G 8 1.00 63 0 0 4 4 @TggG point 0 silent GAA->GAG[Glu->Glu] {T06D8.1a,T06D8.1b} 1580 CB6890_redo II 11611863 1 G T 51 1.00 63 56 2 5 7 @.,tTTtT point 0 nongenic,nongenic -136 upstream,416 downstream {F07A11.5},{F07A11.4} 1581 CB6890_redo II 11611864 1 A G 56 1.00 63 50 2 5 7 @.,gGGgG point 0 nongenic,nongenic -135 upstream,417 downstream {F07A11.5},{F07A11.4} 6450 CB6890_redo II 11611946 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @,.,,.,TtT indel 0 nongenic,nongenic -54 upstream,499 downstream {F07A11.5},{F07A11.4} 1585 CB6890_redo II 11723425 1 T G 3 1.00 63 4 3 7 10 @,,GGG,Ggcc point 0 nongenic -1815 upstream {F13D12.2} 1586 CB6890_redo II 11765649 1 C G 28 1.00 63 10 0 7 7 @ggggggg point 0 nongenic,nongenic -1038 upstream,-70 upstream {F44E5.2},{F44E5.3} 1587 CB6890_redo II 11794523 1 A C 255 1.00 63 62 0 21 21 @CccccCCCccccCcccCcCCc point 0 nongenic,nongenic -4429 upstream,2641 into {F43G6.11a,F43G6.11b},{F43G6.4} 1589 CB6890_redo II 11896727 1 C G 4 1.00 63 2 3 6 9 @GGG.G..gg point 0 nongenic,nongenic -2107 upstream,558 downstream {ZK930.2},{ZK930.3a} 1590 CB6890_redo II 11928146 1 A C 5 1.00 63 18 2 3 5 @,,ccc point 0 nongenic,nongenic,nongenic -20520 upstream,4995 into,7114 into {W03C9.8},{W03C9.4b},{W03C9.4a} 1607 CB6890_redo II 12115353 1 C T 255 1.00 63 62 0 27 27 @ttTTttttttTttttTttTTTTtTttT point 0 SNP none {haw30080} 163008 CB6890_redo II 12152308 96 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered codon 112 to codon 145 (5 % of 630 codons) {Y57A10A.4} 1610 CB6890_redo II 12152588 1 A G 148 1.00 63 62 0 6 6 @gggggg point 0 missense AAT->AGT[Asn->Ser] {Y57A10A.4} 163009 CB6890_redo II 12152606 1861 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered codon 197 to 295 bp downstream (69 % of 630 codons) {Y57A10A.4} 163010 CB6890_redo II 12154519 229 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered codon 31 to codon 90 (10 % of 572 codons) {Y57A10A.5} 163011 CB6890_redo II 12154844 59 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered codon 109 to codon 129 (3 % of 572 codons) {Y57A10A.5} 163012 CB6890_redo II 12155143 73 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered codon 194 to codon 219 (4 % of 572 codons) {Y57A10A.5} 163013 CB6890_redo II 12155384 135 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered codon 259 to codon 287 (5 % of 572 codons) {Y57A10A.5} 163014 CB6890_redo II 12155571 219 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered codon 301 to codon 375 (13 % of 572 codons) {Y57A10A.5} 163015 CB6890_redo II 12155842 1023 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered codon 391 to 377 bp downstream (32 % of 572 codons) {Y57A10A.5} 1622 CB6890_redo II 12157260 1 C T 136 1.00 63 62 0 5 5 @tTtTT point 0 nongenic,nongenic -2137 upstream,772 downstream {Y57A10A.7},{Y57A10A.5} 1625 CB6890_redo II 12170815 1 G A 255 1.00 63 62 0 32 32 @aAaaAAAaaAAaaaaaaAAaAAaAaAaAaAAa point 0 SNP none {haw30197} 1626 CB6890_redo II 12171257 1 C T 101 1.81 63 62 23 31 54 @.,,.tt.TtTt,Ttttt,t,.,T,,,,,tT,TTT,TtT,TtTttT.t,,T..TT point 0 nongenic,nongenic -1230 upstream,579 downstream {Y57A10A.11},{Y57A10A.8} 1627 CB6890_redo II 12171258 1 C T 84 1.56 63 62 23 32 55 @,,.tt.TtTt,Ttttt,t,.,T,,,,,tT,TTT,TtT,TtTttT.t,,T..TTT. point 0 SNP none {haw30199} 1628 CB6890_redo II 12174493 1 G A 255 1.00 63 62 0 26 26 @AAAAAaAaaAaaAAAaAaaaAAAaaA point 0 SNP none {haw30201} 1629 CB6890_redo II 12178809 1 C T 255 1.00 63 62 0 27 27 @TTtttTttttTTttttTtTtTTTtTTt point 0 SNP none {haw30206} 1630 CB6890_redo II 12184101 1 G A 255 1.00 63 62 0 41 41 @aaaAAAaaaAaaAAAAAAAaaaaaaaAAAAaaAAaAAAAAA point 0 nongenic,nongenic -1820 upstream,687 into {Y57A10A.14},{Y57A10A.13} 1631 CB6890_redo II 12189092 1 T A 255 1.00 63 62 0 52 52 @AaaAAAaaAAaaaaaaaaaaAaAAaaaaaaaaAaAaaAAAAAAAaaaAaAAa point 0 three_prime_UTR none {Y57A10A.14} 1632 CB6890_redo II 12193173 1 G A 255 1.00 63 62 0 28 28 @AaaaaaAaAAAaaaaAaaaAAAAAaAaa point 0 nongenic 3382 into {Y57A10A.15} 1633 CB6890_redo II 12230090 1 T G 41 1.31 63 20 4 5 9 @ggGGG..,. point 0 nongenic 1857 into {Y57A10A.20} 1634 CB6890_redo II 12230284 1 A G 4 1.00 63 62 2 3 5 @GGG,. point 0 nongenic 2051 into {Y57A10A.20} 1636 CB6890_redo II 12260333 1 C T 255 1.19 63 62 0 11 11 @tTTTTTtTTtT point 0 SNP none {haw30396} 1637 CB6890_redo II 12266285 1 G T 164 1.00 63 62 6 14 20 @..,.,,TttTTTtttTTttt point 0 SNP none {haw30403} 1638 CB6890_redo II 12272901 1 G A 99 1.00 63 62 3 8 11 @AAAAAAAa,,, point 0 nongenic 2059 into {Y57A10A.27} 1639 CB6890_redo II 12370055 1 C A 255 1.00 63 62 0 20 20 @aAaAaAAaAAaAAAAaaAAa point 0 SNP none {haw30684} 1640 CB6890_redo II 12387897 1 T A 255 1.00 63 62 0 31 31 @AAAAAAAaAaaaaaAaaAaAaaAaaaaAaAa point 0 SNP none {haw30711} 1644 CB6890_redo II 12531727 1 G A 255 1.00 63 62 0 26 26 @aAaaaAaAaAAAAaAaaAaaaAAAAa point 0 nongenic,nongenic -3947 upstream,555 into {F49C5.4},{F49C5.2} 1648 CB6890_redo II 12545249 1 G C 3 1.00 63 0 1 5 6 @.ctccc point 0 nongenic,nongenic -700 upstream,695 downstream {F49C5.9},{F49C5.5} 1649 CB6890_redo II 12545250 1 T C 15 1.00 63 0 0 7 7 @ccccccc point 0 nongenic,nongenic -701 upstream,694 downstream {F49C5.9},{F49C5.5} 1655 CB6890_redo II 12560340 1 A T 255 1.00 63 62 0 41 41 @TTtTtttTtTtTTTtTtTtTtTtTttTTtttTTttTTtttT point 0 nongenic,nongenic -166 upstream,-3757 upstream {F49C5.12},{F49C5.6} 1656 CB6890_redo II 12595553 1 C T 255 1.00 63 62 0 27 27 @tTTTTtTtTTTTtTTtttTttTTTTTt point 0 SNP none {haw31224} 1686 CB6890_redo II 12650528 1 T A 14 5.25 18 30 1 5 6 @AAAA.A point 0 nongenic -4135 upstream {Y38E10A.20} 1689 CB6890_redo II 12651849 1 G C 15 3.69 63 2 0 6 6 @CCCCCC point 0 nongenic -2814 upstream {Y38E10A.20} 1691 CB6890_redo II 12651854 1 G C 12 4.00 63 0 0 4 4 @CCCC point 0 nongenic -2809 upstream {Y38E10A.20} 1694 CB6890_redo II 12658929 1 C T 255 1.00 63 62 0 31 31 @ttTtTTTTttttTtTTTTttttTtTtttTTt point 0 SNP none {haw31398} 1695 CB6890_redo II 12659508 1 A G 255 1.00 63 62 0 33 33 @GGGGGGGgGGgGGggGGGggGgGgGgggGGggg point 0 nongenic,nongenic -9241 upstream,4241 into {Y38E10A.21},{Y38E10A.20} 1696 CB6890_redo II 12670938 1 A G 255 1.00 63 62 0 38 38 @gggGgggGggGgggGggGggGggGggGggGGGggGGgG point 0 SNP none {haw31411} 1697 CB6890_redo II 12675701 1 T A 99 1.00 63 62 1 6 7 @Aaaaaa. point 0 nongenic 399 into {Y38E10A.22} 1698 CB6890_redo II 12677412 1 T G 255 1.00 63 62 0 20 20 @ggGGgGGGGgggGgggGggG point 0 missense AAC->ACC[Asn->Thr] {Y38E10A.23} 1699 CB6890_redo II 12683679 1 A T 255 1.00 63 62 0 29 29 @TTTTTttTTttttttttTtTttTttttTT point 0 nongenic,nongenic -10640 upstream,2944 into {Y46G5A.1a,Y46G5A.1b},{Y46G5A.2} 1700 CB6890_redo II 12684543 1 G A 255 1.00 63 62 0 20 20 @aAAaaaaaaaaAAaaaaaaa point 0 SNP none {haw31456} 1701 CB6890_redo II 12684928 1 G A 203 1.00 63 62 0 10 10 @aAAAAAAAAA point 0 SNP none {haw31457} 1703 CB6890_redo II 12749851 1 T C 134 8.75 63 62 392 -137 255 @CCCCC..,,,,,A,,,,,,.C,.c,,,..C,C,,.CCCCC..CC,,CCC,.,,,,,.cCCC,,Ccc.c.c....,,CCC,,,,,,C,CC..c..CC,C, point 0 nongenic -11610 upstream {Y46G5A.5} 1704 CB6890_redo II 12764190 1 G C 255 1.00 63 62 0 35 35 @ccCcCCcCcCCCcccCccCCcccccCCCccccCcc point 0 SNP none {haw31561} 6461 CB6890_redo II 12764265 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @..,,..tT indel 0 nongenic -2862 downstream {Y46G5A.10} 1705 CB6890_redo II 12764266 1 A C 73 1.00 63 62 2 4 6 @CCcc., point 0 nongenic 2861 into {Y46G5A.10} 1706 CB6890_redo II 12769726 1 G C 95 4.50 63 0 0 4 4 @CcCc point 0 nongenic,nongenic,nongenic -1594 upstream,-5199 upstream,1076 into {Y46G5A.12.1},{Y46G5A.14},{Y46G5A.13} 1720 CB6890_redo II 12779060 1 G A 255 3.12 63 62 0 27 27 @aaAAaAAAaAAaAaaaAAAaaaAaAaa point 0 nongenic -2067 upstream {Y46G5A.34} 1721 CB6890_redo II 12780396 1 A G 3 5.56 30 4 3 6 9 @GGG.G.,gg point 0 nongenic -731 upstream {Y46G5A.34} 1722 CB6890_redo II 12784485 1 T C 255 1.00 63 62 0 24 24 @CCcCcCcCcCCCccccCcCccCCc point 0 SNP none {haw31598} 1729 CB6890_redo II 12795899 1 G C 12 1.00 63 62 1 5 6 @C.Cccc point 0 nongenic,nongenic,nongenic -7850 upstream,463 into,469 into {Y46G5A.35},{Y46G5A.17.2},{Y46G5A.17.1} 1731 CB6890_redo II 12803501 1 G A 102 1.12 63 62 3 8 11 @.A..AAAAAAA point 0 nongenic,nongenic,nongenic -1270 upstream,-7133 upstream,1671 into {Y46G5A.19a.2},{Y46G5A.17.1},{Y46G5A.18a,Y46G5A.18b} 1742 CB6890_redo II 12829859 1 C A 180 1.00 63 62 1 16 17 @AAAAAAAAA.aAAAAAa point 0 nongenic,nongenic -756 upstream,-986 upstream {Y46G5A.24},{Y46G5A.23} 1744 CB6890_redo II 12871417 1 C G 255 1.06 63 62 0 26 26 @ggGgGGggggGGGggGGGGgGGgGGg point 0 nongenic,nongenic,nongenic -5686 upstream,-9306 upstream,5056 into {Y46G5A.30},{F35C5.1},{Y46G5A.31} 1746 CB6890_redo II 12977483 1 G A 255 1.00 63 62 0 24 24 @AAAAaAAAAAAAaAAAAAAAAaAA point 0 nongenic,nongenic,nongenic -3016 upstream,-8358 upstream,583 into {Y38F1A.5.1},{Y38F1A.4},{Y38F1A.3} 1747 CB6890_redo II 12982873 1 A C 34 1.00 63 14 0 7 7 @CCccccc point 0 nongenic,nongenic -5258 upstream,2374 into {Y38F1A.5.2},{Y38F1A.5.1} 1749 CB6890_redo II 13062610 1 T A 255 1.00 63 62 0 34 34 @aaaaaaaaAaAAAaAaAAaAaaAAAaAaAAaAAa point 0 SNP none {haw31867} 1750 CB6890_redo II 13063714 1 A G 121 1.00 63 62 0 8 8 @GGGggggg point 0 SNP none {snp_F42G4[4]} 1751 CB6890_redo II 13090005 1 T A 255 1.00 63 62 0 24 24 @aAAaaaaAAaAaAaaAAAaAaAaA point 0 missense GAT->GAA[Asp->Glu] {Y81G3A.3} 1753 CB6890_redo II 13092162 1 G T 255 1.50 63 62 1 24 25 @ttTtTTTTtttTtttTTTTTttt.t point 0 SNP none {snp_Y81G3A[2]} 1754 CB6890_redo II 13092217 1 G A 255 1.00 63 62 0 31 31 @AaaAAaAaaAaAaaaAAAaaaaAAaaAAAAa point 0 SNP none {haw31901,snp_Y81G3A[3]} 1755 CB6890_redo II 13097749 1 C G 112 1.44 63 62 0 9 9 @GGGGGGGGG point 0 nongenic,nongenic,nongenic -1202 upstream,407 downstream,435 into {Y81G3A.5b},{F29C12.3},{Y81G3A.5a} 1757 CB6890_redo II 13239531 1 G C 255 1.00 63 62 0 29 29 @cCCCccCCCcCccCCccccCCcCccCcCc point 0 missense GAC->GAG[Asp->Glu] {F15D4.4} 1758 CB6890_redo II 13350116 1 C A 255 1.00 63 62 0 38 38 @AaAaAAaAAaAAAAaAAaAAaAAAAaAAaaAAAAaAAa point 0 SNP none {haw32310} 1759 CB6890_redo II 13378340 1 G A 255 1.06 63 62 0 16 16 @AAAAAAaAAAAAAAAA point 0 SNP none {haw32413} 1763 CB6890_redo II 13384334 1 T C 3 4.88 63 2 1 17 18 @GCGCC,CCGCCCggggcc point 0 nongenic,nongenic -5334 upstream,4337 into {Y48C3A.14},{Y48C3A.12} 1764 CB6890_redo II 13385420 1 G A 3 5.88 63 0 3 4 7 @,AAA,A. point 0 nongenic,nongenic -4248 upstream,3251 into {Y48C3A.14},{Y48C3A.12} 1767 CB6890_redo II 13408374 1 C A 255 1.00 63 62 0 14 14 @AaAaAaaAaaAaaA point 0 nongenic,nongenic,nongenic,nongenic -4178 upstream,1162 into,2021 into,2307 into {Y48C3A.18a},{Y48C3A.17b},{Y48C3A.17c},{Y48C3A.17a,Y48C3A.17d} 1769 CB6890_redo II 13415893 1 T C 3 1.00 63 62 5 5 10 @CC,CCC..., point 0 nongenic,nongenic,nongenic -8520 upstream,957 into,960 into {Y48E1C.2},{Y48E1C.1a,Y48E1C.1c},{Y48E1C.1b} 1770 CB6890_redo II 13434751 1 G T 220 5.56 63 62 0 11 11 @TTtTTttttTt point 0 nongenic,nongenic 937 into,948 into {Y48E1C.4a},{Y48E1C.4b} 1771 CB6890_redo II 13434786 1 G T 137 8.12 63 62 1 8 9 @tt,tttttt point 0 nongenic,nongenic 972 into,983 into {Y48E1C.4a},{Y48E1C.4b} 1772 CB6890_redo II 13440583 1 G T 255 1.00 63 62 0 26 26 @ttTtTtTttTtTTTtTttTtTtttTt point 0 missense,SNP ACG->AAG[Thr->Lys],none {Y48E1C.3},{haw32539} 1773 CB6890_redo II 13452555 1 A G 255 1.00 63 62 0 24 24 @GGGggGGgGgGGggGggGggGggg point 0 nongenic,nongenic -5051 upstream,3796 into {E01G4.1},{E01G4.4} 1774 CB6890_redo II 13485389 1 T C 255 1.00 63 62 0 21 21 @CCCcCCCCCCCCcCCcccccC point 0 silent TGT->TGC[Cys->Cys] {E01G4.6} 1775 CB6890_redo II 13528270 1 A G 255 1.00 63 62 0 27 27 @gGgGGgggGGGGGGgGgGgGggGGGGg point 0 nongenic,nongenic,nongenic 2857 into,2859 into,689 into {Y48E1B.14a.2},{Y48E1B.14a.1},{Y48E1B.14b} 1776 CB6890_redo II 13551694 1 C G 255 1.19 63 62 0 28 28 @ggGGGGGGGGGgggggGGGGGGGGGGGG point 0 nongenic,nongenic,nongenic,nongenic -4156 upstream,1639 into,3852 into,4036 into {Y48E1B.1},{Y48E1B.3b.2},{Y48E1B.3a,Y48E1B.3b.1,Y48E1B.3d},{Y48E1B.3c} 1777 CB6890_redo II 13578367 1 A G 113 1.00 63 62 0 6 6 @GGGGGG point 0 nongenic,nongenic,nongenic -3397 upstream,-7267 upstream,2535 into {Y48E1B.5},{Y48E1B.8},{Y48E1B.7} 1778 CB6890_redo II 13579405 1 T A 207 1.12 63 62 0 10 10 @AAAAAAAAAA point 0 nongenic,nongenic,nongenic -4435 upstream,-6229 upstream,3573 into {Y48E1B.5},{Y48E1B.8},{Y48E1B.7} 1779 CB6890_redo II 13579440 1 T A 216 1.31 63 62 0 12 12 @AAAAAAAAAAAA point 0 nongenic,nongenic,nongenic -4470 upstream,-6194 upstream,3608 into {Y48E1B.5},{Y48E1B.8},{Y48E1B.7} 1781 CB6890_redo II 13719112 1 T G 16 2.19 63 2 2 4 6 @,GGGG, point 0 nongenic,nongenic,nongenic -3331 upstream,-3759 upstream,1020 into {Y54G9A.4},{Y54G9A.5},{Y54G9A.10} 1785 CB6890_redo II 13722005 1 C A 255 1.06 63 62 0 31 31 @aaaaAAAAAAaAaaAAAAAAAaAAaaAaAaA point 0 SNP none {haw33062} 1786 CB6890_redo II 13738653 1 T A 61 1.25 63 62 4 6 10 @....AAAAAA point 0 nongenic -3007 upstream {R06B9.6} 1790 CB6890_redo II 13801366 1 C A 255 1.00 63 62 0 33 33 @AaAaaAAaaaaAAaAaaAAAAAAAAAAAaAaaa point 0 SNP none {haw33213} 1791 CB6890_redo II 13883906 1 G T 8 1.00 63 6 2 3 5 @.,TtT point 0 nongenic,nongenic,nongenic -4656 upstream,1296 into,1297 into {Y51H1A.6a},{Y51H1A.5.2},{Y51H1A.5.1} 1793 CB6890_redo II 13905903 1 T G 20 1.00 63 62 3 5 8 @GGGGG... point 0 nongenic,nongenic -2925 upstream,-3896 upstream {W02B8.2},{W02B8.1} 1797 CB6890_redo II 13985375 1 G T 52 7.56 50 20 0 13 13 @TTTTTTtTTTtTT point 0 nongenic -819 upstream {Y39G8B.4} 1801 CB6890_redo II 14019756 1 C G 3 1.00 61 0 1 4 5 @g.ggg point 0 nongenic,nongenic -2887 upstream,1094 into {F01D5.9},{F01D5.10} 1807 CB6890_redo II 14171676 1 C T 255 1.00 63 62 0 40 40 @TTTtttTtTtTtTtTTTTttttttTtTTtttTTttTtttt point 0 SNP none {haw33776} 1808 CB6890_redo II 14211019 1 C G 255 1.00 63 62 0 39 39 @ggTTgGgGgGgggGggGGgGggggggGGGggGggGGGgG point 0 SNP none {haw33827} 1811 CB6890_redo II 14260657 1 A C 123 2.56 63 62 0 12 12 @CCCCCCCCCCCC point 0 nongenic,nongenic -15895 upstream,4405 into {Y54G11A.3},{Y54G11A.1} 1812 CB6890_redo II 14261823 1 G C 169 1.00 63 62 0 8 8 @CCccCcCc point 0 SNP none {haw33932} 163018 CB6890_redo II 14267559 61 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1436 to 1497 bp into {Y54G11A.1} 1815 CB6890_redo II 14276713 1 T C 255 1.00 63 62 0 37 37 @CCccccccccCCccCcccCcccCcCccCcccccccCC point 0 silent,SNP TTG->CTG[Leu->Leu],none {Y54G11A.3},{haw33969} 1816 CB6890_redo II 14279456 1 C A 42 6.62 32 42 0 8 8 @aaaaaaaa point 0 nongenic,nongenic -10400 upstream,2904 into {Y54G11A.1},{Y54G11A.3} 1817 CB6890_redo II 14311576 1 T C 255 1.00 63 62 0 19 19 @CCCCCcCCcccCcCccccc point 0 nongenic,nongenic -6483 upstream,-894 upstream {Y54G11A.14},{Y54G11A.13} 1820 CB6890_redo II 14337929 1 G T 8 3.81 12 0 2 5 7 @,.Tttct point 0 SNP none {haw34038} 1832 CB6890_redo II 14406898 1 T C 255 1.00 63 62 0 31 31 @CccCCccCCCCcCCCCCcccCccCccCCCCc point 0 silent,SNP TTT->TTC[Phe->Phe],none {F26H11.2c,F26H11.2d.1,F26H11.2d.2,F26H11.2e,F26H11.2f,F26H11.2g},{snp_F26H11[1]} 1836 CB6890_redo II 14481995 1 C G 3 6.50 63 0 1 5 6 @gggag. point 0 nongenic -2465 upstream {C13B4.1a,C13B4.1b.1,C13B4.1b.2} 1841 CB6890_redo II 14839972 1 G C 255 1.00 63 62 0 33 33 @CCcccCcCcCcCCCCCCCCccCcCCCcCcCccC point 0 nongenic,nongenic -21528 upstream,-3152 upstream {W01D2.2a,W01D2.2b},{R05H10.6} 6474 CB6890_redo II 14855870 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,,.tt indel 1 nongenic,nongenic -1291 upstream,-439 downstream {R05H10.2},{R05H10.7} 1842 CB6890_redo II 14855871 1 A T 4 1.00 63 2 0 5 5 @GTttt point 0 nongenic,nongenic -1289 upstream,441 into {R05H10.2},{R05H10.7} 1843 CB6890_redo II 14872831 1 C A 255 1.00 63 62 0 41 41 @AAaaaAaaAaAAaAaAaaaaaaaaaaaaAaAAaaAAaAAaA point 0 nongenic 2986 into {R05H10.3a,R05H10.3b} 1847 CB6890_redo II 14993339 1 T C 65 2.50 63 62 33 42 75 @.,....,C,.,C...CCC,C.CCCCC,ccc.c.ccCcCCc....c.CcCCccc.,C.c..cc.CC.Cc.CCcc., point 0 nongenic 33 downstream {Y53F4B.7} 1848 CB6890_redo II 14993590 1 G T 119 9.69 63 62 22 32 54 @t..t,tt,.tttttt,,t,t.ttttttttttt.tT,ttt.T,,,tt,,,,,t,, point 0 nongenic 284 downstream {Y53F4B.7} 1853 CB6890_redo II 15043614 1 C T 209 1.50 40 62 0 33 33 @tTTtTtTTtTTTTTTttttttTttttttttttT point 0 ncRNA none {Y53F4B.45} 1854 CB6890_redo II 15043625 1 C G 254 1.50 40 62 0 29 29 @GgGGGGGGggggggGggggggggggGGgg point 0 ncRNA none {Y53F4B.45} 1855 CB6890_redo II 15073258 1 T A 255 9.81 63 62 0 25 25 @AAAAAAaaaAaAAaAaaAaAaAAaa point 0 nongenic,nongenic -1689 upstream,-3916 upstream {Y53F4B.18},{Y53F4B.19} 1861 CB6890_redo II 15137492 1 G C 3 8.88 63 0 3 4 7 @,,CCcc, point 0 nongenic,nongenic -3568 upstream,2098 into {Y53F4B.24},{Y53F4B.25} 1869 CB6890_redo III 53307 1 G C 12 1.00 63 22 0 4 4 @CCCC point 0 nongenic -4393 upstream {W05G11.2} 1870 CB6890_redo III 59296 1 A G 4 9.88 63 0 1 6 7 @G.gggcg point 0 nongenic,nongenic 614 downstream,74 downstream {W05G11.2},{W05G11.5} 1878 CB6890_redo III 85353 1 A C 3 5.25 35 16 2 8 10 @ccc.ccc.cc point 0 nongenic,nongenic -15536 upstream,1031 into {F54C4.2},{F54C4.3} 1882 CB6890_redo III 118298 1 T G 255 1.00 63 62 0 32 32 @gGGGgGggGGGggggggggggGGGgGggGggg point 0 silent GTT->GTG[Val->Val] {C29F9.5} 1883 CB6890_redo III 124105 1 G T 47 1.00 63 62 13 19 32 @,t,,,.t,T.t.TTTtTTtTtt.TT.,,,tTT point 0 missense,SNP AGG->ATG[Arg->Met],none {C29F9.4},{pas12618} 1885 CB6890_redo III 187827 1 C T 78 1.00 63 62 12 17 29 @tttttT...TTT,...,..,ttttTT,Tt point 0 missense GGA->AGA[Gly->Arg] {F40G9.11} 1886 CB6890_redo III 277155 1 G A 10 1.06 63 62 8 13 21 @A...aAAAaa.,.aaa,.aaA point 0 nongenic,nongenic -6960 upstream,5727 into {Y50D7A.9},{Y50D7A.2} 1897 CB6890_redo III 393066 1 A G 3 9.25 0 2 8 11 19 @G..,.G,GGG,GGG.gg,g point 0 nongenic -10496 upstream {K10F12.7} 1899 CB6890_redo III 414450 1 T A 152 5.06 63 62 22 29 51 @aaaaaa.,a,aaaaa,aaaaA,,.aaa.aa,aaaa.,,a,a,a,,,,,,,, point 0 nongenic,nongenic,nongenic -14848 upstream,3934 into,4288 into {Y55B1BR.3},{Y55B1BM.1c},{Y55B1BM.1a,Y55B1BM.1b} 1906 CB6890_redo III 467851 1 G A 118 1.00 63 62 7 16 23 @.....aaAAA.AaAAaAAAAa.a point 0 nongenic,nongenic,nongenic -4133 upstream,-4448 upstream,2987 into {Y55B1BR.6},{F10C5.2.1},{Y55B1BR.4} 1907 CB6890_redo III 467994 1 G A 5 1.00 63 62 9 11 20 @,,aa,aa,aa,a,,aaa,,a point 0 nongenic,nongenic,nongenic -4276 upstream,-4305 upstream,3130 into {Y55B1BR.6},{F10C5.2.1},{Y55B1BR.4} 1909 CB6890_redo III 498685 1 G A 6 1.75 63 10 0 5 5 @caaaA point 0 nongenic 3905 into {F30H5.1} 1926 CB6890_redo III 543651 1 T G 18 1.00 63 26 3 5 8 @,,,gGGGG point 0 nongenic,nongenic,nongenic -13863 upstream,-16737 upstream,1588 into {B0353.1b},{T22F7.4},{T22F7.1} 1927 CB6890_redo III 543652 1 G C 26 1.00 63 18 3 5 8 @,,,cCCCC point 0 nongenic,nongenic,nongenic -13862 upstream,-16738 upstream,1589 into {B0353.1b},{T22F7.4},{T22F7.1} 1928 CB6890_redo III 628763 1 A C 34 1.19 63 26 0 5 5 @tCCCC point 0 nongenic,nongenic -951 upstream,592 into {T19C3.5},{T19C3.6} 1930 CB6890_redo III 672115 1 C G 35 1.00 63 30 2 5 7 @GggGG., point 0 nongenic,nongenic -3686 upstream,-4000 upstream {W02B3.3},{W02B3.2} 1931 CB6890_redo III 672116 1 A C 30 1.00 63 34 2 5 7 @CccCC., point 0 nongenic,nongenic -3687 upstream,-3999 upstream {W02B3.3},{W02B3.2} 1932 CB6890_redo III 691185 1 C T 255 1.00 63 62 0 26 26 @tTTtTTTtTTTtTttTTtTtTTTTTT point 0 silent,SNP GAG->GAA[Glu->Glu],none {W02B3.7},{haw37341} 1933 CB6890_redo III 702652 1 T C 3 5.31 0 20 12 17 29 @C,,CCCCC.,c.c,CCCC,ccCC.,,C., point 0 nongenic,nongenic,nongenic -3675 upstream,-6201 upstream,13183 into {C24A1.2a},{C24A1.3b},{C24A1.2b} 1934 CB6890_redo III 752175 1 G T 255 1.00 63 62 0 20 20 @tttTtTTTttTTTttTtTtt point 0 nongenic,nongenic -5489 upstream,246 into {T17H7.4a.1,T17H7.4a.2,T17H7.4b.1,T17H7.4b.2,T17H7.4c.1,T17H7.4c.2,T17H7.4g.2},{T17H7.4a.3,T17H7.4b.3,T17H7.4c.3,T17H7.4j} 1939 CB6890_redo III 758902 1 C T 114 1.00 63 0 0 5 5 @TTTTt point 0 nongenic,nongenic -2582 upstream,-832 upstream {F42G9.4},{T17H7.7} 1943 CB6890_redo III 805757 1 G A 53 1.00 63 42 1 6 7 @aaAaaa, point 0 nongenic,nongenic,nongenic -6063 upstream,3598 into,3677 into {B0412.2},{B0412.3.2},{B0412.3.1} 1944 CB6890_redo III 805758 1 A G 43 1.00 63 52 1 4 5 @Gggg, point 0 nongenic,nongenic,nongenic -6062 upstream,3597 into,3676 into {B0412.2},{B0412.3.2},{B0412.3.1} 1945 CB6890_redo III 819729 1 T G 7 1.00 63 26 1 3 4 @G,Gg point 0 nongenic,nongenic,nongenic -3484 upstream,1429 into,1994 into {K02F3.5},{B0412.1b},{B0412.1a} 1946 CB6890_redo III 825062 1 A G 28 1.00 63 62 19 24 43 @GG.,..g..,G,..Gg,Gggg,gGgggggg..g,GGg,,,G,g point 0 nongenic 1340 into {K02F3.5} 1950 CB6890_redo III 932355 1 C G 15 6.19 63 8 1 4 5 @.gggg point 0 nongenic -6053 upstream {F23H11.8a,F23H11.8b.1,F23H11.8b.2,F23H11.8b.3} 1951 CB6890_redo III 932357 1 C G 59 1.00 63 14 0 5 5 @ggggg point 0 nongenic -6055 upstream {F23H11.8a,F23H11.8b.1,F23H11.8b.2,F23H11.8b.3} 1961 CB6890_redo III 1122191 1 T A 12 1.00 63 32 1 3 4 @,AaA point 0 nongenic,nongenic,nongenic -5828 upstream,5679 into,5741 into {F58B6.1},{Y71D11A.3b},{Y71D11A.3a} 1981 CB6890_redo III 1248564 1 T C 3 1.88 63 2 3 4 7 @,cc.c.c point 0 nongenic,nongenic -918 upstream,580 into {Y119D3B.6},{Y119D3B.22} 2004 CB6890_redo III 1323866 1 G A 255 1.00 63 62 0 32 32 @AaaAaAaaAaaaAaaaaaaaaAAaaAAAaaAA point 0 nongenic,nongenic -178 upstream,-4767 upstream {Y82E9BL.10},{Y82E9BL.18} 2018 CB6890_redo III 1629052 1 C T 255 1.00 63 62 1 41 42 @tTTtTTTtTttttTtTTTtTTt.TttTttttTTTtTTttTtt point 0 SNP none {haw39277} 2027 CB6890_redo III 1636696 1 G A 255 1.00 63 62 0 39 39 @aaaaaaaaaaAaAAaaaaAaAaaaaaaaaAaaAaaaAAA point 0 SNP none {haw39295} 2028 CB6890_redo III 1636742 1 C A 255 1.00 63 62 0 31 31 @AAaAaAAAAAaAaAAAaAaAAaAAAAAaaAA point 0 SNP none {haw39297} 2029 CB6890_redo III 1636775 1 G A 255 1.00 63 62 0 24 24 @AAaAAAAAaaAAAAAAAAAAaAaa point 0 SNP none {haw39298} 2030 CB6890_redo III 1636782 1 G T 255 1.00 63 62 0 24 24 @TTTTTttTTTTTTTTTTtTttTtt point 0 SNP none {haw39299} 2038 CB6890_redo III 1863224 1 G T 255 1.94 63 62 0 19 19 @ttttttTtttttttTtttT point 0 SNP none {haw39736} 2043 CB6890_redo III 1961520 1 T G 35 1.00 63 62 4 6 10 @GGGggg,,,, point 0 nongenic,nongenic,nongenic -3669 upstream,414 into,415 into {R155.1b.2},{R155.1a.2,R155.1b.1,R155.1b.3},{R155.1a.1} 2045 CB6890_redo III 2097794 1 A G 3 1.31 63 20 2 6 8 @G,Gc,ccc point 0 nongenic,nongenic,nongenic -4488 upstream,1829 into,2078 into {Y48G9A.8},{Y48G9A.9b},{Y48G9A.9a} 2046 CB6890_redo III 2100236 1 T C 9 1.00 63 36 3 8 11 @GGC,,ccc.cc point 0 nongenic,nongenic,nongenic -2046 upstream,364 downstream,613 downstream {Y48G9A.8},{Y48G9A.9a},{Y48G9A.9b} 2056 CB6890_redo III 2282476 1 G T 11 1.69 63 62 13 13 26 @TtTttTTtT,,,,t,,..T.t...t, point 0 nongenic,nongenic -8964 upstream,5211 into {Y54F10BM.15},{Y54F10BM.3} 2058 CB6890_redo III 2327186 1 G A 112 1.00 63 62 0 4 4 @AaaA point 0 nongenic,nongenic 279 into,297 downstream {Y54F10BM.12},{Y54F10BM.2} 2071 CB6890_redo III 2365479 1 T C 112 5.50 63 62 1 4 5 @CCC.C point 0 SNP none {haw40568} 2072 CB6890_redo III 2365480 1 A G 113 5.50 63 62 1 4 5 @GGG.G point 0 nongenic 787 into {H04J21.2} 2073 CB6890_redo III 2405323 1 C T 255 1.00 63 62 0 26 26 @TtTtTTttTtttTtttTtTtTTTTTT point 0 SNP none {haw40696} 2078 CB6890_redo III 2425054 1 G C 10 1.19 63 48 2 3 5 @,,ccc point 0 silent CCG->CCC[Pro->Pro] {W04B5.2} 2090 CB6890_redo III 2562158 1 C T 64 1.00 63 62 9 13 22 @TTTT,.Tttt,,,,t..ttt.t point 0 nongenic,nongenic 119 into,812 downstream {Y54F10AM.1},{Y54F10AM.11} 163021 CB6890_redo III 2564745 130 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2705 to 2835 bp into {Y54F10AM.1} 2092 CB6890_redo III 2565617 1 G A 255 1.12 63 62 0 41 41 @aaAaaaaaaaaaaaaaAaaaaAaAaaAAaaaAaaAaaAaAa point 0 nongenic,nongenic -1638 upstream,556 into {Y54F10AM.11},{Y54F10AM.1} 6492 CB6890_redo III 2653087 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @...tt indel 0 nongenic -4986 upstream {H19M22.2a,H19M22.2b,H19M22.2d} 2097 CB6890_redo III 2653185 1 A C 195 1.00 63 62 0 9 9 @CccCccCcc point 0 nongenic -4887 upstream {H19M22.2a,H19M22.2b,H19M22.2d} 2098 CB6890_redo III 2653187 1 A C 97 1.00 63 46 2 5 7 @cCccC.. point 0 nongenic -4885 upstream {H19M22.2a,H19M22.2b,H19M22.2d} 2105 CB6890_redo III 2701751 1 A T 18 1.00 63 62 12 12 24 @.TTtT..tTTt,,...tT..TT.. point 0 SNP none {haw41217} 2112 CB6890_redo III 2761515 1 G C 3 1.00 63 0 1 4 5 @.cccc point 0 nongenic -708 upstream {Y71H2AM.16} 2114 CB6890_redo III 2809673 1 A G 247 1.00 63 62 0 9 9 @ggggggGGG point 0 nongenic 1320 into {Y71H2AM.3} 2115 CB6890_redo III 2814037 1 C T 49 1.00 63 62 9 11 20 @,t,t.,.,tTttTt.T,TT. point 0 missense TGT->TAT[Cys->Tyr] {Y71H2AM.23.1,Y71H2AM.23.2} 2116 CB6890_redo III 2822658 1 G C 242 3.25 63 62 0 20 20 @CCCCCCCCCCCCCCCCCCCc point 0 nongenic,nongenic,nongenic -4401 upstream,-7696 upstream,2000 into {Y71H2AM.1.1,Y71H2AM.1.2},{Y71H2AM.23.1},{Y71H2AM.2} 2119 CB6890_redo III 2950964 1 A T 26 1.00 63 2 2 3 5 @ttt,, point 0 nongenic,nongenic,nongenic,nongenic -6929 upstream,-7115 upstream,1354 into,3884 into {R10F2.6},{H05C05.1b},{H05C05.1a.1},{H05C05.1a.2} 2120 CB6890_redo III 2950966 1 T G 3 1.00 63 26 3 3 6 @ggg,,, point 0 nongenic,nongenic,nongenic,nongenic -6931 upstream,-7113 upstream,1356 into,3886 into {R10F2.6},{H05C05.1b},{H05C05.1a.1},{H05C05.1a.2} 2121 CB6890_redo III 2980599 1 A T 31 1.00 63 62 10 13 23 @.,t..,TtT.,T,.ttTTtt,TT point 0 SNP none {haw41691} 2122 CB6890_redo III 2983606 1 C T 43 1.00 63 62 12 14 26 @,Ttt.t.TT,T.TTtT,.t..T,..t point 0 nongenic,nongenic,nongenic -2389 upstream,-7830 upstream,1203 into {Y55D5A.1b.1},{Y55D5A.3},{Y55D5A.1a,Y55D5A.1b.2} 2126 CB6890_redo III 3162633 1 A G 255 1.00 63 62 0 33 33 @GgGGgGGGGgGgggGGGggGGgGGGgggGgggg point 0 nongenic -3640 upstream {R148.5a,R148.5b} 2127 CB6890_redo III 3162638 1 A G 255 1.00 63 62 0 36 36 @GgGGgGGGGgGgggGGGggGGgGGGgggGggggggg point 0 nongenic -3635 upstream {R148.5a,R148.5b} 6495 CB6890_redo III 3217308 0 X X -1000 -999.99 -1000 -1000 6 -5 1 @,.,.,cc. indel 4 nongenic,nongenic,nongenic,nongenic -1832 downstream,-1834 downstream,-8422 upstream,-9033 upstream {H09G03.2b.2},{H09G03.2b.1},{H09G03.2a,H09G03.2c},{H09G03.1} 2134 CB6890_redo III 3230685 1 T C 227 1.44 63 62 0 28 28 @ccccccCCcCcccCCcccccCCcCcccc point 0 nongenic,nongenic -2405 upstream,43 downstream {Y53G8AL.1},{H09G03.1} 2135 CB6890_redo III 3252687 1 G T 255 1.00 63 62 0 33 33 @ttTtTTttTtttTTtTTtTTtTTtTtTtCtTTt point 0 nongenic,nongenic -2701 upstream,446 into {Y53G8AL.4},{Y53G8AL.3} 2136 CB6890_redo III 3254400 1 G C 214 1.06 63 62 1 13 14 @ccCCCCCCCcCCc. point 0 nongenic,nongenic -1267 upstream,386 into {Y53G8AL.3},{Y53G8AM.4} 2137 CB6890_redo III 3255111 1 C A 255 1.00 63 62 0 20 20 @aAaAaAAaaAAaAAAAAAAa point 0 SNP none {haw42163} 2138 CB6890_redo III 3255125 1 C T 255 1.00 63 62 0 22 22 @ttTTtTTTTTTTtTTTTTTTtT point 0 SNP none {haw42164} 2139 CB6890_redo III 3255131 1 G T 255 1.00 63 62 0 19 19 @TTTTTTtTTTTTTTtTtTt point 0 nongenic,nongenic -1998 upstream,478 into {Y53G8AL.3},{Y53G8AM.4} 2140 CB6890_redo III 3271710 1 A G 255 1.00 63 62 1 14 15 @GgGGgGg.GgGGggg point 0 SNP none {haw42190} 2141 CB6890_redo III 3271738 1 T A 255 1.00 63 62 0 21 21 @AaaAaAAaaaaaaaAAaAaAa point 0 SNP none {haw42191} 2144 CB6890_redo III 3281311 1 T C 231 1.00 63 62 3 13 16 @cCccccCcCCCCC.., point 0 nongenic,nongenic -2623 upstream,-985 upstream {Y53G8AM.8.1,Y53G8AM.8.2},{Y53G8AR.7a} 2148 CB6890_redo III 3343175 1 A C 7 1.00 63 62 1 3 4 @.ccc point 0 nongenic -1689 upstream {F45H7.2a,F45H7.2b} 2150 CB6890_redo III 3347670 1 A G 135 1.00 63 62 1 7 8 @GGgGgGG. point 0 nongenic,nongenic -13450 upstream,2806 into {F45H7.2c},{F45H7.2a,F45H7.2b} 2151 CB6890_redo III 3347671 1 G A 64 1.00 63 62 2 5 7 @AaAa,A. point 0 nongenic,nongenic -13449 upstream,2807 into {F45H7.2c},{F45H7.2a,F45H7.2b} 2154 CB6890_redo III 3366747 1 T G 79 1.00 63 62 1 3 4 @,GGg point 0 five_prime_UTR none {F45H7.4.1,F45H7.4.2} 2155 CB6890_redo III 3373714 1 G A 255 1.00 63 62 0 35 35 @AAAAaaaAAAAAaaaAaAAAaAAAaAaaAAaAAAa point 0 SNP none {haw42340} 2163 CB6890_redo III 3385599 1 T C 7 3.19 33 34 1 5 6 @CCCCC, point 0 nongenic,nongenic -15400 upstream,2224 into {F45H7.4.1},{F45H7.6} 2173 CB6890_redo III 3385874 1 G C 3 8.00 0 0 1 3 4 @,Ccc point 0 nongenic,nongenic -15675 upstream,1949 into {F45H7.4.1},{F45H7.6} 2176 CB6890_redo III 3387032 1 T C 132 1.75 63 52 0 10 10 @ccCCCcCccc point 0 missense AAC->AGC[Asn->Ser] {C56G7.2} 6503 CB6890_redo III 3430900 0 X X -1000 -999.99 -1000 -1000 8 -4 4 @..,,..,.CCcc indel 0 nongenic -439 downstream {K01A11.1} 6504 CB6890_redo III 3436724 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @....,,ggG indel 0 nongenic -5385 upstream {K01A11.1} 2182 CB6890_redo III 3442155 1 G A 255 1.00 63 62 0 29 29 @aaaaaaaAaaAAAaaAAaAaAaAaAaAAA point 0 missense CCA->TCA[Pro->Ser] {K01A11.4} 2186 CB6890_redo III 3445528 1 C A 30 8.50 34 0 0 4 4 @Aaaa point 0 nongenic -1331 upstream {K01A11.4} 2188 CB6890_redo III 3463329 1 C G 255 1.06 63 62 0 26 26 @GgGGggGGggGGggGGGgggggGGGg point 0 SNP none {haw42422} 2189 CB6890_redo III 3466299 1 G A 77 1.00 63 44 2 4 6 @aaaa.. point 0 nongenic 1349 into {C34C12.3} 2190 CB6890_redo III 3467137 1 T C 255 1.00 63 62 0 19 19 @CCCCcCccccCcccCCcCC point 0 SNP,three_prime_UTR none,none {haw42435},{C34C12.3} 2191 CB6890_redo III 3467466 1 C T 255 1.00 63 62 0 21 21 @TTTtTTTtTTtttTtTTtTTT point 0 SNP,three_prime_UTR none,none {haw42438},{C34C12.3} 2195 CB6890_redo III 3468663 1 A C 255 1.00 63 62 0 26 26 @ccccccccccccccCcccccccCcCc point 0 nongenic,nongenic,nongenic -3324 upstream,1013 into,972 into {C34C12.5.1,C34C12.5.2},{C34C12.4.1},{C34C12.4.2} 2198 CB6890_redo III 3511693 1 G T 14 1.00 63 0 0 5 5 @TTAtt point 0 nongenic,nongenic,nongenic 653 into,736 downstream,736 into {M01F1.5.2},{M01F1.6},{M01F1.5.1} 2199 CB6890_redo III 3511694 1 C G 13 1.00 63 0 1 4 5 @GA,gg point 0 nongenic,nongenic,nongenic 654 into,737 downstream,737 into {M01F1.5.2},{M01F1.6},{M01F1.5.1} 2201 CB6890_redo III 3517342 1 C T 229 9.88 63 62 0 20 20 @TTTtttTtTTTtTtTTtttT point 0 nongenic,nongenic -595 upstream,2250 into {M01F1.5.2},{M01F1.5.1} 2202 CB6890_redo III 3517362 1 T G 110 8.50 63 62 0 6 6 @GGgggG point 0 nongenic,nongenic -615 upstream,2230 into {M01F1.5.2},{M01F1.5.1} 2203 CB6890_redo III 3517366 1 T C 129 5.19 63 62 0 5 5 @cccCc point 0 nongenic,nongenic -619 upstream,2226 into {M01F1.5.2},{M01F1.5.1} 2204 CB6890_redo III 3517372 1 A G 194 4.81 63 62 0 11 11 @GgGgggggggg point 0 nongenic,nongenic -625 upstream,2220 into {M01F1.5.2},{M01F1.5.1} 2205 CB6890_redo III 3517380 1 A G 204 4.31 63 62 0 14 14 @gGgggggggggGGg point 0 nongenic,nongenic -633 upstream,2212 into {M01F1.5.2},{M01F1.5.1} 2206 CB6890_redo III 3582503 1 G A 255 1.00 63 62 0 26 26 @AAAaAaaaAAAAaaaaaAAAAaaaAa point 0 nongenic,nongenic -8214 upstream,-825 upstream {C48D5.2a},{C48D5.3} 2207 CB6890_redo III 3599953 1 T C 47 1.00 63 10 1 6 7 @C,ccccc point 0 nongenic,nongenic,nongenic,nongenic -18275 upstream,4749 into,835 into,9236 into {C48D5.3},{C48D5.2c},{C48D5.2b},{C48D5.2a} 2208 CB6890_redo III 3606223 1 A T 255 1.00 63 62 0 36 36 @TttTtTTTTtTtTTtTtttTTTTtTTTtTTTtTTtt point 0 nongenic,nongenic,nongenic -24545 upstream,5324 into,5753 into {C48D5.3},{C48D5.2b,C48D5.2c},{C48D5.2a} 2209 CB6890_redo III 3611202 1 C A 255 1.00 63 62 0 18 18 @AaaAaaaaAAaaaAAaaa point 0 SNP none {haw42583} 2210 CB6890_redo III 3613833 1 G T 255 1.00 63 62 0 22 22 @TTTttTtTTttTttTtTtTtTT point 0 SNP none {haw42588} 2212 CB6890_redo III 3616756 1 C T 255 1.00 63 62 0 24 24 @TttttTttTTttTtttTTtTTTtT point 0 SNP none {haw42597} 2213 CB6890_redo III 3625872 1 T A 255 1.00 63 62 0 32 32 @aaaAaAAAaAAaaaAaAAAAaAaaaAaAaaAa point 0 SNP none {haw42613} 2214 CB6890_redo III 3640945 1 G A 98 1.00 63 62 1 3 4 @,AAa point 0 nongenic,nongenic,nongenic,nongenic -10404 upstream,-3408 upstream,2382 into,2701 into {C32A3.2},{C46F11.1a},{C32A3.3a.2,C32A3.3a.3,C32A3.3b},{C32A3.3a.1} 2215 CB6890_redo III 3640946 1 A G 98 1.00 63 62 1 3 4 @,GGg point 0 SNP none {uCE3-839} 2216 CB6890_redo III 3641475 1 G T 255 1.00 63 62 0 37 37 @tttTtTTttttTtTTTttttTTTtTTTTTtTTTTttt point 0 SNP none {haw42649} 2217 CB6890_redo III 3641888 1 G A 255 1.00 63 62 0 44 44 @aaAAAAAAaAAAAAaAAaAAaaaaAAaAaAAaAaaaaaaaaAAA point 0 SNP none {haw42650} 2218 CB6890_redo III 3645769 1 C A 255 1.00 63 62 0 30 30 @aAaaaAAaaaaaaAAaAaAaaAaaaaaAaa point 0 nongenic,nongenic 1404 into,1416 into {C46F11.1b},{C46F11.1a} 2219 CB6890_redo III 3645821 1 T G 255 1.00 63 62 0 25 25 @CgGGGGGgGGGGGGGGgGgGgGGgG point 0 nongenic,nongenic 1456 into,1468 into {C46F11.1b},{C46F11.1a} 2223 CB6890_redo III 3715842 1 A T 29 1.00 63 4 0 4 4 @tTTT point 0 nongenic 2401 into {C14B1.6} 2224 CB6890_redo III 3715843 1 T A 43 1.00 63 4 0 6 6 @aAAAAa point 0 nongenic 2402 into {C14B1.6} 2225 CB6890_redo III 3805252 1 C G 16 1.00 63 12 1 5 6 @gGggG, point 0 nongenic,nongenic -905 upstream,502 into {T24A11.2},{T24A11.3} 2226 CB6890_redo III 3805253 1 G T 13 1.00 63 16 1 4 5 @TttT, point 0 nongenic,nongenic -906 upstream,503 into {T24A11.2},{T24A11.3} 2228 CB6890_redo III 3852542 1 C T 255 1.12 63 62 0 31 31 @TTtTTtTtTTTTtttTTTtTtTTTTtTtTtt point 0 nongenic,nongenic,nongenic -491 upstream,580 downstream,674 downstream {C36A4.6},{C36A4.8b},{C36A4.8a} 2232 CB6890_redo III 3901271 1 G A 255 1.00 63 62 0 28 28 @AaAaaAAAaAaAAaaAaAaaaAaAaaAa point 0 nongenic,nongenic -10283 upstream,173 into {F13B10.1a},{F13B10.1e.1} 2233 CB6890_redo III 3967057 1 G A 255 1.00 63 62 0 24 24 @AaaAAAAaAaAAAAaAaAAaAAaa point 0 silent GCC->GCT[Ala->Ala] {R10E9.1.1,R10E9.1.2} 2235 CB6890_redo III 3995385 1 G A 255 1.00 63 62 0 12 12 @AaAAaAAaAAaa point 0 SNP none {haw42814} 2238 CB6890_redo III 3995403 1 G T 199 1.00 63 62 0 7 7 @TtttTTT point 0 nongenic -3250 upstream {C36E8.2} 2239 CB6890_redo III 4019056 1 G C 3 1.00 63 32 2 2 4 @CC.. point 0 nongenic,nongenic -1436 upstream,-981 upstream {C36E8.5.1},{T02C12.2} 6515 CB6890_redo III 4059721 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,.,cCc indel 0 inframe none {E03A3.4} 2247 CB6890_redo III 4112942 1 G C 255 1.00 63 62 0 37 37 @ccCCCCCcCccCCccCcCcCCCCccccCCCCCCCCcc point 0 SNP none {haw42904} 2248 CB6890_redo III 4137925 1 G A 255 1.00 63 62 2 30 32 @aAa..aaaaaaaaaaaaAAAaaaaaaaaaaAa point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -39824 upstream,-758 upstream,3724 into,6677 into,8495 into,9303 into {C03C10.4},{C30D11.1f,C30D11.1g,C30D11.1h},{C30D11.1e},{C30D11.1d},{C30D11.1b,C30D11.1c},{C30D11.1a} 2249 CB6890_redo III 4209221 1 C A 168 1.12 63 62 1 7 8 @AAAAAaA. point 0 nongenic,nongenic -1312 upstream,983 downstream {F43C1.1},{R74.8a} 2250 CB6890_redo III 4209222 1 A C 200 1.12 63 62 0 10 10 @CCCCCcCccc point 0 nongenic,nongenic -1311 upstream,984 downstream {F43C1.1},{R74.8a} 2251 CB6890_redo III 4209243 1 C A 255 1.12 63 62 0 18 18 @aaaAaAaAAAaAaaAAAa point 0 nongenic -1290 upstream {F43C1.1} 2252 CB6890_redo III 4209244 1 G C 255 1.12 63 62 0 18 18 @cccCcCcCCCcCccCCCc point 0 nongenic -1289 upstream {F43C1.1} 2253 CB6890_redo III 4211087 1 G A 255 1.00 63 62 0 12 12 @AAaAaaaAAaAa point 0 missense GCA->ACA[Ala->Thr] {F43C1.1} 2254 CB6890_redo III 4213518 1 G A 255 1.00 63 62 0 44 44 @AaAAAAAAaAAAaaaAAAaAaAaAAAAaAaaAaAaaaAaAcAAa point 0 nongenic 2985 into {F43C1.1} 2255 CB6890_redo III 4216776 1 G A 255 1.00 63 62 0 26 26 @aAaaaaaaaAaaAaaaaaaAAAAAaA point 0 three_prime_UTR none {F43C1.2a.1} 2256 CB6890_redo III 4225102 1 G A 255 1.00 63 62 0 34 34 @AAAAaAAaaAAAAAAAAAAAAAaaAaAAAaAAAA point 0 nongenic,nongenic,nongenic,nongenic -4065 upstream,-5487 upstream,2944 into,2964 into {F43C1.5},{F43C1.2a.2},{F43C1.2a.1},{F43C1.2b} 2257 CB6890_redo III 4278862 1 G A 255 1.00 63 62 0 24 24 @AaAAAaaaaAAaaaAaAaAaAaaa point 0 missense CGT->TGT[Arg->Cys] {R10E4.2b.1,R10E4.2b.2,R10E4.2b.3} 2258 CB6890_redo III 4286569 1 C T 255 1.00 63 62 0 40 40 @TtTTTTtTTttTtTttTTTTTTTtTTTTTtTtTttTtttT point 0 SNP none {haw42951} 2259 CB6890_redo III 4319912 1 G A 255 1.00 63 62 0 22 22 @AaAaaAAaAaaAAAAaaAAAAA point 0 missense GAG->AAG[Glu->Lys] {H38K22.3} 2265 CB6890_redo III 4440341 1 G A 255 1.00 63 62 0 39 39 @AAAaaaAAAAaaaAAAaaAAAaaAaaaaaAAaaAAaAAA point 0 SNP none {haw42977,snp_C28A5[2]} 2266 CB6890_redo III 4440871 1 T A 255 1.00 63 62 0 23 23 @AaaaaaAAAAAAAaaAaaAaAAa point 0 SNP none {haw42978} 2267 CB6890_redo III 4445016 1 C G 34 1.00 63 50 1 8 9 @GGAGGGGG, point 0 nongenic 882 downstream {C28A5.3} 2268 CB6890_redo III 4497205 1 G A 255 1.00 63 62 0 31 31 @aAaaAaaaAAAaAAAaaAAAAAaaaaAaAAa point 0 nongenic,nongenic,nongenic -2761 upstream,1806 into,1808 into {C07G2.2d.3},{C07G2.2a,C07G2.2b,C07G2.2d.5},{C07G2.2d.1} 6521 CB6890_redo III 4539052 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @,,,c.c indel 4 nongenic,nongenic -1538 downstream,-1552 downstream {M88.1.2},{M88.1.1} 2271 CB6890_redo III 4539053 1 T G 4 1.00 63 0 0 6 6 @GGGcag point 0 nongenic,nongenic 1537 into,1551 into {M88.1.2},{M88.1.1} 2274 CB6890_redo III 4555844 1 G A 255 1.00 63 62 0 37 37 @aaaaAaaaAaaaaAAAAaaAaAAaaaAaaaaAaAAaa point 0 nongenic,nongenic,nongenic -6859 upstream,2210 into,226 into {M88.6a,M88.6b},{M88.5a},{M88.5b} 2275 CB6890_redo III 4601267 1 G A 255 1.00 63 62 0 31 31 @aAAaAaAAAaaaAAAaAaAaAaAaaaaaaaa point 0 missense CGA->CAA[Arg->Gln] {F35G12.6} 2276 CB6890_redo III 4605000 1 T A 167 1.00 63 62 1 6 7 @.AaAAAa point 0 nongenic,nongenic -11613 upstream,7302 into {F10F2.3},{F10F2.1} 2277 CB6890_redo III 4614341 1 T C 134 1.00 63 30 1 7 8 @,ccccCCc point 0 nongenic,nongenic -2039 upstream,-2272 upstream {F10F2.1},{F10F2.3} 6525 CB6890_redo III 4640495 0 X X -1000 -999.99 -1000 -1000 4 -3 1 @,..,gggg indel 0 inframe none {F10F2.5} 2278 CB6890_redo III 4675693 1 G A 252 9.44 63 62 0 12 12 @aaaaaaaaaAAa point 0 nongenic -2036 upstream {T04A8.1} 2280 CB6890_redo III 4708947 1 T G 70 1.00 63 62 1 3 4 @.Ggg point 0 nongenic,nongenic -263 upstream,601 downstream {T04A8.18},{T04A8.13} 2281 CB6890_redo III 4708948 1 G C 80 1.00 63 62 1 5 6 @.Ccccc point 0 nongenic,nongenic -262 upstream,602 downstream {T04A8.18},{T04A8.13} 6528 CB6890_redo III 4708950 2 X X -1000 -999.99 -1000 -1000 6 -5 1 @.,.... indel -2 SNP none {uCE3-874} 2282 CB6890_redo III 4712952 1 C G 255 1.00 63 62 0 29 29 @ggGgggggGgGGGggggggggggGggggg point 0 missense,SNP TGG->TGC[Trp->Cys],none {T04A8.15},{haw43017,uCE3-875} 2283 CB6890_redo III 4750685 1 A T 46 2.31 40 62 16 16 32 @,t,,,,,T,..TT.TT,t.t,.tTTTT.TT.t point 0 nongenic 435 downstream {VB0393L.2} 2284 CB6890_redo III 4761634 1 G A 255 1.00 63 62 0 42 42 @AAaaaaAaaaaAaaaaaaAAaaaAaAaaaAaAAAaaaaaaAa point 0 SNP none {haw43024} 2285 CB6890_redo III 4808803 1 G C 14 1.00 63 32 2 4 6 @,,cccc point 0 nongenic,nongenic -128 upstream,-130 upstream {C38D4.6a.1,C38D4.6b.1},{C38D4.6a.2,C38D4.6b.2} 2286 CB6890_redo III 4845216 1 A T 255 1.00 63 62 0 38 38 @TtTTTtTtTTtTtTTTtTtttttttTttttttTtTtTT point 0 missense,SNP AAT->ATT[Asn->Ile],none {F26A1.2},{haw43039} 2287 CB6890_redo III 4912950 1 G A 255 1.00 63 62 0 38 38 @aAaAaAAaAaaAAaAaAAaaAAAAaaaaaAaAAAAAaa point 0 missense GGA->GAA[Gly->Glu] {F26F4.1} 2288 CB6890_redo III 4969632 1 G T 147 1.00 63 0 0 5 5 @tTTtt point 0 nongenic,nongenic,nongenic -539 upstream,-6578 upstream,4011 into {C27F2.2b},{C27F2.9},{C27F2.2a} 2289 CB6890_redo III 4969633 1 T A 145 1.00 63 0 0 4 4 @AAaa point 0 nongenic,nongenic,nongenic -538 upstream,-6579 upstream,4012 into {C27F2.2b},{C27F2.9},{C27F2.2a} 6532 CB6890_redo III 5030205 5 X X -1000 -999.99 -1000 -1000 3 2 5 @..,ttT indel -5 nongenic,nongenic -682 upstream,607 downstream {R144.1},{R144.2a} 2305 CB6890_redo III 5376685 1 G A 255 1.00 63 62 0 16 16 @AAaAaAAAAAAAaAAa point 0 missense GCC->GTC[Ala->Val] {Y32H12A.5.1,Y32H12A.5.2} 2306 CB6890_redo III 5441067 1 G A 255 1.00 63 62 0 37 37 @AaaaaAaaAaaAaaAaaAAaaaAAaaaAAAAaAaAAa point 0 three_prime_UTR none {T24G10.2} 2309 CB6890_redo III 5467690 1 G T 102 1.00 63 62 2 5 7 @..TTTtt point 0 three_prime_UTR none {F48E8.2} 2310 CB6890_redo III 5467691 1 A G 131 1.00 63 62 1 5 6 @.GGGgg point 0 three_prime_UTR none {F48E8.2} 6539 CB6890_redo III 5471937 0 X X -1000 -999.99 -1000 -1000 2 0 2 @.,Cc indel 0 nongenic -2498 upstream {F48E8.1a,F48E8.1b,F48E8.1c} 2311 CB6890_redo III 5521925 1 G A 255 1.00 63 62 0 32 32 @AAaaaaAAAAAAAAAAAaaaAAaaaaAAaaaA point 0 missense TCT->TTT[Ser->Phe] {D1044.4} 6541 CB6890_redo III 5577371 0 X X -1000 -999.99 -1000 -1000 1 1 2 @.ggg indel 0 nongenic 731 downstream {F09F7.1} 2312 CB6890_redo III 5583034 1 A G 98 1.00 63 44 0 6 6 @GgGGGG point 0 nongenic,nongenic -54 upstream,-668 upstream {F56D2.4},{F56D2.8} 2314 CB6890_redo III 5687598 1 G A 255 1.00 63 62 0 39 39 @AAAaaaaAaAaAaaAAAAAAaaAaAaaAAAAAAaaAaAA point 0 nongenic -3549 upstream {F54E7.7} 6544 CB6890_redo III 5695323 1 X X -1000 -999.99 -1000 -1000 8 -7 1 @,,,,,,,, indel -1 SNP none {uCE3-925} 2315 CB6890_redo III 5699104 1 G A 129 1.00 63 44 1 5 6 @AaAaA. point 0 nongenic,nongenic,nongenic -1144 upstream,586 into,720 into {B0336.8},{B0336.4a},{B0336.4b} 6546 CB6890_redo III 5765139 0 X X -1000 -999.99 -1000 -1000 3 0 3 @.,.ttT indel 0 nongenic,nongenic -2693 upstream,-626 downstream {B0244.11},{B0244.2} 2319 CB6890_redo III 5766660 1 C A 139 1.00 63 62 3 10 13 @AaAaAAAaaa.,, point 0 nongenic,nongenic -1171 upstream,895 downstream {B0244.11},{B0244.2} 2320 CB6890_redo III 5766661 1 A T 137 1.00 63 62 3 9 12 @tTtTTTttt.,, point 0 nongenic,nongenic -1170 upstream,896 downstream {B0244.11},{B0244.2} 2321 CB6890_redo III 5814252 1 T C 255 1.00 63 62 0 22 22 @cCcccccCCcccCcCCcccCcC point 0 SNP none {haw43460} 2326 CB6890_redo III 5881239 1 G A 255 1.00 63 62 0 30 30 @aAAaAaaAaAaaAaaAAaAAaaAAaAaAAa point 0 missense AGT->AAT[Ser->Asn] {F01F1.1a,F01F1.1c} 2327 CB6890_redo III 5953899 1 A G 131 1.00 63 62 0 8 8 @GgGgGGgg point 0 missense TCT->CCT[Ser->Pro] {F25B5.7a,F25B5.7c} 2328 CB6890_redo III 5953900 1 T A 126 1.00 63 62 0 6 6 @AaAAaa point 0 missense AAA->AAT[Lys->Asn] {F25B5.7a,F25B5.7c} 2331 CB6890_redo III 5962999 1 C T 255 1.00 63 62 0 35 35 @tTtttTttTTTTTTTtTTTTtTtTTtTTTtTtttt point 0 SNP none {haw43492} 2332 CB6890_redo III 5987894 1 T G 134 1.00 63 62 1 5 6 @GGggg. point 0 nongenic -3931 upstream {T04C9.2} 2333 CB6890_redo III 5987895 1 G T 137 1.00 63 62 1 5 6 @TTttt. point 0 nongenic -3930 upstream {T04C9.2} 2335 CB6890_redo III 6033358 1 A T 168 1.00 63 62 0 7 7 @TttTTTT point 0 missense TCC->ACC[Ser->Thr] {ZK328.7a} 2336 CB6890_redo III 6033360 1 T G 103 1.00 63 4 0 6 6 @ggGGGG point 0 missense CAA->CCA[Gln->Pro] {ZK328.7a} 2339 CB6890_redo III 6061078 1 G A 255 1.00 63 62 0 23 23 @aAaaAAaAaAaAaAAAAAaAaAa point 0 nongenic -4387 upstream {F40H6.6} 2340 CB6890_redo III 6213448 1 G A 255 1.00 63 62 0 42 42 @aaaaaaAAAaAaAaAaAaaaAaaaaaaAaaaAAAaaAaaAAa point 0 nongenic,nongenic,nongenic 394 into,620 downstream,677 downstream {C23G10.10},{C23G10.1b},{C23G10.1a} 2341 CB6890_redo III 6229465 1 C T 255 1.00 63 62 0 20 20 @tttttTTttTTTtTTttTTt point 0 SNP none {haw43535} 2342 CB6890_redo III 6231877 1 C T 255 1.00 63 62 0 35 35 @tTTTttTttTTTtTttTTTttTTtTttTtTTTtTt point 0 SNP none {haw43536} 6555 CB6890_redo III 6280051 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @,,,.cCc indel 0 nongenic,nongenic,nongenic -1750 upstream,-276 upstream,-324 upstream {C18F10.7a.1},{F47D12.4a.1,F47D12.4a.2},{F47D12.4a.3} 2346 CB6890_redo III 6300175 1 G A 30 1.00 63 62 4 5 9 @aaaAA.,,, point 0 nongenic,nongenic,nongenic,nongenic,nongenic -9145 upstream,435 into,648 into,890 into,906 downstream {F47D12.1a,F47D12.1b,F47D12.1c,F47D12.1d},{F47D12.9a.1,F47D12.9a.2,F47D12.9b.4},{F47D12.9b.3},{F47D12.9b.1,F47D12.9b.2},{F47D12.3} 2347 CB6890_redo III 6304029 1 T C 12 1.00 63 62 2 2 4 @cc,. point 0 nongenic,nongenic -5291 upstream,-866 upstream {F47D12.1a,F47D12.1b,F47D12.1c,F47D12.1d},{F47D12.9a.1} 6556 CB6890_redo III 6305031 4 X X -1000 -999.99 -1000 -1000 7 -5 2 @,...,., indel -4 SNP none {uCE3-950} 2348 CB6890_redo III 6324042 1 C A 59 1.00 63 62 4 7 11 @AAaAAaa,... point 0 nongenic,nongenic,nongenic -2113 upstream,-7631 upstream,137 into {F47D12.10},{C56G2.4.1},{C56G2.5} 2349 CB6890_redo III 6327303 1 G A 255 1.00 63 62 1 32 33 @AaaaaaAaaaaAAA,aAaaaaAaAAaaaAaaaa point 0 nongenic,nongenic -3124 upstream,-4370 upstream {C56G2.5},{C56G2.4.1} 2350 CB6890_redo III 6337503 1 C T 16 1.50 0 16 0 8 8 @TTTTTTTT point 0 nongenic,nongenic 948 downstream,951 downstream {C56G2.7},{C56G2.6.1,C56G2.6.2} 2351 CB6890_redo III 6346025 1 G A 255 1.00 63 62 0 26 26 @AAaaAaAAAAaAAAaaAAAaAAAAAA point 0 nongenic,nongenic -2793 upstream,-894 upstream {C56G2.9},{C56G2.3} 2353 CB6890_redo III 6371224 1 A G 255 1.00 63 62 0 36 36 @ggGGgggGGgGggGGGgGgggGgGGgGgGGGgGGgg point 0 missense,SNP GAT->GGT[Asp->Gly],none {C16A3.8},{haw43559} 2354 CB6890_redo III 6411562 1 G A 255 1.00 63 62 0 38 38 @AaaAaaaAAAaAaAAaAAaAaaaAAAAaaAAaAAaAaA point 0 three_prime_UTR none {C05D11.6} 2355 CB6890_redo III 6428922 1 G A 50 1.00 63 62 5 9 14 @AaAaaAaaa,,.., point 0 SNP none {haw43564} 6560 CB6890_redo III 6468408 0 X X -1000 -999.99 -1000 -1000 5 -2 3 @..,,,GG indel 0 nongenic,nongenic -1 upstream,-1085 downstream {T26A5.2b},{T26A5.2a} 2357 CB6890_redo III 6490251 1 G A 255 1.00 63 62 0 31 31 @AaAAaAAAaAAaaaaAaAAaaAAaAAaaAaa point 0 missense GAA->AAA[Glu->Lys] {F23F12.6.1,F23F12.6.2} 2358 CB6890_redo III 6496531 1 G A 255 1.00 63 62 0 41 41 @AAaAaaaaAAAAAAaAaAaaAaaAAaAAAaaAaaAaaaaAa point 0 silent CTG->CTA[Leu->Leu] {F23F12.13} 2362 CB6890_redo III 6574694 1 T C 3 9.38 0 0 0 5 5 @GCCCC point 0 nongenic -11095 upstream {F27B3.7} 2364 CB6890_redo III 6598997 1 G A 255 1.00 63 62 0 34 34 @aAAaAaAAaAaaaaAAAaaaaaaAAAaAAAAAaA point 0 missense TCA->TTA[Ser->Leu] {F20H11.6} 2365 CB6890_redo III 6619216 1 C T 255 1.00 63 62 0 29 29 @tttTTTtTTTTtTTTtTTtTtTTTtttTT point 0 missense,SNP CTC->TTC[Leu->Phe],none {Y40D12A.1a},{haw43601} 2366 CB6890_redo III 6626308 1 G C 14 2.25 0 14 0 4 4 @cccC point 0 nongenic,nongenic -1396 upstream,-2636 upstream {C13B9.3},{C13B9.1.1,C13B9.1.2} 2367 CB6890_redo III 6626309 1 C A 14 2.25 0 6 0 4 4 @aaaA point 0 nongenic,nongenic -1397 upstream,-2635 upstream {C13B9.3},{C13B9.1.1,C13B9.1.2} 2372 CB6890_redo III 6685693 1 C A 85 1.31 63 62 7 8 15 @....AA,AA,AAA,a point 0 nongenic,nongenic,nongenic -20379 upstream,-5252 upstream,9954 into {M01G4.1},{F37A4.7a.2,F37A4.7c},{F37A4.7d} 2379 CB6890_redo III 6923579 1 G A 255 1.00 63 62 0 28 28 @AAAAAAaaAAaAAaAAAAaAAAAAAAAA point 0 SNP none {haw43734} 6565 CB6890_redo III 6925969 0 X X -1000 -999.99 -1000 -1000 5 -2 3 @,.,,,Tt indel 0 nongenic,nongenic,nongenic,nongenic -13551 upstream,-1656 downstream,-1930 downstream,-4005 upstream {T07E3.6a,T07E3.6b.1,T07E3.6b.2},{F57B9.7b},{F57B9.7a},{F57B9.6a.1} 2381 CB6890_redo III 7013025 1 G C 62 0.00 63 62 1 3 4 @ccc, point 0 nongenic,nongenic -7727 upstream,3946 into {C06E8.5},{F11H8.2} 2382 CB6890_redo III 7013026 1 C A 62 0.00 63 62 1 3 4 @aaa, point 0 nongenic,nongenic -7728 upstream,3947 into {C06E8.5},{F11H8.2} 2383 CB6890_redo III 7013479 1 G A 255 1.00 63 62 0 29 29 @aaaaAAaAAAAaaAaaaAaAaAAAAaaAa point 0 nongenic,nongenic -8181 upstream,4400 into {C06E8.5},{F11H8.2} 2384 CB6890_redo III 7021096 1 T G 53 1.00 63 62 2 5 7 @GGGgg,, point 0 nongenic,nongenic,nongenic -3 upstream,-561 upstream,-721 upstream {F11H8.1.1},{F11H8.3},{F11H8.1.2} 2385 CB6890_redo III 7028423 1 T A 255 1.00 63 62 0 33 33 @AAaaaAAaAAAaaAaAAAAAaAaAAAaaAAaaA point 0 missense,SNP ACA->TCA[Thr->Ser],none {F11H8.4a,F11H8.4b},{haw43822} 2386 CB6890_redo III 7028541 1 G A 151 1.00 63 40 0 5 5 @AaAAa point 0 nongenic 589 into {F11H8.4a,F11H8.4b} 2387 CB6890_redo III 7028623 1 A T 255 1.00 63 62 0 36 36 @ttttTtTttTTtTTtTttTtttttTtTtTtTttttT point 0 SNP none {haw43823} 2388 CB6890_redo III 7028658 1 C T 255 1.00 63 62 0 27 27 @TtTttttTTtTTTttTTtTTTTTtttt point 0 missense,SNP GAA->AAA[Glu->Lys],none {F11H8.4a,F11H8.4b},{haw43824} 2389 CB6890_redo III 7033325 1 T G 255 1.00 63 62 0 28 28 @ggggGGGgggGGGgGggGggGGGGGggG point 0 nongenic -4195 upstream {F11H8.4a,F11H8.4b} 2390 CB6890_redo III 7047284 1 A C 91 1.00 63 62 1 4 5 @Cccc, point 0 nongenic,nongenic -1628 upstream,-9223 upstream {R01H2.7},{R01H2.2} 2395 CB6890_redo III 7075890 1 G C 86 1.00 63 8 4 4 8 @.,,,CCcC point 0 missense CCG->GCG[Pro->Ala] {ZK418.6} 2397 CB6890_redo III 7118005 1 G A 255 1.00 63 62 0 21 21 @AAAaAaAAAaaaaAaAAaAAa point 0 SNP none {haw43886} 2398 CB6890_redo III 7214104 1 A C 255 1.00 63 62 0 30 30 @ccCCccCCCccCCCcCcCCCCcCCCCCcCc point 0 missense AGC->CGC[Ser->Arg] {R151.2a,R151.2b.1,R151.2b.2,R151.2b.3,R151.2b.4,R151.2b.5,R151.2c,R151.2d.1,R151.2d.2} 2404 CB6890_redo III 7236655 1 A G 56 2.62 63 2 1 4 5 @Tggg. point 0 nongenic,nongenic -2299 upstream,-2524 upstream {T20H4.3a,T20H4.3b},{T20H4.5} 2405 CB6890_redo III 7236657 1 C A 95 2.69 63 56 0 6 6 @Aaaaaa point 0 nongenic,nongenic -2297 upstream,-2526 upstream {T20H4.3a,T20H4.3b},{T20H4.5} 6572 CB6890_redo III 7238031 0 X X -1000 -999.99 -1000 -1000 7 -3 4 @,,.,,,,gggg indel 0 nongenic,nongenic -3900 upstream,-924 upstream {T20H4.5},{T20H4.3a,T20H4.3b} 2406 CB6890_redo III 7238032 1 G C 76 5.75 63 56 4 5 9 @cCCCC.... point 0 nongenic,nongenic -3901 upstream,-922 upstream {T20H4.5},{T20H4.3a,T20H4.3b} 2408 CB6890_redo III 7238034 1 G C 78 5.88 63 56 5 5 10 @cCCCC..... point 0 nongenic,nongenic -3903 upstream,-920 upstream {T20H4.5},{T20H4.3a,T20H4.3b} 2439 CB6890_redo III 7452558 1 G T 7 8.50 33 42 4 5 9 @A..ttA.,t point 0 nongenic -1377 upstream {Y69F12A.2a.1} 2443 CB6890_redo III 7453148 1 C G 6 3.00 6 8 1 6 7 @GGGGGG, point 0 nongenic,nongenic -787 upstream,-856 upstream {Y69F12A.2a.1},{Y69F12A.2a.2,Y69F12A.2b} 6574 CB6890_redo III 7494921 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @.,.,Ccc indel 0 nongenic,nongenic -5921 upstream,322 downstream {K07D8.1},{C07H6.5.1} 2447 CB6890_redo III 7528175 1 C T 104 1.00 63 62 1 4 5 @.TtTt point 0 SNP none {haw44215} 2448 CB6890_redo III 7587271 1 G T 107 1.00 63 62 3 7 10 @,..TTTttTT point 0 nongenic,nongenic,nongenic,nongenic -4369 upstream,2661 into,3011 into,3144 into {R13A5.10},{R13A5.1a.2,R13A5.1b,R13A5.1d},{R13A5.1a.1},{R13A5.1c} 6576 CB6890_redo III 7587395 0 X X -1000 -999.99 -1000 -1000 2 1 3 @,,AAa indel 0 nongenic,nongenic,nongenic,nongenic -2784 downstream,-3134 downstream,-3267 downstream,-4493 upstream {R13A5.1a.2,R13A5.1b,R13A5.1d},{R13A5.1a.1},{R13A5.1c},{R13A5.10} 2450 CB6890_redo III 7588318 1 A G 255 1.00 63 62 0 29 29 @GGggGgGgggGGGgGgGGgggGGgggggg point 0 SNP none {haw44283} 2454 CB6890_redo III 7643354 1 T A 255 1.00 63 62 0 45 45 @AAAaaaAaAAAAAAAaAAaAaAaAaaAAAAAAAaAaAaaaaAaaA point 0 SNP none {haw44321} 2455 CB6890_redo III 7643508 1 T G 57 1.00 63 62 3 5 8 @gGGgg... point 0 nongenic,nongenic -477 upstream,-479 upstream {ZK783.2.1},{ZK783.2.2} 2456 CB6890_redo III 7643509 1 G T 66 1.00 63 56 3 5 8 @tTTtt... point 0 nongenic,nongenic -478 upstream,-480 upstream {ZK783.2.1},{ZK783.2.2} 2462 CB6890_redo III 7697322 1 G A 255 1.00 63 62 0 28 28 @AAaAAaAAAAAaAaAAaAaAAaaAaaaa point 0 missense GTA->ATA[Val->Ile] {C18H2.4.1,C18H2.4.2} 2463 CB6890_redo III 7699896 1 G A 255 1.00 63 62 0 38 38 @AAAaaAaAaaaaAAAaAaaaaaAaAaaaAaaaaAAAaa point 0 nongenic,nongenic,nongenic,nongenic -5724 upstream,368 downstream,412 into,654 into {C18H2.5},{C03B8.4},{C18H2.4.1},{C18H2.4.2} 2464 CB6890_redo III 7708718 1 G T 255 6.12 63 62 0 21 21 @TTTttTttTTTTTTTTTTtTt point 0 nongenic,nongenic -3660 upstream,682 into {C03B8.3},{C03B8.4} 2466 CB6890_redo III 7713784 1 T G 59 2.31 63 56 4 6 10 @gggGgg.... point 0 nongenic,nongenic -2308 upstream,910 downstream {C03B8.2},{C03B8.3} 2467 CB6890_redo III 7713785 1 C T 57 2.31 63 58 4 6 10 @tttTtt.... point 0 nongenic,nongenic -2307 upstream,911 downstream {C03B8.2},{C03B8.3} 2468 CB6890_redo III 7721323 1 G A 255 1.00 63 62 0 19 19 @aAAaaaaaaAaAaaAAAaa point 0 nongenic -4775 upstream {ZK112.3} 2469 CB6890_redo III 7724001 1 G A 255 1.00 63 62 0 34 34 @AaaAAaaaaAaAAAaaAaAaAAaAAAaAAAAAaA point 0 nongenic -2097 upstream {ZK112.3} 2470 CB6890_redo III 7734963 1 G A 255 1.00 63 62 1 25 26 @AaaAAAaAAAaAacAAaAAaAAa.Aa point 0 missense ATG->ATA[Met->Ile] {ZK112.2} 6581 CB6890_redo III 7822734 1 X X -1000 -999.99 -1000 -1000 9 -3 6 @..,,,.... indel -1 SNP none {uCE3-1041} 2471 CB6890_redo III 7822735 1 C G 28 1.00 63 18 4 5 9 @ggGGG.... point 0 SNP none {uCE3-1041} 2472 CB6890_redo III 7844975 1 A T 255 1.00 63 62 0 29 29 @ttTTTTtttTTTtTtTtTTTTTtTTTtTt point 0 nongenic,nongenic -10067 upstream,-1412 upstream {ZK652.4.1},{ZK652.8} 2473 CB6890_redo III 7874571 1 C A 179 1.00 63 62 1 8 9 @AAaaAaAA, point 0 nongenic 865 into {C02C2.1} 2475 CB6890_redo III 7924181 1 C T 255 1.00 63 62 0 29 29 @ttttTTtttTttTttTTTttTtTtTTTtT point 0 SNP none {haw44542} 2476 CB6890_redo III 7958663 1 C T 255 1.00 63 62 0 38 38 @ttTtttTTTTtttTttttttttTTtttttTTttTtTtT point 0 SNP none {haw44573} 6585 CB6890_redo III 8053797 0 X X -1000 -999.99 -1000 -1000 1 3 4 @.Tt indel 0 nongenic,nongenic -13419 upstream,-2715 upstream {K12H4.1},{K12H4.7b} 2481 CB6890_redo III 8059765 1 C T 255 1.00 63 62 0 45 45 @TTTttTTtTTtTTTTttTttTTTTTtttttTTttttTTttTttTt point 0 nongenic,nongenic -7450 upstream,-8683 upstream {K12H4.1},{K12H4.7b} 2482 CB6890_redo III 8064604 1 C T 255 1.00 63 62 0 26 26 @TttTtTTTtTTttTTTtttTTTTttT point 0 SNP none {haw44619,snp_K12H4[1]} 2485 CB6890_redo III 8124694 1 G A 255 1.00 63 62 0 39 39 @aAaAaaaAAaaaAAaaaAAAaaaAAaAAAaAAaaAaAAa point 0 SNP none {haw44646} 2486 CB6890_redo III 8128979 1 A C 15 1.00 63 0 2 4 6 @CCCC., point 0 nongenic,nongenic -3578 upstream,495 downstream {C14B9.6b,C14B9.6c},{C14B9.7.1,C14B9.7.2} 2487 CB6890_redo III 8130396 1 G A 255 1.00 63 62 0 37 37 @AAAAaAAaaaAAaAAAaAaaAAAAAAAaaAAAaAaAa point 0 SNP none {haw44651} 2489 CB6890_redo III 8154517 1 T A 255 1.00 63 62 0 51 51 @AAaAaaaaAaAAaAaaAaAAaaaAaaaAaAaAAaaAaAAAAAaAAaaAAAA point 0 SNP none {haw44660} 2495 CB6890_redo III 8198026 1 G A 255 1.00 63 62 0 32 32 @aaaAAAAaaAAAaaaAAAaAaAAAaaAaAAaA point 0 premature_stop CAA->TAA[Gln->stop] {C50C3.9a} 2496 CB6890_redo III 8199091 1 G A 255 1.00 63 62 0 26 26 @AAaAAaaAAaAaAAAaAaAAaaAAaa point 0 missense CTT->TTT[Leu->Phe] {C50C3.9a} 2497 CB6890_redo III 8309461 1 T A 137 1.00 63 44 0 7 7 @AaaAAAa point 0 nongenic,nongenic -1461 upstream,133 into {F10E9.3.1},{F10E9.4} 2501 CB6890_redo III 8336690 1 A G 3 5.56 0 2 3 6 9 @.g,ggg,gt point 0 nongenic,nongenic -2538 upstream,731 downstream {ZC262.4},{ZC262.9} 2502 CB6890_redo III 8336693 1 C G 3 2.00 0 2 4 10 14 @g,tgg,gggt,,gg point 0 nongenic,nongenic -2541 upstream,728 downstream {ZC262.4},{ZC262.9} 2503 CB6890_redo III 8344878 1 G C 3 3.81 0 0 4 8 12 @CCC..CCCCC.. point 0 nongenic,nongenic -623 upstream,738 downstream {ZC262.7},{ZC262.10} 6593 CB6890_redo III 8344882 0 X X -1000 -999.99 -1000 -1000 9 -6 3 @..,,,,,gg,g.g indel 3 nongenic,nongenic -627 upstream,735 downstream {ZC262.7},{ZC262.10} 2508 CB6890_redo III 8423179 1 G A 17 1.00 63 26 1 3 4 @.aAa point 0 nongenic,nongenic,nongenic -3075 upstream,610 downstream,836 downstream {ZK1236.2},{ZK1236.3a},{ZK1236.3b} 163027 CB6890_redo III 8442044 127 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered,uncovered non-exonic, 1350 to 1477 bp into,non-exonic, 1353 to 1480 bp into,non-exonic, 1355 to 1482 bp into {ZK1236.7.2},{ZK1236.7.3},{ZK1236.7.1} 2535 CB6890_redo III 8454126 1 A C 49 1.00 63 4 2 4 6 @CCcc,, point 0 nongenic -16466 upstream {F42H10.5} 2536 CB6890_redo III 8454127 1 T A 4 1.00 63 48 3 3 6 @Aaa,,. point 0 nongenic -16465 upstream {F42H10.5} 2537 CB6890_redo III 8456881 1 G A 255 1.00 63 62 0 34 34 @AAaaaaaaaAAAAaaaaaAAAaAAaaaaaAAAAa point 0 nongenic -13711 upstream {F42H10.5} 2538 CB6890_redo III 8461758 1 A G 32 1.00 63 62 3 4 7 @...Gggg point 0 nongenic -8834 upstream {F42H10.5} 2539 CB6890_redo III 8461978 1 C A 255 1.00 63 62 0 39 39 @aAAaAaAAAAaaAAAAaAAaAAaAaaaaaAaaAaAAaaa point 0 SNP none {haw44763} 2542 CB6890_redo III 8503007 1 A T 255 1.00 63 62 0 31 31 @TttttttTTTTtTttTtTTTTTtTTtTTTTT point 0 SNP none {haw44793} 6600 CB6890_redo III 8512792 2 X X -1000 -999.99 -1000 -1000 8 -5 3 @,.,,.... indel -2 SNP none {snp_C04D8[5]} 2543 CB6890_redo III 8525973 1 G A 255 1.00 63 62 0 30 30 @AAaAaAaaaaAAaAAAAaaaAaaAAaAAaa point 0 missense GCA->ACA[Ala->Thr] {ZC21.9} 2544 CB6890_redo III 8563841 1 T G 30 1.00 63 62 6 8 14 @..,..,gggGGGgG point 0 nongenic,nongenic -17168 upstream,960 downstream {C06E1.3},{C02D5.1} 2545 CB6890_redo III 8563843 1 G A 137 1.00 63 30 5 12 17 @.,..,aaaAAAaAaaaa point 0 SNP none {haw44858} 2546 CB6890_redo III 8563931 1 G A 255 1.00 63 62 0 30 30 @aaaaaaaaaAAAAAAAaAAaAAaaaaaAaa point 0 SNP none {haw44859} 2554 CB6890_redo III 8575624 1 C T 182 1.00 63 62 1 6 7 @,ttTtTt point 0 nongenic -5385 upstream {C06E1.3} 2561 CB6890_redo III 8650750 1 C G 79 1.00 63 48 1 5 6 @.ggggg point 0 missense CCC->CGC[Pro->Arg] {F22B7.2} 2562 CB6890_redo III 8684179 1 T A 255 1.00 63 62 0 32 32 @AaaAAaaaaaaAaAaaAAAaAAAaAaAAaAaa point 0 SNP none {haw44984} 2563 CB6890_redo III 8684208 1 C T 255 1.00 63 62 0 31 31 @TtTTTtTtTTtTtttTttTtttTtTTttTtT point 0 SNP none {haw44985} 2564 CB6890_redo III 8684266 1 A T 79 1.00 63 30 2 7 9 @tttttTt., point 0 nongenic,nongenic -447 upstream,-666 upstream {B0303.2},{B0523.5} 2565 CB6890_redo III 8693437 1 A G 36 1.00 63 32 1 3 4 @.ggg point 0 nongenic,nongenic,nongenic -106 upstream,56 downstream,586 downstream {B0303.7a},{B0303.4.1},{B0303.4.2} 2566 CB6890_redo III 8693438 1 G A 40 1.00 63 32 1 3 4 @.aaa point 0 nongenic,nongenic,nongenic -105 upstream,57 downstream,587 downstream {B0303.7a},{B0303.4.1},{B0303.4.2} 2568 CB6890_redo III 8693607 1 G C 255 1.00 63 62 0 24 24 @CCCCcCCcCccCCCCCcccCcCcC point 0 missense TGT->TCT[Cys->Ser] {B0303.7a} 2569 CB6890_redo III 8693611 1 G A 255 1.00 63 62 0 30 30 @AAAAaAAaAaaAAAAAaaaAaAaAaaaaaA point 0 silent GGG->GGA[Gly->Gly] {B0303.7a} 2570 CB6890_redo III 8693686 1 A G 121 1.00 63 40 0 5 5 @GgGgG point 0 nongenic,nongenic,nongenic,nongenic -3192 upstream,143 into,305 downstream,835 downstream {B0303.7b},{B0303.7a},{B0303.4.1},{B0303.4.2} 2571 CB6890_redo III 8693687 1 G T 123 1.00 63 0 0 5 5 @TtTtT point 0 nongenic,nongenic,nongenic,nongenic -3191 upstream,144 into,306 downstream,836 downstream {B0303.7b},{B0303.7a},{B0303.4.1},{B0303.4.2} 2572 CB6890_redo III 8693743 1 G T 119 1.00 63 62 0 4 4 @TTtT point 0 nongenic,nongenic,nongenic,nongenic -3135 upstream,200 into,362 downstream,892 downstream {B0303.7b},{B0303.7a},{B0303.4.1},{B0303.4.2} 2573 CB6890_redo III 8693773 1 A T 255 1.00 63 62 0 19 19 @TTtTtTTTTTTTtTTTTtT point 0 SNP none {haw44992} 2574 CB6890_redo III 8701737 1 C T 255 1.00 63 62 0 38 38 @TtTTttTTttTTttTttTttttttttttTttttTTTtT point 0 silent,SNP TCC->TCT[Ser->Ser],none {B0303.9},{haw44997} 2575 CB6890_redo III 8704000 1 T A 255 1.00 63 62 0 17 17 @AAaaaAAaaAAAaaaaa point 0 SNP none {haw44999} 2576 CB6890_redo III 8710964 1 T A 255 1.00 63 62 0 30 30 @AAAaAaAaAAAaAAaAaAAAaaaaAaAAAa point 0 SNP none {haw45004} 2577 CB6890_redo III 8711826 1 C T 255 1.00 63 62 0 22 22 @TTTtTtTTTtttTTTtTttTTT point 0 SNP none {haw45005} 2578 CB6890_redo III 8712013 1 G A 255 1.19 63 62 0 34 34 @aAaaaaaAAAaAAAaAAaAaaaaaAaAAaAaAAa point 0 SNP none {haw45006} 2579 CB6890_redo III 8713028 1 A T 225 1.00 63 62 0 9 9 @TTTTttTtt point 0 nongenic,nongenic -3009 upstream,866 downstream {B0303.11},{B0303.14} 2580 CB6890_redo III 8713033 1 C T 24 1.00 63 62 3 3 6 @,..tTt point 0 nongenic,nongenic -3014 upstream,861 downstream {B0303.11},{B0303.14} 2581 CB6890_redo III 8727389 1 G A 255 1.00 63 62 0 42 42 @AAaAAAaaaAaaAaaaaaAaAaaAaaAaAAAaaaaaAaAAaA point 0 nongenic,nongenic 1891 into,2156 into {ZK370.4a},{ZK370.4b} 2582 CB6890_redo III 8733582 1 A T 255 1.00 63 62 0 34 34 @ttttTttTTTtTTTtTTtttTtttttTttTTTTt point 0 SNP none {haw45014,uCE3-1086} 2583 CB6890_redo III 8733611 1 A T 255 1.00 63 62 0 32 32 @tTtttttTttTTTTtttTTTTTtttTTTtTTT point 0 SNP none {haw45015,uCE3-1087} 2585 CB6890_redo III 8740761 1 C T 255 1.00 63 62 0 37 37 @TtTttttTTtTtTTTtTTTtttTTttttTTTtTTtTt point 0 SNP none {haw45017} 2586 CB6890_redo III 8741583 1 G C 62 1.00 63 50 2 7 9 @CccCCCC.. point 0 nongenic,nongenic,nongenic -262 upstream,-264 upstream,330 downstream {ZK370.5.1},{ZK370.5.2},{ZK370.6} 2587 CB6890_redo III 8741584 1 C G 50 1.00 63 62 2 5 7 @gGGGG.. point 0 nongenic,nongenic,nongenic -263 upstream,-265 upstream,329 downstream {ZK370.5.1},{ZK370.5.2},{ZK370.6} 2588 CB6890_redo III 8742380 1 G A 255 1.00 63 62 0 36 36 @aaAAaAAaaaaAAaaAaaaAaAaAAAaAAaaAAAAA point 0 SNP,three_prime_UTR none,none {haw45020},{ZK370.6} 2589 CB6890_redo III 8744441 1 C T 255 1.00 63 62 0 28 28 @TttTtTTtTTtTtttttttTtTTTTTTT point 0 SNP none {haw45021} 2590 CB6890_redo III 8752722 1 C T 255 1.00 63 62 0 32 32 @TtTtttTtTTTtttTtTTTttTTtTTtttTtT point 0 SNP none {haw45024} 2591 CB6890_redo III 8758065 1 T C 255 1.00 63 62 0 37 37 @CCCCccccCccCcCCCcCccCcCCCCCCCCCCcCNCC point 0 SNP none {haw45027} 2602 CB6890_redo III 8890775 1 G C 35 1.00 63 34 0 4 4 @cCcT point 0 SNP none {haw45052} 2604 CB6890_redo III 8903939 1 G A 255 1.00 63 62 0 40 40 @aaaaaAaAAaaAAAAAaaaaaAAAaAaAAaAAaaaAaaAA point 0 nongenic,nongenic,nongenic -1584 upstream,101 into,99 into {ZK637.8c,ZK637.8e},{ZK637.7b.1},{ZK637.7a,ZK637.7b.2} 6612 CB6890_redo III 8929470 0 X X -1000 -999.99 -1000 -1000 2 0 2 @.,Cc indel 0 nongenic,nongenic -2594 upstream,-3032 upstream {ZK643.1},{ZK643.7} 2608 CB6890_redo III 9025485 1 A T 255 1.00 63 62 0 31 31 @ttTTTTTtTTTtttTtttttTTTTTTtTttT point 0 SNP none {haw45122} 6615 CB6890_redo III 9026031 0 X X -1000 -999.99 -1000 -1000 5 0 5 @,..,,tTT indel 0 nongenic,nongenic -3487 upstream,-923 downstream {F59B2.14},{F59B2.13} 2609 CB6890_redo III 9042423 1 A T 255 1.00 63 62 0 30 30 @tttTTtTTTTtTtTTtTtTttTTTTttttT point 0 nongenic,nongenic -1040 upstream,731 into {R107.1.2},{R107.1.1} 2610 CB6890_redo III 9066055 1 C G 255 1.00 63 62 0 23 23 @ggGGGGggGGGgGGgGgGggggg point 0 nongenic 5616 into {R107.8} 2611 CB6890_redo III 9066056 1 G C 255 1.00 63 62 0 24 24 @ccCCCCccCCCcCCcCcCcccccc point 0 nongenic 5615 into {R107.8} 2612 CB6890_redo III 9075917 1 G A 255 1.00 63 62 0 29 29 @AAAAAaAaaaAaAaaaaaAaaaaAaaaAA point 0 missense CTT->TTT[Leu->Phe] {F02A9.1} 2613 CB6890_redo III 9083293 1 G A 255 1.00 63 62 0 44 44 @AAaAaaaAaAaAAAaaaaaaAaAaaaaaaaAaaAaaaAAAAAaa point 0 nongenic,nongenic,nongenic 868 downstream,890 downstream,979 downstream {F02A9.3.1},{F02A9.3.2},{F02A9.4b} 2614 CB6890_redo III 9101165 1 G T 199 2.00 63 62 0 9 9 @ttttttttt point 0 missense CAA->AAA[Gln->Lys] {ZK507.1} 2615 CB6890_redo III 9101166 1 C T 200 2.00 63 62 0 9 9 @ttttttttt point 0 non_start ATG->ATA[Met->Ile] {ZK507.1} 2616 CB6890_redo III 9101190 1 T A 73 2.00 63 62 1 4 5 @aaaa. point 0 nongenic,nongenic -21 upstream,-86 upstream {ZK507.1},{ZK507.3} 2617 CB6890_redo III 9101199 1 G A 59 2.00 63 62 1 3 4 @aaa. point 0 nongenic,nongenic -30 upstream,-77 upstream {ZK507.1},{ZK507.3} 2618 CB6890_redo III 9134081 1 G A 255 1.00 63 62 0 26 26 @AAAAAAaaAAAaAAAAAAaAAAaAAa point 0 nongenic -2744 upstream {ZK512.6} 2619 CB6890_redo III 9135774 1 G A 255 1.00 63 62 0 33 33 @AaaaaAaAaAaAaaAaaAaaaAaAaAaAaaaaA point 0 nongenic -1051 upstream {ZK512.6} 6618 CB6890_redo III 9150073 0 X X -1000 -999.99 -1000 -1000 6 -1 5 @....,,AAAa indel 0 nongenic,nongenic -2760 downstream,-4952 upstream {F54G8.4},{F54G8.1} 2620 CB6890_redo III 9182949 1 G A 255 1.00 63 62 0 25 25 @AaAAaaAaAAAAaaAAAaAAaAAAA point 0 missense GAA->AAA[Glu->Lys] {ZC84.2} 6619 CB6890_redo III 9260712 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,,Aa indel 0 nongenic,nongenic,nongenic,nongenic -25243 upstream,-263 downstream,-607 downstream,791 downstream {K01B6.1},{M01A8.2a},{M01A8.2b},{M01A8.1} 2622 CB6890_redo III 9263153 1 G A 255 1.00 63 62 0 39 39 @AaAaaaAAAAaAaaaaaaAAaaaAaaaAAaaaaaaaaAa point 0 SNP none {haw45230} 2623 CB6890_redo III 9264263 1 G A 255 1.00 63 62 0 45 45 @AaAaaAAAaAAaaAAAAAAAAAAAAAaaaaaaaAaAaAaaAAaaA point 0 SNP none {haw45233} 2624 CB6890_redo III 9275667 1 G A 255 1.00 63 62 0 41 41 @aaAaaaAAaaaAAaaaaAaAaaaAaaAAaaaAaAaAaAAaa point 0 nongenic,nongenic -10287 upstream,-6698 upstream {K01B6.1},{M01A8.2a,M01A8.2b} 2633 CB6890_redo III 9298564 1 C T 255 1.00 63 62 0 40 40 @ttTtTTtttTTTTtttTTtTttTTtTtTTtTttTtTTTTt point 0 SNP none {haw45256} 2634 CB6890_redo III 9341369 1 T C 255 1.00 63 62 0 34 34 @CCCCCCcccCccCccCcCCccCCCCcCcCCCCcc point 0 missense,SNP AGA->GGA[Arg->Gly],none {K04H4.1a},{haw45266} 2635 CB6890_redo III 9348777 1 A G 75 1.00 63 10 1 3 4 @,GgG point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -11391 upstream,-4427 upstream,1103 into,1122 into,1124 into,1162 into,690 into {K04H4.5},{K04H4.1a,K04H4.1b},{K04H4.2c.2},{K04H4.2a.1},{K04H4.2c.1},{K04H4.2a.2},{K04H4.2a.3,K04H4.2b} 2636 CB6890_redo III 9350628 1 C T 255 1.00 63 62 0 12 12 @TTTttttttTtt point 0 missense,SNP GGA->GAA[Gly->Glu],none {K04H4.2c.1,K04H4.2c.2},{haw45273} 2637 CB6890_redo III 9350653 1 C T 255 1.00 63 62 0 25 25 @ttTtttTTTttTTTTTtTTtTtTtT point 0 missense,SNP GAG->AAG[Glu->Lys],none {K04H4.2c.1,K04H4.2c.2},{haw45274} 2638 CB6890_redo III 9350660 1 C T 255 1.00 63 62 0 26 26 @tttTTTttTTTTTtTTtTtTtTTttt point 0 silent,SNP AGG->AGA[Arg->Arg],none {K04H4.2c.1,K04H4.2c.2},{haw45275} 2639 CB6890_redo III 9352561 1 C T 255 1.00 63 62 0 28 28 @tTTtTTttTTTtTTTtTTTtttTTtTtt point 0 silent,SNP GAG->GAA[Glu->Glu],none {K04H4.2c.1,K04H4.2c.2},{haw45277} 2640 CB6890_redo III 9355598 1 A C 255 1.00 63 62 0 30 30 @cccCcccccCcccCccCcccccccCcccCc point 0 nongenic,nongenic,nongenic -216 upstream,-234 upstream,-4570 upstream {K04H4.2a.1,K04H4.2a.2},{K04H4.2a.3,K04H4.2b,K04H4.2c.1,K04H4.2c.2},{K04H4.5} 2641 CB6890_redo III 9355599 1 C G 255 1.00 63 62 0 30 30 @gggGgggggGgggGggGgggggggGgggGg point 0 nongenic,nongenic,nongenic -217 upstream,-235 upstream,-4569 upstream {K04H4.2a.1,K04H4.2a.2},{K04H4.2a.3,K04H4.2b,K04H4.2c.1,K04H4.2c.2},{K04H4.5} 2643 CB6890_redo III 9407617 1 G A 223 4.06 63 62 0 16 16 @AAAAAAAAAAAAAAAA point 0 nongenic -1074 upstream {T26G10.1} 2644 CB6890_redo III 9409056 1 T G 149 2.06 63 62 0 13 13 @GGGgggGGgGggg point 0 nongenic -2513 upstream {T26G10.1} 2645 CB6890_redo III 9409292 1 C G 255 1.62 63 62 0 23 23 @GgGgggGGgGgGgGggggggGgG point 0 nongenic -2749 upstream {T26G10.1} 2648 CB6890_redo III 9417682 1 T A 3 2.88 0 26 5 9 14 @AaaaAaaaA..,., point 0 nongenic,nongenic -2749 upstream,-4340 upstream {T26G10.4},{T26G10.3} 2649 CB6890_redo III 9417686 1 A T 3 2.50 0 24 6 7 13 @ttTtttT..,.,, point 0 nongenic,nongenic -2745 upstream,-4344 upstream {T26G10.4},{T26G10.3} 2651 CB6890_redo III 9419174 1 A T 44 3.00 35 62 4 10 14 @,,..TTTTTTTTtT point 0 nongenic,nongenic -1257 upstream,-5832 upstream {T26G10.4},{T26G10.3} 2653 CB6890_redo III 9447126 1 A T 23 1.00 63 62 3 4 7 @tTTT.,, point 0 nongenic,nongenic -3598 upstream,1122 into {F54C8.4},{F54C8.6} 2654 CB6890_redo III 9448445 1 C G 255 1.00 63 62 0 31 31 @ggGGgGgGGGggggGgGGgGGGgGGgGGGgg point 0 SNP none {haw45304} 2655 CB6890_redo III 9449797 1 C T 255 1.00 63 62 0 48 48 @ttttTTTTttTTtTttTtTtttTtTTTTttTTttTTtTtTTtTTTTtT point 0 SNP none {haw45305} 2656 CB6890_redo III 9450593 1 C A 255 1.00 63 62 0 36 36 @aAAaaaAaaAAaAaAaaaAaAAAaAAaaaAAaAaAA point 0 SNP none {haw45306} 2657 CB6890_redo III 9451505 1 G C 255 1.00 63 62 0 29 29 @CCCCCcCccCcCcCccccCcccccCcCcc point 0 SNP,three_prime_UTR none,none {haw45307},{F54C8.7a} 2658 CB6890_redo III 9452439 1 G T 255 1.00 63 62 0 22 22 @CTTtTTttTTtTtTttTttTtt point 0 SNP none {haw45308,snp_F54C8[1]} 2659 CB6890_redo III 9479166 1 G A 255 1.00 63 62 0 35 35 @aAAaaaaAaAaaaAaaAaaaaAAAaaaAaaaAAaA point 0 SNP none {haw45312} 6627 CB6890_redo III 9547171 4 X X -1000 -999.99 -1000 -1000 12 -10 2 @.......,.,.. indel -4 SNP none {snp_ZK1098[2]} 163029 CB6890_redo III 9571114 149 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered non-exonic, 7758 to 7907 bp into,non-exonic, 8511 to 8660 bp into {C48B4.4a,C48B4.4b,C48B4.4c},{C48B4.4d} 2663 CB6890_redo III 9571278 1 C T 115 1.00 63 62 0 4 4 @ttTt point 0 nongenic,nongenic 691 into,985 into {C48B4.4a,C48B4.4c,C48B4.4d},{C48B4.4b} 2664 CB6890_redo III 9571279 1 G C 116 1.00 63 62 0 5 5 @ccCcC point 0 nongenic,nongenic 692 into,986 into {C48B4.4a,C48B4.4c,C48B4.4d},{C48B4.4b} 2666 CB6890_redo III 9583725 1 A T 255 1.00 63 62 0 21 21 @tTtTTTTTTtTTTtTtTtttT point 0 SNP none {haw45342} 2667 CB6890_redo III 9590111 1 T C 110 1.00 63 32 1 5 6 @,CccCc point 0 nongenic,nongenic,nongenic -7849 upstream,1983 into,1985 into {C48B4.3},{C48B4.1.2},{C48B4.1.1} 2668 CB6890_redo III 9590112 1 G T 152 1.00 63 62 0 5 5 @TttTt point 0 nongenic,nongenic,nongenic -7850 upstream,1982 into,1984 into {C48B4.3},{C48B4.1.2},{C48B4.1.1} 2670 CB6890_redo III 9643534 1 C G 255 1.00 63 62 0 19 19 @GgGGggGgGgGGggggGgg point 0 SNP none {uCE3-1110} 2671 CB6890_redo III 9643535 1 G C 255 1.00 63 62 1 18 19 @CcCCccCcC.CCccccCcc point 0 SNP none {uCE3-1111} 2672 CB6890_redo III 9727259 1 G A 255 1.00 63 62 0 34 34 @aaAAAaAAAAaAAAaaAAAaaAaAaaAAAAaAaa point 0 missense GCT->GTT[Ala->Val] {C07A9.12} 2673 CB6890_redo III 9754430 1 C A 255 1.00 63 62 0 42 42 @AaAAaaaAAaaAAaaaaAAAaaAaaaAAaaaAAaAaaAAAAA point 0 missense,SNP GAG->GAT[Glu->Asp],none {T05G5.8.1,T05G5.8.2},{haw45405} 2680 CB6890_redo III 9796154 1 T C 255 1.00 63 62 0 34 34 @CcCCCccCCccCccccCcCcCCCCCccCCcCcCc point 0 SNP none {haw45434} 2681 CB6890_redo III 9858891 1 A G 9 1.00 63 62 4 4 8 @GgGg,... point 0 nongenic,nongenic,nongenic -1736 upstream,-490 upstream,190 into {K11H3.7},{K11H3.1b},{K11H3.1a,K11H3.1c.2,K11H3.1d.2} 2682 CB6890_redo III 9870315 1 T G 7 1.00 63 60 2 3 5 @.,GgG point 0 nongenic,nongenic -2630 upstream,692 into {ZK757.4a,ZK757.4c},{ZK757.1} 2683 CB6890_redo III 9870316 1 G C 60 1.00 63 6 1 5 6 @,CcCcc point 0 nongenic,nongenic -2631 upstream,691 into {ZK757.4a,ZK757.4c},{ZK757.1} 2684 CB6890_redo III 9913766 1 C A 255 1.06 63 62 0 34 34 @AAaAAAAaAaAaAaaAaAAAAaAaAaaaaAaAAA point 0 nongenic,nongenic,nongenic -3211 upstream,-390 upstream,-670 upstream {F40F12.5},{F40F12.7.1,F40F12.7.2},{F40F12.7.3} 2685 CB6890_redo III 9918742 1 C G 255 1.00 63 62 0 21 21 @gggGGgGggggGgGGGGgggg point 0 silent GGG->GGC[Gly->Gly] {F40F12.3} 2686 CB6890_redo III 9920715 1 G T 255 1.00 63 62 0 24 24 @tTttttTTTTtTTTTTTTTTtTCC point 0 SNP none {haw45505} 2687 CB6890_redo III 9920824 1 C T 30 1.00 63 62 3 4 7 @...TTtt point 0 SNP none {haw45506} 2688 CB6890_redo III 9920856 1 G T 255 1.00 63 62 0 15 15 @TTttTtttTTtttTt point 0 SNP none {haw45507} 2689 CB6890_redo III 9938706 1 T C 20 3.88 63 54 33 39 72 @c.cccC,CC.,Cccc,CC,cc.ccc.CcCcc..C.cC,cccc.,cC.CCcCc.C..c........,..,.,, point 0 nongenic 902 into {K03H1.5} 2691 CB6890_redo III 9942889 1 T A 255 1.00 63 62 0 40 40 @aAaAAAAAAaaaaaaaAaaAAaAAaaaaaAaaAAAAaAaa point 0 SNP none {haw45518} 2692 CB6890_redo III 9956571 1 A C 255 1.00 63 62 0 25 25 @CCCCccCcccCcCCccCcccCCCCc point 0 nongenic,nongenic,nongenic -458 upstream,-682 upstream,-683 upstream {K03H1.2.1,K03H1.2.2},{R10E12.1a},{R10E12.1b,R10E12.1c,R10E12.1d} 2698 CB6890_redo III 10016572 1 A G 255 1.00 63 62 1 32 33 @gg,gggggggggGGGgGGGGGGGggGGGGGggG point 0 SNP none {haw45557} 2700 CB6890_redo III 10019932 1 G T 255 1.00 63 62 0 31 31 @TTTTTTtTTTTTTTTTttTTtTttTtTtTtt point 0 SNP none {haw45564} 2705 CB6890_redo III 10032182 1 C T 33 1.00 63 44 3 6 9 @tttttt.,. point 0 SNP none {haw45577} 2706 CB6890_redo III 10035095 1 G T 255 1.00 63 62 0 16 16 @TTTTtTTTTTttTttT point 0 SNP none {haw45579} 2707 CB6890_redo III 10035117 1 G T 171 1.00 63 62 0 7 7 @ttTttTt point 0 nongenic,nongenic -780 upstream,120 downstream {M04D8.6},{M04D8.8} 2708 CB6890_redo III 10035128 1 G T 138 1.00 63 62 0 5 5 @tTttT point 0 nongenic,nongenic -769 upstream,131 downstream {M04D8.6},{M04D8.8} 2709 CB6890_redo III 10035139 1 C T 211 1.44 63 62 0 9 9 @TttTttttT point 0 nongenic,nongenic -758 upstream,142 downstream {M04D8.6},{M04D8.8} 2710 CB6890_redo III 10035170 1 C T 255 1.56 63 62 0 20 20 @TttttTTtttTtTTTttttT point 0 nongenic,nongenic -727 upstream,173 downstream {M04D8.6},{M04D8.8} 2711 CB6890_redo III 10035184 1 A T 255 3.81 63 62 0 24 24 @TTtttTtTTTttttTTtTtttTtt point 0 nongenic,nongenic -713 upstream,187 downstream {M04D8.6},{M04D8.8} 2712 CB6890_redo III 10035309 1 G T 255 1.00 63 62 0 37 37 @TtTtTtTTtTtTtTttttTTttttTtTTTTTTTTTTT point 0 SNP none {haw45580} 2713 CB6890_redo III 10035384 1 G A 255 1.00 63 62 0 17 17 @AAAaAaAAAAaAAaAAA point 0 SNP none {haw45581} 2714 CB6890_redo III 10035425 1 C A 255 1.44 63 62 0 29 29 @AaAAAAAAaaaAAAAAAaaAAAAaAAaAA point 0 nongenic,nongenic -472 upstream,428 downstream {M04D8.6},{M04D8.8} 2715 CB6890_redo III 10036023 1 G A 255 1.00 63 62 0 32 32 @AAaaAAaAAAAaAaAAaAAaAaAaaAaAaaaa point 0 SNP none {haw45582} 2716 CB6890_redo III 10061336 1 G C 13 1.00 63 4 2 4 6 @ccCC,, point 0 nongenic,nongenic -1840 upstream,478 into {T16G12.5},{T16G12.8} 2717 CB6890_redo III 10061337 1 C G 5 1.00 63 12 2 3 5 @gGG,, point 0 nongenic,nongenic -1839 upstream,477 into {T16G12.5},{T16G12.8} 163030 CB6890_redo III 10100788 60 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 630 to 690 bp into {T16H12.6} 2724 CB6890_redo III 10100858 1 C G 50 1.00 63 0 0 5 5 @ggGgg point 0 nongenic,nongenic -2883 upstream,620 into {T16H12.5b.1},{T16H12.6} 2730 CB6890_redo III 10130584 1 C T 70 1.00 63 62 1 3 4 @ttt. point 0 nongenic,nongenic,nongenic -6381 upstream,1534 into,2035 into {ZK1128.7},{ZK1128.6b.1,ZK1128.6b.2},{ZK1128.6a} 6643 CB6890_redo III 10131665 0 X X -1000 -999.99 -1000 -1000 7 -3 4 @.,,..,,Tt indel 0 nongenic,nongenic,nongenic -453 downstream,-5301 upstream,-954 downstream {ZK1128.6b.1,ZK1128.6b.2},{ZK1128.7},{ZK1128.6a} 2736 CB6890_redo III 10147954 1 T G 117 1.69 63 62 0 4 4 @GggG point 0 nongenic -4734 upstream {K08E5.2a,K08E5.2b.2,K08E5.2b.3} 2737 CB6890_redo III 10148031 1 C G 255 1.12 63 62 0 16 16 @ggGgggggggggggGg point 0 nongenic -4657 upstream {K08E5.2a,K08E5.2b.2,K08E5.2b.3} 6644 CB6890_redo III 10213728 1 X X -1000 -999.99 -1000 -1000 5 -3 2 @,,,.. indel -1 SNP none {uCE3-1145} 2738 CB6890_redo III 10216181 1 G A 255 1.00 63 62 0 35 35 @aaAaAaAAAaAaaaAAaAAaAAAAAAaaaAAaAaA point 0 missense CGT->TGT[Arg->Cys] {T20G5.2.1,T20G5.2.2} 2755 CB6890_redo III 10268023 1 G A 255 1.25 63 62 0 36 36 @AaaaaaaaaAAAaaaaAAaaaaaaaaaaaaAaaaaa point 0 nongenic,nongenic -3127 upstream,-747 upstream {R01H10.8},{R01H10.7} 2756 CB6890_redo III 10277507 1 C T 255 1.00 63 62 0 32 32 @ttTTTtTTtttttttTttTttTtTttttTTTt point 0 nongenic,nongenic,nongenic -10231 upstream,-1515 upstream,967 into {R01H10.7},{K10G9.3},{R01H10.8} 2757 CB6890_redo III 10282658 1 T G 26 1.00 63 4 4 6 10 @GGgGgG,,.. point 0 nongenic -3158 upstream {K10G9.2} 2758 CB6890_redo III 10287323 1 C T 255 1.00 63 62 0 31 31 @ttttttttTTtTtTtTtTttTTttTTtTtTT point 0 SNP none {haw45760} 6646 CB6890_redo III 10289290 0 X X -1000 -999.99 -1000 -1000 1 2 3 @,GG indel 0 nongenic,nongenic -5738 upstream,784 downstream {K10G9.1},{K10G9.2} 2759 CB6890_redo III 10289344 1 G C 255 1.00 63 62 0 31 31 @CCcCCcccccCccCcCcCcCcCCcCcCcCcC point 0 SNP none {haw45764} 2760 CB6890_redo III 10291745 1 C A 27 1.00 63 62 1 3 4 @aag. point 0 nongenic -3282 upstream {K10G9.1} 2761 CB6890_redo III 10291756 1 T A 215 1.00 63 62 0 10 10 @aaAaAAaaaA point 0 nongenic -3271 upstream {K10G9.1} 2765 CB6890_redo III 10354930 1 A T 255 1.00 63 62 0 32 32 @tTTTtttTTTtTttTttTTTttttTttTTTTT point 0 SNP,three_prime_UTR none,none {haw45800},{T07C4.3b} 2766 CB6890_redo III 10357021 1 G A 255 1.00 63 62 0 35 35 @AaaAAaaAAaAaaaAAaAAaAaAaAAaaaAAAAAa point 0 missense CAC->TAC[His->Tyr] {T07C4.1.1,T07C4.1.2} 2770 CB6890_redo III 10361911 1 T G 255 1.00 63 62 0 39 39 @gGGGgGGggGgGGGGggggggGGggggGggggggggGGG point 0 SNP none {haw45805} 2771 CB6890_redo III 10368133 1 G A 255 1.00 63 62 1 24 25 @AAAAAAAaAaAaaAaAaAaaaA.aa point 0 SNP none {haw45808} 2774 CB6890_redo III 10372381 1 A T 255 1.00 63 62 0 28 28 @TTtTtTTtttTTtTttttTTTtTTtttT point 0 nongenic,nongenic,nongenic -14794 upstream,-9282 upstream,742 into {T07C4.1.1},{C38H2.2},{C38H2.1} 2776 CB6890_redo III 10378480 1 A G 20 1.00 63 62 4 5 9 @,,,.Ggggg point 0 nongenic -3183 upstream {C38H2.2} 2780 CB6890_redo III 10382538 1 T A 214 0.00 63 62 0 11 11 @aaaaaaaaaaa point 0 nongenic 875 into {C38H2.2} 2781 CB6890_redo III 10382540 1 T A 171 0.00 63 62 1 10 11 @.aaaaaaaaaa point 0 nongenic 877 into {C38H2.2} 2782 CB6890_redo III 10385216 1 C G 32 1.00 63 62 3 6 9 @,..gggGgg point 0 nongenic,nongenic 15 downstream,301 downstream {C38H2.2},{C38H2.3} 2783 CB6890_redo III 10388877 1 A T 57 1.00 63 62 2 5 7 @TtTtt,. point 0 nongenic -2413 upstream {C38H2.3} 2787 CB6890_redo III 10399084 1 C A 255 1.00 63 62 0 35 35 @AaaaAAaaAaaaaaAAAAaAaAaaaaAAAaAaAaA point 0 SNP none {haw45839} 2794 CB6890_redo III 10428172 1 A T 23 1.00 63 62 2 3 5 @,.ttt point 0 nongenic,nongenic,nongenic -298 upstream,-300 upstream,49 downstream {M03C11.7.1},{M03C11.7.2},{M03C11.8} 2795 CB6890_redo III 10428174 1 T G 63 1.00 63 22 1 3 4 @.ggg point 0 nongenic,nongenic,nongenic -300 upstream,-302 upstream,47 downstream {M03C11.7.1},{M03C11.7.2},{M03C11.8} 2796 CB6890_redo III 10454269 1 G A 255 1.00 63 62 0 27 27 @aaAaAaAaAaaaaaAAAAAAAAAaAAa point 0 SNP none {haw45927} 2797 CB6890_redo III 10482439 1 G A 255 1.00 63 62 0 42 42 @AaaaaaaaaaaAAaaAaAAaaAAAAaAAAAAAaaaAAAaAaa point 0 nongenic,nongenic,nongenic -5576 upstream,226 into,407 downstream {F43D9.1},{D2045.8},{D2045.7} 6650 CB6890_redo III 10483637 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @,.,..,gG indel 0 inframe none {D2045.8} 2798 CB6890_redo III 10483638 1 C A 88 1.00 63 62 2 5 7 @aAaaA., point 0 missense,SNP CCA->CAA[Pro->Gln],none {D2045.8},{haw45977} 2799 CB6890_redo III 10498007 1 G A 255 1.00 63 62 0 25 25 @AAAAaAaaAAAAAAAaAAAAaaAAA point 0 SNP none {haw45998} 2804 CB6890_redo III 10499626 1 C A 25 1.00 63 62 3 5 8 @...aAAaA point 0 nongenic,nongenic 529 into,544 downstream {F43D9.1},{F43D9.2} 2805 CB6890_redo III 10499627 1 A C 75 1.00 63 24 2 5 7 @..cCCcC point 0 nongenic,nongenic 528 into,543 downstream {F43D9.1},{F43D9.2} 2806 CB6890_redo III 10500602 1 G A 255 1.00 63 62 0 29 29 @AaAaAaAaaAaaaaaAAaaAAAAAAAAaa point 0 silent,SNP TTC->TTT[Phe->Phe],none {F43D9.2},{haw46003} 2807 CB6890_redo III 10500798 1 C T 255 1.00 63 62 0 38 38 @tttttTTttttttTTTTTtTtTTTTTTTtTTttTTtTt point 0 SNP none {haw46004} 2808 CB6890_redo III 10500854 1 C T 255 1.00 63 62 0 31 31 @ttTTTTTttTtttttttTTTtTtttttTttt point 0 SNP none {haw46006} 2809 CB6890_redo III 10501170 1 C T 255 1.00 63 62 0 30 30 @TTttTtTTTTTtTTTTtTTTTTTtTtttTt point 0 SNP none {haw46010} 2810 CB6890_redo III 10502428 1 G A 255 1.00 63 62 0 36 36 @aaaAaAAaaaAaAaaaaAaAaaaaaaaAaaAaaaaa point 0 SNP none {haw46016} 2811 CB6890_redo III 10502726 1 C T 255 1.00 63 62 0 16 16 @TTttttttttTtTTtt point 0 SNP none {haw46017} 2812 CB6890_redo III 10503428 1 G A 255 1.00 63 62 0 30 30 @AaaaaaaAAaaAaaAAAAAaAaAAAAAAAa point 0 nongenic,nongenic 311 into,531 downstream {F43D9.2},{F43D9.5} 2813 CB6890_redo III 10512573 1 C T 255 1.00 63 62 0 31 31 @tTTttTTTTttttTTtTTTtTttTTttTttt point 0 SNP,three_prime_UTR none,none {haw46030},{F43D9.3a} 2814 CB6890_redo III 10512825 1 C T 255 1.00 63 62 0 31 31 @ttTttTTTttttTtTttTTTTTtTtttTttt point 0 SNP,three_prime_UTR none,none {haw46031},{F43D9.3a} 2815 CB6890_redo III 10513932 1 C T 255 1.00 63 62 0 32 32 @TTTtTTttttttttTTTttTTtTtTttTTtTT point 0 SNP none {haw46034} 2816 CB6890_redo III 10514115 1 G A 255 1.00 63 62 0 24 24 @aAAaaaaaaaAaaaaAaaAaaaaa point 0 SNP none {haw46035} 2818 CB6890_redo III 10520156 1 G T 43 1.00 63 62 2 4 6 @TTtt.. point 0 nongenic,nongenic -405 upstream,-531 upstream {T21C12.1b},{T21C12.1a} 2819 CB6890_redo III 10520298 1 A C 255 1.00 63 62 0 21 21 @cCCcCCCCcCCCCcCCcCCcC point 0 SNP none {haw46040} 2820 CB6890_redo III 10528187 1 G C 255 1.00 63 62 0 41 41 @CcCCCccccCCcccCCcCccCCCccCCcccCCCCcccCCCC point 0 SNP none {haw46050} 2822 CB6890_redo III 10529997 1 C A 25 1.00 63 8 1 4 5 @.AaAA point 0 missense CCT->ACT[Pro->Thr] {T21C12.1a} 2828 CB6890_redo III 10553060 1 G A 9 1.00 63 62 2 3 5 @.,AaA point 0 missense CCA->TCA[Pro->Ser] {T21C12.4a,T21C12.4b} 2829 CB6890_redo III 10553062 1 A C 73 1.00 63 8 1 3 4 @,CcC point 0 missense GTT->GGT[Val->Gly] {T21C12.4a,T21C12.4b} 2846 CB6890_redo III 10601839 1 G A 255 1.00 63 62 0 22 22 @AaAAaAAaaAaaAAaAAaAAAA point 0 silent TGC->TGT[Cys->Cys] {Y39A1A.2} 2847 CB6890_redo III 10603836 1 C A 255 1.12 63 62 0 29 29 @AAAAaaaaAaaAAAAAAaAAaAAatAAAa point 0 nongenic,nongenic -402 upstream,-423 upstream {Y39A1A.2},{Y39A1A.5} 2848 CB6890_redo III 10643645 1 G A 255 1.00 63 62 0 26 26 @AAAaaaaaAAAaaAAAaAAAAaaAaA point 0 missense GTA->ATA[Val->Ile] {Y39A1A.12.1,Y39A1A.12.2} 2852 CB6890_redo III 10694917 1 A T 255 1.00 63 62 0 37 37 @TtTTTTtttttTTtTtttttTtttttTTtttttttTT point 0 nongenic,nongenic -2140 upstream,387 into {Y39A1A.18},{Y39A1A.19} 2853 CB6890_redo III 10877263 1 G A 255 1.00 63 62 0 27 27 @AAAAaAaAAaaAAaaaAaaAAAaaaaa point 0 missense GCT->ACT[Ala->Thr] {C44B9.2} 2859 CB6890_redo III 10945644 1 G A 255 1.00 63 62 0 18 18 @AAAAaAAaAaAaaAaAAa point 0 silent CCG->CCA[Pro->Pro] {M142.6} 2860 CB6890_redo III 10981757 1 G A 255 1.00 63 62 1 24 25 @AaAAAAAaAAAaaAA.aAAAAaAaA point 0 nongenic,nongenic 24 downstream,292 downstream {W05B2.4},{W05B2.6} 2861 CB6890_redo III 11016885 1 T C 255 1.00 63 62 0 21 21 @cCcCCcccCccCccCcccCCC point 0 SNP none {haw46705} 2862 CB6890_redo III 11051261 1 C A 255 1.00 63 62 0 36 36 @AAaAAAaaAAaAAAaaAAAaAAaaAAAAAAaAaaaA point 0 nongenic -1529 upstream {Y48A6B.13.1} 6662 CB6890_redo III 11138477 0 X X -1000 -999.99 -1000 -1000 7 -6 1 @,..,,,,ctc indel 4 nongenic,nongenic -302 downstream,668 downstream {Y47D3A.2},{Y47D3A.1} 2863 CB6890_redo III 11141578 1 G A 255 1.00 63 62 0 35 35 @AAaAAAAaAAAaAAAaAaAaaaaAAAAAaaAAaAa point 0 five_prime_UTR none {Y47D3A.1} 2864 CB6890_redo III 11227997 1 G A 255 1.00 63 62 0 29 29 @AAaAaAaaaaaaaaaaaaaaaaaaAAAAA point 0 nongenic -751 upstream {Y47D3A.12} 2865 CB6890_redo III 11294888 1 C T 207 2.00 63 62 8 23 31 @tttt,,,tttTTt,tttt,tTtT,t,tt,tt point 0 nongenic,nongenic,nongenic -4304 upstream,4094 into,4099 into {Y47D3A.22},{Y47D3A.26.2,Y47D3A.26b},{Y47D3A.26.1} 2866 CB6890_redo III 11318804 1 C A 31 1.00 63 0 0 4 4 @aaaa point 0 nongenic,nongenic -1864 upstream,1351 into {Y47D3A.27},{Y47D3A.28} 2868 CB6890_redo III 11326567 1 G T 121 1.00 63 62 4 10 14 @TTttTtTTTT,... point 0 SNP,three_prime_UTR none,none {haw46989},{T28D6.6} 2869 CB6890_redo III 11326568 1 A G 121 1.00 63 62 4 10 14 @GGggGgGGGG,... point 0 SNP,three_prime_UTR none,none {haw46990},{T28D6.6} 2874 CB6890_redo III 11360218 1 G A 255 1.00 63 62 0 40 40 @AaaaaAaaaAAaAaaAAaaAaAAaAAAaaaaAAAaAAaAa point 0 nongenic,nongenic -120 upstream,-13545 upstream {T28D6.4},{T28D6.7} 2876 CB6890_redo III 11426621 1 G A 255 1.00 63 62 0 33 33 @AaAAaAAaAAAaaAaaaAAaaaaAAAAAaaaAa point 0 nongenic -396 upstream {Y47D3B.6} 2883 CB6890_redo III 11472333 1 T A 255 1.00 63 62 0 20 20 @aAaaaaaaaaaaaaaaaaaa point 0 nongenic -1644 upstream {Y47D3B.9} 2884 CB6890_redo III 11480573 1 G A 255 1.00 63 62 0 38 38 @AaaaaaaaaaaAaaaaaAAaaAAAaAaaAaaAaaAaAA point 0 SNP none {haw47230} 2885 CB6890_redo III 11486301 1 G C 255 1.00 63 62 0 24 24 @cCcCcCccccCcCcccCCCCCcCc point 0 SNP none {haw47238} 2886 CB6890_redo III 11486397 1 T A 132 1.00 63 62 1 6 7 @.AAAAaA point 0 nongenic,nongenic -2131 upstream,812 into {Y66A7A.1},{Y66A7A.2} 6665 CB6890_redo III 11490491 0 X X -1000 -999.99 -1000 -1000 3 -2 1 @.cgg.g,g indel 1 nongenic,nongenic,nongenic -2205 downstream,-3282 upstream,-6263 upstream {Y66D12A.23},{Y66A7A.2},{Y66D12A.24} 2890 CB6890_redo III 11504646 1 C A 255 1.00 63 62 0 27 27 @aaAaaaAaaAAAaAAAaaAaAaAAAAa point 0 SNP none {haw47276} 2891 CB6890_redo III 11516787 1 C T 255 1.00 63 62 0 20 20 @TtttttTTTttTTTTTTTTT point 0 SNP none {haw47292} 2895 CB6890_redo III 11529305 1 G A 236 1.00 63 62 0 9 9 @AaaaAAaAA point 0 nongenic,nongenic -5251 upstream,3051 into {Y66D12A.14},{Y66D12A.15} 2896 CB6890_redo III 11529315 1 T A 109 1.00 63 50 0 4 4 @AaAA point 0 nongenic,nongenic -5241 upstream,3061 into {Y66D12A.14},{Y66D12A.15} 2901 CB6890_redo III 11529331 1 A T 29 2.00 50 0 0 6 6 @tttTTt point 0 nongenic,nongenic -5225 upstream,3077 into {Y66D12A.14},{Y66D12A.15} 2902 CB6890_redo III 11543276 1 G A 255 1.00 63 62 0 21 21 @aaAaAAaAaAAAAAAAAaaaa point 0 missense,SNP GGA->GAA[Gly->Glu],none {Y66D12A.14},{haw47330,uCE3-1248} 2904 CB6890_redo III 11555773 1 C G 4 1.00 63 28 6 8 14 @,GGGG....ggg.g point 0 nongenic -5260 upstream {Y66D12A.12} 2905 CB6890_redo III 11562920 1 T G 12 1.00 63 62 3 8 11 @A.A.A.AGGGG point 0 nongenic,nongenic -492 upstream,381 downstream {Y66D12A.11},{Y66D12A.12} 2906 CB6890_redo III 11562926 1 T G 96 1.00 63 62 2 11 13 @C.A.AGGGGGGGa point 0 nongenic,nongenic -486 upstream,387 downstream {Y66D12A.11},{Y66D12A.12} 2909 CB6890_redo III 11572787 1 A C 4 1.00 63 0 1 6 7 @CTC,CCc point 0 nongenic,nongenic -1317 upstream,375 into {Y66D12A.8},{Y66D12A.9} 2911 CB6890_redo III 11576713 1 C G 255 1.00 63 62 0 22 22 @GGGgggggggGggggGggGggG point 0 missense,SNP GCA->GGA[Ala->Gly],none {Y66D12A.8},{haw47425} 2913 CB6890_redo III 11592111 1 G A 255 1.00 63 62 0 25 25 @aaAAaAAAAaAaAAaaaAAAaaaAA point 0 nongenic,nongenic -15941 upstream,601 into {Y66D12A.1},{Y66D12A.3} 2919 CB6890_redo III 11612396 1 T C 255 1.00 63 62 0 31 31 @CCCCccCCcCCCCcCcCCCCCCCCccCcccc point 0 nongenic -93 upstream {Y66A7A.4} 2920 CB6890_redo III 11613448 1 G A 255 1.00 63 62 0 27 27 @AaaaaaaaAaAaAAaaaaaaaAAaaaa point 0 silent GCG->GCA[Ala->Ala] {Y66A7A.4} 2921 CB6890_redo III 11682308 1 G T 212 2.44 63 62 0 13 13 @TTTTTTTTTTTtT point 0 nongenic,nongenic,nongenic,nongenic,nongenic,nongenic -14263 upstream,11353 into,6764 into,6857 into,6864 into,7764 into {Y41C4A.6},{Y41C4A.4c},{Y41C4A.4b},{Y41C4A.4a},{Y41C4A.4d},{Y41C4A.4e} 2922 CB6890_redo III 11688496 1 G A 255 1.00 63 62 0 30 30 @aaaaaaaaAAaAaAaAAAaaAAaaAAaAAa point 0 nongenic,nongenic,nongenic,nongenic,nongenic -8075 upstream,4942 into,5165 into,5222 into,5225 into {Y41C4A.6},{Y41C4A.4b,Y41C4A.4d},{Y41C4A.4c},{Y41C4A.4e},{Y41C4A.4a} 2926 CB6890_redo III 11694298 1 C A 163 1.00 63 62 0 10 10 @aAAaAaAaAg point 0 nongenic,nongenic,nongenic -2273 upstream,577 downstream,580 downstream {Y41C4A.6},{Y41C4A.4a},{Y41C4A.4e} 2927 CB6890_redo III 11809758 1 T C 255 1.00 63 62 0 13 13 @CccccccCccCCc point 0 nongenic,nongenic -121 upstream,313 downstream {C18D11.6},{C18D11.9} 2929 CB6890_redo III 11833075 1 G C 3 1.00 63 2 0 4 4 @CCtc point 0 nongenic,nongenic,nongenic,nongenic -14959 upstream,1724 into,2218 into,634 into {Y56A3A.3},{Y56A3A.1a},{Y56A3A.1b.1},{Y56A3A.1b.2} 2930 CB6890_redo III 11833079 1 A C 3 1.00 63 0 0 4 4 @CCct point 0 nongenic,nongenic,nongenic,nongenic -14955 upstream,1728 into,2222 into,630 into {Y56A3A.3},{Y56A3A.1a},{Y56A3A.1b.1},{Y56A3A.1b.2} 2931 CB6890_redo III 11843627 1 A G 255 1.00 63 62 0 29 29 @gggggggGgggGgGgGGGgGGggGGGGGG point 0 nongenic,nongenic,nongenic -1843 upstream,-4407 upstream,2718 into {Y56A3A.1b.1},{Y56A3A.3},{Y56A3A.1a} 2935 CB6890_redo III 11854480 1 A C 18 1.00 63 0 0 4 4 @cccc point 0 nongenic 4098 into {Y56A3A.2} 2936 CB6890_redo III 11861725 1 A T 255 1.00 63 62 0 29 29 @TtTTTtttttTtttTTTTTTtTtTTtttt point 0 nongenic,nongenic 408 into,564 downstream {Y56A3A.2},{Y56A3A.4} 2937 CB6890_redo III 11869948 1 G A 255 1.00 63 62 0 32 32 @aaAAaaAAaaAAaAAaAAAAaaAAAaAAaaaa point 0 nongenic -785 upstream {Y56A3A.4} 2938 CB6890_redo III 11881695 1 G A 255 1.00 63 62 0 22 22 @aaaAAAaAAaAaAAAAaAaaaa point 0 nongenic,nongenic -2991 upstream,781 downstream {Y56A3A.6.1},{Y56A3A.10} 2945 CB6890_redo III 11932087 1 T A 139 1.19 63 62 15 27 42 @,AA,Aaaaa,a.AAAA,,aaaA,,a,.,.aAaaaAA,,aA,A point 0 nongenic 1435 into {Y56A3A.36} 163031 CB6890_redo III 11959121 67 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered non-exonic, 876 to 943 bp into,non-exonic, 880 to 947 bp into {Y56A3A.27.2},{Y56A3A.27.1} 163032 CB6890_redo III 11959334 49 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered non-exonic, 681 to 730 bp into,non-exonic, 685 to 734 bp into {Y56A3A.27.2},{Y56A3A.27.1} 2958 CB6890_redo III 11959463 1 A C 12 3.00 63 2 0 4 4 @CCCC point 0 nongenic,nongenic,nongenic -12562 upstream,601 into,605 into {Y56A3A.7a,Y56A3A.7b},{Y56A3A.27.2},{Y56A3A.27.1} 2990 CB6890_redo III 11995917 1 C G 12 1.00 63 10 0 4 4 @gggg point 0 nongenic,nongenic 3419 into,3559 into {Y56A3A.32.2},{Y56A3A.32.1} 2991 CB6890_redo III 11995920 1 A G 13 1.00 63 0 0 5 5 @ggggg point 0 nongenic,nongenic 3416 into,3556 into {Y56A3A.32.2},{Y56A3A.32.1} 2993 CB6890_redo III 11996049 1 G C 3 1.00 63 0 0 5 5 @CTCCC point 0 nongenic,nongenic 3287 into,3427 into {Y56A3A.32.2},{Y56A3A.32.1} 2994 CB6890_redo III 12008909 1 C G 255 3.62 63 62 0 18 18 @ggGGGgGggggggggggg point 0 nongenic,nongenic -11521 upstream,-6075 upstream {Y79H2A.1a.1},{Y56A3A.33} 2996 CB6890_redo III 12031241 1 A G 33 1.00 63 62 2 3 5 @,,ggg point 0 nongenic,nongenic,nongenic -603 upstream,-652 upstream,164 downstream {Y79H2A.2b.1},{Y79H2A.2a},{Y79H2A.3a} 2997 CB6890_redo III 12060765 1 T A 255 1.00 63 62 0 33 33 @AAAaAaaAAaaAAaAaaaAAAaAaaaAAAAAAa point 0 SNP none {haw48229} 3002 CB6890_redo III 12176926 1 G A 255 1.00 63 62 0 22 22 @aAaaAaaaAAAaaacAAaaAaa point 0 missense GCG->GTG[Ala->Val] {Y75B8A.9a,Y75B8A.9b} 3003 CB6890_redo III 12215131 1 A T 255 1.00 63 62 0 23 23 @TtTtTtTtTttTTTTTtTtTTTt point 0 SNP none {haw48426} 3004 CB6890_redo III 12239827 1 G A 141 7.69 63 62 0 10 10 @aAAAAaAAaa point 0 nongenic,nongenic,nongenic 421 downstream,457 downstream,728 downstream {Y75B8A.22.1},{Y75B8A.22.2},{Y75B8A.21} 3006 CB6890_redo III 12239848 1 A C 7 1.00 63 10 0 4 4 @cgcc point 0 nongenic,nongenic,nongenic 400 downstream,436 downstream,749 downstream {Y75B8A.22.1},{Y75B8A.22.2},{Y75B8A.21} 3011 CB6890_redo III 12280841 1 G C 29 1.00 63 26 1 4 5 @CCCC, point 0 nongenic,nongenic -7278 upstream,1263 into {Y75B8A.24},{Y75B8A.25} 3021 CB6890_redo III 12337571 1 A C 15 1.00 63 0 0 6 6 @cccccc point 0 nongenic,nongenic,nongenic 1935 into,783 into,785 into {Y75B8A.35a.1},{Y75B8A.35a.3,Y75B8A.35b},{Y75B8A.35a.2} 3028 CB6890_redo III 12344996 1 G A 255 1.00 63 62 0 28 28 @AAaaaAAaaaAaAaaaAAAaAAAAAAAa point 0 three_prime_UTR none {Y75B8A.35a.1,Y75B8A.35b} 3039 CB6890_redo III 12469226 1 A C 33 1.00 63 22 3 8 11 @.,,cccccccc point 0 nongenic,nongenic -3534 upstream,52 into {Y49E10.23a,Y49E10.23b},{Y49E10.29} 3040 CB6890_redo III 12481567 1 G A 255 1.00 63 62 0 47 47 @AAaaAaAaaaaaAaaaaAaAaaaAaAaAAaaaaAAaAaAAAAaaaaa point 0 nongenic,nongenic -3046 upstream,2954 into {Y49E10.24},{Y49E10.23a,Y49E10.23b} 3041 CB6890_redo III 12497279 1 G A 255 1.00 63 62 0 21 21 @aAaAAAaaAAaAAaAaAaaaa point 0 silent GAG->GAA[Glu->Glu] {Y111B2A.3.1,Y111B2A.3.2} 3043 CB6890_redo III 12511900 1 A G 189 3.12 63 62 0 18 18 @GGGGGGGGGGGGGGGGGG point 0 ncRNA none {Y111B2A.5b} 3044 CB6890_redo III 12573264 1 G C 241 1.81 63 62 0 26 26 @CCCCCCCCCCCCCCCCCCCCCCCCCC point 0 SNP none {haw49035} 3045 CB6890_redo III 12581006 1 G A 255 1.00 63 62 0 34 34 @aAAaaaAAaAaaaaaaaaaaaaaAaAAAaAAAAa point 0 nongenic -5757 upstream {Y111B2A.9a} 3046 CB6890_redo III 12583126 1 A G 255 1.00 63 62 0 31 31 @GgGgGgGgGgggGggggggggGggggggggg point 0 SNP none {haw49061} 3047 CB6890_redo III 12589042 1 T C 255 1.00 63 62 0 19 19 @cccCCccCcCCccCccCcC point 0 nongenic -13793 upstream {Y111B2A.9a} 3048 CB6890_redo III 12596781 1 T A 212 1.00 63 62 0 13 13 @AAAAAAAAAAAAA point 0 nongenic,nongenic,nongenic,nongenic -21532 upstream,755 into,843 into,880 into {Y111B2A.9a},{Y111B2A.10a,Y111B2A.10b.3},{Y111B2A.10b.2},{Y111B2A.10b.1} 163033 CB6890_redo III 12603657 56 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 4637 to 4693 bp into {Y111B2A.11} 3053 CB6890_redo III 12617369 1 G C 5 1.00 63 38 1 3 4 @.ccc point 0 nongenic,nongenic,nongenic -2069 upstream,-9019 upstream,575 into {Y111B2A.28},{Y111B2A.11},{Y111B2A.12} 3054 CB6890_redo III 12636079 1 T C 255 1.06 63 62 0 20 20 @ccCcCcccCCcCccccCccc point 0 nongenic,nongenic 9623 into,9628 into {Y111B2A.14.2},{Y111B2A.14.1} 3055 CB6890_redo III 12642020 1 G A 255 1.00 63 62 0 27 27 @AAAAAAaaaaaAaAaaaaAAAaaAAaA point 0 missense GAA->AAA[Glu->Lys] {Y111B2A.14.1,Y111B2A.14.2} 3057 CB6890_redo III 12656471 1 G A 255 1.00 63 62 0 28 28 @aaAAAAAAaaAAaAAaaaaaaaaaAAAa point 0 silent TCC->TCT[Ser->Ser] {Y111B2A.15} 3058 CB6890_redo III 12672378 1 A T 28 2.81 63 38 1 4 5 @TTTT. point 0 nongenic,nongenic,nongenic -10226 upstream,-1180 upstream,928 into {Y111B2A.15},{Y111B2A.17},{Y111B2A.16} 163034 CB6890_redo III 12679326 62 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 5767 to 5829 bp into {Y111B2A.17} 3061 CB6890_redo III 12680387 1 C G 3 1.50 63 18 2 4 6 @GGG.g. point 0 nongenic,nongenic -7081 upstream,5726 into {Y111B2A.16},{Y111B2A.17} 3062 CB6890_redo III 12683449 1 A C 255 1.00 63 62 0 28 28 @cCCcccCcCCCcCCcCcCCCcCCcCCCC point 0 SNP none {haw49231} 3070 CB6890_redo III 12725512 1 A T 255 1.25 63 62 0 16 16 @TTTtttTTTttTttTT point 0 nongenic,nongenic -20820 upstream,11065 into {Y111B2A.21},{Y111B2A.22} 3074 CB6890_redo III 12858535 1 G A 255 1.00 63 62 0 33 33 @AAaAAaaAAAaAaAAaAAAaaAAaaaAaAaaAA point 0 nongenic,nongenic -756 upstream,-8415 upstream {Y37D8A.6},{Y37D8A.8} 3075 CB6890_redo III 12897053 1 T G 255 1.00 63 62 1 32 33 @Gg,gGGGgGGgGGGgGgGgGGgGGGGggGGggg point 0 nongenic,nongenic -5432 upstream,-8317 upstream {Y37D8A.13},{Y37D8A.14.1} 3088 CB6890_redo III 12953211 1 T G 255 1.00 63 62 0 33 33 @gGgGGGggggggagGGgGggGgGGgGGggGggg point 0 missense,SNP AAT->ACT[Asn->Thr],none {Y39E4A.2a,Y39E4A.2b},{snp_Y39E4A[3]} 3089 CB6890_redo III 12982018 1 G A 255 1.00 63 62 0 23 23 @AAaaaaAaAaAaAAAaAAaaaAA point 0 nongenic 1044 into {ZK1010.4} 163035 CB6890_redo III 13032286 57 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 1484 to 1541 bp into {F14F7.5} 3095 CB6890_redo III 13032421 1 T C 74 2.00 63 10 0 4 4 @CcCC point 0 nongenic,nongenic,nongenic -2874 upstream,-7560 upstream,1620 into {F14F7.4},{F54F12.2a},{F14F7.5} 3096 CB6890_redo III 13032431 1 T C 104 2.50 63 62 0 5 5 @CCCCC point 0 nongenic,nongenic,nongenic -2884 upstream,-7550 upstream,1630 into {F14F7.4},{F54F12.2a},{F14F7.5} 3097 CB6890_redo III 13032541 1 G C 184 1.00 63 62 0 8 8 @CcCCcCCC point 0 nongenic,nongenic,nongenic -2994 upstream,-7440 upstream,1740 into {F14F7.4},{F54F12.2a},{F14F7.5} 3098 CB6890_redo III 13032550 1 T C 98 1.25 63 62 0 6 6 @CcCCCC point 0 nongenic,nongenic,nongenic -3003 upstream,-7431 upstream,1749 into {F14F7.4},{F54F12.2a},{F14F7.5} 3109 CB6890_redo III 13155781 1 G A 255 1.00 63 62 0 29 29 @AAAAAAAAaAAAAaAAAAAAAAaaAaaaa point 0 SNP none {haw49837} 3111 CB6890_redo III 13202983 1 G T 207 2.19 63 62 0 11 11 @TTTTtTtTtTt point 0 nongenic,nongenic,nongenic,nongenic -1880 upstream,1788 into,1790 into,1794 into {Y39E4B.11},{Y39E4B.12b},{Y39E4B.12a.1,Y39E4B.12a.2},{Y39E4B.12c} 3112 CB6890_redo III 13247353 1 G A 255 1.00 63 62 0 33 33 @AaAAAAaAAaAaaAAAaAAAaaaaaaAAAaAaa point 0 nongenic,nongenic -466 upstream,894 into {F56A8.1a},{F56A8.1b} 3113 CB6890_redo III 13264546 1 C A 255 1.44 63 62 0 16 16 @AaaaAAAAAAAAaAaA point 0 nongenic,nongenic -1206 upstream,307 into {F56A8.5},{F56A8.4} 3114 CB6890_redo III 13264548 1 T A 255 1.56 63 62 0 16 16 @aaaAAAAAAAAaAaAA point 0 nongenic,nongenic -1204 upstream,305 into {F56A8.5},{F56A8.4} 3115 CB6890_redo III 13265024 1 A T 255 1.00 63 62 1 17 18 @Ttt,tTTTtTTTTttttt point 0 nongenic,nongenic -728 upstream,171 downstream {F56A8.5},{F56A8.4} 3116 CB6890_redo III 13281779 1 A G 255 1.00 63 62 0 33 33 @gggGGGgGgGGGgGGGGgGGggTgGGGggggGg point 0 SNP none {haw49884} 3118 CB6890_redo III 13349819 1 A T 255 1.00 63 62 0 19 19 @TttttttTttttttTtttt point 0 nongenic,nongenic -1388 upstream,2853 into {F53A2.8b.1},{F53A2.8a,F53A2.8c} 3121 CB6890_redo III 13533517 1 A G 3 5.12 0 22 7 20 27 @GGG.GGGg.G.G.GGgGGG.G..GGGG point 0 nongenic,nongenic -9541 upstream,6198 into {Y76A2B.1},{Y76A2B.2} 3122 CB6890_redo III 13534442 1 G A 255 1.00 63 62 0 32 32 @AAAAaaaaaAAaaaAAAaaaaAAaAaaAaAaa point 0 nongenic,nongenic -10466 upstream,5393 into {Y76A2B.1},{Y76A2B.2} 3123 CB6890_redo III 13536222 1 T A 169 1.00 63 4 0 5 5 @AaAaa point 0 nongenic,nongenic -12246 upstream,3613 into {Y76A2B.1},{Y76A2B.2} 3124 CB6890_redo III 13536225 1 T C 4 1.00 63 62 3 5 8 @,..CccCC point 0 nongenic,nongenic -12249 upstream,3610 into {Y76A2B.1},{Y76A2B.2} 3125 CB6890_redo III 13536226 1 C A 128 1.00 63 4 0 5 5 @AaaAA point 0 nongenic,nongenic -12250 upstream,3609 into {Y76A2B.1},{Y76A2B.2} 3126 CB6890_redo III 13552614 1 G A 255 1.00 63 62 0 32 32 @aaaAaaaaAAAaAaAAaaaaAAaAaAaaaAaa point 0 silent TGC->TGT[Cys->Cys] {Y76A2B.6} 3156 CB6890_redo III 13735619 1 G A 255 1.00 63 62 0 40 40 @AaaAAaaAAAAAaAAaAAAaaAaAAAAAAAaaAAaAaaAa point 0 missense GGA->GAA[Gly->Glu] {W06F12.3} 3176 CB6890_redo III 13750753 1 T C 109 3.81 63 62 0 15 15 @CCCCCCCCCCcCCCC point 0 nongenic,nongenic -1597 upstream,-2184 upstream {K08E3.10},{K08E3.2} 3177 CB6890_redo III 13751245 1 C G 3 3.56 63 2 3 4 7 @.G,G,GG point 0 nongenic,nongenic -1105 upstream,-2676 upstream {K08E3.10},{K08E3.2} 3181 CB6890_redo IV 17659 1 A C 3 6.00 0 0 1 3 4 @.Ccc point 0 nongenic,nongenic -3833 upstream,2161 into {Y38C1AB.3},{Y38C1AB.6} 3185 CB6890_redo IV 30217 1 G C 3 2.00 0 0 3 4 7 @CCC.,C. point 0 nongenic,nongenic -3828 upstream,2164 into {Y38C1AB.7},{Y38C1AB.2} 3187 CB6890_redo IV 30220 1 C G 3 2.00 0 0 3 4 7 @,GG.GG. point 0 nongenic,nongenic -3831 upstream,2161 into {Y38C1AB.7},{Y38C1AB.2} 3192 CB6890_redo IV 93897 1 T A 142 1.00 63 0 0 4 4 @AAaA point 0 nongenic,nongenic,nongenic,nongenic -3814 upstream,-9546 upstream,1095 into,1882 into {B0545.3},{B0545.1b.1},{B0545.1b.2},{B0545.1a} 3202 CB6890_redo IV 149978 1 A G 255 1.00 63 62 0 38 38 @GGggGGgGGggGGGggGGgggGGgGggggGggGggGGg point 0 SNP none {haw50079} 3222 CB6890_redo IV 495583 1 T G 255 1.00 63 62 0 33 33 @gGGGGGGgGGGGgggGGgGgggggGgggGgaGG point 0 SNP none {haw50110} 3224 CB6890_redo IV 648773 1 T A 255 1.00 63 62 0 17 17 @aaAaAaAaaAaAaaAaA point 0 nongenic -891 upstream {K11H12.9} 3228 CB6890_redo IV 743294 1 A G 255 1.00 63 62 0 32 32 @GgGGGgGgGgGGggGgGgGGggGGGggGgGgG point 0 nongenic,nongenic -6572 upstream,1212 into {Y55F3C.3b},{Y55F3C.3a} 3229 CB6890_redo IV 757658 1 T A 255 1.00 63 62 0 27 27 @AAAaaAaAAaaaAAAAaaaaAaaAaaA point 0 missense TTC->TAC[Phe->Tyr] {Y55F3C.2} 3230 CB6890_redo IV 783851 1 G A 255 1.00 63 62 0 36 36 @AAAAAAAaAAAAAaAAAaAaAAAAAaaaaaAaAaAA point 0 silent CGG->CGA[Arg->Arg] {F56B3.7} 3231 CB6890_redo IV 786051 1 G A 89 3.75 63 62 3 6 9 @aaAAAa... point 0 nongenic,nongenic 222 downstream,231 downstream {F56B3.4a},{F56B3.4b} 3234 CB6890_redo IV 807998 1 T C 255 1.00 63 62 0 30 30 @cccCCCcCccCCCCcCCCcCCcccccCCcC point 0 SNP none {haw50174} 3235 CB6890_redo IV 862817 1 A G 5 1.00 63 26 1 5 6 @G.gcgc point 0 nongenic,nongenic -12094 upstream,3888 into {Y55F3BR.1},{Y55F3BR.2} 3237 CB6890_redo IV 969650 1 A C 23 1.00 63 4 1 7 8 @GGccc.cc point 0 nongenic,nongenic -24046 upstream,10199 into {F58H7.2},{Y55F3AL.1} 3238 CB6890_redo IV 976182 1 T C 255 1.00 63 62 0 41 41 @CcccccCcCCcccccCccccccCCccCCCCCccCCCccCCc point 0 SNP none {haw50433} 3239 CB6890_redo IV 976984 1 A G 255 1.00 63 62 0 29 29 @gGGgggggggGGGgGggggGgggGGgggg point 0 SNP none {haw50435} 3240 CB6890_redo IV 977830 1 T G 255 1.06 63 62 0 33 33 @GgggGgggggGGggGGgGGGGGgggggGggggg point 0 nongenic,nongenic -32226 upstream,6563 into {F58H7.2},{Y55F3AL.1} 3242 CB6890_redo IV 982262 1 T G 13 1.00 63 0 0 5 5 @ggggg point 0 nongenic,nongenic -36658 upstream,2131 into {F58H7.2},{Y55F3AL.1} 3243 CB6890_redo IV 982263 1 C G 3 1.00 63 0 0 5 5 @gggag point 0 nongenic,nongenic -36659 upstream,2130 into {F58H7.2},{Y55F3AL.1} 3244 CB6890_redo IV 982265 1 T G 13 1.00 63 2 0 5 5 @ggggg point 0 nongenic,nongenic -36661 upstream,2128 into {F58H7.2},{Y55F3AL.1} 3245 CB6890_redo IV 982268 1 C G 15 1.00 63 12 0 6 6 @gggggg point 0 nongenic,nongenic -36664 upstream,2125 into {F58H7.2},{Y55F3AL.1} 3246 CB6890_redo IV 991371 1 G C 255 1.00 63 62 0 30 30 @CcCcCCCCcCCcCcCcCCcccCCCCcCCcc point 0 nongenic,nongenic -917 upstream,-931 upstream {Y55F3AM.6a,Y55F3AM.6b},{Y55F3AM.7} 6675 CB6890_redo IV 1020551 0 X X -1000 -999.99 -1000 -1000 5 -1 4 @,,..g.ggg indel 0 nongenic 863 downstream {Y55F3AM.3a} 3252 CB6890_redo IV 1179321 1 G A 255 1.00 63 62 0 42 42 @AAaAAAAAAaAaAaAAaaaaAaAAAaaaaAAAAAAaAaAaAA point 0 nongenic,nongenic -3270 upstream,1300 into {Y104H12D.4},{Y104H12D.2} 3253 CB6890_redo IV 1186657 1 T C 255 1.06 63 62 0 42 42 @cCcCcCCCcccCcCCccCCcCCcCcccCcCCcCCccCCcccc point 0 nongenic,nongenic -1159 upstream,52 downstream {Y104H12D.1},{Y104H12D.4} 3260 CB6890_redo IV 1197597 1 G T 255 1.00 63 62 0 30 30 @TTTTTTTTTTTttTtTtTTttTTtTTtTTT point 0 SNP none {haw50776} 3262 CB6890_redo IV 1201163 1 G C 105 1.00 63 44 0 4 4 @ccCC point 0 nongenic 684 into {Y104H12D.3} 3267 CB6890_redo IV 1269712 1 A C 7 1.00 63 8 1 3 4 @,cCg point 0 nongenic,nongenic -6152 upstream,2847 into {C09E9.1.1},{F38A1.1} 3274 CB6890_redo IV 1386027 1 A G 255 1.00 63 62 0 10 10 @GgGGgGGGgG point 0 nongenic,nongenic -134 upstream,-9464 upstream {Y104H12A.1},{F58F6.3} 3275 CB6890_redo IV 1438459 1 A T 255 1.00 63 62 0 32 32 @tTtTTTtTTTttTttTtTTTTttTTTTTtttT point 0 missense TCC->ACC[Ser->Thr] {Y77E11A.11.1,Y77E11A.11.2} 6678 CB6890_redo IV 1439558 0 X X -1000 -999.99 -1000 -1000 5 -1 4 @,.,,,TTTT indel 0 nongenic,nongenic,nongenic,nongenic -3932 downstream,-4084 downstream,-4540 upstream,-6845 upstream {Y77E11A.11.2},{Y77E11A.11.1},{Y77E11A.10},{Y77E11A.3} 3278 CB6890_redo IV 1442160 1 C G 3 5.62 63 0 4 9 13 @,,G.gggggg.gg point 0 nongenic,nongenic,nongenic,nongenic -4242 upstream,-7142 upstream,3833 into,3867 into {Y77E11A.3},{Y77E11A.10},{Y77E11A.11.2},{Y77E11A.11.1} 3279 CB6890_redo IV 1442162 1 C G 6 4.38 63 0 2 13 15 @,Gggggggg.ggggg point 0 nongenic,nongenic,nongenic,nongenic -4240 upstream,-7144 upstream,3831 into,3865 into {Y77E11A.3},{Y77E11A.10},{Y77E11A.11.2},{Y77E11A.11.1} 3280 CB6890_redo IV 1450100 1 T A 255 1.00 63 62 0 30 30 @aAaAaAAAAaAAAAAaaaAAaAAAaaaaAa point 0 SNP none {haw51146,uCE4-558} 3291 CB6890_redo IV 1695528 1 G C 255 1.00 63 62 0 31 31 @CCCcCCCCCccccCCccCcCCCcCcCCCCCc point 0 nongenic,nongenic -13370 upstream,-4368 upstream {Y41D4B.24},{K08D12.5} 3292 CB6890_redo IV 1698822 1 A C 5 1.00 63 52 3 15 18 @.,ccccc.cccccgccct point 0 nongenic,nongenic -1074 upstream,-16664 upstream {K08D12.5},{Y41D4B.24} 6679 CB6890_redo IV 1726632 0 X X -1000 -999.99 -1000 -1000 6 -5 1 @,,,,,,TT indel 0 nongenic -2490 upstream {K08D12.7} 3293 CB6890_redo IV 1726633 1 G C 93 8.00 63 26 2 6 8 @CCCCCC,, point 0 nongenic -2491 upstream {K08D12.7} 3296 CB6890_redo IV 1763666 1 G C 12 1.00 63 30 0 4 4 @CCCC point 0 nongenic,nongenic -1982 upstream,-4952 upstream {Y41D4A.7},{Y41D4A.2} 3297 CB6890_redo IV 1812233 1 A G 6 5.62 0 4 0 31 31 @gGgCGggGgGGGGGGGgggGGgGGgGgggGg point 0 nongenic,nongenic -8252 upstream,2865 into {Y38C1BA.1},{Y38C1BA.2a,Y38C1BA.2b} 163040 CB6890_redo IV 1819004 83 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered codon 54 to codon 71 (6 % of 292 codons) {Y38C1BA.3} 3298 CB6890_redo IV 1819106 1 T G 17 1.00 63 38 1 3 4 @.GGG point 0 nongenic,nongenic,nongenic -4008 upstream,-5419 upstream,1146 into {Y38C1BA.2a,Y38C1BA.2b},{K07A9.2},{Y38C1BA.3} 3299 CB6890_redo IV 1878982 1 T A 255 1.00 63 62 0 17 17 @aAAaaAaAAaAaaAaAA point 0 nongenic,nongenic,nongenic,nongenic -23339 upstream,1580 into,1605 into,957 into {F55A8.1.1},{F55A8.2a.2},{F55A8.2a.1},{F55A8.2b,F55A8.2c,F55A8.2d,F55A8.2e,F55A8.2f} 3300 CB6890_redo IV 1901803 1 T A 255 1.00 63 62 0 28 28 @AAaaAAaaAAaAaAAaAaAAAaaaAAAa point 0 nongenic -518 upstream {F55A8.1.1} 3302 CB6890_redo IV 1917013 1 A C 255 1.00 63 62 0 13 13 @cCcccCcccCCCC point 0 SNP none {haw51958} 163041 CB6890_redo IV 1932179 137 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 8609 to 8746 bp into {F52C12.4} 163042 CB6890_redo IV 1932368 88 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 8798 to 8886 bp into {F52C12.4} 163043 CB6890_redo IV 1932508 62 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 8938 to 9000 bp into {F52C12.4} 163044 CB6890_redo IV 1951226 58 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3029 to 3087 bp into {F52C12.3} 6680 CB6890_redo IV 1968541 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @.T,,.c. indel 5 nongenic,nongenic -1085 downstream,-1197 upstream {Y48A5A.1},{Y48A5A.3} 3309 CB6890_redo IV 1999504 1 C T 255 1.00 63 62 0 43 43 @TtTTTTTtttTTttTTtttTtttTtttTTTttTttTttttTtT point 0 silent CCC->CCT[Pro->Pro] {Y76B12C.2} 3320 CB6890_redo IV 2106939 1 A C 20 1.00 63 62 1 3 4 @GCC, point 0 nongenic,nongenic -7049 upstream,2885 into {C23H5.11},{C23H5.7} 3321 CB6890_redo IV 2106988 1 T C 115 1.00 63 62 9 19 28 @CC.,,ccc,C.c.cccccccc,cccC,, point 0 nongenic,nongenic -7098 upstream,2934 into {C23H5.11},{C23H5.7} 3322 CB6890_redo IV 2170192 1 T G 12 1.00 63 0 0 4 4 @GGGG point 0 nongenic,nongenic -5322 upstream,-5412 upstream {C54E4.4},{C54E4.1} 3327 CB6890_redo IV 2226862 1 T C 255 1.44 63 62 0 22 22 @cccCCcCCcCCcCccccccCCC point 0 nongenic,nongenic 4034 into,4036 into {T04C4.1a,T04C4.1b.2},{T04C4.1b.1} 3332 CB6890_redo IV 2357212 1 G T 219 1.00 63 62 0 12 12 @tttttttttttt point 0 SNP none {haw52736} 3333 CB6890_redo IV 2359440 1 A G 255 1.00 63 62 0 33 33 @gggGGgGGggggGGGGggGgGggGGgggggggG point 0 SNP none {haw52752} 3334 CB6890_redo IV 2365373 1 T A 88 1.31 63 62 6 9 15 @,....,aAAaAAaaA point 0 nongenic,nongenic -13089 upstream,6444 into {Y38F2AR.13},{Y38F2AR.5} 3335 CB6890_redo IV 2365375 1 A T 184 1.44 63 62 2 11 13 @..CtTTtTTttTt point 0 nongenic,nongenic -13087 upstream,6446 into {Y38F2AR.13},{Y38F2AR.5} 3337 CB6890_redo IV 2373373 1 T C 246 2.00 63 62 0 14 14 @cccCCcccccCCCC point 0 nongenic,nongenic -5089 upstream,2742 into {Y38F2AR.13},{Y38F2AR.5} 3339 CB6890_redo IV 2374663 1 A C 104 1.56 63 62 4 5 9 @....CCCCC point 0 nongenic,nongenic -3799 upstream,1452 into {Y38F2AR.13},{Y38F2AR.5} 3340 CB6890_redo IV 2374666 1 T G 103 1.25 63 62 3 5 8 @...GGGGG point 0 nongenic,nongenic -3796 upstream,1449 into {Y38F2AR.13},{Y38F2AR.5} 3341 CB6890_redo IV 2502956 1 A G 113 2.44 63 62 0 30 30 @gGgGggGGgggGGGGgggGggggGgGgGGg point 0 nongenic,nongenic -1368 upstream,905 downstream {Y69A2AR.16},{Y69A2AR.17} 3343 CB6890_redo IV 2519843 1 T A 101 1.00 63 62 0 4 4 @AAaA point 0 nongenic,nongenic,nongenic -11931 upstream,-22479 upstream,10444 into {Y69A2AR.22},{Y69A2AR.15},{Y69A2AR.16} 3344 CB6890_redo IV 2519844 1 T A 98 1.00 63 62 0 5 5 @AAaAA point 0 nongenic,nongenic,nongenic -11932 upstream,-22478 upstream,10443 into {Y69A2AR.22},{Y69A2AR.15},{Y69A2AR.16} 3345 CB6890_redo IV 2544993 1 A T 255 1.00 63 62 0 29 29 @tTTTTtttTTtTtTTTTttTtTTTttTtt point 0 nongenic 2671 into {Y69A2AR.15} 3346 CB6890_redo IV 2614797 1 T A 65 1.00 63 62 5 8 13 @AAaaaAaA,,,., point 0 nongenic,nongenic,nongenic -1736 upstream,-4132 upstream,601 into {Y69A2AR.28},{Y69A2AR.4},{Y69A2AR.5} 3347 CB6890_redo IV 2664348 1 C A 255 1.00 63 62 0 28 28 @aAaaaaaaAAaaAaAaAaAAAAAaAAAA point 0 nongenic,nongenic -2698 upstream,222 into {Y69A2AR.1b,Y69A2AR.1d},{Y69A2AR.31} 3348 CB6890_redo IV 2679371 1 A G 3 1.00 63 62 2 2 4 @,,GG point 0 nongenic,nongenic 911 downstream,924 downstream {Y94H6A.11},{Y94H6A.3} 3349 CB6890_redo IV 2713374 1 T C 3 1.00 63 2 3 4 7 @CC,.CC. point 0 nongenic,nongenic,nongenic -339 upstream,-341 upstream,651 downstream {Y94H6A.12.1},{Y94H6A.12.2},{Y94H6A.7} 3350 CB6890_redo IV 2731198 1 A G 255 1.00 63 62 0 30 30 @GGGgGgGGgGgGGGGGGgGgGGGggggggG point 0 silent CAA->CAG[Gln->Gln] {Y94H6A.2} 3352 CB6890_redo IV 2905125 1 A G 204 4.06 63 62 0 11 11 @ggggggggggg point 0 nongenic,nongenic -13604 upstream,2782 into {Y54G2A.50},{Y54G2A.21} 3353 CB6890_redo IV 2923761 1 T G 255 1.00 63 62 0 26 26 @ggGgGGgggGGGgGGGGGGGGGGGgG point 0 nongenic,nongenic -1534 upstream,1164 into {Y54G2A.22},{Y54G2A.31} 3360 CB6890_redo IV 2993378 1 T C 3 1.00 63 62 3 3 6 @CCC... point 0 nongenic,nongenic,nongenic -869 upstream,2193 into,2194 into {Y54G2A.26b.1},{Y54G2A.26b.2},{Y54G2A.26a} 3361 CB6890_redo IV 2998321 1 G A 255 1.19 63 62 0 17 17 @AAAAAAAAaaaAaAAAA point 0 nongenic,nongenic -2749 upstream,552 downstream {Y54G2A.26a},{Y54G2A.27} 3362 CB6890_redo IV 2999123 1 A G 206 1.00 63 62 0 11 11 @GGGGGGGgGGG point 0 silent CCT->CCC[Pro->Pro] {Y54G2A.27} 3373 CB6890_redo IV 3331639 1 T A 255 1.12 63 62 0 28 28 @AAaAAAAAAAAAAAAaaAaAaAAAAaAA point 0 nongenic,nongenic -1997 upstream,149 into {F42A6.4},{F42A6.5} 3385 CB6890_redo IV 3386151 1 C A 255 1.00 63 62 0 22 22 @aaAAAAaaAAaAAaaaaaAaAA point 0 missense CTC->ATC[Leu->Ile] {B0546.1.1,B0546.1.2} 3386 CB6890_redo IV 3455533 1 C T 3 5.31 0 20 3 5 8 @..T,TTTT point 0 nongenic,nongenic -7964 upstream,747 downstream {F58E2.4},{F58E2.9} 3392 CB6890_redo IV 3525903 1 T A 237 1.00 63 62 0 17 17 @aaaaaaaaaaaaaaaaA point 0 three_prime_UTR none {Y37E11C.1} 3393 CB6890_redo IV 3831278 1 T C 30 1.00 63 62 3 4 7 @CCCc... point 0 nongenic,nongenic,nongenic,nongenic -11959 upstream,-8435 upstream,1738 into,4412 into {M02B7.5},{F28F9.2},{M02B7.6},{F28F9.3} 3395 CB6890_redo IV 3864660 1 G C 46 1.00 63 28 0 5 5 @CCCCC point 0 nongenic,nongenic -2566 upstream,365 into {F37C4.4b.2},{F28F9.4} 3396 CB6890_redo IV 3864661 1 A C 43 1.00 63 22 0 4 4 @CCCC point 0 nongenic,nongenic -2565 upstream,364 into {F37C4.4b.2},{F28F9.4} 3414 CB6890_redo IV 4166340 1 A T 255 1.00 63 62 0 38 38 @TtttttTtTtttTttTTTTttTttTTTtTtTTTtTtTT point 0 nongenic,nongenic -1690 upstream,170 downstream {K08D10.5},{K08D10.7.1,K08D10.7.2} 3415 CB6890_redo IV 4166954 1 C A 43 3.88 60 62 6 6 12 @aaa,AA,G,,.. point 0 nongenic,nongenic -1076 upstream,784 downstream {K08D10.5},{K08D10.7.1,K08D10.7.2} 3417 CB6890_redo IV 4324719 1 G C 6 5.00 63 0 1 9 10 @ACCCC.cccc point 0 nongenic -1989 upstream {W03B1.2} 3427 CB6890_redo IV 4514631 1 A C 19 1.00 63 2 0 5 5 @ccccc point 0 nongenic,nongenic,nongenic -1316 upstream,414 downstream,417 downstream {ZK180.4},{ZK180.5c},{ZK180.5a,ZK180.5b} 6693 CB6890_redo IV 4583605 0 X X -1000 -999.99 -1000 -1000 5 -1 4 @,..,.gGgg indel 0 five_prime_UTR none {F28E10.1d} 3432 CB6890_redo IV 4821642 1 A G 157 1.00 63 62 2 7 9 @,,gGGgGgg point 0 nongenic,nongenic -520 upstream,-577 upstream {H06H21.8a},{H06H21.8b} 3435 CB6890_redo IV 4898826 1 G C 13 1.00 63 2 0 5 5 @CCCCC point 0 nongenic -2006 upstream {T08B6.2} 3444 CB6890_redo IV 4931163 1 A C 255 1.00 63 62 0 30 30 @CCcccCccccccccCccCccccCccCcccc point 0 missense,SNP AAC->CAC[Asn->His],none {Y9C9A.8},{haw56120,snp_Y9C9A[1]} 3446 CB6890_redo IV 4972666 1 C T 255 1.00 63 62 0 33 33 @ttttTTTTTtTTTTTTTTtttTTtTTTTTtTTt point 0 missense,SNP GTT->ATT[Val->Ile],none {Y9C9A.15},{haw56128} 3452 CB6890_redo IV 5030802 1 C A 255 1.00 63 62 0 27 27 @aAAAAaAAaaaaAaAAAAAaaaAAAAA point 0 missense CCA->ACA[Pro->Thr] {C09B9.2} 3454 CB6890_redo IV 5308471 1 A C 255 1.00 63 62 0 22 22 @CCCcCCCCcCCcccCccCCCCc point 0 nongenic,nongenic -1751 upstream,-99 upstream {ZK354.3},{ZK354.9} 3455 CB6890_redo IV 5366827 1 A T 255 1.00 63 62 0 30 30 @tttttTTttTTtTTtTTtttTtTTTTTttT point 0 nongenic,nongenic,nongenic -28 upstream,257 downstream,83 downstream {F41H10.11},{F41H10.4.2},{F41H10.4.1} 3456 CB6890_redo IV 5426794 1 G T 255 1.00 63 62 0 35 35 @ttTTTttTTTTtTTTtTTTTtttTttTtTTTTTTT point 0 SNP none {haw56297} 3457 CB6890_redo IV 5431213 1 T G 15 1.88 63 2 0 7 7 @GGGGGGG point 0 nongenic,nongenic -12030 upstream,-7778 upstream {ZK616.10a},{Y4C6A.2b} 3460 CB6890_redo IV 5494118 1 C T 255 1.00 63 62 0 23 23 @TTttTtTttTtTTTttTTTttTt point 0 nongenic 137 into {B0273.1} 3461 CB6890_redo IV 5516506 1 T C 44 1.00 63 62 4 6 10 @,.,,cCCcCc point 0 nongenic -253 upstream {B0273.4a,B0273.4b} 3467 CB6890_redo IV 6023662 1 G A 255 1.00 63 62 0 36 36 @AaaaAaAAaaaAaAaaAAaAAaaAAaAAaAAAAAaa point 0 nongenic,nongenic,nongenic -30119 upstream,3702 into,3848 into {H16O14.2a,H16O14.2b},{C46G7.4a,C46G7.4c},{C46G7.4b} 3468 CB6890_redo IV 6096709 1 G A 255 1.00 63 62 0 35 35 @aAaaAaAAaaAAaaAAAaAaAaaAaAaAaaaAaaa point 0 nongenic,nongenic,nongenic -3077 upstream,1314 into,1315 into {K08B4.6},{K08B4.1b},{K08B4.1a} 3483 CB6890_redo IV 6359838 1 A G 37 6.94 63 62 22 29 51 @,GGGGG..G.GGGG.GGg..,GGGG,G,g,G,g,G,GGgG,g,,Gg,,,,, point 0 nongenic,nongenic -12374 upstream,-2201 upstream {Y73B6BL.16},{Y73B6BL.47} 3505 CB6890_redo IV 6979576 1 C T 255 1.00 63 62 0 35 35 @tttTTtTTTTTTTTTtttTttTtTTttTTttTTtt point 0 nongenic,nongenic,nongenic,nongenic -20006 upstream,565 into,648 downstream,818 into {C25A8.5},{ZK381.5a},{ZK381.1},{ZK381.5b} 3510 CB6890_redo IV 7056612 1 A G 255 1.00 63 62 0 25 25 @gGgGGggGGgGGGGgGgGGGGgGGG point 0 SNP none {haw57660} 3531 CB6890_redo IV 7226681 1 C T 29 1.00 63 62 2 3 5 @,,tTt point 0 nongenic,nongenic,nongenic -74 upstream,585 downstream,586 downstream {R13A1.10},{D2024.5b.1},{D2024.5a.1} 3533 CB6890_redo IV 7259547 1 C T 255 1.00 63 62 0 26 26 @ttttttTtTTtTTttttTtTtTttTT point 0 nongenic,nongenic -1321 upstream,25 downstream {C06E4.3},{C06E4.4} 3535 CB6890_redo IV 7319862 1 C T 255 1.00 63 62 0 31 31 @tttTttttTttTTttTTTtTttTTtttTTtt point 0 nongenic,nongenic -2714 upstream,859 downstream {F42C5.9.1},{F42C5.10} 3537 CB6890_redo IV 7527069 1 T G 255 1.00 63 62 0 27 27 @GgGGgGGgGgGggGGGGggGgGGgggg point 0 SNP none {haw57987} 3538 CB6890_redo IV 7591627 1 A C 111 8.56 63 62 5 20 25 @CcCCcCcccCcCCccccccc,,,,, point 0 missense GAA->GAC[Glu->Asp] {Y2C2A.1} 3549 CB6890_redo IV 7596529 1 G C 110 1.00 34 62 0 14 14 @cccccccccccccc point 0 nongenic,nongenic -9935 upstream,5985 into {F45E4.4},{Y2C2A.1} 3550 CB6890_redo IV 7596545 1 T A 136 1.00 34 62 0 16 16 @aaaaaaaaaaaaaaaa point 0 nongenic,nongenic -9919 upstream,6001 into {F45E4.4},{Y2C2A.1} 3551 CB6890_redo IV 7596564 1 G T 106 1.00 34 62 0 7 7 @ttttttt point 0 nongenic,nongenic -9900 upstream,6020 into {F45E4.4},{Y2C2A.1} 3553 CB6890_redo IV 7597178 1 T A 26 4.75 0 24 0 12 12 @AAaaAAaAAaaA point 0 nongenic,nongenic -9286 upstream,6634 into {F45E4.4},{Y2C2A.1} 163047 CB6890_redo IV 7598920 74 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered codon 2626 to codon 2631 (0 % of 4901 codons) {Y2C2A.1} 3564 CB6890_redo IV 7599654 1 T A 158 9.69 63 62 9 13 22 @,A.AAAAAA.AA.A,,,.a.Aa point 0 missense,SNP GAT->GAA[Asp->Glu],none {Y2C2A.1},{uCE4-1005} 3568 CB6890_redo IV 7600485 1 A T 255 1.00 63 62 0 37 37 @TTTttTtTtTTtTtTtTTTtTttTTTTtTTtttttTT point 0 missense,SNP CAA->CAT[Gln->His],none {Y2C2A.1},{haw58035} 3569 CB6890_redo IV 7607350 1 A G 224 2.25 63 62 0 19 19 @gGGGGGGgGGGGGGGGGGG point 0 nongenic,nongenic -12263 upstream,886 into {F45E4.3b.1},{F45E4.4} 3570 CB6890_redo IV 7607351 1 A G 223 2.25 63 62 0 19 19 @gGGGGGGgGGGGGGGGGGG point 0 nongenic,nongenic -12262 upstream,887 into {F45E4.3b.1},{F45E4.4} 3571 CB6890_redo IV 7607353 1 A G 225 2.25 63 62 0 19 19 @gGGGGGGgGGGGGGGGGGG point 0 nongenic,nongenic -12260 upstream,889 into {F45E4.3b.1},{F45E4.4} 3573 CB6890_redo IV 7709027 1 C T 255 1.00 63 62 0 36 36 @TtTTTtTTtttTTtTTTtTttttttTttTtttttTt point 0 missense AGT->AAT[Ser->Asn] {F33D4.5.1,F33D4.5.2} 3574 CB6890_redo IV 7725116 1 C T 255 1.00 63 62 0 23 23 @TTtttTTtTTttttTttTTtttt point 0 nongenic,nongenic -1585 upstream,-1932 upstream {C50F7.5.1},{C50F7.6} 3575 CB6890_redo IV 7726421 1 C T 255 1.00 63 62 0 31 31 @TTTTtTTTTtTttTttTTTTTTTttTTtttt point 0 nongenic,nongenic,nongenic -280 upstream,-281 upstream,-3237 upstream {C50F7.5.1},{C50F7.5.2},{C50F7.6} 3577 CB6890_redo IV 7727541 1 C A 9 1.00 63 6 2 2 4 @,A.A point 0 missense CCA->CAA[Pro->Gln] {C50F7.5.1,C50F7.5.2} 3578 CB6890_redo IV 7727542 1 A G 14 1.00 63 6 1 3 4 @,GgG point 0 silent CCA->CCG[Pro->Pro] {C50F7.5.1,C50F7.5.2} 3579 CB6890_redo IV 7919748 1 C T 255 1.00 63 62 0 44 44 @ttTtTtTtttTtTTTtTTttTTTtTttTTtTtTTTTTtTttTTT point 0 nongenic,nongenic -4584 upstream,3067 into {C49H3.3.1},{C49H3.10} 3580 CB6890_redo IV 7965990 1 A T 255 1.00 63 62 0 35 35 @TtTtttttttTtTTTTttTTTTtTTTTttTTTTTt point 0 SNP none {haw58207} 3581 CB6890_redo IV 7980953 1 C T 255 1.00 63 62 0 27 27 @TtttttTTTtTtTTTtTtTttTtTtTt point 0 premature_stop CAG->TAG[Gln->stop] {F57H12.2} 3582 CB6890_redo IV 8007299 1 A G 92 1.00 63 62 2 5 7 @,,gGGGg point 0 nongenic -3194 upstream {Y42H9B.2} 3583 CB6890_redo IV 8012779 1 C A 211 1.00 63 62 0 9 9 @AAaaAAAAa point 0 nongenic,nongenic -1330 upstream,-366 upstream {C26B2.8},{Y42H9B.3} 6710 CB6890_redo IV 8061990 0 X X -1000 -999.99 -1000 -1000 5 -1 4 @,,.,.CCCc indel 0 nongenic -660 upstream {C18F3.2b,C18F3.2c} 3588 CB6890_redo IV 8071902 1 T C 15 1.00 63 0 0 6 6 @CCCCCC point 0 nongenic,nongenic,nongenic 4820 into,5000 into,9253 into {C18F3.2a},{C18F3.2d},{C18F3.2b,C18F3.2c} 6711 CB6890_redo IV 8087154 0 X X -1000 -999.99 -1000 -1000 5 -2 3 @,,,,,Aa indel 0 nongenic,nongenic -12745 upstream,-520 upstream {Y42H9AR.2},{C18F3.4} 3591 CB6890_redo IV 8087155 1 G A 27 1.00 63 62 2 5 7 @AAAAA,. point 0 nongenic,nongenic -12743 upstream,-521 upstream {Y42H9AR.2},{C18F3.4} 3592 CB6890_redo IV 8233931 1 A T 255 1.00 63 62 0 26 26 @tTtTtttTTTTttTTTTtTttttttt point 0 nongenic,nongenic,nongenic,nongenic -10480 upstream,-2113 upstream,2254 into,2653 into {T09A12.1},{T09A12.4a.1},{T09A12.4a.3,T09A12.4d.2},{T09A12.4a.2,T09A12.4c,T09A12.4d.1} 3593 CB6890_redo IV 8244794 1 G A 255 1.00 63 62 0 28 28 @aaaAaAaaaaAAAaAaaaAaaaAAaAAa point 0 nongenic,nongenic,nongenic -14003 upstream,-8210 upstream,383 into {H09I01.1},{T09A12.4a.2,T09A12.4c,T09A12.4d.1},{T09A12.1} 3597 CB6890_redo IV 8374859 1 G T 84 1.50 63 40 0 4 4 @TTtT point 0 nongenic,nongenic,nongenic,nongenic -5654 upstream,471 into,495 into,855 downstream {D2096.6},{D2096.3.3},{D2096.3.1,D2096.3.2},{D2096.7b} 6713 CB6890_redo IV 8412360 0 X X -1000 -999.99 -1000 -1000 4 -3 1 @,,,c,c indel 4 nongenic 424 downstream {M116.1} 3602 CB6890_redo IV 8422635 1 A G 255 1.00 63 62 0 21 21 @GggGgGGGGGGGggGggggGG point 0 nongenic -1589 upstream {M116.5} 3606 CB6890_redo IV 8468403 1 C T 255 2.94 63 62 0 26 26 @TTTTTTTTTtTTTttTttTTTtTTTT point 0 nongenic,nongenic,nongenic,nongenic -5677 upstream,-8143 upstream,3570 into,3654 into {C28C12.11b},{T01B11.4},{T01B11.7.2},{T01B11.7.1} 3625 CB6890_redo IV 8565269 1 G C 12 1.00 63 0 0 4 4 @CCCC point 0 nongenic,nongenic -1895 upstream,-689 upstream {Y59H11AM.2},{Y59H11AM.3} 3627 CB6890_redo IV 8566666 1 A C 13 6.56 0 12 0 17 17 @CCCCCCCCCCCCCCCCC point 0 nongenic,nongenic -2086 upstream,-498 upstream {Y59H11AM.3},{Y59H11AM.2} 3628 CB6890_redo IV 8566667 1 G C 13 6.56 0 12 0 17 17 @CCCCCCCCCCCCCCCCC point 0 nongenic,nongenic -2087 upstream,-497 upstream {Y59H11AM.3},{Y59H11AM.2} 3646 CB6890_redo IV 8575147 1 A C 10 7.38 0 8 0 65 65 @CCCCCCCCCcCCCCCCCCCCCCcCCCCCCCcCCCCCCCCCCCCCcCCccCcCCCCCCCcCcCcCc point 0 nongenic -10376 upstream {Y59H11AR.2a.2} 3648 CB6890_redo IV 8575950 1 G T 18 8.81 0 2 0 6 6 @ttTTTT point 0 nongenic -9573 upstream {Y59H11AR.2a.2} 3665 CB6890_redo IV 8602902 1 C A 255 1.00 63 62 0 38 38 @AAaaaAaAAAaAAaaAAAAAaaaAaAAAaaaaAAAAaa point 0 SNP none {haw58423} 3666 CB6890_redo IV 8602934 1 C A 255 1.00 63 62 0 43 43 @AaAAAaaaaAAAAaaAAaAaAaAAAAaAAAaAAaAAaAaAAAA point 0 SNP none {haw58424} 3667 CB6890_redo IV 8615641 1 G A 255 1.00 63 62 0 29 29 @aAaAAaaaAaAAAAaaAaaaAAaAAAAaA point 0 missense GTT->ATT[Val->Ile] {F42A9.4} 3670 CB6890_redo IV 8679368 1 A T 255 1.00 63 62 0 31 31 @TtTTTttTTttTtttTTTtTTttTTtttttt point 0 nongenic -79 upstream {F08B4.4} 3671 CB6890_redo IV 8879214 1 G A 255 1.00 63 62 0 38 38 @AAAaaaAaaAaaAaaaaAaAAAAAaaaaaaaaAaaAaa point 0 missense ACT->ATT[Thr->Ile] {C09G9.7} 3680 CB6890_redo IV 8966627 1 G A 4 1.00 63 6 6 7 13 @,.,,.,AaAAaAa point 0 SNP none {haw58534} 3681 CB6890_redo IV 9038439 1 G A 255 1.00 63 62 0 41 41 @AAAAAAAaaaaAAAAAaAaaaaaaaaAAAAAAaaAaAAaAa point 0 SNP none {haw58542} 3686 CB6890_redo IV 9048098 1 G C 117 7.12 63 62 33 36 69 @,.C.CC......C.......C.....,...c.c..CC..cCc.CC..cCCCccCCCcccccCCccCCcC point 0 nongenic,nongenic -21891 upstream,-2765 upstream {ZC410.1a},{Y73F4A.1} 3687 CB6890_redo IV 9048306 1 A G 255 5.19 63 62 30 225 255 @GGGGGGGGGGGgggggggGGGGGGGGGGgGGGGGGGGGGGGgGGGGGGGGGGGGGGGGGGGGGGGGgggggGGGGGGGGGGGGGGGGGGGGGGGGGGGg point 0 SNP none {haw58549} 3688 CB6890_redo IV 9048788 1 C G 147 7.75 63 62 0 11 11 @ggggggggGGG point 0 nongenic,nongenic -21201 upstream,-3455 upstream {ZC410.1a},{Y73F4A.1} 3689 CB6890_redo IV 9048807 1 C G 244 1.00 63 62 0 18 18 @ggGGGGGGGggGaGGGGg point 0 nongenic,nongenic -21182 upstream,-3474 upstream {ZC410.1a},{Y73F4A.1} 3690 CB6890_redo IV 9048812 1 T A 184 1.00 63 62 0 19 19 @AAAAAAAagAgAAAAaAgA point 0 nongenic,nongenic -21177 upstream,-3479 upstream {ZC410.1a},{Y73F4A.1} 3693 CB6890_redo IV 9073450 1 G A 255 1.00 63 62 0 33 33 @aaAaaaAAaaAAaAaaaAAAaAaaAaaaAAAaa point 0 missense,ncRNA GTT->ATT[Val->Ile],none {ZC410.1a,ZC410.1b},{ZC410.1c} 3694 CB6890_redo IV 9155021 1 A T 202 1.00 63 32 1 8 9 @tttt.TTTT point 0 SNP none {haw58572} 3696 CB6890_redo IV 9195666 1 C G 31 2.00 63 30 0 4 4 @GGgg point 0 silent CGC->CGG[Arg->Arg] {C46C2.7} 3697 CB6890_redo IV 9195667 1 G C 31 2.00 63 30 0 4 4 @CCcc point 0 missense GAA->CAA[Glu->Gln] {C46C2.7} 3698 CB6890_redo IV 9251676 1 C T 27 1.00 63 44 3 4 7 @,.,TtTT point 0 nongenic,nongenic 350 into,836 downstream {Y11D7A.8},{Y11D7A.7} 3699 CB6890_redo IV 9269038 1 T C 255 1.00 63 62 0 24 24 @ccccCCCCCCCcccccccCCCCCc point 0 nongenic,nongenic -1035 upstream,-2498 upstream {Y11D7A.13},{Y11D7A.19} 3700 CB6890_redo IV 9411238 1 C T 12 3.69 0 2 0 4 4 @TTTT point 0 nongenic,nongenic -3156 upstream,1393 into {F56D5.5},{F56D5.6} 3701 CB6890_redo IV 9476338 1 G A 255 1.00 63 62 0 25 25 @AAAAAaaAAAAaaaaAaaaAaaAAA point 0 nongenic,nongenic -8842 upstream,499 into {F38E11.6a,F38E11.6b},{F38E11.7} 3702 CB6890_redo IV 9510681 1 G A 255 1.00 63 62 0 24 24 @aAAaAAaAAaaAaaaaaaaAaaaa point 0 nongenic,nongenic,nongenic -109 upstream,422 downstream,43 downstream {C33A12.4},{C33A12.3.2},{C33A12.3.1} 3703 CB6890_redo IV 9519172 1 G A 255 1.00 63 62 0 36 36 @AAAAaAaaaAaaaAAAAAAAAaaaaAaAAaAaAaaA point 0 nongenic,nongenic -267 upstream,784 downstream {C33A12.2},{C33A12.19} 3708 CB6890_redo IV 9745669 1 G A 255 1.56 63 62 0 30 30 @AaaaaaAaaAaAaaAaAAAAAAAAAAAAAa point 0 missense CAC->TAC[His->Tyr] {C28D4.5} 3709 CB6890_redo IV 9764971 1 G C 37 4.12 63 62 0 7 7 @TTTCCCC point 0 nongenic,nongenic 506 downstream,676 downstream {H27C11.1a},{T13F2.12} 3711 CB6890_redo IV 9949575 1 G A 255 1.00 63 62 0 22 22 @AaaaaAaaaaAaaaaaAaaaaA point 0 nongenic,nongenic -14663 upstream,-3827 upstream {T13H10.2},{F25H8.3} 6724 CB6890_redo IV 10112497 3 X X -1000 -999.99 -1000 -1000 10 -7 3 @,,,,,,,,.. indel -3 SNP none {uCE4-1092} 3726 CB6890_redo IV 10199841 1 G A 255 1.00 63 62 0 31 31 @aaAaaaaaaaAAaAaAAaaaaaaaaaAaaAa point 0 missense GGG->GAG[Gly->Glu] {K04D7.5a,K04D7.5b} 3731 CB6890_redo IV 10425279 1 G A 128 1.00 63 48 0 5 5 @AAaAA point 0 SNP none {uCE4-1111} 3732 CB6890_redo IV 10425280 1 A T 49 1.00 63 62 3 4 7 @TtTT,.. point 0 nongenic,nongenic,nongenic -670 upstream,-672 upstream,930 downstream {F13B12.1.1},{F13B12.1.2},{F13B12.2} 3733 CB6890_redo IV 10425373 1 T G 14 1.00 63 62 1 3 4 @GGG, point 0 nongenic,nongenic,nongenic -763 upstream,-765 upstream,837 downstream {F13B12.1.1},{F13B12.1.2},{F13B12.2} 3735 CB6890_redo IV 10878679 1 G A 255 1.00 63 62 0 30 30 @AaaaAaaaaAAaaaaAAaAaaaaAAaaaaA point 0 missense,SNP CGT->TGT[Arg->Cys],none {F13E9.6},{haw59179} 3736 CB6890_redo IV 10894242 1 A C 19 1.00 63 30 1 3 4 @ccc. point 0 silent GGT->GGG[Gly->Gly] {F13E9.8} 3739 CB6890_redo IV 10949985 1 C T 25 1.00 63 62 23 34 57 @,,..TT.Ttt.TT,TT.T.,T,,tTT.,.TTTTTTTT,.TTTT,t.Tt.Tt.,tT,t point 0 silent CAC->CAT[His->His] {Y69E1A.2} 3740 CB6890_redo IV 10950263 1 A C 61 1.25 63 60 31 49 80 @cC.,.,c.CcC...cCC.,CCC,,c,Ccc.Ccc.ccccC,CCcc.cCCc,,c,C,Cc,C,cc,C.c,,.CcccCCC.,c, point 0 missense,SNP AAG->ACG[Lys->Thr],none {Y69E1A.2},{uCE4-1129} 3741 CB6890_redo IV 10950264 1 G A 61 1.25 63 60 31 48 79 @A.,.,a.AaA...aAA.,AAA,,a,Aaa.Aaa.aaaaA,AAaa.aAAa,,a,A,Aa,A,aa,A.a,,.AaaaAAA.,a, point 0 silent,SNP AAG->AAA[Lys->Lys],none {Y69E1A.2},{uCE4-1130} 3744 CB6890_redo IV 10998790 1 T G 3 1.88 63 6 1 7 8 @CC,gggcg point 0 nongenic -3298 upstream {F13H10.9} 3747 CB6890_redo IV 11002683 1 T C 27 6.31 63 62 6 6 12 @,,,,,,cCcccc point 0 nongenic,nongenic -1871 upstream,595 into {F13H10.1},{F13H10.9} 3748 CB6890_redo IV 11009137 1 G A 255 1.00 63 62 0 40 40 @AAAAAaaAaAaaAAaAAaAAaaaAaAaAaaAaAAAaAAaa point 0 nongenic,nongenic -126 upstream,862 downstream {F13H10.6},{F13H10.2a} 3753 CB6890_redo IV 11071114 1 C T 142 2.12 63 62 408 -153 255 @TTTTTTTTTTTTTTTTTTTTT.tttTTTTTT,TT,TTT,T,,TTT,TTTT,tttt.T,TTT,TTTTTTTTTTT,,TTTT,TTTT,TTTTTt.ttttt.T point 0 nongenic 884 downstream {Y5F2A.3} 3754 CB6890_redo IV 11071123 1 T C 255 1.19 63 62 1 254 255 @CCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCC point 0 SNP none {haw59203} 3755 CB6890_redo IV 11071124 1 T A 110 1.19 63 62 251 4 255 @A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,..,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,.............,,,,,,,,,,,,,,,,,,,, point 0 nongenic 894 downstream {Y5F2A.3} 3788 CB6890_redo IV 11180495 1 A G 255 1.00 63 62 0 34 34 @GgggggGggcGggGgggGGggggGggGggggGgg point 0 missense,SNP ATT->GTT[Ile->Val],none {R07H5.2a.1,R07H5.2a.2,R07H5.2b},{haw59219} 3797 CB6890_redo IV 11226241 1 A C 204 2.25 63 62 0 18 18 @CcCCCCCCCCCCcCCCCg point 0 missense CAA->CCA[Gln->Pro] {C29F4.1} 3798 CB6890_redo IV 11254473 1 G A 255 1.56 63 62 0 27 27 @AAaAaaAAAaAAAaaaaaaaaAaaaAA point 0 nongenic,nongenic,nongenic,splice_acceptor -6450 upstream,4963 into,519 into,none {C05C12.4},{C05C12.3},{C05C12.1},{C05C12.1} 3799 CB6890_redo IV 11323988 1 C G 19 1.00 63 24 0 5 5 @GGGGG point 0 three_prime_UTR none {B0035.7} 3800 CB6890_redo IV 11331335 1 G A 255 1.00 63 62 0 35 35 @AAaaaAAAAaAAaaAaaAAaaAaAaAAAAAAaaaA point 0 missense ACT->ATT[Thr->Ile] {B0035.12.1,B0035.12.2} 3802 CB6890_redo IV 11370096 1 A G 3 2.25 63 0 1 3 4 @GG,g point 0 nongenic,nongenic,nongenic -2864 upstream,-8616 upstream,1667 into {H02I12.1},{T01G1.4},{T01G1.3} 3803 CB6890_redo IV 11370101 1 T G 3 3.25 63 0 1 3 4 @G,gg point 0 nongenic,nongenic,nongenic -2859 upstream,-8621 upstream,1662 into {H02I12.1},{T01G1.4},{T01G1.3} 3805 CB6890_redo IV 11551952 1 A G 73 1.00 63 62 4 7 11 @gggGGgG,,,. point 0 nongenic -21 upstream {F12F6.9} 3810 CB6890_redo IV 11655771 1 G A 255 1.00 63 62 0 35 35 @aAAAAaaAaaAAAaaAAAaaAAaAAaAAaaAaAAA point 0 nongenic,nongenic,nongenic -331 upstream,-934 upstream,-954 upstream {ZK809.4},{ZK809.5b},{ZK809.5a} 3811 CB6890_redo IV 11800471 1 A T 255 1.00 63 62 0 31 31 @TTttTtTTTTTtttttTTtttttTtttTttt point 0 missense ATC->AAC[Ile->Asn] {H01G02.2} 3812 CB6890_redo IV 11800936 1 G A 255 1.00 63 62 0 41 41 @AAAaaaAAAaaaAAAaaaaAaAaaaaAAaAAAaaaaaaaaa point 0 nongenic,nongenic,nongenic -8373 upstream,122 into,602 downstream {H01G02.3a,H01G02.3b,H01G02.3c},{H01G02.2},{H01G02.4.1,H01G02.4.2} 3813 CB6890_redo IV 11801018 1 C A 255 1.00 63 62 0 25 25 @aAAAAaAaAAaAaAaaAAAaaaaAA point 0 missense GCC->TCC[Ala->Ser] {H01G02.2} 3814 CB6890_redo IV 11816292 1 G A 221 1.00 63 62 0 13 13 @AAAaAAAAAAaAA point 0 nongenic,nongenic,nongenic -12206 upstream,2077 into,2079 into {H01G02.1},{M117.1.2},{M117.1.1} 3815 CB6890_redo IV 11833211 1 G A 255 1.00 63 62 0 28 28 @aaAAAaaaAAAaaaAAAaaAaaAaaAAa point 0 missense CCA->TCA[Pro->Ser] {M117.4} 3816 CB6890_redo IV 12021852 1 A G 31 1.00 63 30 0 4 4 @GGGG point 0 nongenic -6223 upstream {ZK617.2} 3817 CB6890_redo IV 12048852 1 A G 135 0.00 63 62 0 6 6 @GGGGGG point 0 nongenic,nongenic,nongenic -1971 upstream,615 into,979 downstream {T12G3.2b.2},{T12G3.4},{T12G3.8} 3818 CB6890_redo IV 12048854 1 A G 149 0.00 63 62 0 6 6 @GGGGGG point 0 nongenic,nongenic,nongenic -1973 upstream,617 into,977 downstream {T12G3.2b.2},{T12G3.4},{T12G3.8} 3819 CB6890_redo IV 12069459 1 G A 255 1.00 63 62 0 49 49 @aaaaaaaaaaAaAaaaAAaaaaaaaAaaaAaAAaaaaAaAaaAAaAaAA point 0 SNP none {haw59564} 3820 CB6890_redo IV 12091256 1 T G 7 1.00 63 62 2 2 4 @,,Gg point 0 nongenic,nongenic -2190 upstream,927 into {F11A10.6},{F11A10.3} 3822 CB6890_redo IV 12091575 1 G A 255 1.00 63 62 0 22 22 @AAAAaAAaAAaaAAaaAAAAAa point 0 missense ACT->ATT[Thr->Ile] {F11A10.3} 3823 CB6890_redo IV 12105545 1 A T 255 1.00 63 62 0 34 34 @TtTtTttTTtTtttTTTttTTttTTtTTTTTTtT point 0 three_prime_UTR none {F11A10.4} 3824 CB6890_redo IV 12138205 1 T C 222 9.31 63 62 0 15 15 @CCCCCCCCCCCCCCC point 0 nongenic,nongenic,nongenic -888 upstream,623 downstream,785 downstream {B0001.4},{B0001.8.1},{B0001.8.2,B0001.8.3} 3831 CB6890_redo IV 12176703 1 G A 3 2.00 0 2 16 19 35 @,.aA.A.A.Aa..a.AaaA,a,..aaa,aA...aA point 0 nongenic,nongenic -24243 upstream,1602 into {F35G2.1a.1},{F20B10.1} 3832 CB6890_redo IV 12239969 1 A C 255 1.62 63 62 0 11 11 @cccCCccCcCC point 0 nongenic -1048 upstream {Y39C12A.6} 3833 CB6890_redo IV 12239976 1 C T 52 2.62 63 34 1 4 5 @TtTT, point 0 nongenic -1055 upstream {Y39C12A.6} 3839 CB6890_redo IV 12259988 1 G A 255 1.00 63 62 0 22 22 @AAAAAaaAAAAaAAAaAAAaAA point 0 missense CCC->CTC[Pro->Leu] {C42C1.1} 3842 CB6890_redo IV 12294972 1 G C 3 3.62 63 0 1 4 5 @CCCC, point 0 nongenic,nongenic 1762 into,435 into {C42C1.7},{C42C1.6} 3859 CB6890_redo IV 12334254 1 C A 255 1.00 63 62 0 41 41 @aaAaaaAaAaaAAAaAAaaAAaaaAaAaaaAaAAAAAAAAa point 0 nongenic,nongenic,nongenic -3294 upstream,-3393 upstream,316 into {F19B6.4},{F19B6.2a},{F19B6.1a,F19B6.1b} 3860 CB6890_redo IV 12334255 1 C A 255 1.00 63 62 0 39 39 @AaaaAaAaaAAAaAAaaAAaaaAaAaaaAaAAAAAAAAa point 0 nongenic,nongenic,nongenic -3293 upstream,-3394 upstream,315 into {F19B6.4},{F19B6.2a},{F19B6.1a,F19B6.1b} 6736 CB6890_redo IV 12336928 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @..,gg indel 0 nongenic,nongenic -2358 upstream,-621 upstream {F19B6.1a,F19B6.1b},{F19B6.4} 3861 CB6890_redo IV 12336929 1 A T 25 1.00 63 62 2 3 5 @ttT.. point 0 SNP none {snp_F19B6[2]} 3862 CB6890_redo IV 12341066 1 A G 57 1.00 63 62 5 8 13 @..,,,ggGGGGGg point 0 nongenic,nongenic -8846 upstream,679 downstream {ZC518.1a,ZC518.1b,ZC518.1c},{F19B6.4} 3863 CB6890_redo IV 12341067 1 G A 84 1.00 63 56 4 8 12 @.,,,aaAAAAAa point 0 nongenic,nongenic -8845 upstream,680 downstream {ZC518.1a,ZC518.1b,ZC518.1c},{F19B6.4} 6738 CB6890_redo IV 12393300 1 X X -1000 -999.99 -1000 -1000 3 -1 2 @,.cc.c indel -1 nongenic,nongenic -11097 upstream,1209 into {F28D1.10},{F28D1.9} 3864 CB6890_redo IV 12393525 1 C A 255 1.00 63 62 0 31 31 @AAaAAaAAAaAaaAAAAAaAaAAAAaAaAAA point 0 missense,SNP ATG->ATT[Met->Ile],none {F28D1.9},{haw59770} 3873 CB6890_redo IV 12430471 1 C G 88 1.81 63 46 0 5 5 @ggggg point 0 nongenic,nongenic,nongenic,nongenic -1986 upstream,-2136 upstream,2009 into,2022 into {F08G5.4},{F08G5.7},{F08G5.5.2},{F08G5.5.1} 3874 CB6890_redo IV 12430475 1 G C 157 2.50 63 62 0 8 8 @cccccCcc point 0 nongenic,nongenic,nongenic,nongenic -1990 upstream,-2132 upstream,2005 into,2018 into {F08G5.4},{F08G5.7},{F08G5.5.2},{F08G5.5.1} 3875 CB6890_redo IV 12430477 1 A G 163 2.31 63 62 0 9 9 @gggggGggG point 0 nongenic,nongenic,nongenic,nongenic -1992 upstream,-2130 upstream,2003 into,2016 into {F08G5.4},{F08G5.7},{F08G5.5.2},{F08G5.5.1} 3876 CB6890_redo IV 12430533 1 C T 255 6.00 63 62 0 34 34 @ttTttttttTtTtTttTTTttTTTTtttTtTtTt point 0 nongenic,nongenic,nongenic,nongenic -2048 upstream,-2074 upstream,1947 into,1960 into {F08G5.4},{F08G5.7},{F08G5.5.2},{F08G5.5.1} 3881 CB6890_redo IV 12433583 1 G T 41 1.00 63 62 1 3 4 @.ttt point 0 nongenic,nongenic -2212 upstream,976 into {F08G5.6},{F08G5.7} 3882 CB6890_redo IV 12433585 1 T G 92 1.00 63 40 0 4 4 @aggg point 0 nongenic,nongenic -2210 upstream,978 into {F08G5.6},{F08G5.7} 3885 CB6890_redo IV 12545902 1 C T 255 1.00 63 62 0 29 29 @TtTttTTTttttttTTTTTtTtTTTtTTT point 0 SNP none {haw59832} 3886 CB6890_redo IV 12564353 1 G A 255 1.00 63 62 0 22 22 @AaAaaaaAaaaAaAaAAAAaAA point 0 missense CCT->CTT[Pro->Leu] {K08E7.1.1,K08E7.1.2} 3887 CB6890_redo IV 12581671 1 C T 255 1.00 63 62 0 37 37 @tTtTTttttTtTTtTtTtttttTtTTttTTTttTtTT point 0 SNP none {haw59843} 3891 CB6890_redo IV 12697437 1 G C 255 1.00 63 62 0 23 23 @ccCCcCcCcCcCCCcCCCCCcCc point 0 SNP none {haw59886} 3901 CB6890_redo IV 12771599 1 G C 63 1.00 63 10 1 3 4 @,ccc point 0 nongenic,nongenic -13956 upstream,-2125 upstream {C36H8.3.1},{ZK897.1} 3902 CB6890_redo IV 12781072 1 A C 132 1.00 63 62 0 9 9 @CCCCCCCCg point 0 nongenic,nongenic,nongenic -23429 upstream,-7953 upstream,5870 into {C36H8.3.1},{F07C6.3},{ZK897.1} 3903 CB6890_redo IV 12979116 1 T C 255 1.00 63 62 0 40 40 @CCcCccCccCCCcCccCCCccccccCccCcCCCccCCCCC point 0 SNP none {haw60243} 3904 CB6890_redo IV 13092702 1 G C 255 1.00 63 62 0 41 41 @cCcCcCcCcccCcCCcCcccCcCCCCCCCCCCccCCCCCCC point 0 nongenic,nongenic,nongenic -1272 upstream,-1666 upstream,1111 into {C39E9.12.1,C39E9.12.2},{C39E9.9},{C39E9.11} 3905 CB6890_redo IV 13127459 1 T C 255 1.00 63 62 0 34 34 @ccCccccCCCccCCCccCcccccccCCccccCCc point 0 SNP none {haw60403} 3906 CB6890_redo IV 13145433 1 T C 13 1.00 63 62 8 12 20 @CCC.GC,,,CCC,,,,cccc point 0 nongenic,nongenic -3110 upstream,-4115 upstream {F09E8.1},{F09E8.8} 3907 CB6890_redo IV 13188308 1 C G 4 1.00 63 0 2 4 6 @..gGgg point 0 nongenic -1425 upstream {F58D2.2} 3910 CB6890_redo IV 13451972 1 T C 255 1.00 63 62 0 25 25 @CcCcCccccccCcCccCcccccccc point 0 SNP none {haw60794} 3916 CB6890_redo IV 13549411 1 T A 197 2.12 63 62 24 231 255 @.,..,..,,,,...,,,....AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA point 0 nongenic,nongenic,nongenic -1211 upstream,209 downstream,317 downstream {F52G2.3.1},{Y45F10B.13b},{Y45F10B.13a,Y45F10B.13c} 3918 CB6890_redo IV 13563245 1 G C 255 1.00 63 62 0 29 29 @CcCCCcCccccCCccCCCccccccCcCCc point 0 SNP none {haw60948} 3919 CB6890_redo IV 13563393 1 G T 255 1.00 63 62 0 33 33 @ttTtTTTTTtttTTTTTTTtttTTTTtTTTtTt point 0 SNP none {haw60949} 3920 CB6890_redo IV 13602476 1 T A 255 1.00 63 62 0 42 42 @AAaAAaaAAAAAaaaAAaAAAAaaAAAAAaAAAAaAaAaaaA point 0 SNP none {haw60978} 3921 CB6890_redo IV 13662115 1 T G 255 1.00 63 62 0 48 48 @ggGGGGgGggGGGGggggGGGgGGgggggGGgGgGGGGggGgGgGGGG point 0 SNP,three_prime_UTR none,none {haw61075},{Y45F10C.2} 3926 CB6890_redo IV 13695677 1 C G 251 1.00 63 62 0 11 11 @gGggggGGggg point 0 nongenic -6914 upstream {T23G4.2} 3927 CB6890_redo IV 13695678 1 G C 243 1.00 63 62 0 12 12 @cCccccCCcccc point 0 nongenic -6915 upstream {T23G4.2} 3941 CB6890_redo IV 13793476 1 A C 255 1.00 63 62 0 16 16 @cCCccCcCCcCCCCCc point 0 nongenic,nongenic -4787 upstream,2715 into {Y45F10D.9},{Y45F10D.7} 3944 CB6890_redo IV 13838595 1 G A 255 1.00 63 62 0 34 34 @aaaAAaAAaaaaaAAAAAaaaaAAaaaAAaaAaa point 0 nongenic,nongenic,nongenic,nongenic -15726 upstream,-2237 upstream,6085 into,6351 into {B0513.6},{H08M01.1},{H08M01.2a},{H08M01.2b} 3945 CB6890_redo IV 13847645 1 C G 12 1.00 63 8 0 4 4 @gggg point 0 nongenic -6676 upstream {B0513.6} 3951 CB6890_redo IV 14161847 1 T C 3 1.00 63 0 2 4 6 @C,,ccc point 0 nongenic,nongenic,nongenic -3831 upstream,-3908 upstream,993 into {R05A10.8},{R05A10.6},{R05A10.7} 3956 CB6890_redo IV 14298717 1 A G 42 1.00 63 62 2 5 7 @,,GgGGG point 0 SNP none {haw62149} 3958 CB6890_redo IV 14347514 1 C A 255 1.00 63 62 0 34 34 @aaaAAAaaaaAaAaaaaAaAAaAaaAaaaaaAaA point 0 SNP none {haw62226} 3961 CB6890_redo IV 14351388 1 T G 13 1.00 63 0 0 5 5 @GGGGG point 0 nongenic,nongenic -671 upstream,-9839 upstream {Y67A10A.1},{Y67A10A.6} 3973 CB6890_redo IV 14351450 1 A C 7 1.12 63 32 2 5 7 @.cc.ccc point 0 nongenic,nongenic -733 upstream,-9777 upstream {Y67A10A.1},{Y67A10A.6} 3974 CB6890_redo IV 14414307 1 T A 255 1.00 63 62 0 36 36 @aaaAAAAAaAaAaAaAAAaaAAAAAAAaaaaAAAAA point 0 nongenic -1455 upstream {F55B11.1} 3986 CB6890_redo IV 14662594 1 T A 36 1.00 63 14 2 4 6 @,,AAAA point 0 nongenic -1041 upstream {Y57G11C.37} 3987 CB6890_redo IV 14670519 1 A G 51 1.00 63 18 0 4 4 @GGGG point 0 nongenic,nongenic -12486 upstream,4584 into {Y57G11C.31},{Y57G11C.37} 3999 CB6890_redo IV 14992694 1 G T 255 1.00 63 62 0 27 27 @ttttTtTTtTTTtttTttttTTTTttT point 0 SNP none {haw63537} 4000 CB6890_redo IV 14998777 1 C T 255 1.00 63 62 0 27 27 @TttTtTtttttttTttTTTTTTtTttT point 0 SNP none {haw63554} 4023 CB6890_redo IV 15153482 1 A G 8 4.44 63 0 9 14 23 @GGGGGC,G,,GGG,g,,g,g,,g point 0 nongenic,nongenic -3132 upstream,-6317 upstream {Y40H7A.2},{Y40H7A.1} 4025 CB6890_redo IV 15313323 1 A T 255 1.00 63 62 0 32 32 @tTTTTttTTtTTTTttTTTtTTttttTTtTTT point 0 SNP none {haw64171} 4026 CB6890_redo IV 15373556 1 C G 14 3.25 63 2 0 4 4 @Gggg point 0 nongenic -4867 upstream {Y73F8A.20} 4031 CB6890_redo IV 15373564 1 C G 41 4.00 63 2 0 4 4 @gggg point 0 nongenic -4859 upstream {Y73F8A.20} 4041 CB6890_redo IV 15652320 1 C G 4 1.00 63 8 2 9 11 @GGGGGGG,GG, point 0 nongenic -4247 upstream {Y105C5A.14} 4049 CB6890_redo IV 15749705 1 A G 255 1.00 63 62 0 39 39 @gTgGgGGggGGggGggGGGgggggggggGGgGGgggGGg point 0 SNP none {haw64925} 6753 CB6890_redo IV 15798017 0 X X -1000 -999.99 -1000 -1000 11 -8 3 @,...,,,,,,,ggg indel 1 nongenic 64 downstream {Y105C5A.22} 4068 CB6890_redo IV 15798018 1 T G 67 2.31 63 14 1 11 12 @ggGGGGGG,ggg point 0 nongenic 62 downstream {Y105C5A.22} 4069 CB6890_redo IV 15852032 1 T G 22 1.00 63 6 0 5 5 @GGggg point 0 nongenic,nongenic -18570 upstream,813 into {Y105C5B.1},{Y105C5A.24} 4074 CB6890_redo IV 15853857 1 G C 3 2.81 63 34 1 5 6 @,CTCCC point 0 nongenic -16745 upstream {Y105C5B.1} 4077 CB6890_redo IV 15871052 1 T G 255 1.00 63 62 0 26 26 @GggGGgGgGgGgggGgggGgGgGGgG point 0 missense,SNP TTG->TGG[Leu->Trp],none {Y105C5B.1},{haw65169} 4084 CB6890_redo IV 15925394 1 A T 255 1.00 63 62 0 56 56 @TtTTtTTtTTttTTTTttTTTTttTtTttTTttttTtttTTTTtTTGTTTTTTTTt point 0 SNP none {haw65323} 4086 CB6890_redo IV 15935820 1 T C 255 1.00 63 62 0 30 30 @cCccccCCCcCccCCCcCCCCCcCCCCCcC point 0 SNP none {haw65337} 6754 CB6890_redo IV 15965558 2 X X -1000 -999.99 -1000 -1000 5 -3 2 @...., indel -2 frameshift,SNP none,none {Y105C5B.18},{uCE4-1508} 4087 CB6890_redo IV 16085619 1 C A 255 1.00 63 62 0 45 45 @AAAAaaAAAaAaaAaaaAAaaAAaAaaAAaAaaaaaaAAaaAAaA point 0 SNP none {haw65640} 4088 CB6890_redo IV 16095875 1 G C 3 7.00 63 2 4 5 9 @C,.CCCC.. point 0 nongenic -36582 upstream {Y105C5B.29} 4091 CB6890_redo IV 16199503 1 T C 255 1.00 63 62 0 40 40 @cccCcccCCcCCCCCcCCccCCcCCcCcCCccCCCCCCCC point 0 silent CTT->CTC[Leu->Leu] {Y7A9A.1} 4094 CB6890_redo IV 16426597 1 A T 45 2.31 63 38 2 4 6 @.,tttt point 0 nongenic,nongenic -5592 upstream,1989 into {Y10G11A.2a},{Y10G11A.1} 4095 CB6890_redo IV 16426598 1 T A 136 2.62 63 38 0 5 5 @Aaaaa point 0 nongenic,nongenic -5591 upstream,1990 into {Y10G11A.2a},{Y10G11A.1} 4098 CB6890_redo IV 16455760 1 C T 255 1.75 63 62 0 18 18 @tTtTTttTTTTTttTtTt point 0 SNP none {haw66409,pas29567} 4102 CB6890_redo IV 16472664 1 C G 3 1.00 63 2 0 5 5 @gggga point 0 nongenic -1824 upstream {VY10G11R.1} 4103 CB6890_redo IV 16533636 1 T A 255 1.06 63 62 0 38 38 @AAAAaAaaaaaaAaaaAaaAAaAaaAAAAAAAaAAAAA point 0 missense,SNP TTT->TTA[Phe->Leu],none {Y51H4A.6},{haw66558} 6756 CB6890_redo IV 16571390 0 X X -1000 -999.99 -1000 -1000 1 1 2 @.CC indel 0 nongenic -28537 upstream {Y51H4A.7.1} 4109 CB6890_redo IV 16615932 1 C G 3 1.56 63 0 2 5 7 @,G,Tggg point 0 nongenic,nongenic -10253 upstream,-13197 upstream {Y51H4A.10},{Y51H4A.9} 4110 CB6890_redo IV 16615935 1 A G 3 1.44 63 2 0 9 9 @CGCCggggg point 0 nongenic,nongenic -10250 upstream,-13200 upstream {Y51H4A.10},{Y51H4A.9} 4111 CB6890_redo IV 16615938 1 C G 3 1.25 63 2 2 6 8 @G,g.gggg point 0 nongenic,nongenic -10247 upstream,-13203 upstream {Y51H4A.10},{Y51H4A.9} 4112 CB6890_redo IV 16615940 1 C G 4 1.12 63 2 2 7 9 @,gggggg.g point 0 nongenic,nongenic -10245 upstream,-13205 upstream {Y51H4A.10},{Y51H4A.9} 4113 CB6890_redo IV 16619779 1 T A 18 1.00 63 62 4 5 9 @aAaaA,.,, point 0 nongenic,nongenic -17044 upstream,-6406 upstream {Y51H4A.9},{Y51H4A.10} 4114 CB6890_redo IV 16619813 1 C G 255 1.00 63 62 0 22 22 @GgGGGGGGGgGgGGGGGgGgGg point 0 SNP none {haw66710,snp_Y51H4A[11]} 4117 CB6890_redo IV 16646588 1 T A 205 1.00 63 62 0 11 11 @aaaaaaaaaaa point 0 SNP none {haw66770} 4122 CB6890_redo IV 16731626 1 A C 7 6.00 63 0 1 3 4 @.ccc point 0 nongenic,nongenic -4660 upstream,11421 into {Y51H4A.25a.2,Y51H4A.25b},{Y51H4A.25a.1} 4124 CB6890_redo IV 16746563 1 T C 6 9.38 0 2 4 9 13 @CCCCccc....cc point 0 nongenic -460 upstream {Y43D4A.2} 4126 CB6890_redo IV 16760578 1 C T 255 1.25 63 62 0 29 29 @TTtttttTTTTTTTTTTTtTTttTTtTTT point 0 SNP none {haw66850} 4127 CB6890_redo IV 16786381 1 G T 255 1.00 63 62 1 44 45 @tttTtTTtttTtttTTTtTtTTtTttTTttTTTtttttTT.TTtT point 0 SNP none {haw66890} 4128 CB6890_redo IV 16848870 1 A C 255 3.56 63 62 0 27 27 @cCCcCCcCCCCCCcccCCCcccCcCCC point 0 nongenic,nongenic,nongenic 1084 into,430 into,704 into {Y116A8A.9.2},{Y116A8A.9.3},{Y116A8A.9.1} 4137 CB6890_redo IV 16939349 1 T G 255 1.00 63 62 0 21 21 @gGGgGGGgGgggggGgGgGgG point 0 SNP none {haw67104} 4138 CB6890_redo IV 16941562 1 G C 22 1.00 63 24 1 6 7 @CCCCC.C point 0 nongenic,nongenic,nongenic -2493 upstream,-5522 upstream,1161 into {Y116A8C.10b.2},{Y116A8C.12.1,Y116A8C.12.2},{Y116A8C.9} 4144 CB6890_redo IV 16945230 1 A G 99 1.75 63 62 22 65 87 @gGggGgG.GG.g.gGgGG,gGGGG,,,.GGGggGG.G,.ggGgGGGGGgGG..GGGggggggGGGGGG,gGg,Gg.,.g,,.GGGG. point 0 nongenic,nongenic,nongenic -1854 upstream,-6161 upstream,1583 into {Y116A8C.12.1,Y116A8C.12.2},{Y116A8C.10b.2},{Y116A8C.9} 4155 CB6890_redo IV 17075554 1 T C 14 1.00 63 2 0 4 4 @CCCc point 0 nongenic,nongenic -4732 upstream,220 into {Y116A8C.24},{Y116A8C.25} 4158 CB6890_redo IV 17086649 1 T C 255 1.00 63 62 0 14 14 @CcCcCCcccccccc point 0 missense CAT->CGT[His->Arg] {Y116A8C.26a} 6760 CB6890_redo IV 17100785 0 X X -1000 -999.99 -1000 -1000 9 -8 1 @,....ca.,,, indel 2 nongenic,nongenic -508 downstream,-582 upstream {Y116A8C.30a},{Y116A8C.28b,Y116A8C.28c} 4189 CB6890_redo IV 17156464 1 C G 4 1.00 63 0 1 4 5 @,Gggg point 0 nongenic -5537 upstream {Y116A8C.40} 4190 CB6890_redo IV 17156472 1 A G 17 1.00 63 0 0 6 6 @Gggggg point 0 nongenic -5545 upstream {Y116A8C.40} 4192 CB6890_redo IV 17156477 1 C G 3 1.00 63 0 1 7 8 @G.gggggg point 0 nongenic -5550 upstream {Y116A8C.40} 4193 CB6890_redo IV 17486484 1 T G 3 1.00 63 0 0 5 5 @GGGGc point 0 nongenic,nongenic -3198 upstream,452 downstream {4R79.2},{4R79.1a,4R79.1b} 4196 CB6890_redo IV 17491300 1 G A 255 1.00 63 62 0 42 42 @AAaaaaAaAAAAAaaaAAaaaAaAAAAAaaaAAaAAaAAAAa point 0 SNP none {haw67744} 4197 CB6890_redo IV 17491319 1 C T 255 1.00 63 62 0 39 39 @tTTtttTtTTTTTtttTTtTTtTTTTtttTtTtTTtTTt point 0 SNP none {haw67745} 6255 CB6890_redo MtDNA 4649 1 C T 104 1.00 63 62 361 -106 255 @T,TT,,,T,TT,T,TT,,Ttt...t,TT,TT.t....T,,,TT,TGTTt.ttt.t.,TT,.ttt.t.tttt..tTTTT,TTTT.t..t....t...tTT point 0 missense GCA->GTA[Ala->Val] {MTCE.21} 6256 CB6890_redo MtDNA 12998 1 C T 255 1.00 63 62 1 254 255 @TTTttttTtttttttTttttTTTttttTTTTTttttttttTTTTTTTTTTtttttTTTTttttttttTTTTttttttttttTTTTTTTTtttttttttt point 0 silent,three_prime_UTR GGC->GGT[Gly->Gly],none {MTCE.35},{MTCE.34} 4199 CB6890_redo V 705 1 C T 255 2.00 63 62 9 28 37 @Tt..TT,Tt,,TTTtT,T...TTtTtttTtTTTTTTT point 0 nongenic -774 upstream {cTel3X.1} 4200 CB6890_redo V 721 1 C G 255 1.75 63 62 3 24 27 @...GGgGgggGgGGGGGGGGggGGggG point 0 nongenic -758 upstream {cTel3X.1} 4201 CB6890_redo V 46068 1 G C 255 1.00 63 62 0 16 16 @CcCCCCCCCccCcccc point 0 nongenic,nongenic -2853 upstream,602 into {B0348.1},{B0348.2} 4202 CB6890_redo V 46069 1 T G 255 1.00 63 62 0 18 18 @GgGGGGGGGggGggggGG point 0 nongenic,nongenic -2852 upstream,603 into {B0348.1},{B0348.2} 4203 CB6890_redo V 46079 1 C A 255 1.00 63 62 0 13 13 @AaaaaAAAAAAaa point 0 nongenic,nongenic -2842 upstream,613 into {B0348.1},{B0348.2} 4204 CB6890_redo V 46135 1 C G 255 1.00 63 62 0 30 30 @GGGGgggGGGgGgggggGGGgggGGgGgGg point 0 SNP none {haw67774} 4205 CB6890_redo V 78324 1 C T 255 1.00 63 62 0 36 36 @TttTtTtttTTtTttTttTtTTttTtttttTTttTT point 0 nongenic -7317 upstream {F56E10.2} 4206 CB6890_redo V 108179 1 C T 255 1.00 63 62 0 27 27 @TttTTTTTTTTTttTtTttTtTttTTT point 0 missense CTT->TTT[Leu->Phe] {Y38C9A.1} 4207 CB6890_redo V 158341 1 G C 4 1.75 63 0 3 5 8 @CC,C,,cc point 0 nongenic,nongenic,nongenic -6236 upstream,1514 into,1517 into {W03F9.4.2},{W03F9.5.2},{W03F9.5.1} 4208 CB6890_redo V 158345 1 T C 5 1.62 63 0 0 8 8 @CCCCCcgc point 0 nongenic,nongenic,nongenic -6240 upstream,1518 into,1521 into {W03F9.4.2},{W03F9.5.2},{W03F9.5.1} 4209 CB6890_redo V 198833 1 A T 255 1.00 63 62 0 36 36 @tttttTtttttTTTtTTTTTtTTtTTtTTTTttTTt point 0 nongenic,nongenic -3894 upstream,1855 into {DC2.8},{Y108G3AL.7} 4210 CB6890_redo V 264786 1 C T 255 1.00 63 62 0 31 31 @TtTTTtTttTTttTtTTTTtTTTttTTTTTt point 0 nongenic,nongenic -3520 upstream,-6804 upstream {Y58G8A.1},{R02C2.4} 4211 CB6890_redo V 265179 1 C A 255 3.00 63 62 0 255 255 @AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAaaaAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAaAAAAAAAAAAAAAAA point 0 nongenic,nongenic -3127 upstream,-7197 upstream {Y58G8A.1},{R02C2.4} 4212 CB6890_redo V 265207 1 C A 255 1.31 63 62 0 255 255 @AAaaAaaAAAAAAAaAAAAAAAAAAAAaaaaAAAAAAAAAAAAAAAAAAAAAAaaaAAAAAAAAAaaaAAAAAAAAAAAAAaaaaaaaaaaaaAAAAAA point 0 SNP none {haw67964} 4213 CB6890_redo V 265223 1 T C 255 3.38 63 62 578 -323 255 @,CCCCC.C,C,..,CC,,...C,C,CCcC,C,CCCCCCc.ccc..cccccCC,CCCC,Cc.cccCCC,CCCCCCCCCCC,,CCCC,CC,,CCccc.ccc point 0 nongenic,nongenic -3083 upstream,-7241 upstream {Y58G8A.1},{R02C2.4} 4215 CB6890_redo V 265892 1 G T 133 3.88 48 26 78 177 255 @CCCTTCttttttttttttctCCTT,CTC,Tttt.tttttttttt,,ttttttt.ttccttcctttTt.ctctctttcttt.,T,,,,tttct.t.tttt point 0 nongenic,nongenic -2414 upstream,-7910 upstream {Y58G8A.1},{R02C2.4} 4219 CB6890_redo V 266107 1 T C 3 5.94 0 0 21 72 93 @,CCCCC..CCC.CC,Ccc,..,C.,cC,,C,CC,CCCCCcc,CCCCCCCCC,CCcCC,.C.CCCCCCCCCCCcCC,CCCCCCCCCccCCCCCC point 0 nongenic,nongenic -2199 upstream,-8125 upstream {Y58G8A.1},{R02C2.4} 4220 CB6890_redo V 266166 1 A C 12 3.69 46 2 180 75 255 @.....,...,,,CC.c..CCCC,,,C....C,C,,c.CC,,CCC,C.c...CCCCCCCC,C.cc,,,C,Cc.c.c,,CCCC,C...c,CCC,,CC.ccc point 0 nongenic,nongenic -2140 upstream,-8184 upstream {Y58G8A.1},{R02C2.4} 4222 CB6890_redo V 266622 1 T C 3 5.31 0 2 17 23 40 @cC.,..CC,..Cc.CCC.C..c,cCC.C,C..c,cccccc point 0 nongenic,nongenic -1684 upstream,-8640 upstream {Y58G8A.1},{R02C2.4} 4223 CB6890_redo V 266681 1 A C 11 3.56 0 50 405 -150 255 @........,cc.cc,,.ccc.CC,,CcccccC,,..cccc..C,C,ccc.c..cc,C,,cccccccccccCC,CCC.ccc..cc.c.cC,,CC,,cc.. point 0 nongenic,nongenic -1625 upstream,-8699 upstream {Y58G8A.1},{R02C2.4} 4225 CB6890_redo V 306925 1 G A 231 1.06 63 62 0 17 17 @AAAAAAAAAAAAAAAAA point 0 nongenic,nongenic,nongenic -2210 upstream,1487 into,494 downstream {F33E11.3},{F33E11.6b},{F33E11.6a} 4231 CB6890_redo V 319498 1 A G 11 1.19 63 12 5 6 11 @,G.GCGGG,.. point 0 nongenic,nongenic -7961 upstream,-859 upstream {F33E11.6a,F33E11.6b},{F33E11.1} 4232 CB6890_redo V 361876 1 A G 255 1.00 63 62 0 26 26 @GgggggGggGgGGgGGGgggGgGGGG point 0 SNP none {haw68038} 4234 CB6890_redo V 443739 1 C T 255 1.00 63 62 0 23 23 @ttttttTTttTTTtTTttTtTTt point 0 nongenic -444 upstream {M02H5.9} 4238 CB6890_redo V 472221 1 C T 255 1.19 63 62 0 16 16 @TtTtTTTTTTTTTTtT point 0 nongenic,nongenic -3659 upstream,-668 upstream {M02H5.12},{M02H5.2} 4248 CB6890_redo V 547063 1 T A 255 1.00 63 62 0 26 26 @AAAAAaaAAAAAaaaaAaaAAAAaaA point 0 missense ACT->TCT[Thr->Ser] {C14C6.6} 4249 CB6890_redo V 547112 1 A C 255 1.00 63 62 0 41 41 @CCcCcCCCCccCccCCCCccCCCcCCCCCCCCcCccccCCc point 0 silent ACT->ACG[Thr->Thr] {C14C6.6} 4250 CB6890_redo V 757377 1 C T 255 1.00 63 62 0 31 31 @tttttTTTTTTTtttttTtttttttTTTttt point 0 silent ATC->ATT[Ile->Ile] {C05E4.2} 4251 CB6890_redo V 907030 1 C T 255 1.00 63 62 0 30 30 @TtTttttttTtttttttTtttTttTTtTTt point 0 SNP none {haw69383} 4255 CB6890_redo V 1067350 1 C T 255 1.00 63 62 0 25 25 @ttTtTtTTTTtTTTtTTTtTtttTt point 0 missense GGA->GAA[Gly->Glu] {K10C9.7} 4256 CB6890_redo V 1088888 1 C T 255 1.00 63 62 0 32 32 @TtTTTtTTtTTTtTttttTttTTtTTTTttTT point 0 missense TCC->TTC[Ser->Phe] {Y50D4B.5} 4269 CB6890_redo V 1199166 1 A C 3 1.00 63 0 0 5 5 @ccccg point 0 nongenic -8144 upstream {Y50D4A.5} 4281 CB6890_redo V 1210116 1 G A 15 1.00 63 0 0 6 6 @aaaaaa point 0 nongenic 2226 into {Y50D4A.1a,Y50D4A.1b} 163058 CB6890_redo V 1210382 167 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered,uncovered codon 140 to codon 196 (7 % of 822 codons),codon 9 to codon 65 (8 % of 691 codons) {Y50D4A.1a},{Y50D4A.1b} 4282 CB6890_redo V 1211228 1 T A 45 1.38 63 62 3 3 6 @,.,aaa point 0 nongenic 3338 into {Y50D4A.1a,Y50D4A.1b} 4283 CB6890_redo V 1211229 1 C A 64 1.38 63 44 1 5 6 @A.Aaaa point 0 nongenic 3339 into {Y50D4A.1a,Y50D4A.1b} 4284 CB6890_redo V 1211240 1 A G 3 1.00 63 10 2 4 6 @,gc.gt point 0 nongenic 3350 into {Y50D4A.1a,Y50D4A.1b} 4289 CB6890_redo V 1273400 1 C G 179 2.31 63 62 0 14 14 @gggggggggggggg point 0 nongenic,nongenic 425 downstream,811 downstream {Y75B7B.1},{Y75B7B.2} 4290 CB6890_redo V 1273408 1 C G 124 2.75 63 62 0 11 11 @ggggggggggg point 0 nongenic,nongenic 433 downstream,803 downstream {Y75B7B.1},{Y75B7B.2} 4291 CB6890_redo V 1273548 1 C G 66 1.31 63 62 0 15 15 @ggggggggggggggg point 0 nongenic,nongenic 573 downstream,663 downstream {Y75B7B.1},{Y75B7B.2} 4294 CB6890_redo V 1454630 1 C T 255 1.00 63 62 0 27 27 @TtttTTTTttttTtTtTtttTTtttTT point 0 nongenic,nongenic,nongenic -432 upstream,288 downstream,310 downstream {R09B5.12},{R09B5.7b},{R09B5.7a} 4296 CB6890_redo V 1561747 1 G C 3 1.00 63 2 2 5 7 @CT.c.cc point 0 nongenic,nongenic -15943 upstream,444 downstream {F16B4.8},{F52F10.1} 4297 CB6890_redo V 1561748 1 G C 3 1.00 63 2 2 5 7 @C,cccc. point 0 nongenic,nongenic -15942 upstream,445 downstream {F16B4.8},{F52F10.1} 4298 CB6890_redo V 1576859 1 T A 255 1.00 63 62 0 25 25 @AAAAaAAAAaAaAaAaAaaAAaaAA point 0 nongenic -831 upstream {F16B4.8} 4299 CB6890_redo V 1589223 1 C T 255 1.00 63 62 1 22 23 @TTTtTTtTtTttTttttTttt.t point 0 nongenic,nongenic -104 upstream,70 downstream {F16B4.5b},{F16B4.6} 4302 CB6890_redo V 1620670 1 C T 255 1.00 63 62 0 36 36 @tttttTtTTTtttttTtTTTTTtTTTtTtTtTTTTT point 0 missense GTA->ATA[Val->Ile] {F16B4.12b} 4303 CB6890_redo V 1637978 1 G T 175 5.94 63 62 91 127 218 @T,TTT.TT,TT,,.,.TT.TTTTTT,TT,TT,Tttt,,TTTt,TTT,TTT.,,T,TTT.T,TTTt.,T,,TtTTTT.TT,T.tTTTTT,,tttTTT,,T point 0 nongenic,nongenic -2330 upstream,1305 into {Y46H3D.2},{Y46H3D.3} 4304 CB6890_redo V 1638167 1 T A 3 7.06 0 2 87 122 209 @.aA.a.a,,A,Aa...aA,A,.aA.AA.AAAAAAAaAAA.AA.A,aaaAAAA.AA..,AA,a.A,aAAaAAAA.AAA.AaAAAAAAaa.AAAA.,A..A point 0 nongenic,nongenic -2141 upstream,1116 into {Y46H3D.2},{Y46H3D.3} 4306 CB6890_redo V 1638979 1 A G 255 3.06 63 62 161 94 255 @GGGGG,GG,,,GG..g.g..ggGG,,G,,,,g.g.ggg.,,GGG,,,G,GG,gg..g.gggg.gggggg,GGGG,,G,,,Ggggg.ggg.gg.gggggg point 0 nongenic,nongenic -1329 upstream,304 into {Y46H3D.2},{Y46H3D.3} 4307 CB6890_redo V 1687051 1 A G 255 1.00 63 62 0 43 43 @GGgggGggGGgGggggGgGgGGggGGgGGGGGGggGGGgGGGg point 0 nongenic,nongenic -444 upstream,185 downstream {Y46H3C.4},{K04F1.16} 4308 CB6890_redo V 1712941 1 C T 6 4.69 0 2 2 10 12 @tT..TtTtTttT point 0 nongenic,nongenic -4302 upstream,1550 into {ZK697.5},{Y46H3C.1} 4313 CB6890_redo V 1714669 1 T C 179 2.62 63 62 11 15 26 @...........CCCCCCCCCCCCcCC point 0 nongenic,nongenic -2574 upstream,732 into {ZK697.5},{Y46H3C.1} 4314 CB6890_redo V 1719086 1 C T 255 1.00 63 62 0 38 38 @TttTTTTTTtTTTtttTttTTtttTtttTTTttttTtT point 0 missense TCT->TTT[Ser->Phe] {ZK697.5} 4330 CB6890_redo V 1914844 1 C T 255 1.00 63 62 0 23 23 @TTTTtGTtTTTTTttTtttTttT point 0 nongenic 1010 into {Y32G9A.10} 4332 CB6890_redo V 2019955 1 A G 6 1.00 63 62 3 4 7 @gggG,,. point 0 nongenic,nongenic -2656 upstream,-3416 upstream {F59A7.5b},{F59A7.2} 4334 CB6890_redo V 2094056 1 C T 255 1.06 63 62 0 32 32 @tTTTtTTtTtttTTtTtTttTTTtTtTTTTTt point 0 silent CTG->CTA[Leu->Leu] {F36F12.2} 4335 CB6890_redo V 2137767 1 C T 255 1.00 63 62 0 38 38 @ttTTTtTTTTtTTtttttTTTttTTTTTTTtTTTtttt point 0 nongenic,nongenic 2066 into,2276 into {F22F7.7.2},{F22F7.7.1} 4336 CB6890_redo V 2225017 1 C T 255 1.00 63 62 0 37 37 @TTTTTTTTtTTTtTTTtTtttttTTTttttTTttTtt point 0 nongenic,nongenic -412 upstream,280 into {F44C8.4},{F44C8.5b} 4337 CB6890_redo V 2255011 1 G A 224 2.00 63 62 0 16 16 @AAAAAAAAAAAAAAAA point 0 nongenic -407 upstream {F41B5.8} 4338 CB6890_redo V 2262585 1 C T 255 1.00 63 62 0 19 19 @TTTttTTTtTtTtTTtTtT point 0 missense GAG->AAG[Glu->Lys] {F41B5.10} 4344 CB6890_redo V 2578146 1 G C 160 1.00 63 62 1 8 9 @CCCCcCC.C point 0 nongenic,nongenic -2725 upstream,244 into {C29G2.3},{C29G2.4} 4345 CB6890_redo V 2588586 1 A G 3 1.00 63 2 2 8 10 @Gg..cggggg point 0 nongenic,nongenic -1805 upstream,-2677 upstream {C29G2.2},{C29G2.6} 4347 CB6890_redo V 2588591 1 A C 3 1.00 63 2 2 10 12 @Gcccc.cccc.c point 0 nongenic,nongenic -1800 upstream,-2682 upstream {C29G2.2},{C29G2.6} 4350 CB6890_redo V 2709473 1 C T 255 1.00 63 62 0 27 27 @tttttTtTttTTTTtttTtTTtttTtt point 0 nongenic,nongenic 2114 into,2346 into {C24B9.3a},{C24B9.3b} 4351 CB6890_redo V 2745025 1 C T 255 1.00 63 62 0 27 27 @TTTTTttttTttttTTTTTTTTTtttT point 0 nongenic -2627 upstream {C24B9.12} 4365 CB6890_redo V 2797856 1 C T 255 1.00 63 62 0 21 21 @ttTTTtTtttTTtTttTTtTT point 0 missense GAT->AAT[Asp->Asn] {F54E2.3a,F54E2.3c,F54E2.3d} 4366 CB6890_redo V 2886702 1 T C 6 2.06 63 62 13 15 28 @...,.,,,.,...CcCcccCCCcccccC point 0 nongenic,nongenic 277 downstream,487 downstream {F37B4.9},{F37B4.8} 4368 CB6890_redo V 2955598 1 C T 255 1.38 63 62 0 31 31 @TtttTttTTtTtTttTttttttttttTTTtt point 0 nongenic -156 upstream {H05B21.2} 4369 CB6890_redo V 2955899 1 A G 255 1.19 63 62 0 23 23 @GGgGGgGGGGGGgGgGGgGGGgG point 0 nongenic -457 upstream {H05B21.2} 4372 CB6890_redo V 3017813 1 A G 255 6.69 63 62 0 20 20 @GGGgGGggGgGggggggGGg point 0 nongenic 546 downstream {K12D9.14} 4385 CB6890_redo V 3188012 1 G C 46 1.00 63 52 2 8 10 @CCCCCCC.c. point 0 nongenic -336 upstream {Y73C8B.4} 163060 CB6890_redo V 3212652 53 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2462 to 2515 bp into {K08D9.3} 4391 CB6890_redo V 3216743 1 C T 255 1.00 63 62 0 24 24 @ttttTTTttttttTTtTTttttTT point 0 silent GTC->GTT[Val->Val] {K08D9.3} 4392 CB6890_redo V 3309147 1 C T 255 1.00 63 62 0 35 35 @TtttTttttTTTTtTTttTtTTtTTTtTTTttTTt point 0 missense GCG->GTG[Ala->Val] {F35F10.2} 4393 CB6890_redo V 3568979 1 G T 173 4.88 63 62 0 9 9 @TTTTTTTTt point 0 nongenic,nongenic -1189 upstream,-3522 upstream {F40C5.2},{T24A6.17} 4395 CB6890_redo V 3589378 1 C T 255 1.00 63 62 0 36 36 @tGGtGtTtTTTttGtttTGttttGtGtttTtttTTT point 0 missense GCT->ACT[Ala->Thr] {T22F3.12} 4396 CB6890_redo V 3636677 1 G A 255 1.00 63 62 0 32 32 @AAaAaaAAAaAAaaAAAaAAaaaAaAAaAAAA point 0 missense TCG->TTG[Ser->Leu] {F59B1.7} 4401 CB6890_redo V 3733084 1 A T 12 1.00 63 0 0 4 4 @tttt point 0 nongenic,nongenic -1328 upstream,45 downstream {T27C4.2},{Y39H10A.4} 4404 CB6890_redo V 3788196 1 C T 255 1.00 63 62 0 16 16 @TTTtTTTtttTtTTtt point 0 nongenic,nongenic -1922 upstream,-3537 upstream {R08F11.7},{R08F11.1} 4405 CB6890_redo V 4017766 1 T A 255 1.00 63 62 0 17 17 @ACAaAAaAaAAaaAaAA point 0 nongenic,nongenic -1706 upstream,702 into {K09D9.3},{K09D9.13} 4414 CB6890_redo V 4139272 1 C A 7 1.00 63 62 6 7 13 @aaAaAAA,.,... point 0 nongenic,nongenic -145 upstream,461 downstream {Y45G5AL.2},{T05B4.1} 4415 CB6890_redo V 4164869 1 A C 255 1.00 63 62 0 17 17 @CCccCCccCCCCCcccc point 0 missense ATT->CTT[Ile->Leu] {Y45G5AM.3} 4416 CB6890_redo V 4186545 1 A C 16 1.00 63 32 2 7 9 @,CCC,cccc point 0 nongenic,nongenic,nongenic,nongenic -625 upstream,-643 upstream,3220 into,4957 into {Y45G5AM.1a.1},{Y45G5AM.1a.2,Y45G5AM.1b.1,Y45G5AM.1b.2},{Y45G5AM.9b},{Y45G5AM.9a,Y45G5AM.9c} 4417 CB6890_redo V 4248539 1 T G 82 1.00 63 56 0 4 4 @GGGG point 0 nongenic,nongenic -6021 upstream,585 into {E03D2.4},{ZC142.1} 4419 CB6890_redo V 4296909 1 T A 98 1.00 63 62 5 9 14 @.,.,,AAAaaaAaA point 0 nongenic,nongenic,nongenic -3397 upstream,180 into,2768 into {F47D2.10b},{ZC132.3a},{ZC132.3b} 4420 CB6890_redo V 4321387 1 T A 10 1.00 63 6 3 4 7 @Aaa..,a point 0 nongenic,nongenic,nongenic -2060 upstream,-5728 upstream,954 into {ZC132.9},{D2063.1},{R02D1.1} 4422 CB6890_redo V 4329455 1 A C 255 1.00 63 62 0 26 26 @cCcCcCCCCCcCcCCccCCCccCccc point 0 SNP none {haw75410} 4423 CB6890_redo V 4343578 1 A C 254 5.00 63 62 0 13 13 @cCCCCCCCCCCCC point 0 nongenic,nongenic -2281 upstream,2154 into {D2063.3a.1},{F32D1.1} 4424 CB6890_redo V 4351933 1 T G 81 4.62 63 62 1 4 5 @gGgg. point 0 nongenic 2164 into {F32D1.3} 4428 CB6890_redo V 4447491 1 T C 3 1.00 63 0 1 5 6 @cc.ccg point 0 nongenic,nongenic -4415 upstream,3051 into {Y47D7A.16},{Y47D7A.14} 4429 CB6890_redo V 4447836 1 C G 178 1.25 63 62 0 8 8 @GGGGGGGG point 0 nongenic,nongenic -4760 upstream,2706 into {Y47D7A.16},{Y47D7A.14} 4430 CB6890_redo V 4479717 1 A T 3 2.00 0 2 6 10 16 @t,t,t,ttct,ttt,, point 0 nongenic 700 downstream {T08H10.4} 4431 CB6890_redo V 4522913 1 G T 255 1.00 63 62 0 34 34 @tttTtTTTttTttTtTTttTTtttttTtTTtttt point 0 nongenic,nongenic -30944 upstream,5246 into {Y61A9LA.12},{T28F12.3} 4432 CB6890_redo V 4553236 1 A T 22 1.19 63 62 4 6 10 @TTTTTT,,,. point 0 nongenic,nongenic -3958 upstream,-621 upstream {T28F12.3},{Y61A9LA.12} 6775 CB6890_redo V 4748665 0 X X -1000 -999.99 -1000 -1000 6 -4 2 @C,.,,,,c indel 3 nongenic,nongenic -1901 upstream,589 downstream {C18G1.6.1},{C18G1.7} 163061 CB6890_redo V 4909254 75 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 397 to 472 bp into {H23N18.1} 163062 CB6890_redo V 5084652 66 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered codon 88 to codon 99 (1 % of 905 codons) {Y58A7A.4} 4442 CB6890_redo V 5084723 1 A T 82 2.00 63 4 0 6 6 @tTTTtt point 0 nongenic,nongenic -3841 upstream,270 into {Y58A7A.3},{Y58A7A.4} 4443 CB6890_redo V 5084742 1 G A 174 2.00 63 62 0 14 14 @aAAAaaAaAAAaaA point 0 missense CCG->CTG[Pro->Leu] {Y58A7A.4} 4444 CB6890_redo V 5084780 1 A G 201 2.00 63 62 0 22 22 @GGggGgggGggGgggGGgGgGG point 0 silent GAT->GAC[Asp->Asp] {Y58A7A.4} 4445 CB6890_redo V 5084791 1 C A 186 2.00 63 62 0 21 21 @AaaaAaaAaaaAAaAaAAaAa point 0 missense GCA->TCA[Ala->Ser] {Y58A7A.4} 4446 CB6890_redo V 5124308 1 T C 253 9.06 63 62 0 14 14 @CCCCCCCCCCCcCC point 0 nongenic,nongenic,nongenic -2769 upstream,-5113 upstream,2591 into {F14F9.5},{C04F5.9},{C04F5.1} 4447 CB6890_redo V 5124714 1 T A 255 1.00 63 62 0 28 28 @AAaAaAAaaaaAaAAAaaAAAAAAaAAA point 0 SNP none {haw76186} 4448 CB6890_redo V 5162301 1 C G 6 1.00 63 62 2 3 5 @gGG.. point 0 nongenic -423 upstream {C03A7.7} 4453 CB6890_redo V 5284688 1 T C 255 4.06 63 62 13 180 193 @C...,C,c.,cCCC.CCcCCCCCCCCCCCCC,CCcccccCCCCCCCccccccccccCCCCCCCcccc.cccCCC,CCCCCCCcccccccccccccccCC point 0 nongenic -6602 upstream {B0238.9} 4458 CB6890_redo V 5574426 1 T G 31 1.19 63 58 2 5 7 @GGGG.G. point 0 nongenic,nongenic -3908 upstream,967 downstream {C18C4.9},{C18C4.10d.1} 4464 CB6890_redo V 5755509 1 G T 50 1.00 63 62 3 6 9 @..tttttt. point 0 missense CAG->AAG[Gln->Lys] {K09H11.11} 6780 CB6890_redo V 5845360 0 X X -1000 -999.99 -1000 -1000 2 -1 1 @,,ac indel 5 nongenic,nongenic,nongenic -343 downstream,-345 downstream,-899 upstream {F26F12.3a.2,F26F12.3b},{F26F12.3a.1},{F26F12.3c.1} 4475 CB6890_redo V 6048318 1 C A 255 1.00 63 62 0 44 44 @aaaAaaAaaAAAaaaaaAaaaAAAaaAaaAAAAAaAAaaaaAAa point 0 SNP,three_prime_UTR none,none {haw77329},{R01B10.5.1} 4476 CB6890_redo V 6052074 1 T C 255 1.00 63 62 0 34 34 @cCCCccCcccCCCccCCCCcCCCCccCcCCcCCC point 0 SNP none {haw77333} 4496 CB6890_redo V 6089692 1 A T 16 5.56 0 16 0 9 9 @ttttttttt point 0 nongenic,nongenic -19640 upstream,-6318 upstream {Y38A10A.4},{Y38A10A.7} 4506 CB6890_redo V 6172858 1 T C 3 3.69 12 10 4 40 44 @C.C,CC.CcCCcCCCCCCCCCccCCCCCC,CCCCCcCCCCcCCC point 0 silent CAA->CAG[Gln->Gln] {W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g} 4510 CB6890_redo V 6177079 1 C A 88 3.25 37 50 4 7 11 @aaaaaaa.... point 0 silent GTG->GTT[Val->Val] {W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g} 4511 CB6890_redo V 6179154 1 C T 3 6.56 0 2 6 11 17 @..T,TtTTTTTT..TT. point 0 missense GCA->ACA[Ala->Thr] {W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g} 4512 CB6890_redo V 6179156 1 A T 3 5.62 0 2 5 12 17 @.T,TtTTTTTT..TT.T point 0 missense CTT->CAT[Leu->His] {W06H8.8d,W06H8.8e.1,W06H8.8e.2,W06H8.8f,W06H8.8g} 4513 CB6890_redo V 6302463 1 A G 255 1.44 63 62 0 43 43 @ggggggggGggGgGggGgGGggggggGgGgggGgGGgGggGgg point 0 nongenic,nongenic -1318 upstream,-3026 upstream {K12B6.1},{K12B6.7} 4514 CB6890_redo V 6781548 1 C T 109 1.00 63 62 4 10 14 @TTTttTTTTT.,,. point 0 nongenic -1864 upstream {ZC404.7} 4515 CB6890_redo V 6781550 1 A C 87 1.00 63 62 4 9 13 @CCccCCCCC.,,. point 0 nongenic -1866 upstream {ZC404.7} 4516 CB6890_redo V 6826404 1 T A 255 1.00 63 62 0 26 26 @aAAAAaaaAAAaAaAAAAAaaaaaaA point 0 nongenic,nongenic,nongenic -171 upstream,453 downstream,724 downstream {T15B7.6},{T15B7.7},{T15B7.13} 6781 CB6890_redo V 6865466 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @.,,,Gg indel 0 nongenic,nongenic -10679 upstream,-4826 upstream {C55H1.2},{T19F4.1a,T19F4.1b} 4517 CB6890_redo V 6889636 1 C G 255 1.00 63 62 0 13 13 @GGggGgggGgGGG point 0 silent GCC->GCG[Ala->Ala] {K11C4.3b} 4518 CB6890_redo V 6889637 1 G C 239 1.00 63 62 2 11 13 @,Ccc,cccCcCCC point 0 missense GCA->CCA[Ala->Pro] {K11C4.3b} 4521 CB6890_redo V 6941197 1 T C 3 6.81 0 0 13 59 72 @C.CCCc,CCcCCcccCcc,Ccccc,cCcCCCCCC,,cCCCCcC,cc,CCcCCccc,ccccCcCcc..c.cc, point 0 nongenic -5353 upstream {Y57E12B.3} 4525 CB6890_redo V 6942940 1 A G 3 7.19 34 2 14 65 79 @,.gggGgGGggG,gGgggGG,G.g,gGggg,GGggg.g.GGggg,gggggGgggGGggg,gG,gg.GggGGGGgg,GGg point 0 nongenic -7096 upstream {Y57E12B.3} 4529 CB6890_redo V 6956711 1 T C 228 1.00 63 62 0 9 9 @CCCCCcccc point 0 five_prime_UTR,missense none,CTA->CCA[Leu->Pro] {T07H8.4f.2,T07H8.4f.3},{T07H8.4a,T07H8.4b,T07H8.4c,T07H8.4d.1,T07H8.4d.2,T07H8.4h.1,T07H8.4h.2,T07H8.4i,T07H8.4j} 4530 CB6890_redo V 6956743 1 C G 255 1.00 63 62 0 12 12 @gGGGgGGggggG point 0 five_prime_UTR,missense none,CGC->GGC[Arg->Gly] {T07H8.4f.1,T07H8.4f.2,T07H8.4f.3},{T07H8.4a,T07H8.4b,T07H8.4c,T07H8.4d.1,T07H8.4d.2,T07H8.4h.1,T07H8.4h.2,T07H8.4i,T07H8.4j} 4531 CB6890_redo V 6956744 1 G C 255 1.00 63 62 0 12 12 @cACCcCCccccC point 0 five_prime_UTR,missense none,CGC->CCC[Arg->Pro] {T07H8.4f.1,T07H8.4f.2,T07H8.4f.3},{T07H8.4a,T07H8.4b,T07H8.4c,T07H8.4d.1,T07H8.4d.2,T07H8.4h.1,T07H8.4h.2,T07H8.4i,T07H8.4j} 6782 CB6890_redo V 6972719 5 X X -1000 -999.99 -1000 -1000 4 -3 1 @,..,Tt indel -5 nongenic,nongenic,nongenic -2609 upstream,-3605 upstream,413 into {T07H8.6},{T07H8.1},{T07H8.3} 4535 CB6890_redo V 7205627 1 G C 117 1.00 63 62 0 4 4 @CCCc point 0 three_prime_UTR none {C13F10.4} 4536 CB6890_redo V 7205628 1 C A 75 1.00 63 62 1 4 5 @AAAa, point 0 three_prime_UTR none {C13F10.4} 4537 CB6890_redo V 7245105 1 C G 255 1.00 63 62 0 41 41 @gGggGGggGgGGGGgGggGGGGGGGgGgggggtgGgGGgGg point 0 SNP none {haw78505} 4540 CB6890_redo V 7403427 1 A G 255 1.00 63 62 0 28 28 @GggGgggGGGgGGGGGgGGgGgGggGGG point 0 silent,SNP GAA->GAG[Glu->Glu],none {R13D7.3},{uCE5-1535} 4547 CB6890_redo V 7472782 1 C A 255 1.00 63 62 0 31 31 @aAaAAAAAaaAaaaAAaAAaAAaaAAAAAaa point 0 missense GCT->TCT[Ala->Ser] {F25E5.12} 4548 CB6890_redo V 7546600 1 G A 255 1.00 63 62 0 28 28 @aaaAAAaaaAAAAAAaaaaAaAAAaAaa point 0 missense,SNP CAC->TAC[His->Tyr],none {C54F6.14},{uCE5-1545} 6785 CB6890_redo V 7725861 0 X X -1000 -999.99 -1000 -1000 5 -2 3 @..,.,Ttt indel 0 nongenic,nongenic,nongenic -1814 upstream,-231 downstream,-2933 upstream {ZK105.6},{ZK105.8},{Y97E10C.1.1} 4551 CB6890_redo V 7860214 1 C A 241 3.00 63 62 0 24 24 @aaAaaaaaaaaaaaaaaaaaaaaa point 0 nongenic,nongenic 323 downstream,510 downstream {C37C3.1a},{C37C3.1b} 4552 CB6890_redo V 7860248 1 A T 255 3.12 63 62 0 25 25 @tttttttttttttttttTtTTTTtt point 0 nongenic,nongenic 357 downstream,544 downstream {C37C3.1a},{C37C3.1b} 4553 CB6890_redo V 7891928 1 T A 15 1.00 63 0 1 3 4 @,AAA point 0 nongenic,nongenic 307 downstream,418 into {F40A3.6},{F40A3.1} 4566 CB6890_redo V 8056170 1 G T 218 5.44 63 62 0 9 9 @ttttttTTt point 0 nongenic,nongenic -235 upstream,165 downstream {ZC513.1},{ZC513.2} 4569 CB6890_redo V 8315131 1 G C 4 3.00 63 0 2 6 8 @,C.CCCCc point 0 nongenic -3282 upstream {W02D7.10} 4575 CB6890_redo V 8351907 1 A T 255 1.00 63 62 0 43 43 @ttTTttttTttTTTttTTTTtTTTttTTttTttTttttttttt point 0 nongenic,nongenic -4059 upstream,258 into {F38E1.7},{F38E1.8} 4578 CB6890_redo V 8616038 1 G C 255 1.00 63 62 0 20 20 @CCCCcCcCcCCCcccCCcCc point 0 nongenic,nongenic -2970 upstream,981 downstream {F41E6.2},{F41E6.4a,F41E6.4b} 4579 CB6890_redo V 8619112 1 T G 255 1.00 63 62 0 28 28 @ggGgGGgGGGGGGGgGGGgGgGGggGgg point 0 nongenic,nongenic 104 into,888 downstream {F41E6.2},{F41E6.11} 4580 CB6890_redo V 8684693 1 T C 3 1.38 63 28 1 9 10 @CCCCCC,CCC point 0 nongenic,nongenic 1341 into,1424 into {ZC190.1.2},{ZC190.1.1} 4581 CB6890_redo V 8697873 1 T G 39 1.00 63 48 0 5 5 @GGGGG point 0 nongenic,nongenic -1375 upstream,-3535 upstream {ZC190.10},{ZC178.1} 4583 CB6890_redo V 8751076 1 G A 88 4.19 63 30 2 4 6 @.,aaaA point 0 nongenic,nongenic -2595 upstream,1968 into {B0507.5},{B0507.6} 4592 CB6890_redo V 9007892 1 T A 53 1.00 63 62 2 4 6 @aAAA,, point 0 nongenic,nongenic -1559 upstream,985 downstream {R03H4.2},{R03H4.3} 4593 CB6890_redo V 9113930 1 A G 76 1.00 63 36 2 6 8 @,.gGgggg point 0 nongenic,nongenic -9533 upstream,1165 into {F21C10.11a},{F21C10.7} 4594 CB6890_redo V 9162494 1 T G 255 2.06 63 62 0 23 23 @GgGGGGGGgGgGgGGGGgGGGGg point 0 missense CAA->CCA[Gln->Pro] {B0222.7} 4602 CB6890_redo V 9376379 1 G T 255 1.00 63 62 0 25 25 @tTtTttTtTTTtTtTTTTTTTTTTT point 0 missense,SNP CAA->AAA[Gln->Lys],none {E02C12.10},{haw80948} 4606 CB6890_redo V 9426274 1 A C 12 1.00 63 0 0 4 4 @cccc point 0 nongenic,nongenic,nongenic -538 upstream,-584 upstream,550 downstream {F36D4.5b.1},{F36D4.5a},{F36D4.6} 4611 CB6890_redo V 9603798 1 A G 205 3.31 63 62 1 12 13 @.ggGggGgggggg point 0 nongenic,nongenic -4736 upstream,-6258 upstream {K09G1.4a,K09G1.4b},{K09G1.3} 4614 CB6890_redo V 9662867 1 T C 158 1.00 63 62 0 6 6 @ccCCCC point 0 nongenic,nongenic -1279 upstream,-3805 upstream {B0331.2},{ZK287.1} 4618 CB6890_redo V 9663159 1 T G 255 1.00 63 62 0 20 20 @GGGGGGGGgGGgGGgggGGg point 0 SNP none {haw81125} 4619 CB6890_redo V 9707449 1 T C 255 1.00 63 62 0 36 36 @CCCcCCCccccCCcCcCcCcccCCCCCcccCcCcCc point 0 SNP none {haw81144} 4622 CB6890_redo V 9750975 1 C A 116 1.00 63 62 1 5 6 @,Aaaaa point 0 nongenic -595 upstream {F58E6.4} 4629 CB6890_redo V 9798856 1 A C 255 1.00 63 62 0 36 36 @CCccccCCCCcCCcCCccCCCccCCCcCCCcCcCcc point 0 SNP none {haw81158} 4631 CB6890_redo V 9927293 1 T A 255 1.00 63 62 0 37 37 @AAAAAaaaAaAaaaAaAAAaaaaaAaAaaAAAAAaaA point 0 SNP none {haw81196} 4632 CB6890_redo V 9928614 1 C T 255 1.00 63 62 0 33 33 @TTTtttTTTTTTTTTTTtttTTTtTtTTtTttt point 0 silent,SNP CAG->CAA[Gln->Gln],none {T07C12.12},{haw81197} 4633 CB6890_redo V 9951788 1 C A 255 1.00 63 62 0 37 37 @AaaAaaaAaaaAAAaaAaaAaAAaaAAAaAaaaAaAa point 0 silent ATC->ATA[Ile->Ile] {T07C12.7} 4635 CB6890_redo V 10067797 1 A C 24 1.00 63 62 7 9 16 @,,..,..ccccCcccC point 0 nongenic 739 into {F57A8.4} 4636 CB6890_redo V 10164057 1 T C 58 1.00 63 62 1 4 5 @,CcCc point 0 nongenic,nongenic -3008 upstream,173 downstream {C51E3.10},{C51E3.6} 4637 CB6890_redo V 10164059 1 C G 136 1.00 63 58 1 5 6 @,GgGgg point 0 nongenic,nongenic -3010 upstream,171 downstream {C51E3.10},{C51E3.6} 4638 CB6890_redo V 10230415 1 C G 78 1.19 63 14 3 4 7 @GgGg,,. point 0 nongenic,nongenic -822 upstream,310 downstream {C12D8.17},{C12D8.16} 4639 CB6890_redo V 10230416 1 A C 14 1.12 63 62 4 4 8 @CcCc,,., point 0 nongenic,nongenic -821 upstream,311 downstream {C12D8.17},{C12D8.16} 4646 CB6890_redo V 10269855 1 C G 3 6.75 63 0 3 5 8 @,.gg.ggg point 0 nongenic,nongenic,nongenic -7220 upstream,-7942 upstream,431 into {Y22F5A.3b},{Y22F5A.4.1},{Y22F5A.3a} 4647 CB6890_redo V 10269857 1 C G 6 5.62 63 2 1 9 10 @G.gggggggg point 0 nongenic,nongenic,nongenic -7222 upstream,-7940 upstream,429 into {Y22F5A.3b},{Y22F5A.4.1},{Y22F5A.3a} 4648 CB6890_redo V 10397712 1 C A 255 1.00 63 62 0 35 35 @aaAAaaaaaAaAaaaaaAAAAAAAaaaAAAaAAaa point 0 SNP none {haw81401} 4650 CB6890_redo V 10449487 1 T C 252 6.44 63 62 27 92 119 @CcCCCcccCccc.CC,C.c.cccC.C,CCCcc.CcCcc,.C,..Ccc.C.cCccc.cCC..CC..CCCCCCCccCCcCCCCcCCCcccccC.cCCcCCC point 0 nongenic 386 downstream {Y32F6A.6} 4652 CB6890_redo V 10449934 1 A G 12 9.50 0 8 0 22 22 @GGGgGGGGGGGGGGGGGGGGGG point 0 nongenic 833 downstream {Y32F6A.6} 4653 CB6890_redo V 10548754 1 G T 137 1.00 63 62 1 6 7 @tTttTt, point 0 missense CCC->ACC[Pro->Thr] {F32G8.1} 4654 CB6890_redo V 10548755 1 T A 145 1.00 63 62 1 6 7 @aAaaAa, point 0 missense TTA->TTT[Leu->Phe] {F32G8.1} 4655 CB6890_redo V 10598995 1 C T 165 1.00 63 8 4 10 14 @,,,,ttTTTttTtT point 0 nongenic,nongenic -84 upstream,355 downstream {T21C9.12},{T21C9.13} 4658 CB6890_redo V 10621928 1 C A 255 1.00 63 62 0 35 35 @aAaaaAaaAaaaaaaaaaAAaaAaaAAaAaAAAaA point 0 SNP none {haw81482} 4659 CB6890_redo V 10696346 1 A T 81 1.00 63 62 0 7 7 @ccCtttt point 0 nongenic -6178 upstream {C05A2.1} 4660 CB6890_redo V 10866472 1 G A 157 1.94 63 62 10 18 28 @,,,a,,aA,a,AAAaa,,a,aAaaAaAa point 0 nongenic,nongenic -14381 upstream,-702 upstream {F32D8.1},{F53H10.2a} 4661 CB6890_redo V 10893331 1 A C 255 1.00 63 62 0 44 44 @cCccccccccCCcCcccCccccCCccCcCCcCCCCCCcCcCCCc point 0 SNP none {haw81672} 4662 CB6890_redo V 11025875 1 T A 112 1.00 63 62 0 8 8 @aAaAAAAa point 0 SNP none {haw81781} 4668 CB6890_redo V 11057843 1 A C 18 1.00 63 62 2 16 18 @.TTcCc.ccccccccccc point 0 nongenic,nongenic -721 upstream,780 downstream {T04C12.2a,T04C12.2b},{T04C12.1} 4669 CB6890_redo V 11180409 1 G A 255 1.00 63 62 0 26 26 @AaaAaAAAaAaAAAaAAaAaaaaaAA point 0 SNP none {haw81856} 4670 CB6890_redo V 11186962 1 A T 255 1.00 63 62 0 37 37 @ttTtttTTtTtTtTtTttTTtTtTTTtttTTttttTt point 0 nongenic -4296 upstream {K10D6.1.1} 4671 CB6890_redo V 11380978 1 C T 255 1.00 63 62 0 29 29 @ttTttTtTtTttttTTTtttTttTTttTt point 0 nongenic -2109 upstream {F55C10.5} 4677 CB6890_redo V 11687322 1 C T 255 1.00 63 62 1 22 23 @TTtTTTTTtt,TTTTttTtTTTt point 0 SNP none {haw82144} 4678 CB6890_redo V 11707277 1 C G 255 1.00 63 62 0 34 34 @GgGGggGGgGGGGGGgGggGggGgGGgGGgGgGg point 0 nongenic -1896 upstream {W05E10.3.1} 4680 CB6890_redo V 11816342 1 A C 218 9.75 63 62 0 8 8 @ccCCCCCC point 0 nongenic -10411 upstream {D2023.3} 4681 CB6890_redo V 11883417 1 A G 255 1.00 63 62 0 31 31 @ggGGGGGGGGGGGGGGGGGGGggggGgggGG point 0 SNP none {haw82276} 4685 CB6890_redo V 12024415 1 G C 4 1.00 63 56 3 5 8 @,CCCCC., point 0 nongenic,nongenic -276 upstream,836 downstream {F57F5.5},{F10C2.3} 4693 CB6890_redo V 12579466 1 G T 255 1.00 63 62 0 34 34 @tTtTtttTtttTTttTttTTTtttTTTtTTTTtt point 0 SNP none {haw83048} 4694 CB6890_redo V 12864064 1 A T 255 1.00 63 62 0 37 37 @ttttTTTtttttTtttttTtTTtTTTTTttTtTTTTT point 0 nongenic,nongenic,nongenic,nongenic -1829 upstream,251 downstream,300 into,558 downstream {T07F10.5},{T07F10.1a},{T07F10.6},{T07F10.1b} 4695 CB6890_redo V 12864636 1 A G 91 1.69 63 62 7 21 28 @GGG.GGGGGGGGGG....G..GGGGGGG point 0 nongenic,nongenic,nongenic -1257 upstream,823 downstream,872 into {T07F10.5},{T07F10.1a},{T07F10.6} 4696 CB6890_redo V 12864640 1 C G 80 1.38 63 62 7 19 26 @.GGGGGGGGGG....G..GGGGGGGG point 0 nongenic,nongenic,nongenic -1253 upstream,827 downstream,876 into {T07F10.5},{T07F10.1a},{T07F10.6} 4698 CB6890_redo V 12893332 1 C A 255 1.00 63 62 0 31 31 @AAaAAAAAaAaAaaAaAaaAAAAAaaAaaaa point 0 missense GGA->GTA[Gly->Val] {R90.1} 4699 CB6890_redo V 12915568 1 A T 255 1.00 63 62 0 32 32 @tTTTTtttttTTtttTTtTTTTttTTttTttt point 0 SNP none {haw83378} 4700 CB6890_redo V 12919477 1 A G 255 1.00 63 62 0 29 29 @GgGGGGGgGGGgGGGgGGGgGGGGGGGgG point 0 SNP none {haw83380} 4701 CB6890_redo V 13134219 1 G C 255 1.00 63 62 0 36 36 @CCCCCccCcccCcccCcCcCCCCcCcCCCCCCCCCC point 0 missense CAG->GAG[Gln->Glu] {B0365.5a} 6809 CB6890_redo V 13150206 0 X X -1000 -999.99 -1000 -1000 2 2 4 @..Aaa indel 0 inframe none {B0365.7} 4702 CB6890_redo V 13183407 1 A T 76 1.19 63 62 0 9 9 @ggggTTttt point 0 nongenic,nongenic -2258 upstream,813 into {T09E8.5},{T09E8.4} 4705 CB6890_redo V 13466076 1 G A 255 1.00 63 62 0 33 33 @aaAaaaaAaaaaaAAAAAAAaAAAaAAAaaAAA point 0 SNP none {haw83625} 4706 CB6890_redo V 13506485 1 T A 84 1.00 63 62 1 4 5 @.AAAA point 0 nongenic,nongenic,nongenic -3759 upstream,283 into,5216 into {R11G10.1b.1},{R11G10.4},{R11G10.1a} 4707 CB6890_redo V 13506487 1 C T 164 1.00 63 62 0 5 5 @TTTTt point 0 nongenic,nongenic,nongenic -3761 upstream,281 into,5214 into {R11G10.1b.1},{R11G10.4},{R11G10.1a} 4708 CB6890_redo V 13506612 1 T C 7 1.00 63 60 2 3 5 @,,ccc point 0 missense TCT->CCT[Ser->Pro] {R11G10.4} 4709 CB6890_redo V 13506613 1 C T 96 1.00 63 6 0 6 6 @tttTTT point 0 missense TCT->TTT[Ser->Phe] {R11G10.4} 4711 CB6890_redo V 13539850 1 G T 255 1.00 63 62 0 16 16 @TTTTTTTtttTTTTTT point 0 SNP none {haw83676} 4712 CB6890_redo V 13640845 1 C T 18 6.69 0 16 0 6 6 @TTtTTt point 0 nongenic -6641 upstream {H37A05.2} 4729 CB6890_redo V 13645955 1 T C 255 1.00 63 62 6 35 41 @ccccccCCccCccCCcCc,ccC,,cCcCcCCCC,,CCCC,C point 0 SNP none {haw83752} 4730 CB6890_redo V 13646003 1 A C 30 1.19 63 62 32 42 74 @,CCC.CC.CCC,C.C,c.C,CCC.,c.CCccc,CCcCc.cc....cCc.,,,,,CCCCcc,C,,.,Ccc,..,C point 0 nongenic,nongenic -11799 upstream,863 downstream {H37A05.2},{H37A05.4} 4731 CB6890_redo V 13647341 1 A G 55 1.00 63 62 4 9 13 @..,.GgGGGGgGt point 0 nongenic,nongenic -13137 upstream,475 into {H37A05.2},{H37A05.4} 4732 CB6890_redo V 13665874 1 T A 98 1.00 63 10 1 4 5 @aAAa, point 0 nongenic,splice_donor 491 into,none {F58G11.2},{F58G11.2} 4733 CB6890_redo V 13665876 1 C T 10 1.00 63 62 3 3 6 @TTt,,. point 0 missense ACC->ATC[Thr->Ile] {F58G11.2} 4734 CB6890_redo V 13706741 1 A G 105 1.00 63 18 1 5 6 @,GgGgG point 0 nongenic,nongenic,nongenic,nongenic,nongenic -4599 upstream,1333 into,1731 into,1831 into,601 into {T01D3.4},{T01D3.3a},{T01D3.3b.2},{T01D3.3b.1},{T01D3.2} 4735 CB6890_redo V 13717171 1 T C 255 1.00 63 62 0 26 26 @CcccccCCcCcccCccccCCcCcCcc point 0 SNP none {haw83786} 4744 CB6890_redo V 13774969 1 A C 27 1.19 63 4 1 4 5 @,cCcc point 0 nongenic -761 upstream {F53C11.1} 4745 CB6890_redo V 13886659 1 T C 255 1.00 63 62 0 40 40 @cCCCcccCcCCCCCCcCccCccccccccCcCCccccCCCc point 0 SNP none {haw83916} 4746 CB6890_redo V 13888688 1 A G 255 1.00 63 62 0 34 34 @gGGGGGggGgGGGGgGgGgggGGGGgGgGggGGg point 0 SNP none {haw83918} 4747 CB6890_redo V 13931064 1 A T 255 1.00 63 62 0 35 35 @tTtTTTtTTTtTTTTtttTTTTTTttTTTtTtTTT point 0 missense,SNP TTA->TTT[Leu->Phe],none {C06B3.14},{haw83931} 4753 CB6890_redo V 14126931 1 G C 26 1.00 63 62 3 5 8 @CCCCA.., point 0 nongenic,nongenic,nongenic,nongenic -413 upstream,14151 into,2034 into,5403 into {H39E23.1d},{H39E23.1a},{H39E23.1c},{H39E23.1b} 4757 CB6890_redo V 14392847 1 T C 255 1.00 63 62 0 45 45 @CcCCCcCcCCcCCCCCcCcccccCCCCCCccccccCCCCccccCC point 0 nongenic,nongenic -989 upstream,95 downstream {C15H11.1},{C15H11.10} 4758 CB6890_redo V 14486410 1 A T 255 1.00 63 62 0 46 46 @TTTttttttTttTtTtTtTTtTtTTtTTttTtttttTTTttTtttt point 0 SNP none {haw84369,snp_R02D5[2]} 4759 CB6890_redo V 14524337 1 C G 52 1.00 63 26 0 4 4 @GGGG point 0 nongenic,nongenic,nongenic -1028 upstream,-227 upstream,-228 upstream {C53A5.3.1},{C53A5.1.1},{C53A5.1.3} 4760 CB6890_redo V 14524338 1 G C 30 1.00 63 16 0 4 4 @CCCC point 0 nongenic,nongenic,nongenic -1027 upstream,-228 upstream,-229 upstream {C53A5.3.1},{C53A5.1.1},{C53A5.1.3} 4774 CB6890_redo V 14733448 1 G C 255 1.00 63 62 0 35 35 @CccCCccccccCcccccccccCCCcCCccCCcCcC point 0 missense CTT->GTT[Leu->Val] {Y50E8A.4a,Y50E8A.4b,Y50E8A.4c} 4778 CB6890_redo V 14743838 1 T C 191 1.25 63 62 0 8 8 @CCCcCcCC point 0 nongenic -2532 upstream {Y50E8A.6} 4782 CB6890_redo V 14744257 1 T G 3 3.12 0 2 3 5 8 @GG,,GGG. point 0 nongenic -2951 upstream {Y50E8A.6} 4784 CB6890_redo V 14744337 1 G C 165 2.06 40 62 0 13 13 @CCCCcccCCCCcC point 0 nongenic -3031 upstream {Y50E8A.6} 4786 CB6890_redo V 14744882 1 A C 113 1.00 63 62 4 11 15 @cccCcCcccCc.,,, point 0 nongenic,nongenic -3576 upstream,780 downstream {Y50E8A.6},{Y50E8A.7} 4787 CB6890_redo V 14744895 1 T A 57 1.00 63 62 3 6 9 @.,.aAAAAA point 0 nongenic,nongenic -3589 upstream,767 downstream {Y50E8A.6},{Y50E8A.7} 4788 CB6890_redo V 14745023 1 C G 83 1.00 63 62 10 11 21 @,,,Gggg,,,G,G,G,,GgGg point 0 nongenic,nongenic -3717 upstream,639 downstream {Y50E8A.6},{Y50E8A.7} 4799 CB6890_redo V 14755448 1 T A 15 5.00 0 14 0 7 7 @aaaaaaa point 0 nongenic,nongenic -17887 upstream,-5011 upstream {Y50E8A.16},{Y50E8A.17} 4829 CB6890_redo V 14997174 1 C A 255 1.00 63 62 0 24 24 @AaAaAAAAaAAaAaaaAAaAAaAA point 0 missense CAA->AAA[Gln->Lys] {T01C3.5} 4830 CB6890_redo V 15101079 1 T C 255 1.00 63 62 0 28 28 @CCCCCcCcCCCCCCCCcccCCccCcCCc point 0 missense TCT->CCT[Ser->Pro] {C01G10.1} 4831 CB6890_redo V 15294614 1 G C 35 6.00 63 20 0 5 5 @CCCCc point 0 nongenic -671 upstream {T10H4.2} 4832 CB6890_redo V 15294616 1 G C 21 6.00 63 12 1 4 5 @CCC,c point 0 nongenic -673 upstream {T10H4.2} 4833 CB6890_redo V 15294619 1 T C 12 6.00 63 2 0 5 5 @CCCCg point 0 nongenic -676 upstream {T10H4.2} 4841 CB6890_redo V 15434045 1 G A 53 1.50 63 62 22 33 55 @AA,.AAAa,,A,A,,aAA.AAAAA,,,AAAAAAAA,,,A,A,A,..,Aa,,aAAA point 0 nongenic -1501 upstream {T26H5.8} 4842 CB6890_redo V 15434980 1 G C 55 1.00 63 62 46 84 130 @c,Ccc.cc.,,,cC,,cCCC,C,.cccCcccccc.,C,c,Cc.cC.c.C,Cc.cCC,ccc,C,CccCc...CCccccccccc...cccccccc.cCC.. point 0 SNP none {haw85321} 4843 CB6890_redo V 15479200 1 C A 255 1.00 63 62 0 35 35 @AAAaaaAaAaaaAAAAaAAATAaaaAAaaaaaaAa point 0 SNP none {haw85361} 6820 CB6890_redo V 15527876 0 X X -1000 -999.99 -1000 -1000 1 1 2 @,Gg indel 0 nongenic,nongenic -1468 upstream,-5879 upstream {F21A3.1},{F21A3.8} 4851 CB6890_redo V 15581676 1 T C 255 1.25 63 62 0 29 29 @ccCccCcCCccCccCCCccCcCccCcccc point 0 nongenic,nongenic -3995 upstream,-854 upstream {B0391.10},{F28F8.7} 4852 CB6890_redo V 15581801 1 T C 255 1.00 63 62 0 16 16 @cCCcCCcccccCCCCC point 0 nongenic,nongenic -3870 upstream,-979 upstream {B0391.10},{F28F8.7} 4854 CB6890_redo V 16323553 1 C G 3 2.38 63 18 4 6 10 @,g.g.g.ggg point 0 nongenic,nongenic -5790 upstream,2783 into {F57G8.7},{F57G8.8} 4855 CB6890_redo V 16323555 1 C G 19 1.00 63 2 1 9 10 @agggggg.gg point 0 nongenic,nongenic -5788 upstream,2785 into {F57G8.7},{F57G8.8} 4856 CB6890_redo V 16420522 1 G A 255 1.00 63 62 0 29 29 @AaaAaAAAAAAaaAAAaAAAaAaAaAAAa point 0 SNP none {haw88457} 4857 CB6890_redo V 16431443 1 C T 255 1.00 63 62 0 34 34 @tTtttttttttTTttTTtTTTtTttTTTtTTtTT point 0 silent AAC->AAT[Asn->Asn] {F26D2.1} 6823 CB6890_redo V 16460134 1 X X -1000 -999.99 -1000 -1000 8 -3 5 @,,,,,,,, indel -1 SNP none {uCE5-2399} 4864 CB6890_redo V 16525286 1 C A 127 5.00 63 62 0 4 4 @AAAA point 0 nongenic,nongenic -1844 upstream,-3042 upstream {F36D3.8},{F36D3.13} 4867 CB6890_redo V 16526002 1 G C 255 4.31 63 62 0 52 52 @ccCccCCCccccCccccccccccCCCcccCccCCCCccCcccccCcCcccCc point 0 nongenic,nongenic -1128 upstream,-3758 upstream {F36D3.8},{F36D3.13} 6824 CB6890_redo V 16584111 0 X X -1000 -999.99 -1000 -1000 1 0 1 @.CCC indel 0 nongenic,nongenic -865 downstream,-962 upstream {T03E6.4},{T03E6.2} 4889 CB6890_redo V 16723977 1 T C 255 1.00 63 62 0 20 20 @CCCcCcCcCCcCcCCccCcC point 0 nongenic,nongenic -160 upstream,-3209 upstream {Y70C5C.6a,Y70C5C.6b},{T25E12.14} 4890 CB6890_redo V 16723993 1 G C 255 1.00 63 62 0 23 23 @aCcCCcCcCCccCcCCccCCcCC point 0 nongenic,nongenic -176 upstream,-3193 upstream {Y70C5C.6a,Y70C5C.6b},{T25E12.14} 4891 CB6890_redo V 16733914 1 A C 255 1.00 63 62 0 30 30 @CCcCCccCcCCCcCCCCCccCCcCCCccCc point 0 missense,SNP TTT->GTT[Phe->Val],none {T25E12.10},{haw89342,snp_T25E12[1]} 4892 CB6890_redo V 16758355 1 A T 255 1.00 63 62 0 27 27 @tTtTTTTtTTtTttTtTTttTtTttTt point 0 SNP none {haw89380} 4893 CB6890_redo V 16812189 1 C T 3 1.00 63 0 4 8 12 @,,T,TTTTTTT, point 0 nongenic,nongenic -3349 upstream,2351 into {T20B3.1},{Y102A5A.1} 4896 CB6890_redo V 16816476 1 T C 255 1.00 63 62 0 31 31 @CcCCccCccCCCCcCCcCCCCCcCCCCCCCC point 0 nongenic 938 into {T20B3.1} 4897 CB6890_redo V 16874737 1 C G 33 1.00 63 34 3 5 8 @gGGGg,., point 0 nongenic,nongenic,nongenic -1110 upstream,-3277 upstream,690 into {F49A5.10},{F49A5.6},{F49A5.8} 4901 CB6890_redo V 16993272 1 A T 255 1.00 63 62 0 36 36 @ttttTTTTttTtTTttTtttttTttttTTTtttttt point 0 nongenic,nongenic -4587 upstream,609 into {Y102A5C.27},{Y102A5C.33} 4903 CB6890_redo V 17022294 1 A G 3 1.75 63 2 1 3 4 @G,gg point 0 nongenic,nongenic -862 upstream,45 downstream {F49H6.12},{F49H6.8} 4905 CB6890_redo V 17040210 1 T C 89 6.50 63 48 0 4 4 @CCCC point 0 nongenic,nongenic -2351 upstream,-4289 upstream {F28B1.1},{F49H6.11} 4910 CB6890_redo V 17189488 1 C A 73 1.62 63 26 3 3 6 @.,.AAa point 0 nongenic 333 into {Y68A4A.3} 4922 CB6890_redo V 17378169 1 G A 255 1.00 63 62 0 31 31 @aAaaaaAAAAaaAaAAAaAAAAAAaaAAAAA point 0 SNP none {haw90646} 4929 CB6890_redo V 17619073 1 C G 255 1.06 63 62 0 33 33 @ggGggGGGGGgGgGGggGGgggggGgGgGgggg point 0 nongenic,nongenic -1088 upstream,-2183 upstream {Y6G8.8},{Y6G8.6} 4942 CB6890_redo V 17738078 1 A C 11 8.00 0 8 0 19 19 @CCCCCCCCCCCCCCCCCCC point 0 nongenic,nongenic -7728 upstream,1783 into {W06D12.2},{W06D12.1} 4943 CB6890_redo V 17738120 1 T C 16 5.50 0 16 0 8 8 @CCCCCCCC point 0 nongenic,nongenic -7770 upstream,1741 into {W06D12.2},{W06D12.1} 4945 CB6890_redo V 17738184 1 T C 15 6.56 0 14 0 13 13 @CCCCCCCCCCCCC point 0 nongenic,nongenic -7834 upstream,1677 into {W06D12.2},{W06D12.1} 4946 CB6890_redo V 17738206 1 T C 69 7.44 63 38 0 18 18 @CCCCCCCCCCCCCCCCCC point 0 nongenic,nongenic -7856 upstream,1655 into {W06D12.2},{W06D12.1} 4947 CB6890_redo V 17738238 1 T C 199 9.62 63 62 0 25 25 @CCCCCCCCCCCCcCCCCcCcCCCCc point 0 nongenic,nongenic -7888 upstream,1623 into {W06D12.2},{W06D12.1} 4949 CB6890_redo V 17781031 1 A G 3 6.69 63 0 1 12 13 @GG,GGGGGGGGGt point 0 nongenic,nongenic -9427 upstream,616 into {C47A10.11},{C47A10.6} 4950 CB6890_redo V 17844031 1 G A 255 1.00 63 62 0 17 17 @AAAaaAAaAAAaAaAaa point 0 silent AGC->AGT[Ser->Ser] {Y59A8A.4} 4951 CB6890_redo V 17844032 1 C T 255 1.00 63 62 0 17 17 @TTTttTTtTTTtTtTtt point 0 missense AGC->AAC[Ser->Asn] {Y59A8A.4} 4952 CB6890_redo V 17867118 1 T G 255 1.12 63 62 0 16 16 @gggGggGggGggGgGg point 0 nongenic,nongenic,nongenic -11158 upstream,-4254 upstream,3502 into {Y59A8A.3.1},{Y59A8A.2},{Y59A8A.1} 4953 CB6890_redo V 17867263 1 A G 26 1.75 50 42 2 2 4 @,,gg point 0 nongenic,nongenic,nongenic -11303 upstream,-4109 upstream,3357 into {Y59A8A.3.1},{Y59A8A.2},{Y59A8A.1} 4963 CB6890_redo V 17885895 1 A G 3 4.12 0 20 3 6 9 @,.GG.GGGG point 0 nongenic 3058 into {C06H5.6} 163076 CB6890_redo V 17885990 63 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 2900 to 2963 bp into {C06H5.6} 4971 CB6890_redo V 17898272 1 G A 255 4.94 63 62 0 27 27 @AAAAAaAAaAaAaaaaaAAaAAAAAAa point 0 nongenic,nongenic -1517 upstream,-1523 upstream {C06H5.1},{C06H5.2} 4982 CB6890_redo V 17950254 1 T A 255 1.00 63 62 0 25 25 @AAAaaaaAAAAAAAAAAAAAAAAaa point 0 SNP none {haw91922} 4984 CB6890_redo V 17961088 1 T A 255 2.31 63 62 0 26 26 @AaAAAaaAAAaAAAaaAAAaAAAAaa point 0 nongenic 5728 into {Y59A8B.23a,Y59A8B.23b} 4985 CB6890_redo V 17972070 1 G T 255 1.25 63 62 4 17 21 @t,t,,Tt,tTtttTttTTTtT point 0 nongenic,nongenic,nongenic,nongenic -14154 upstream,-5254 upstream,3512 into,3570 into {Y59A8B.21},{Y59A8B.23a,Y59A8B.23b},{Y59A8B.22.1},{Y59A8B.22.2} 4986 CB6890_redo V 17972080 1 G T 255 1.19 63 62 4 21 25 @t,,Tt,t,tttTttTTTtTtTttTt point 0 nongenic,nongenic,nongenic,nongenic -14144 upstream,-5264 upstream,3522 into,3580 into {Y59A8B.21},{Y59A8B.23a,Y59A8B.23b},{Y59A8B.22.1},{Y59A8B.22.2} 4987 CB6890_redo V 17975954 1 T A 90 2.00 63 62 0 4 4 @AAaA point 0 nongenic,nongenic,nongenic -10270 upstream,-9138 upstream,4096 into {Y59A8B.21},{Y59A8B.23a,Y59A8B.23b},{Y59A8B.22.1,Y59A8B.22.2} 6829 CB6890_redo V 17989160 1 X X -1000 -999.99 -1000 -1000 6 -3 3 @,G.,.,, indel -1 SNP none {uCE5-2743} 4993 CB6890_redo V 18022415 1 G A 255 1.00 63 62 0 19 19 @aaAaAaaAaaaaAAAaAAa point 0 nongenic,nongenic,nongenic -27 upstream,-29 upstream,-5122 upstream {Y59A8B.6.1},{Y59A8B.6.2},{Y59A8B.4} 4997 CB6890_redo V 18063056 1 C G 14 2.25 0 0 0 4 4 @Gggg point 0 nongenic 1056 into {Y59A8B.8} 163077 CB6890_redo V 18139708 190 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 747 to 937 bp into {Y37H2A.10} 5005 CB6890_redo V 18211054 1 G A 3 5.31 63 12 1 5 6 @ATAA,A point 0 nongenic -2002 upstream {F16H6.7} 5006 CB6890_redo V 18211056 1 C T 15 5.31 63 2 0 6 6 @TTTTTT point 0 nongenic -2004 upstream {F16H6.7} 5007 CB6890_redo V 18211057 1 C T 12 6.00 63 2 0 4 4 @TTTT point 0 nongenic -2005 upstream {F16H6.7} 5010 CB6890_redo V 18380230 1 T G 255 1.00 63 62 0 31 31 @GgggGGgGggggggGgggGGggGGGGGGgGg point 0 SNP none {haw92765,pas8875} 6831 CB6890_redo V 18389635 5 X X -1000 -999.99 -1000 -1000 5 -4 1 @,,,.cc, indel -5 nongenic,nongenic -522 upstream,394 into {Y51A2B.4},{Y51A2B.5} 5015 CB6890_redo V 18413641 1 G C 7 1.00 63 62 4 5 9 @C.C.ccc.. point 0 nongenic,nongenic -675 upstream,-687 upstream {ZK262.3},{ZK262.2} 5025 CB6890_redo V 18501663 1 A T 255 1.00 63 62 0 46 46 @TtttTttTTTTTtTTTtttTTTtTtttttTTTTTTTttTTTtttTT point 0 nongenic,nongenic,nongenic,nongenic -14440 upstream,-7175 upstream,6238 into,6441 into {Y51A2D.18},{Y51A2D.1},{Y51A2D.19a,Y51A2D.19b},{Y51A2D.19c} 5027 CB6890_redo V 18530621 1 G C 162 5.25 63 62 1 12 13 @CCCCC.cCCcCCC point 0 nongenic -3298 upstream {Y51A2D.7a,Y51A2D.7b} 5028 CB6890_redo V 18537035 1 C T 107 1.00 63 38 0 5 5 @ttTTT point 0 nongenic 3116 into {Y51A2D.7a,Y51A2D.7b} 5029 CB6890_redo V 18537037 1 G C 49 1.00 63 0 0 4 4 @cCCC point 0 nongenic 3118 into {Y51A2D.7a,Y51A2D.7b} 5041 CB6890_redo V 18656480 1 T C 255 1.00 63 62 0 15 15 @cccCccCccccCcCc point 0 nongenic,nongenic,nongenic 324 into,348 downstream,408 into {Y69H2.3c},{Y69H2.12},{Y69H2.3b} 5048 CB6890_redo V 18681507 1 G T 21 4.50 0 20 0 8 8 @TTtTtTTT point 0 nongenic 2820 into {Y69H2.10b} 5050 CB6890_redo V 18683437 1 G T 85 6.19 63 62 0 15 15 @TTTtTTtTTTTtTTt point 0 nongenic 890 into {Y69H2.10b} 5055 CB6890_redo V 18783371 1 A C 12 10.00 63 0 0 4 4 @CCCC point 0 nongenic -3188 upstream {Y17D7B.4.1} 5060 CB6890_redo V 18858714 1 C T 255 1.00 63 62 0 23 23 @tttttttttttttttttttTttt point 0 SNP none {haw93705} 5064 CB6890_redo V 18918372 1 A G 13 1.00 63 62 1 4 5 @GGGG, point 0 nongenic,nongenic 573 downstream,911 downstream {Y80D3A.5},{Y80D3A.7} 5065 CB6890_redo V 18941842 1 A C 255 2.00 63 62 4 38 42 @ccc,,c,c,CccCcccCCCCCCcccCCccCcCcCcCcCcCcC point 0 missense GAA->GCA[Glu->Ala] {Y80D3A.8} 5067 CB6890_redo V 18959114 1 A G 239 6.50 63 62 0 23 23 @GgggggggGgggggggGgggggg point 0 nongenic,nongenic -1842 upstream,910 into {Y80D3A.9},{Y39B6A.46} 5068 CB6890_redo V 18959149 1 A G 255 8.25 50 62 0 31 31 @gGggggggGgGgggggggGGGggGGggGggG point 0 nongenic,nongenic -1877 upstream,945 into {Y80D3A.9},{Y39B6A.46} 5072 CB6890_redo V 18962810 1 C T 203 1.06 63 62 0 14 14 @tTtttttTttTTtt point 0 nongenic,nongenic -2672 upstream,1745 into {Y39B6A.46},{Y39B6A.43a,Y39B6A.43b} 5075 CB6890_redo V 18965154 1 T A 255 1.00 63 62 0 11 11 @aaAAaaaaaaa point 0 SNP none {haw94014} 5080 CB6890_redo V 19052087 1 T C 255 1.00 63 62 0 26 26 @CCCCccCccccCCccCCCCCCcCCCC point 0 SNP none {haw94226} 5093 CB6890_redo V 19105918 1 T G 255 1.00 63 62 0 29 29 @GgGggggGgGggGGGggGGGGGGGGGgGG point 0 nongenic,nongenic -4844 upstream,3508 into {Y39B6A.16},{Y39B6A.14} 5094 CB6890_redo V 19106036 1 T C 255 1.00 63 62 0 49 49 @CCCCCCccCCcCCCcCCcCCCCCCCCCccCcCCCccCcCCCCcCCcCCc point 0 nongenic,nongenic -4962 upstream,3626 into {Y39B6A.16},{Y39B6A.14} 5096 CB6890_redo V 19187353 1 T C 253 1.00 63 62 0 13 13 @CCCCCCCcCcccc point 0 nongenic 512 into {Y39B6A.48} 5098 CB6890_redo V 19250263 1 T A 255 1.81 63 62 0 29 29 @aaaaAAaaAaAAAAAaAAAaAaaAaAAAA point 0 nongenic,nongenic -3616 upstream,739 into {F21D9.4},{T26H2.6} 5105 CB6890_redo V 19499424 1 G C 255 1.00 63 62 0 13 13 @CCCcCccccccCc point 0 nongenic,nongenic -3651 upstream,-3772 upstream {Y43F8B.3a,Y43F8B.3b},{Y43F8B.5} 5107 CB6890_redo V 19658434 1 A G 48 1.00 63 4 1 6 7 @.gggggg point 0 nongenic,nongenic -11789 upstream,-3218 upstream {Y43F8C.11},{Y43F8C.10} 5115 CB6890_redo V 19810807 1 C G 3 1.00 63 0 3 4 7 @,,gggg. point 0 nongenic,nongenic -4600 upstream,-9710 upstream {Y116F11B.1},{Y116F11B.2} 5116 CB6890_redo V 19810812 1 C G 40 1.00 63 0 0 6 6 @gggggg point 0 nongenic,nongenic -4595 upstream,-9715 upstream {Y116F11B.1},{Y116F11B.2} 5117 CB6890_redo V 19816962 1 C T 255 1.00 63 62 0 25 25 @ttttTtTttttTTTttTTtTttttT point 0 SNP none {haw96009} 5118 CB6890_redo V 19862667 1 A C 255 1.00 63 62 0 21 21 @CCCcCCccccCCcccccCcCc point 0 ncRNA,SNP none,none {Y116F11B.9b},{haw96106} 5119 CB6890_redo V 19868214 1 C G 255 1.06 63 62 0 28 28 @GGgGggGgggGggGGGGgggGggggGgG point 0 nongenic,nongenic -267 upstream,-9969 upstream {Y116F11B.9a},{Y116F11B.11} 5131 CB6890_redo V 20122792 1 A G 48 1.00 63 62 0 5 5 @GGGgg point 0 nongenic -2155 upstream {Y113G7A.4a} 6837 CB6890_redo V 20328259 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @.,,Ag indel 1 nongenic 239 downstream {Y38H6A.1} 5133 CB6890_redo V 20328260 1 G A 47 1.00 63 38 0 5 5 @aAAAc point 0 nongenic 240 downstream {Y38H6A.1} 5134 CB6890_redo V 20328261 1 A T 38 1.00 63 42 1 3 4 @TTT. point 0 nongenic 241 downstream {Y38H6A.1} 5136 CB6890_redo V 20337877 1 C T 255 1.00 63 62 0 34 34 @TtttttTttTtTTTTTtTttTttTTTTttttTtt point 0 SNP none {haw97199} 5139 CB6890_redo V 20550701 1 C T 255 1.00 63 62 0 45 45 @tttTTttTTTtttTttttTtttTTtTtTTtTTttttttTtttttt point 0 nongenic,nongenic -3589 upstream,427 into {Y38H6C.18},{Y38H6C.20} 5140 CB6890_redo V 20603448 1 G A 255 1.00 63 62 0 20 20 @AaaaAAaaAAAAAaaAaaaa point 0 missense CGT->CAT[Arg->His] {F46B3.3} 5162 CB6890_redo X 5530 1 G C 6 3.25 56 50 2 2 4 @,,Cc point 0 nongenic 1625 into {CE7X_3.1} 5163 CB6890_redo X 5531 1 C G 51 2.19 44 6 1 4 5 @,Gggg point 0 nongenic 1624 into {CE7X_3.1} 5164 CB6890_redo X 5694 1 G T 29 1.00 63 0 0 4 4 @TTTt point 0 premature_stop GAG->TAG[Glu->stop] {CE7X_3.1} 5167 CB6890_redo X 5703 1 A T 92 1.69 63 10 0 4 4 @TTTt point 0 missense ATT->TTT[Ile->Phe] {CE7X_3.1} 5173 CB6890_redo X 30049 1 C G 12 2.00 63 0 0 4 4 @GGGG point 0 nongenic -5095 upstream {VY35H6BL.1} 5174 CB6890_redo X 30050 1 C G 12 2.00 63 0 0 4 4 @GGGG point 0 nongenic -5096 upstream {VY35H6BL.1} 5191 CB6890_redo X 106540 1 T A 3 2.06 0 22 15 17 32 @,a..aA.,.A,.A.aAaAA.aA.,,AAA.AA. point 0 nongenic,nongenic -1777 upstream,430 downstream {Y73B3A.4},{Y73B3A.5} 5192 CB6890_redo X 106701 1 A G 234 3.06 63 62 3 22 25 @g.G..gggGgTGggGGgGgGggGGg point 0 nongenic,nongenic -1938 upstream,269 downstream {Y73B3A.4},{Y73B3A.5} 5193 CB6890_redo X 161175 1 G T 255 7.25 63 62 0 19 19 @TTTtTttTTTttTTTtTTt point 0 nongenic -3814 upstream {Y73B3A.10} 5194 CB6890_redo X 161249 1 G C 12 1.00 63 0 0 4 4 @CCCC point 0 nongenic -3888 upstream {Y73B3A.10} 5199 CB6890_redo X 187274 1 C G 255 1.06 63 62 0 39 39 @GGggggGGgGgggGggGGGgggGggggggggGGGGgGgg point 0 SNP none {haw98538} 5202 CB6890_redo X 289841 1 G C 255 2.62 63 62 1 28 29 @CcCCCcCccccCCCCcCcCcCCCcCcCC, point 0 nongenic,nongenic -3316 upstream,-7406 upstream {Y47C4A.1},{R57.2} 5203 CB6890_redo X 289852 1 G C 255 7.81 63 62 6 19 25 @CCCc,cCcCCCc,c,,,,CcCCCCc point 0 nongenic,nongenic -3327 upstream,-7395 upstream {Y47C4A.1},{R57.2} 5204 CB6890_redo X 291566 1 T C 9 7.12 20 32 1 27 28 @,CCcCccccCccCcCcCcccCCccCcCc point 0 nongenic,nongenic -5041 upstream,-5681 upstream {Y47C4A.1},{R57.2} 6841 CB6890_redo X 292541 0 X X -1000 -999.99 -1000 -1000 152 -138 14 @,,,,,,,,,........,,,,,,,,,,,,,,,,,,,,,,,.............,,,,,,,,,,,,...............,,,,,,,,,,,,,,,,,,, indel 1 nongenic,nongenic -4707 upstream,-6016 upstream {R57.2},{Y47C4A.1} 5208 CB6890_redo X 299633 1 T A 255 1.00 63 62 0 23 23 @aAAaaAaaaaAAAAAAAAAaAaA point 0 SNP none {haw98564} 5209 CB6890_redo X 320955 1 T G 138 2.81 63 62 2 6 8 @gGgGGG.. point 0 nongenic,nongenic -1567 upstream,-9631 upstream {M02E1.3},{M02E1.2} 5210 CB6890_redo X 320956 1 C T 125 3.00 63 62 3 6 9 @tTtTTT... point 0 nongenic,nongenic -1566 upstream,-9632 upstream {M02E1.3},{M02E1.2} 5216 CB6890_redo X 331769 1 C G 12 1.00 63 2 0 4 4 @gggg point 0 nongenic,nongenic 1943 into,2819 into {M02E1.1b.1},{M02E1.1a,M02E1.1b.2} 5218 CB6890_redo X 341454 1 G C 255 1.00 63 62 0 17 17 @CcCccCcCCccCccccc point 0 nongenic -221 upstream {C04E7.4} 5219 CB6890_redo X 346995 1 G T 152 1.00 63 62 0 5 5 @ttTtt point 0 nongenic,nongenic -6624 upstream,-705 upstream {C04E7.2},{C04E7.3} 5220 CB6890_redo X 347000 1 G T 109 1.00 63 62 0 4 4 @tTtt point 0 nongenic,nongenic -6619 upstream,-710 upstream {C04E7.2},{C04E7.3} 5221 CB6890_redo X 347035 1 G T 50 1.00 63 30 1 3 4 @TT.t point 0 nongenic,nongenic -6584 upstream,-745 upstream {C04E7.2},{C04E7.3} 5222 CB6890_redo X 347042 1 G T 109 1.00 63 62 1 6 7 @TT.tTTT point 0 nongenic,nongenic -6577 upstream,-752 upstream {C04E7.2},{C04E7.3} 5228 CB6890_redo X 348115 1 C A 255 1.00 63 62 0 33 33 @AaaaAAaaAAAaaaaaAAaaAAaAAAaaaaAaa point 0 SNP none {haw98580} 5237 CB6890_redo X 382890 1 C G 255 1.00 63 62 0 35 35 @GgGGGgGgggGgGgGGGgggGgggggggggggGGG point 0 nongenic -179 upstream {R04A9.4} 5238 CB6890_redo X 424545 1 T C 255 2.31 63 62 0 35 35 @ccccccCcCccCcCccCcCCCCCCCccCCccccCC point 0 nongenic 1240 into {ZK1193.4} 5239 CB6890_redo X 424576 1 T C 255 2.19 63 62 0 44 44 @CCCCCCccCCccccCCCCCCCCcccCcCccCccCcccccccccc point 0 SNP none {haw98625} 5240 CB6890_redo X 424587 1 T C 255 1.75 63 62 0 35 35 @cccCCCCCCCCcccCcCccCccCccccccccccCc point 0 SNP none {haw98626} 5241 CB6890_redo X 424629 1 T C 255 1.06 63 62 0 23 23 @CcCCccccccccCCCCCCCCCCC point 0 nongenic 1324 into {ZK1193.4} 5242 CB6890_redo X 424765 1 G T 255 2.31 63 62 0 40 40 @tTTTttttTTTTtttTTTttTTTTTtTTTTTTtTTtTTtt point 0 SNP none {haw98627} 5244 CB6890_redo X 425334 1 G T 38 1.00 63 4 0 5 5 @tTTtT point 0 nongenic 1070 into {ZK1193.4} 5245 CB6890_redo X 425335 1 T G 30 1.00 63 4 0 4 4 @GGgG point 0 nongenic 1069 into {ZK1193.4} 5248 CB6890_redo X 425406 1 C T 31 1.00 63 0 0 4 4 @tttt point 0 nongenic 998 into {ZK1193.4} 163078 CB6890_redo X 425409 53 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 942 to 995 bp into {ZK1193.4} 5252 CB6890_redo X 425547 1 C G 255 1.00 63 62 0 40 40 @GgGggGGgGgggggGGGGGGGGGgGGgGggGggggggGgg point 0 nongenic 857 into {ZK1193.4} 5254 CB6890_redo X 443404 1 C G 184 2.88 33 62 0 9 9 @ggGgggGgg point 0 nongenic -9602 upstream {ZK1193.5a,ZK1193.5b} 5256 CB6890_redo X 444419 1 C G 3 1.00 63 2 1 4 5 @.gggg point 0 nongenic -10617 upstream {ZK1193.5a,ZK1193.5b} 5257 CB6890_redo X 444422 1 A G 3 1.00 63 0 1 4 5 @.gggg point 0 nongenic -10620 upstream {ZK1193.5a,ZK1193.5b} 5260 CB6890_redo X 486102 1 A G 255 1.00 63 62 0 38 38 @ggGgGggGggGGgGgGGgGggGgGGGGggGgggGgGGg point 0 SNP none {haw98666} 5262 CB6890_redo X 488806 1 G T 255 1.00 63 62 0 27 27 @tttttttTtTTttTTTTTTtTTTtTtT point 0 SNP none {haw98668} 5263 CB6890_redo X 491868 1 C A 255 1.00 63 62 0 41 41 @aAAAAaAAaaAAAaaaaaaAaAaaaaaAaaAAaaAAAAAaa point 0 SNP none {haw98673} 5270 CB6890_redo X 515520 1 G C 3 1.00 63 0 2 4 6 @CCC..c point 0 nongenic -1035 upstream {B0310.3} 5275 CB6890_redo X 515530 1 C G 3 1.00 63 0 3 6 9 @,gg.gggg. point 0 nongenic -1045 upstream {B0310.3} 5278 CB6890_redo X 538129 1 G T 207 2.00 63 62 0 11 11 @ttttttttttt point 0 nongenic,nongenic,nongenic -2292 upstream,-4979 upstream,943 into {F28C10.3},{F28C10.1},{F28C10.4} 5280 CB6890_redo X 538182 1 A G 184 1.12 63 62 0 9 9 @ggggggggg point 0 nongenic,nongenic,nongenic -2345 upstream,-4926 upstream,996 into {F28C10.3},{F28C10.1},{F28C10.4} 5285 CB6890_redo X 582138 1 C G 3 1.25 63 0 2 2 4 @,,GG point 0 nongenic,nongenic,nongenic -11822 upstream,-1998 upstream,5347 into {F13C5.2},{F57C12.5d.2},{F57C12.5a,F57C12.5b,F57C12.5c,F57C12.5d.3,F57C12.5e} 5286 CB6890_redo X 608676 1 A C 32 1.00 63 26 6 6 12 @,,,C,,,Ccccc point 0 nongenic -182 upstream {F13C5.5} 5287 CB6890_redo X 614946 1 T G 30 5.25 63 20 1 8 9 @G,GGGGGGg point 0 nongenic,nongenic,nongenic,nongenic -14242 upstream,-6452 upstream,3680 into,3814 into {M6.4},{F13C5.5},{F13C5.6a},{F13C5.6b} 5288 CB6890_redo X 817619 1 A T 255 1.00 63 62 0 36 36 @ttttTTtTTtTTTtTtTtTttTtTtTTTtTTTttTt point 0 SNP none {haw98919} 5289 CB6890_redo X 1017350 1 T A 255 1.00 63 62 0 21 21 @AaAAaAAaAaaaaAaaAaAaa point 0 missense AAC->ATC[Asn->Ile] {F55A4.2} 5290 CB6890_redo X 1047732 1 C T 255 1.00 63 62 0 38 38 @GttTTtTTTTTTTtTTTTttTTTtttTTtTttTTttTt point 0 nongenic,nongenic -1527 upstream,-6479 upstream {F55A4.8a},{K03E6.3} 5291 CB6890_redo X 1050568 1 C G 20 1.12 63 24 6 8 14 @G,,AGGGG,.g,.t point 0 nongenic,nongenic -3643 upstream,-4363 upstream {K03E6.3},{F55A4.8a} 5292 CB6890_redo X 1054224 1 C T 255 1.00 63 62 0 24 24 @tttTttTTTtttTTTttTttTttT point 0 premature_stop CAA->TAA[Gln->stop] {K03E6.3} 5293 CB6890_redo X 1061402 1 C T 255 1.00 63 62 0 33 33 @tttTtTttTTTTtttTTtttTTTTTTtTttTTT point 0 nongenic,nongenic 1040 into,1044 into {K03E6.5b},{K03E6.5a} 5294 CB6890_redo X 1073732 1 G T 255 1.00 63 62 0 26 26 @TTTTtTtTTTTtttTTttttttttTt point 0 SNP none {haw99047} 5296 CB6890_redo X 1133524 1 T A 255 1.00 63 62 0 30 30 @AaaaaaAaAAaAaaaAAaAAAAAAAaaaaA point 0 SNP none {haw99081} 5297 CB6890_redo X 1133556 1 T A 255 1.00 63 62 0 26 26 @AAAAaaaaAAAAaaAaAAAAAAaAaa point 0 SNP none {haw99082} 5302 CB6890_redo X 1226077 1 G C 255 1.00 63 62 0 14 14 @cccCccCccccccC point 0 SNP none {haw99127} 5303 CB6890_redo X 1328826 1 T C 127 1.00 63 56 0 5 5 @ccccc point 0 nongenic,nongenic 38 downstream,844 downstream {F21E9.2},{H42K12.1a,H42K12.1b} 5305 CB6890_redo X 1333863 1 A C 143 1.00 63 62 0 6 6 @CCcCCC point 0 SNP none {haw99214} 5306 CB6890_redo X 1374604 1 G C 3 1.00 63 0 1 5 6 @C,CCTC point 0 three_prime_UTR none {F56C3.2} 5307 CB6890_redo X 1374606 1 G C 3 7.62 63 0 2 4 6 @CC,C,c point 0 three_prime_UTR none {F56C3.2} 5311 CB6890_redo X 1472305 1 G T 255 1.00 63 62 0 30 30 @TtTTtTttTtttttTtTtTtttTTTtTTtT point 0 SNP none {haw99409} 5315 CB6890_redo X 1519786 1 C A 231 1.00 63 62 0 17 17 @AAAAAAAAAAAAAAAAA point 0 nongenic 1698 into {F09E10.8a,F09E10.8b} 5316 CB6890_redo X 1519787 1 C A 232 1.00 63 62 0 17 17 @AAAAAAAAAAAAAAAAA point 0 nongenic 1697 into {F09E10.8a,F09E10.8b} 5319 CB6890_redo X 1595787 1 A G 115 1.00 63 18 0 10 10 @GGGGgggggg point 0 nongenic -9114 upstream {H11E01.3} 5321 CB6890_redo X 1602370 1 C G 31 1.00 63 62 3 8 11 @,,gggggg,gg point 0 nongenic -2531 upstream {H11E01.3} 5322 CB6890_redo X 1604340 1 G T 197 1.00 63 62 0 10 10 @tttttttttt point 0 nongenic -561 upstream {H11E01.3} 5340 CB6890_redo X 1717742 1 C A 255 1.00 63 62 0 23 23 @aaaaAaaAAAaAAaAAaAaAaaA point 0 SNP none {haw99773} 6854 CB6890_redo X 1753685 0 X X -1000 -999.99 -1000 -1000 8 -7 1 @...,T,,,,t indel 1 nongenic,nongenic -2728 upstream,-5112 upstream {Y75D11A.1},{Y75D11A.6} 5351 CB6890_redo X 1884561 1 T A 3 8.06 0 2 8 12 20 @.aAaaaaAaAAAA.,.,,.. point 0 nongenic -7620 upstream {B0294.3} 5353 CB6890_redo X 1885828 1 C T 12 7.06 37 16 13 88 101 @tttttttttttTttTtttttttttttttTtTttttTtttt.tTTTTttTttTtttTTtttttttttT,t.ttTtttttttttt,,,t.tt.ttt,,,,t point 0 nongenic -6353 upstream {B0294.3} 5356 CB6890_redo X 1885991 1 C T 6 7.12 0 0 44 46 90 @,t,t,.,tttttttt,,,t.tt,,,t,t,Tttt,,ttT,tT,T,,,,,,,Ttt,,tTTtT,,t..t,,,t,,t,,,,,Tt.t,T.TTTtt point 0 nongenic -6190 upstream {B0294.3} 6855 CB6890_redo X 2002626 0 X X -1000 -999.99 -1000 -1000 3 1 4 @,.,AaaAaa indel 0 nongenic,nongenic -11511 upstream,141 downstream {Y102A11A.9.1},{Y40A1A.1} 5369 CB6890_redo X 2008252 1 T A 255 8.31 63 62 1 36 37 @aAAAaAAaaAaaaAaaaaaAaaaaAaaaaaaa,aaAa point 0 nongenic -5884 upstream {Y102A11A.9.1} 5370 CB6890_redo X 2008591 1 A T 42 1.38 50 36 1 4 5 @.ttTT point 0 nongenic -5545 upstream {Y102A11A.9.1} 5371 CB6890_redo X 2008655 1 A T 12 1.00 0 4 0 4 4 @tttt point 0 nongenic -5481 upstream {Y102A11A.9.1} 5377 CB6890_redo X 2044830 1 C T 255 1.00 63 62 0 34 34 @TttTttTttTTtttttttttTtTTttTTTTTTTT point 0 nongenic,nongenic,nongenic -6757 upstream,-7071 upstream,1512 into {Y102A11A.7},{Y102A11A.1},{Y102A11A.8} 5378 CB6890_redo X 2045654 1 C T 255 1.00 63 62 0 43 43 @TtttTtttttTTtTTttTTttttTTTTttTtTTTttTtttTtt point 0 nongenic,nongenic,nongenic -6247 upstream,-7581 upstream,688 into {Y102A11A.1},{Y102A11A.7},{Y102A11A.8} 5383 CB6890_redo X 2127376 1 C T 255 1.00 63 62 0 25 25 @TTtttTTTTTTTTTTTTtTTTTTtT point 0 silent CTG->CTA[Leu->Leu] {F53B1.8} 5384 CB6890_redo X 2165879 1 A G 48 1.00 63 62 1 3 4 @gGg. point 0 silent GTA->GTG[Val->Val] {F48B9.3} 5385 CB6890_redo X 2208507 1 C T 255 1.00 63 62 1 29 30 @tTtTttTTTTtttT,ttttTTtttTTTtTt point 0 nongenic,nongenic -3449 upstream,-7116 upstream {T24C12.4},{T14F9.4a} 5386 CB6890_redo X 2225586 1 C T 255 1.00 63 62 0 34 34 @TTttTtTTTttTTtTtTtTTtttTTTTTttTTtT point 0 silent AAC->AAT[Asn->Asn] {T14F9.3} 5387 CB6890_redo X 2370396 1 G T 9 1.00 63 10 2 2 4 @,,Tt point 0 nongenic,nongenic -4459 upstream,-5595 upstream {T24D8.6},{F47G3.3} 5388 CB6890_redo X 2370397 1 A G 11 1.00 63 8 0 4 4 @CCGg point 0 nongenic,nongenic -4460 upstream,-5594 upstream {T24D8.6},{F47G3.3} 5389 CB6890_redo X 2428302 1 T C 36 1.00 63 50 0 4 4 @cCCc point 0 nongenic,nongenic -802 upstream,-851 upstream {T07D1.1a,T07D1.1b},{T07D1.1c} 5390 CB6890_redo X 2428303 1 C T 51 1.00 63 36 0 8 8 @TTtTTTTT point 0 nongenic,nongenic -803 upstream,-852 upstream {T07D1.1a,T07D1.1b},{T07D1.1c} 5391 CB6890_redo X 2435478 1 G C 3 1.00 63 62 3 3 6 @,,,Ccc point 0 nongenic,nongenic,nongenic,nongenic -7978 upstream,3520 into,3675 into,3677 into {T07D1.1a,T07D1.1b},{T07D1.2.2},{T07D1.2.3},{T07D1.2.1} 5397 CB6890_redo X 2512840 1 C T 48 1.12 63 30 3 5 8 @...TTTTT point 0 nongenic,nongenic -4296 upstream,2472 into {K02E10.7},{K02E10.8a,K02E10.8b} 5398 CB6890_redo X 2522234 1 C A 26 1.00 63 62 6 10 16 @AaaaAaaaAa,,,,.. point 0 nongenic -6922 upstream {K02E10.8a,K02E10.8b} 5400 CB6890_redo X 2528115 1 T A 255 1.44 63 62 0 24 24 @aaaaaaAaaaAAAaAaaAAAaAaa point 0 nongenic,nongenic -12803 upstream,2908 into {K02E10.8a,K02E10.8b},{R11B5.1} 5401 CB6890_redo X 2537528 1 C A 24 1.00 63 62 3 8 11 @,,.aaaaAAAa point 0 nongenic -5096 upstream {R11B5.1} 5403 CB6890_redo X 2826263 1 A T 129 1.00 63 62 1 5 6 @.tTTtt point 0 nongenic,nongenic -12143 upstream,559 into {C14A11.6},{C14A11.7} 6864 CB6890_redo X 2893761 0 X X -1000 -999.99 -1000 -1000 5 -1 4 @..,.,AAaAa indel 0 nongenic,nongenic,nongenic -1213 downstream,-2275 upstream,-805 upstream {F52B10.3},{B0410.3},{B0410.1} 5404 CB6890_redo X 2894432 1 A T 255 2.81 63 62 0 39 39 @tTttTTtttttttTtTTttTTTTtttTTTtttTTTTTtT point 0 SNP none {snp_B0410[1]} 163080 CB6890_redo X 2990142 51 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 5872 to 5923 bp into {Y41G9A.1} 5424 CB6890_redo X 3027787 1 C G 163 1.00 63 62 0 9 9 @ggggggggg point 0 SNP none {haw101125} 5425 CB6890_redo X 3072981 1 G C 61 1.00 63 0 0 4 4 @CCCC point 0 nongenic,nongenic -2592 upstream,-8143 upstream {C33D12.1},{F52E4.4} 5427 CB6890_redo X 3072986 1 T C 12 1.00 63 0 0 4 4 @CCCC point 0 nongenic,nongenic -2597 upstream,-8138 upstream {C33D12.1},{F52E4.4} 5428 CB6890_redo X 3072989 1 G C 3 2.81 63 0 1 4 5 @CCCC. point 0 nongenic,nongenic -2600 upstream,-8135 upstream {C33D12.1},{F52E4.4} 5430 CB6890_redo X 3102869 1 A C 89 1.00 63 50 0 5 5 @ccccC point 0 nongenic,nongenic -644 upstream,372 downstream {F52E4.8},{K10B3.5} 5442 CB6890_redo X 3158187 1 C T 189 1.00 63 52 1 7 8 @TTTttTt. point 0 nongenic,nongenic -1742 upstream,-5733 upstream {C15C7.2.1},{C15C7.5} 5443 CB6890_redo X 3158207 1 C A 255 1.00 63 62 0 22 22 @aaaAaaaaaaaAAAAAaAAAaA point 0 nongenic,nongenic -1722 upstream,-5753 upstream {C15C7.2.1},{C15C7.5} 5444 CB6890_redo X 3205381 1 C T 255 1.00 63 62 0 46 46 @TtttTTTTtTTtTTTtTtTTTTTGtTTtTTttTTTTttTTTTTTtT point 0 nongenic,nongenic -6067 upstream,312 into {F56E3.4},{F28B4.1} 5448 CB6890_redo X 3207501 1 C T 133 1.38 63 38 0 5 5 @TTTtT point 0 nongenic 692 into {F28B4.4} 5449 CB6890_redo X 3214373 1 T C 16 1.00 63 62 5 6 11 @,,.,.cCCcCC point 0 nongenic,nongenic,nongenic -4736 upstream,3406 into,3909 into {F28B4.4},{F28B4.2b},{F28B4.2a} 5450 CB6890_redo X 3214375 1 C T 64 1.00 63 16 4 7 11 @,.,.tTTtTTt point 0 nongenic,nongenic,nongenic -4738 upstream,3408 into,3911 into {F28B4.4},{F28B4.2b},{F28B4.2a} 5455 CB6890_redo X 3237694 1 A G 255 1.00 63 62 0 40 40 @gGgGgggGGGGGgGgggGGggggGGgGGgggGGggGgGgg point 0 missense,SNP TTT->TCT[Phe->Ser],none {F40F4.6},{haw101350} 5456 CB6890_redo X 3240490 1 C T 255 1.00 63 62 0 29 29 @TtttTTtTtttttTtttttttTTtTtttt point 0 missense GCT->ACT[Ala->Thr] {F40F4.6} 5457 CB6890_redo X 3293918 1 C T 33 1.56 63 50 3 4 7 @.,,ttTT point 0 nongenic -3727 upstream {K09C4.2} 5458 CB6890_redo X 3367002 1 C G 255 1.00 63 62 0 27 27 @ggGggGgGgggggGGgGGgGGgGgGGg point 0 nongenic,nongenic -1945 upstream,-4519 upstream {ZK563.2},{ZK816.5} 5459 CB6890_redo X 3367003 1 G C 255 1.00 63 62 0 28 28 @ccCccCcCcccccCCcCCcCCcCcCCcC point 0 nongenic,nongenic -1944 upstream,-4520 upstream {ZK563.2},{ZK816.5} 6867 CB6890_redo X 3376415 0 X X -1000 -999.99 -1000 -1000 2 0 2 @., indel 0 nongenic,nongenic -1685 upstream,774 downstream {ZK563.4a,ZK563.4b},{ZK563.5} 5461 CB6890_redo X 3408399 1 T C 255 1.69 63 62 0 26 26 @CcCcCccCcccCCcccccCcCCcccc point 0 silent ATT->ATC[Ile->Ile] {C04F6.1.1,C04F6.1.2,C04F6.1.3} 5462 CB6890_redo X 3412023 1 T G 60 1.00 63 0 0 4 4 @GGGG point 0 ncRNA none {C04F6.6} 5463 CB6890_redo X 3413731 1 A T 8 1.00 63 62 6 7 13 @tTtTttt,.,.,. point 0 nongenic,nongenic,nongenic -11072 upstream,-2059 upstream,891 into {ZK813.6},{C04F6.4b.1},{C04F6.5} 5465 CB6890_redo X 3421817 1 C T 255 1.00 63 62 0 28 28 @tTttTTTTTttTTtTTttTttTTTtttt point 0 nongenic,nongenic -2829 upstream,-2986 upstream {C04F6.5},{ZK813.6} 5466 CB6890_redo X 3520397 1 C G 185 1.00 63 62 1 13 14 @GG,GgggggGGGGg point 0 nongenic,nongenic -14043 upstream,-8402 upstream {C12D12.5},{F56B6.5a,F56B6.5b} 5467 CB6890_redo X 3631566 1 G A 91 2.50 63 62 26 54 80 @,,A,,A.,a,..,.,,,,,,,,.A,AA,A.aA,AAAAaaAAAAAAaaAAAAAAAAAAAAAAAAAAAAAaAaaA,aa,Aaa point 0 nongenic,nongenic 693 downstream,976 downstream {C18B2.1},{R11G1.3} 5468 CB6890_redo X 3631670 1 T G 115 3.69 63 62 16 49 65 @,a,,gaggg.GgG,,G,G,gGGgG,Ggg,GGG,ggGGggGGgGGGGG,GgG,g,GGGGgg,g,gg point 0 SNP none {uCE6-825} 5469 CB6890_redo X 3631690 1 C G 127 3.19 63 62 40 99 139 @.,.,,,,,,,gG,gG,Ggg,G,,,gg,,.gG,g,GG,G,GgG,g,GGGGgg,g,ggGGGGGggggggggGGgggggGGG.ggGGgGGGgGGGGgGGggg point 0 SNP none {haw101541} 5470 CB6890_redo X 3631792 1 G T 202 1.12 63 62 16 62 78 @T.TTttT,tt,,T.ttTttTtttttTTTttttAtttttTtttTttttTTtttt,Tt,tt.TtT,tt.,,tt,,,,cTc point 0 SNP none {haw101542} 5471 CB6890_redo X 3653458 1 T C 255 1.00 63 62 0 27 27 @cccCcCccCccCCccccCccCCcCCcc point 0 SNP none {haw101553} 5472 CB6890_redo X 3677813 1 T A 255 1.00 63 62 0 44 44 @aaAaaaAAAAAaaAaAAaaAAAaaAaAaAAaaaAaaAaAAaAaa point 0 missense AAA->ATA[Lys->Ile] {C02F12.4} 5473 CB6890_redo X 3692241 1 C T 255 1.00 63 62 0 26 26 @TttTtttTttTtTtttTTtTtTttTT point 0 silent TCG->TCA[Ser->Ser] {C02F12.8} 5477 CB6890_redo X 3792109 1 T G 13 1.00 63 62 4 9 13 @,A.,,gggggggG point 0 nongenic 692 into {F35A5.4} 5480 CB6890_redo X 3802908 1 G C 93 1.00 63 44 0 6 6 @cCcCCc point 0 nongenic,nongenic,nongenic -155 upstream,-170 upstream,-2161 upstream {F35A5.8b},{F35A5.8a},{F35A5.2} 5481 CB6890_redo X 3811996 1 T G 160 1.06 63 62 1 10 11 @GGGGGGGGGG, point 0 nongenic 4398 into {F35A5.1} 5490 CB6890_redo X 3812067 1 A T 32 1.38 63 62 13 15 28 @....,T,.Tt.,TTttt,T.t,ttTT,t point 0 nongenic 4327 into {F35A5.1} 5491 CB6890_redo X 3812100 1 T A 67 1.06 63 62 15 17 32 @.a,aaAA,a,,a,Aa,,AaAA,a,A.,ag,., point 0 nongenic 4294 into {F35A5.1} 5492 CB6890_redo X 3812190 1 T C 14 1.00 63 26 1 3 4 @.ccC point 0 nongenic 4204 into {F35A5.1} 5503 CB6890_redo X 3902119 1 A C 107 1.00 63 62 0 5 5 @ccccc point 0 nongenic,nongenic -2451 upstream,-6460 upstream {T22B2.4a},{F47F2.3} 5505 CB6890_redo X 3903048 1 T C 214 1.00 63 62 0 12 12 @CccccccccCCC point 0 nongenic,nongenic -1522 upstream,-7389 upstream {T22B2.4a},{F47F2.3} 5506 CB6890_redo X 3924055 1 A G 255 1.00 63 62 0 26 26 @GGgGgGgGgGGggGGgGGGGgGgggg point 0 nongenic,nongenic -2005 upstream,841 downstream {T22B2.1},{T22B2.2} 5507 CB6890_redo X 3974054 1 T C 48 1.00 63 18 1 3 4 @Ccc, point 0 nongenic,nongenic -23305 upstream,-439 upstream {R02E12.5},{C16B8.4} 5508 CB6890_redo X 4017953 1 T C 52 1.00 63 62 2 4 6 @CCCc.. point 0 nongenic,nongenic,nongenic -1269 upstream,-1829 upstream,4235 into {R02E12.2b.1},{R02E12.6.1},{R02E12.2a} 5509 CB6890_redo X 4025107 1 A G 255 1.00 63 62 0 23 23 @GgGGGcgGGGGGGgggGGggGGG point 0 silent AAA->AAG[Lys->Lys] {R02E12.8} 5510 CB6890_redo X 4026006 1 A C 252 3.31 63 62 0 27 27 @cCcCCcCCCCcccccCCcCcccccccc point 0 nongenic 444 downstream {R02E12.8} 5538 CB6890_redo X 4074388 1 A C 7 1.00 63 32 2 13 15 @GGGCGcccccc.,ct point 0 nongenic -2918 upstream {T06F4.1a} 5539 CB6890_redo X 4074391 1 T C 33 1.00 63 6 3 11 14 @CCCCcccccc.,c. point 0 nongenic -2921 upstream {T06F4.1a} 5544 CB6890_redo X 4202727 1 T G 3 7.00 63 0 1 4 5 @G,Cgg point 0 nongenic -536 upstream {F20B6.6} 5547 CB6890_redo X 4202732 1 G C 15 1.19 63 0 0 5 5 @Ccccc point 0 nongenic -541 upstream {F20B6.6} 5551 CB6890_redo X 4241735 1 A C 246 1.56 63 62 0 15 15 @cccccccccCccccc point 0 SNP none {haw101997} 5553 CB6890_redo X 4241827 1 T C 78 3.50 40 62 0 4 4 @cccc point 0 nongenic -6004 upstream {W01H2.3a} 5554 CB6890_redo X 4241867 1 G T 129 3.44 39 62 6 12 18 @ttTtT,,,TTTTTT,,T, point 0 nongenic -6044 upstream {W01H2.3a} 5555 CB6890_redo X 4241902 1 T C 18 3.62 0 2 0 15 15 @CCCCCCCCCCCCCCc point 0 nongenic -6079 upstream {W01H2.3a} 5556 CB6890_redo X 4241950 1 A G 16 2.00 0 14 0 5 5 @GgGgG point 0 nongenic -6127 upstream {W01H2.3a} 5557 CB6890_redo X 4241966 1 A G 4 2.12 0 20 3 6 9 @,g,g,GGGG point 0 nongenic -6143 upstream {W01H2.3a} 5558 CB6890_redo X 4241982 1 G A 3 2.50 0 20 4 8 12 @,.,AAAAAAA.A point 0 nongenic -6159 upstream {W01H2.3a} 5559 CB6890_redo X 4242071 1 T C 203 3.00 63 62 0 16 16 @CCCCCCCCCCcCCCCC point 0 nongenic -6248 upstream {W01H2.3a} 5560 CB6890_redo X 4242094 1 G A 76 3.31 63 62 0 10 10 @AAAAAAAAAA point 0 nongenic -6271 upstream {W01H2.3a} 5561 CB6890_redo X 4242110 1 A C 166 2.31 63 62 0 18 18 @CCCCCCCCCCCCCCCCCC point 0 nongenic -6287 upstream {W01H2.3a} 5567 CB6890_redo X 4513922 1 C T 233 1.00 63 62 0 11 11 @tTTtttttttt point 0 SNP none {snp_F46H6[6]} 5568 CB6890_redo X 4548321 1 T A 28 1.00 63 62 4 7 11 @,,,aaAAa.aa point 0 nongenic -6343 upstream {C07A12.1b} 5579 CB6890_redo X 4577179 1 A T 255 1.00 63 62 0 44 44 @tTtttttTtttttttTTttTtTTTTTTTTTTTTTTTTttTTTTT point 0 SNP none {haw102400} 5580 CB6890_redo X 4578097 1 T C 255 1.00 63 62 0 27 27 @CcCcccCccccCcCCccCccCcCcccC point 0 nongenic -1381 upstream {C05E11.3} 6881 CB6890_redo X 4686586 0 X X -1000 -999.99 -1000 -1000 2 -1 1 @.,ggg indel 0 nongenic -8521 upstream {K02G10.4a} 5584 CB6890_redo X 4971580 1 C T 255 1.00 63 62 0 32 32 @tTTtTtTtTtttTttttTttTttTTTTTTTTt point 0 nongenic,nongenic,nongenic -699 upstream,-715 upstream,989 downstream {M03F4.7a},{M03F4.7b},{ZC8.6} 5585 CB6890_redo X 4971581 1 A C 255 1.00 63 62 0 33 33 @CCcCcCcCcccCccccCccCccCCCCCCCCcCC point 0 nongenic,nongenic,nongenic -700 upstream,-716 upstream,988 downstream {M03F4.7a},{M03F4.7b},{ZC8.6} 5586 CB6890_redo X 4974218 1 C T 255 1.00 63 62 1 26 27 @TTTTTt,TttTttttTttTtTttTTtt point 0 missense CGC->CAC[Arg->His] {ZC8.6} 5595 CB6890_redo X 5123322 1 T G 255 1.00 63 62 0 33 33 @GGGGggGgGGgGGggggGGGgGgGgGGggGggg point 0 nongenic,nongenic -15637 upstream,-6482 upstream {C31H2.1a,C31H2.1b},{C42D8.8b.1} 5597 CB6890_redo X 5134151 1 C G 255 1.00 63 62 0 26 26 @ggGGgggggGGGGGGgggGGggGGgG point 0 nongenic,nongenic -17311 upstream,-4808 upstream {C42D8.8b.1},{C31H2.1a,C31H2.1b} 5598 CB6890_redo X 5134152 1 G C 255 1.00 63 62 0 27 27 @CCcccccCCCCCCcccCCccCCcCCCc point 0 nongenic,nongenic -17312 upstream,-4807 upstream {C42D8.8b.1},{C31H2.1a,C31H2.1b} 5604 CB6890_redo X 5229266 1 C G 3 5.62 63 0 1 4 5 @.gggg point 0 nongenic -7256 upstream {H28G03.3} 5605 CB6890_redo X 5229269 1 A G 3 5.62 63 2 1 4 5 @.gggg point 0 nongenic -7259 upstream {H28G03.3} 5607 CB6890_redo X 5229274 1 C G 13 1.00 63 2 0 5 5 @ggggg point 0 nongenic -7264 upstream {H28G03.3} 5612 CB6890_redo X 5368989 1 C T 255 1.00 63 62 0 46 46 @tTTtTtTTttttTTttttttTTTttttTtttTTTttTTTTTtTTTt point 0 nongenic,nongenic 495 into,557 into {F35C8.3.2},{F35C8.3.1} 5613 CB6890_redo X 5403140 1 A G 3 3.25 63 2 2 2 4 @gG., point 0 nongenic,nongenic,nongenic -2588 upstream,1495 into,1689 into {C03F11.3},{C03F11.4.2,C03F11.4.3},{C03F11.4.1} 5614 CB6890_redo X 5403141 1 C A 3 3.25 63 2 2 2 4 @aA., point 0 nongenic,nongenic,nongenic -2589 upstream,1496 into,1690 into {C03F11.3},{C03F11.4.2,C03F11.4.3},{C03F11.4.1} 5615 CB6890_redo X 5403142 1 A C 3 3.25 63 2 2 2 4 @cC., point 0 nongenic,nongenic,nongenic -2590 upstream,1497 into,1691 into {C03F11.3},{C03F11.4.2,C03F11.4.3},{C03F11.4.1} 5621 CB6890_redo X 5599499 1 C G 4 1.00 63 40 2 6 8 @GGGGgG.. point 0 nongenic,nongenic -207 upstream,-5036 upstream {F14D12.5},{F14D12.1a,F14D12.1b} 6889 CB6890_redo X 5819247 1 X X -1000 -999.99 -1000 -1000 3 -2 1 @..G, indel -1 SNP none {uCE6-959} 5622 CB6890_redo X 5819248 1 G C 25 1.00 63 4 0 4 4 @ccCC point 0 SNP none {uCE6-959} 5627 CB6890_redo X 5822126 1 C T 255 1.00 63 62 0 31 31 @TttTTTTTTTTtTTTTTTTtTtTttTtTtTT point 0 nongenic,nongenic,nongenic -110 upstream,-16241 upstream,-901 upstream {F13D11.2a},{F13D11.3.1},{F13D11.2b} 5628 CB6890_redo X 5857436 1 T G 208 1.00 63 62 0 19 19 @GgGGgGgggggggGgggGa point 0 nongenic,nongenic -3221 upstream,-5280 upstream {W06B11.4},{F49E10.5} 5629 CB6890_redo X 5883992 1 C T 255 1.00 63 62 0 28 28 @ttTtTTTtTtttTttTTttTtttttTtt point 0 SNP none {haw103817} 6892 CB6890_redo X 6075482 0 X X -1000 -999.99 -1000 -1000 5 -3 2 @..,.,ggg indel 0 five_prime_UTR none {C45B2.4b.1} 5635 CB6890_redo X 6107174 1 T A 255 1.00 63 62 0 28 28 @AAaaaAAAaAAAaaaAAAAAaaAaAaaa point 0 nongenic 289 into {C15H9.7} 5636 CB6890_redo X 6227740 1 T G 98 1.00 63 50 1 5 6 @C,GgGg point 0 nongenic,nongenic -13868 upstream,1651 into {C14F11.2},{C14F11.3} 5645 CB6890_redo X 6287365 1 T A 15 6.00 0 2 0 6 6 @aaaaaa point 0 nongenic,nongenic,nongenic -1234 upstream,-5719 upstream,942 into {T07H6.4},{T07H6.2},{T07H6.5} 163085 CB6890_redo X 6287440 376 - - 0 0.00 0 0 0 0 0 uncovered 0 uncovered non-exonic, 3722 to 4098 bp into {T07H6.5} 5648 CB6890_redo X 6323867 1 A C 3 3.69 0 4 4 5 9 @.,,c,cccc point 0 missense GAC->GCC[Asp->Ala] {T10E10.2.1,T10E10.2.2,T10E10.2.3} 5649 CB6890_redo X 6323871 1 A C 3 3.69 0 4 4 6 10 @.,,c,ccccc point 0 silent GGA->GGC[Gly->Gly] {T10E10.2.1,T10E10.2.2,T10E10.2.3} 5650 CB6890_redo X 6326771 1 A C 3 3.88 0 6 3 4 7 @,,ccc.c point 0 silent GGA->GGC[Gly->Gly] {T10E10.1} 5651 CB6890_redo X 6331918 1 C T 255 1.00 63 62 0 22 22 @ttTttttTTtTtttttttttta point 0 silent TCC->TCT[Ser->Ser] {T10E10.6} 5652 CB6890_redo X 6412638 1 A T 255 1.00 63 62 0 25 25 @tTttTTtTtTttTtTTtttttTTtt point 0 SNP none {haw104221} 5653 CB6890_redo X 6575660 1 G T 255 1.00 63 62 0 33 33 @tTtttttTtTTttTTTTtTTtTTttTttttttt point 0 nongenic -6184 upstream {T14E8.3a,T14E8.3b} 5659 CB6890_redo X 6792031 1 G C 255 1.00 63 62 0 27 27 @CCCCCcCccCCCCCCccccCccCcCcc point 0 missense GAG->GAC[Glu->Asp] {H22K11.1} 5662 CB6890_redo X 6843321 1 A T 255 9.75 63 62 0 27 27 @ttttttttttTttTtTtTTttttttTt point 0 nongenic -1387 upstream {C53B7.3a,C53B7.3b,C53B7.3c,C53B7.3d.2} 5669 CB6890_redo X 6988065 1 C G 132 1.00 63 62 0 6 6 @GGgGGG point 0 nongenic -3642 upstream {F01E11.1} 5688 CB6890_redo X 7077720 1 T C 229 6.19 63 62 40 215 255 @CCCCCCCCCCCCCCCGcccccc,CCGCCCCCCCCCCCGCCCccccccccccccccCA,CCCCCCCCC,CCCccc.ccCCCCCGCCCCCCCCCCCCCCGC point 0 nongenic,nongenic -2432 upstream,-7596 upstream {B0403.6},{Y1B5A.1} 5691 CB6890_redo X 7078149 1 A T 4 6.50 27 26 126 129 255 @...,........,,...ttt.,t..........,,,,,TT......t........t...,,....,.,....,,,.t....,Tt..tt.,T......t, point 0 nongenic,nongenic -2861 upstream,-7167 upstream {B0403.6},{Y1B5A.1} 5692 CB6890_redo X 7078203 1 A G 26 8.56 5 38 43 212 255 @Ggg.gGGGgggggG.gGGg.,GGGGG,.gggGGGGCggGGGgg.gggg.GGgggggggGGg.gggg,gggg.,GGggggg.gggGGGGG,gggGGGgGG point 0 nongenic,nongenic -2915 upstream,-7113 upstream {B0403.6},{Y1B5A.1} 5693 CB6890_redo X 7078298 1 G A 3 6.69 7 16 83 156 239 @AAAaaaaAAA.caaaac.AAAAaaaaa.aa,AAaa.aaaA..aaaA...aA.aaaaa..a.aA.a.aAaaa,.a..aaT,A..a.,,.aac.a,a.aaa point 0 nongenic,nongenic -3010 upstream,-7018 upstream {B0403.6},{Y1B5A.1} 5695 CB6890_redo X 7078449 1 A T 7 6.44 63 26 131 124 255 @,,,,,,,,,T,TTt..,,T,,,,T.tt..,,,,,tt..T,,,,,.,T,t..t.,,,..,,,,,,...,,.,,,,,,,,,,,..,,,G,,,.,.T,T,,, point 0 nongenic,nongenic -3161 upstream,-6867 upstream {B0403.6},{Y1B5A.1} 5697 CB6890_redo X 7078503 1 A G 3 8.44 0 12 31 204 235 @G,,gGGgGGgGGGGggGGGGGGGggggGGGg.g..g,Gg.gGGgg.GGG,gg,Gggg.gGG,gggggg.gGGGGgggG,GggggggggGGGG,gggggg point 0 nongenic,nongenic -3215 upstream,-6813 upstream {B0403.6},{Y1B5A.1} 5698 CB6890_redo X 7078663 1 A G 3 8.81 0 10 42 159 201 @.,........g.GGgggg.G,G,gG,,gg,,gG,G,gg.GgGGgggg.gggggggGG,gGGGggg.GCG,GgggggggggGGGGGgggggggGGGG,gG point 0 nongenic,nongenic -3375 upstream,-6653 upstream {B0403.6},{Y1B5A.1} 5700 CB6890_redo X 7078698 1 T A 5 5.31 16 12 51 86 137 @,,,,A,,A.,AG..g,..a..AagA,a..,AGG.a.......,,...,GaaAA,,agagAAAGAAg,G.A,aa.AAaG,AA.gg.AAGGAa.gG,Ggga point 0 nongenic,nongenic -3410 upstream,-6618 upstream {B0403.6},{Y1B5A.1} 5703 CB6890_redo X 7078863 1 A G 3 9.06 0 14 41 210 251 @..G.,GG,GG.,GGG.,.G.gg...G.gGGCgGg,G,ggGGGGggggGGGgggggggg,GGGGGGggggggGGGGGGgggggggggggggggggggG,G point 0 nongenic,nongenic -3575 upstream,-6453 upstream {B0403.6},{Y1B5A.1} 5706 CB6890_redo X 7112263 1 G T 52 3.50 63 62 2 4 6 @tttt,, point 0 nongenic -576 upstream {C36B7.1} 5708 CB6890_redo X 7167665 1 C T 255 1.00 63 62 0 36 36 @tttTTtTtTTTtTTttTTTTTTTTTTttTTtttTtt point 0 missense GAT->AAT[Asp->Asn] {C54D1.6.1,C54D1.6.2} 5709 CB6890_redo X 7224737 1 A T 255 1.00 63 62 1 28 29 @Ttt,TTTTTTTTTttTTTttTTTTtTttT point 0 nongenic 2032 into {ZK867.1a,ZK867.1b,ZK867.1c,ZK867.1d} 5712 CB6890_redo X 7247377 1 C A 255 1.00 63 62 0 47 47 @AAaaaaaAAaaAaaaaAaaaAaaaAAaaAaaAaaAaaaAAAaaaAAa point 0 SNP none {haw104705} 5724 CB6890_redo X 7361569 1 A G 115 1.69 63 26 0 8 8 @GGgGGGGG point 0 nongenic -3945 upstream {C56G3.2} 5725 CB6890_redo X 7361576 1 A C 13 1.75 43 0 0 5 5 @CCCCC point 0 nongenic -3938 upstream {C56G3.2} 5727 CB6890_redo X 7361578 1 G C 15 2.00 21 0 0 5 5 @CCCCc point 0 nongenic -3936 upstream {C56G3.2} 5739 CB6890_redo X 7418979 1 C T 255 1.00 63 62 0 29 29 @ttTtTTTtttTTttttttTtTTttTTtTt point 0 nongenic,nongenic -1869 upstream,402 downstream {C10A4.9},{C10A4.1} 5740 CB6890_redo X 7419124 1 A G 255 1.00 63 62 0 37 37 @GGGggggGGGggggggGggGgGGgggGgGggggggGG point 0 nongenic,nongenic -1724 upstream,547 downstream {C10A4.9},{C10A4.1} 5741 CB6890_redo X 7507748 1 C A 3 1.25 63 0 1 3 4 @,Aaa point 0 nongenic,nongenic,nongenic -1166 upstream,209 downstream,83 downstream {F48E3.7},{F48E3.8b,F48E3.8c},{F48E3.8a} 5743 CB6890_redo X 7527774 1 C T 241 1.00 63 62 0 20 20 @tttttttttttttttttttt point 0 SNP none {haw104910} 5744 CB6890_redo X 7566551 1 T C 255 1.00 63 62 0 30 30 @CCCCCcCCCCCCcccccCcCCcCccCccCc point 0 missense,SNP GTT->GCT[Val->Ala],none {F08C6.3},{haw104923} 5745 CB6890_redo X 7588883 1 T C 255 1.00 63 62 0 37 37 @ccccCCcCCCcccccCCccCCcccCcCCCcCccCCCc point 0 missense TCA->CCA[Ser->Pro] {F08C6.1a.1,F08C6.1a.2,F08C6.1c} 5748 CB6890_redo X 7644184 1 C G 18 1.00 63 62 2 4 6 @GgGg,, point 0 nongenic,nongenic -6889 upstream,-7153 upstream {F27D9.3},{F26A10.2} 5749 CB6890_redo X 7649426 1 A G 167 1.00 63 62 0 8 8 @GGGGggGG point 0 nongenic,nongenic -12395 upstream,-1647 upstream {F26A10.2},{F27D9.3} 5750 CB6890_redo X 7671835 1 G C 84 1.00 63 26 4 9 13 @ccCcccccC.,., point 0 nongenic,nongenic -1099 upstream,-2462 upstream {F27D9.2},{F27D9.7} 5751 CB6890_redo X 7671837 1 T G 27 1.00 63 62 4 6 10 @gggggG.,., point 0 nongenic,nongenic -1097 upstream,-2464 upstream {F27D9.2},{F27D9.7} 5752 CB6890_redo X 7689681 1 T C 56 1.00 63 12 0 4 4 @CCCC point 0 nongenic,nongenic -519 upstream,850 downstream {C53C9.2},{C53C9.3a} 5755 CB6890_redo X 7729211 1 C T 255 1.00 63 62 1 25 26 @TttttTTTTtttttTTTttTtttTT. point 0 silent CTC->CTT[Leu->Leu] {K09F5.2} 5756 CB6890_redo X 7764853 1 T A 125 7.50 63 62 0 4 4 @AAAA point 0 nongenic,nongenic,nongenic -6756 upstream,1693 into,1703 into {C47C12.4},{C47C12.6.1,C47C12.6.2},{C47C12.6.3} 5761 CB6890_redo X 7771370 1 G A 236 1.00 63 62 0 18 18 @aaaaaaaaaaaaaaaaaa point 0 nongenic,nongenic,nongenic,nongenic -13273 upstream,3389 into,3390 into,3488 into {C47C12.4},{C47C12.6.2},{C47C12.6.3},{C47C12.6.1} 5766 CB6890_redo X 7771436 1 A T 74 1.25 63 62 0 5 5 @TTTTT point 0 nongenic,nongenic,nongenic,nongenic -13339 upstream,3323 into,3324 into,3422 into {C47C12.4},{C47C12.6.2},{C47C12.6.3},{C47C12.6.1} 5769 CB6890_redo X 7841129 1 G T 218 1.00 63 62 3 13 16 @tttTTtttTTttt,.. point 0 nongenic -1445 upstream {C54D2.1} 5770 CB6890_redo X 7841134 1 T A 32 1.00 63 62 4 6 10 @aAAaaa,.., point 0 nongenic -1440 upstream {C54D2.1} 5772 CB6890_redo X 7872981 1 C A 255 1.00 63 62 0 31 31 @aAaAAaaAaAaaaAAaaAaAaaAAaaAaaAA point 0 SNP none {haw105178} 5773 CB6890_redo X 7984029 1 C A 8 1.00 63 62 3 3 6 @..,aaA point 0 nongenic,nongenic -1897 upstream,-2008 upstream {F45E1.4},{F45E1.6.1} 5775 CB6890_redo X 8026787 1 G T 14 1.00 63 62 3 4 7 @,,.TTtt point 0 three_prime_UTR none {C34D10.2.1,C34D10.2.2} 5776 CB6890_redo X 8029563 1 C T 255 1.00 63 62 0 24 24 @TtTTTTtTTTTTTTtTTTTtttTT point 0 SNP none {haw105378} 5777 CB6890_redo X 8033820 1 G C 255 1.00 63 62 0 11 11 @CcCCccCCCcc point 0 missense GCC->GGC[Ala->Gly] {C18A11.6} 5778 CB6890_redo X 8037653 1 C T 255 1.00 63 62 0 28 28 @TttTTtttTTTTTtTTtttTttttttTt point 0 nongenic,nongenic -2892 upstream,-3616 upstream {C18A11.6},{C18A11.5a,C18A11.5b,C18A11.5c} 5779 CB6890_redo X 8076590 1 A T 119 1.00 63 62 0 4 4 @tTtT point 0 nongenic -1097 upstream {C46F2.1} 5784 CB6890_redo X 8210413 1 C T 255 1.00 63 62 0 32 32 @TtttttttttttTTttttTTttttttttTTTT point 0 missense GCG->ACG[Ala->Thr] {C47D2.2} 5785 CB6890_redo X 8210535 1 C T 255 1.00 63 62 0 21 21 @tTTTtTTTtttttTTTTTtTt point 0 nongenic,nongenic,nongenic -4483 upstream,-6808 upstream,556 into {C47D2.1},{C17H11.6c.1},{C47D2.2} 5787 CB6890_redo X 8319631 1 C T 207 2.00 63 62 13 31 44 @t,tt,tTTtTttt,ttTt,tt,,,,,,ttTTtt,TtTtt,tt,t point 0 missense GGA->AGA[Gly->Arg] {R09F10.7} 5788 CB6890_redo X 8325358 1 G T 125 1.00 63 62 2 7 9 @.,TttTttt point 0 missense CAA->AAA[Gln->Lys] {R09F10.8.1,R09F10.8.2} 5794 CB6890_redo X 8417121 1 C T 255 1.00 63 62 0 29 29 @tTTttTttTtTtTTtTTtTTttTTttttt point 0 nongenic,nongenic -261 upstream,242 downstream {F08F1.5},{F08F1.6} 5798 CB6890_redo X 8550626 1 C A 7 1.00 63 62 2 3 5 @,.Aaa point 0 nongenic,nongenic -1575 upstream,-1711 upstream {D2021.2a},{D2021.4a,D2021.4b} 5799 CB6890_redo X 8601954 1 T A 49 1.00 63 62 3 7 10 @,,.AAaaAaa point 0 silent GTT->GTA[Val->Val] {F18E9.1} 5800 CB6890_redo X 8601955 1 A C 77 1.00 63 48 3 7 10 @,,.CCccCcc point 0 missense ACT->CCT[Thr->Pro] {F18E9.1} 5801 CB6890_redo X 8602905 1 T G 82 1.00 63 42 0 4 4 @ggGG point 0 nongenic,nongenic 558 downstream,779 downstream {H35N09.2},{F18E9.1} 5806 CB6890_redo X 8603049 1 A G 137 1.00 63 62 0 6 6 @ggGGGg point 0 nongenic,nongenic 414 downstream,923 downstream {H35N09.2},{F18E9.1} 5807 CB6890_redo X 8629824 1 A C 255 1.00 63 62 0 36 36 @CCcccccCcCCcccCCcccCCcCCCcCCCCCccCcc point 0 SNP none {haw105786} 6922 CB6890_redo X 8630461 0 X X -1000 -999.99 -1000 -1000 5 0 5 @..,,,TtTTt indel 0 nongenic -5281 upstream {K01A12.3} 5808 CB6890_redo X 8647767 1 C G 255 1.00 63 62 0 28 28 @GgGGGGGgGggGggGgggGGggggGGgg point 0 nongenic,nongenic -13467 upstream,-728 upstream {K09E2.4a},{F12D9.2} 5811 CB6890_redo X 8804917 1 A G 255 1.00 63 62 0 25 25 @gGGgGGGGGGGGGGgGGGGGgGGGg point 0 nongenic,nongenic -1791 upstream,1135 into {R04E5.8b},{R04E5.8a} 5816 CB6890_redo X 8941347 1 C T 96 1.00 63 62 3 6 9 @,,.tTtTtT point 0 missense CGA->CAA[Arg->Gln] {D1073.1a,D1073.1b} 5817 CB6890_redo X 9078265 1 C G 4 2.12 63 48 4 4 8 @,gggg,,, point 0 nongenic,nongenic -4631 upstream,711 downstream {H08J11.2},{F47E1.1} 5824 CB6890_redo X 9098563 1 C T 255 1.00 63 62 0 38 38 @tTtTTtTTttTTTTTTTttttTtTttttTttTTTTTtt point 0 missense GCT->GTT[Ala->Val] {C25A11.4a,C25A11.4b,C25A11.4c,C25A11.4d} 5825 CB6890_redo X 9137584 1 A C 37 1.00 63 62 2 4 6 @CcCC,, point 0 nongenic,nongenic -278 upstream,-411 upstream {B0563.6c},{B0563.6a} 5826 CB6890_redo X 9171369 1 G T 255 1.00 63 62 0 37 37 @TTtTtttTtTTTtTttttttTTTTtttTtTTtttTtt point 0 SNP none {haw106181} 5828 CB6890_redo X 9188219 1 C T 255 4.38 63 62 43 212 255 @..,,,t...,,,,,...,,,,,t.,,.,,.....tTTTTTTTtTTTttTTtTtttttt.TTTTttttTTTTTt.tTTTtTTTTTTttTTTtttttTTTT point 0 SNP none {haw106187} 5831 CB6890_redo X 9198471 1 A G 9 1.00 63 4 1 5 6 @GgGGG. point 0 nongenic -12699 upstream {C35B8.4} 5832 CB6890_redo X 9198534 1 A G 26 1.00 63 62 3 4 7 @,..gGGg point 0 nongenic -12636 upstream {C35B8.4} 5833 CB6890_redo X 9205411 1 C T 29 1.00 63 62 4 5 9 @,..,tttTT point 0 nongenic -5759 upstream {C35B8.4} 5834 CB6890_redo X 9212879 1 T G 29 1.00 63 62 1 3 4 @.ggg point 0 nongenic,nongenic -1007 upstream,798 downstream {C35B8.3a.1},{C35B8.4} 5835 CB6890_redo X 9267577 1 C T 255 1.00 63 62 0 41 41 @TTtTTtttTtTTTTTttttttTTtttTTTTTTtTTttTtTt point 0 nongenic,nongenic -3312 upstream,989 downstream {F18G5.6},{B0416.5a} 6934 CB6890_redo X 9328749 0 X X -1000 -999.99 -1000 -1000 6 -3 3 @.,,,,.TTTTtt indel 0 nongenic,nongenic -2329 upstream,-9635 upstream {T20B5.2},{F35G8.1} 5836 CB6890_redo X 9420384 1 C T 255 1.00 63 62 0 20 20 @tTtttTTttTTTtTTTtttt point 0 missense CCG->TCG[Pro->Ser] {C23F12.1a,C23F12.1b} 5837 CB6890_redo X 9460186 1 A C 191 2.00 63 62 7 32 39 @c,ccCccC,cCCCcC,CCcC,Ccc,Ccc,c,cCccCCCc point 0 missense GAT->GAG[Asp->Glu] {ZK899.5} 5838 CB6890_redo X 9462102 1 T C 255 1.38 63 62 0 26 26 @CCccCccccccCCCccccCccccCcc point 0 nongenic,nongenic -1186 upstream,-1234 upstream {ZK899.6},{ZK899.5} 5839 CB6890_redo X 9498320 1 G T 68 1.00 63 30 1 3 4 @TTt, point 0 nongenic,nongenic,nongenic,nongenic,nongenic -3232 upstream,11008 into,17505 into,18058 into,3093 into {ZK899.8f},{ZK899.8e},{ZK899.8b,ZK899.8c,ZK899.8d},{ZK899.8a},{ZK899.8h} 5840 CB6890_redo X 9503788 1 A G 255 1.00 63 62 0 30 30 @GGGGgggGGGggGGgGGgGgGGggGgGGGG point 0 nongenic,nongenic,nongenic,nongenic,nongenic -6671 upstream,12037 into,12590 into,2236 into,8561 into {ZK899.8i},{ZK899.8b,ZK899.8c,ZK899.8d,ZK899.8e},{ZK899.8a},{ZK899.8f},{ZK899.8h} 5841 CB6890_redo X 9536669 1 T A 255 1.00 63 62 0 23 23 @aAAAAAAaAaaAAAAaaaAaaaa point 0 SNP none {haw106328} 5846 CB6890_redo X 9703760 1 T A 190 1.00 63 62 0 9 9 @AAAAAAAAA point 0 nongenic -3113 upstream {F15G9.1a} 5847 CB6890_redo X 9703853 1 T C 211 1.06 63 62 0 12 12 @CCCCCCCCCCCC point 0 nongenic -3020 upstream {F15G9.1a} 5848 CB6890_redo X 9774476 1 A G 255 1.00 63 62 0 26 26 @gGGgGGGGgGGGggGgggggGGGGgG point 0 SNP none {haw106424} 5849 CB6890_redo X 9861507 1 G T 255 1.00 63 62 0 40 40 @tTTTTtTTttttTtTTttttTTttttttTtttTTtttTTT point 0 missense,SNP AGT->ATT[Ser->Ile],none {R07B1.3},{haw106438} 5850 CB6890_redo X 9882632 1 A C 255 1.00 63 62 0 31 31 @CcCCCcCCCCCCCCCccCCCCcCCCcCcccC point 0 nongenic,nongenic -1579 upstream,-491 upstream {F21G4.2},{R07B1.12} 6939 CB6890_redo X 9999376 0 X X -1000 -999.99 -1000 -1000 2 -1 1 @.,gggg indel 0 nongenic,nongenic -1497 upstream,-263 upstream {F19C6.2a,F19C6.2b},{F19C6.1} 5851 CB6890_redo X 9999591 1 A G 255 1.00 63 62 0 16 16 @GggggggggggggGgG point 0 nongenic,nongenic -1281 upstream,-478 upstream {F19C6.2a,F19C6.2b},{F19C6.1} 6940 CB6890_redo X 10071939 0 X X -1000 -999.99 -1000 -1000 1 1 2 @.CCc indel 0 nongenic,nongenic -2221 upstream,685 downstream {ZC373.4},{ZC373.5} 5852 CB6890_redo X 10130976 1 T G 188 1.00 63 62 2 15 17 @GGGGGGGGGG.G.gGgG point 0 SNP none {haw106550} 5853 CB6890_redo X 10150694 1 C T 255 1.00 63 62 0 20 20 @TtTTTTtTTTTTTtTgttTt point 0 missense CCG->TCG[Pro->Ser] {F09B9.2a,F09B9.2b} 5854 CB6890_redo X 10284390 1 T A 255 1.00 63 62 0 37 37 @AAaaAAaaaAAaaaAaaAAaAAAAAAaAaaAAAAAAA point 0 missense ATT->TTT[Ile->Phe] {F41E7.3} 5855 CB6890_redo X 10290548 1 G T 65 1.00 63 62 3 5 8 @TTtTt.,. point 0 nongenic,nongenic -12030 upstream,-4880 upstream {F41E7.4},{F41E7.3} 5856 CB6890_redo X 10290549 1 A G 65 1.00 63 62 3 5 8 @GGgGg.,. point 0 nongenic,nongenic -12029 upstream,-4881 upstream {F41E7.4},{F41E7.3} 5866 CB6890_redo X 10421428 1 G A 255 1.00 63 62 0 19 19 @AAaaaaaaAAAaAAaaaAa point 0 SNP none {haw106854} 5867 CB6890_redo X 10439131 1 C T 255 1.00 63 62 0 31 31 @TtTTTtttttttttTTTtttTTTTTTTTTTT point 0 SNP none {haw106868} 5868 CB6890_redo X 10473878 1 G A 255 1.00 63 62 0 43 43 @AAaaAAaaaaAAaAaaaaaaAaaaaAaaAaaAaaAAAaaaAaA point 0 SNP none {haw106890} 5869 CB6890_redo X 10591190 1 G T 255 1.00 63 62 0 33 33 @TtTTTttTtttTTTTTTtTtTTTTTtTTtTTTt point 0 SNP none {haw106989} 5873 CB6890_redo X 10661155 1 T C 69 1.00 63 42 4 7 11 @....CcCCCcc point 0 nongenic,nongenic,nongenic,nongenic -1648 upstream,-3179 upstream,1887 into,5645 into {F11A1.2},{F11A1.3c},{F11A1.3b,F11A1.3d},{F11A1.3a} 5875 CB6890_redo X 10780185 1 C T 255 1.00 63 62 0 23 23 @ttTTTTTTTtTTtTTTtttTttT point 0 missense CCT->TCT[Pro->Ser] {T05A10.1a,T05A10.1c,T05A10.1d,T05A10.1e,T05A10.1f,T05A10.1g,T05A10.1h,T05A10.1i,T05A10.1l,T05A10.1m} 5876 CB6890_redo X 10841709 1 G T 37 1.00 63 62 2 4 6 @,,tTTt point 0 nongenic,nongenic -8213 upstream,899 downstream {C05A9.3},{C05A9.2} 5877 CB6890_redo X 10845087 1 T C 123 1.00 63 62 0 5 5 @CCCCC point 0 nongenic -485 upstream {C05A9.2} 6946 CB6890_redo X 11166946 0 X X -1000 -999.99 -1000 -1000 4 -2 2 @,,..aa indel 0 nongenic,nongenic -11880 upstream,-3062 downstream {F13D2.2},{F13D2.1} 5878 CB6890_redo X 11269070 1 G T 34 1.00 63 62 2 4 6 @Tttt,. point 0 nongenic,nongenic -119 upstream,-2041 upstream {C03A3.3},{F38B2.1a,F38B2.1c.4} 5879 CB6890_redo X 11303751 1 C T 255 1.00 63 62 0 29 29 @TTtTtTTTTTttttTtTtTTttTTTTttT point 0 nongenic,nongenic -3543 upstream,1750 into {F08G12.4},{F08G12.1} 5882 CB6890_redo X 11428228 1 A T 42 1.00 63 28 2 4 6 @.,tttt point 0 nongenic,nongenic,nongenic -11737 upstream,-2271 upstream,5223 into {F46C3.7},{F46C3.3b},{F46C3.3a} 5883 CB6890_redo X 11428229 1 T G 29 1.00 63 42 2 5 7 @.,ggggg point 0 nongenic,nongenic,nongenic -11736 upstream,-2272 upstream,5222 into {F46C3.7},{F46C3.3b},{F46C3.3a} 6950 CB6890_redo X 11492873 2 X X -1000 -999.99 -1000 -1000 5 -4 1 @..,,. indel -2 SNP none {uCE6-1222} 5892 CB6890_redo X 11600446 1 C A 255 1.00 63 62 0 41 41 @AAaAAaAAaAAAAAAaAaAaaaaaAaAAaaaaAAAAAaaAA point 0 SNP none {haw107592} 5893 CB6890_redo X 11624629 1 T C 255 1.00 63 62 0 38 38 @CcCCccCCCcCCCCCCCCcccCcCcCCCcccCCCccCc point 0 missense,SNP GAT->GGT[Asp->Gly],none {Y71H9A.1},{haw107616} 6952 CB6890_redo X 11654822 4 X X -1000 -999.99 -1000 -1000 5 -3 2 @,...,aAAAAaa indel -4 nongenic,nongenic,nongenic,nongenic -3539 upstream,-3979 upstream,1332 into,964 into {T04F8.3},{T04F8.4},{T04F8.2.1},{T04F8.2.2} 5894 CB6890_redo X 11690021 1 A C 44 1.00 63 62 2 4 6 @..CCcC point 0 nongenic,nongenic -1826 upstream,-215 upstream {C44C10.7},{C44C10.10} 5895 CB6890_redo X 11730954 1 C T 255 1.00 63 62 0 25 25 @TTtTTTTTTTTTTTtTTttTtTTTt point 0 nongenic,nongenic -8019 upstream,1168 into {C40H5.1},{D1053.3} 5913 CB6890_redo X 11831508 1 C A 255 2.88 63 62 0 40 40 @aaaaaaaaaaaAAAaaAAaaaAaaaAaaAaaaAaaaAAaa point 0 nongenic 4532 into {C34E11.3} 5914 CB6890_redo X 11831549 1 T C 255 2.56 63 62 0 32 32 @cCCccCcCCCcCCccCCCCccCCCcCCCCCcC point 0 nongenic 4491 into {C34E11.3} 5915 CB6890_redo X 11842338 1 C T 255 1.00 63 62 0 32 32 @ttTTTTtTTTTttTTTTTTTtTTtTTtttTtT point 0 nongenic,nongenic -1250 upstream,-4938 upstream {F54F7.2},{F54F7.1} 5926 CB6890_redo X 12023120 1 C A 255 2.56 63 62 0 30 30 @AAaaAaaaaAaaAaaAAaaaaaaaAaaaaa point 0 nongenic -6629 upstream {B0198.2} 5933 CB6890_redo X 12277005 1 T C 3 2.50 0 14 1 4 5 @cc,cc point 0 nongenic,nongenic -1404 upstream,-3624 upstream {C04B4.6},{C04B4.1.1} 5934 CB6890_redo X 12277006 1 C T 15 2.50 0 2 0 5 5 @ttTtt point 0 nongenic,nongenic -1405 upstream,-3623 upstream {C04B4.6},{C04B4.1.1} 5935 CB6890_redo X 12277112 1 A G 194 1.00 63 62 0 12 12 @gGGGGGGGggGG point 0 nongenic,nongenic -1511 upstream,-3517 upstream {C04B4.6},{C04B4.1.1} 5936 CB6890_redo X 12277116 1 A T 255 1.00 63 62 0 17 17 @tTTTTTTTttTTTTTTt point 0 nongenic,nongenic -1515 upstream,-3513 upstream {C04B4.6},{C04B4.1.1} 5937 CB6890_redo X 12277171 1 A T 210 2.75 63 62 0 17 17 @TTTtTttTTTTTtTtTT point 0 nongenic,nongenic -1570 upstream,-3458 upstream {C04B4.6},{C04B4.1.1} 5939 CB6890_redo X 12277289 1 C T 4 2.31 0 26 8 15 23 @T,tTTTTttTTT,t.,t,.,t,t point 0 nongenic,nongenic -1688 upstream,-3340 upstream {C04B4.6},{C04B4.1.1} 5940 CB6890_redo X 12277312 1 A G 5 2.75 0 26 3 11 14 @g,gGg,g.GGGGgg point 0 nongenic,nongenic -1711 upstream,-3317 upstream {C04B4.6},{C04B4.1.1} 5942 CB6890_redo X 12277622 1 T G 255 1.19 63 62 0 39 39 @gggGggggGGgGgGgggGggGGgGGggGGGGgGGgggGG point 0 nongenic,nongenic -2021 upstream,-3007 upstream {C04B4.6},{C04B4.1.1} 5945 CB6890_redo X 12277788 1 C T 3 2.12 0 4 9 17 26 @TTTT,t,TTT,T.T,.TTTtT.tT,. point 0 nongenic,nongenic -2187 upstream,-2841 upstream {C04B4.6},{C04B4.1.1} 5949 CB6890_redo X 12278193 1 T G 4 8.50 0 26 3 14 17 @gggg.G,GGGGG,Gggg point 0 nongenic,nongenic -2436 upstream,-2592 upstream {C04B4.1.1},{C04B4.6} 5951 CB6890_redo X 12278330 1 A C 4 5.06 0 26 0 13 13 @cCCCCCCccCttc point 0 nongenic,nongenic -2299 upstream,-2729 upstream {C04B4.1.1},{C04B4.6} 5955 CB6890_redo X 12279251 1 T C 3 9.00 0 4 3 4 7 @CCCC,.. point 0 nongenic,nongenic -1378 upstream,-3650 upstream {C04B4.1.1},{C04B4.6} 6957 CB6890_redo X 12416664 0 X X -1000 -999.99 -1000 -1000 4 -1 3 @,,..aaaa indel 0 nongenic,nongenic -2715 upstream,-9061 upstream {F17E5.1a},{T24D3.2.2} 5959 CB6890_redo X 12492651 1 T G 61 1.00 63 42 2 4 6 @,,GGGG point 0 nongenic -135 upstream {F45E6.4} 5965 CB6890_redo X 12560995 1 T C 255 1.00 63 62 0 10 10 @cccccCCCCc point 0 nongenic,nongenic -12995 upstream,-9395 upstream {T24D5.1},{C16D6.2} 5968 CB6890_redo X 12589644 1 T G 24 1.00 63 62 3 10 13 @GGGGGGGGG.G.. point 0 nongenic,nongenic -3282 upstream,-7445 upstream {T24D5.2},{T24D5.4} 6959 CB6890_redo X 12600324 0 X X -1000 -999.99 -1000 -1000 5 -1 4 @,,...Aa indel 0 nongenic,nongenic -1104 upstream,-2627 upstream {T24D5.5},{T24D5.6} 5969 CB6890_redo X 12642762 1 A G 47 1.00 63 62 3 5 8 @...GGGGG point 0 SNP none {haw107971} 6960 CB6890_redo X 12642997 0 X X -1000 -999.99 -1000 -1000 1 1 2 @G,CcC indel 0 nongenic,nongenic -2586 upstream,-4633 upstream {R09A8.5},{H36L18.1} 5970 CB6890_redo X 12702527 1 C T 255 1.00 63 62 0 31 31 @tttttttttTTttTTtttTTtTTtTTtTTtT point 0 nongenic,nongenic,nongenic -567 upstream,-598 upstream,756 downstream {T07C5.3a},{T07C5.3b},{T07C5.2} 5971 CB6890_redo X 12786146 1 G C 255 1.00 63 62 0 29 29 @CcccccCccccCCCcCCCCCcCccccccc point 0 missense,SNP TGG->TGC[Trp->Cys],none {T22H6.2a,T22H6.2b},{haw107989} 5972 CB6890_redo X 12795967 1 C A 255 1.00 63 62 0 31 31 @aAaaaaAaAaaaaaaAAaaaaAAAaAaaAaA point 0 SNP,three_prime_UTR none,none {haw107990},{T22H6.6a,T22H6.6b} 5974 CB6890_redo X 13034301 1 T A 255 1.00 63 62 0 32 32 @AaAaaAAAAaaAaAaAaAaAaAaAAaAAaaAa point 0 SNP none {haw108272} 5975 CB6890_redo X 13041027 1 A C 85 1.00 63 62 5 7 12 @CccccCc,.... point 0 SNP none {haw108284} 5976 CB6890_redo X 13048309 1 C T 255 1.00 63 62 0 24 24 @ttttTTTTtTTTtTTtTtTttTTt point 0 nongenic,nongenic -170 upstream,-26363 upstream {C53C7.3},{C53C7.1a,C53C7.1b} 5978 CB6890_redo X 13202432 1 A G 8 1.75 63 40 1 3 4 @G.gg point 0 nongenic -9879 upstream {R12H7.1} 5979 CB6890_redo X 13202438 1 A C 43 1.62 63 62 1 4 5 @C.ccc point 0 nongenic -9873 upstream {R12H7.1} 6966 CB6890_redo X 13261607 0 X X -1000 -999.99 -1000 -1000 3 0 3 @,,,cc indel 0 nongenic,nongenic -815 upstream,786 downstream {K09A11.1},{K08H2.10} 5980 CB6890_redo X 13384402 1 T A 255 1.00 63 62 0 18 18 @aaAaAaaaaaAaaaAAAA point 0 SNP none {haw108496} 5982 CB6890_redo X 13437208 1 C T 211 3.12 63 62 1 18 19 @tttttt.tttttttttttt point 0 nongenic,nongenic -5688 upstream,832 into {C29F7.5},{C29F7.6} 5983 CB6890_redo X 13480349 1 T A 255 1.00 63 62 0 36 36 @AaaAaAAAAaAAaaaaaAAaaAAAaaaAaaaaaaAA point 0 missense,SNP AAC->ATC[Asn->Ile],none {F15A2.4},{haw108526,uCE6-1345} 6969 CB6890_redo X 13481140 1 X X -1000 -999.99 -1000 -1000 6 -1 5 @,,,,,. indel -1 SNP none {uCE6-1346} 5987 CB6890_redo X 13514436 1 C T 255 1.00 63 62 0 60 60 @ttttttttttttTTTTtTTTtTTtTttTtTTTtTTTttttTTtTTtTTtTtTtTTTTtTt point 0 nongenic -3417 upstream {H06A10.2} 6971 CB6890_redo X 13527874 0 X X -1000 -999.99 -1000 -1000 2 0 2 @,.AAA indel 0 nongenic,nongenic,nongenic -1133 upstream,-537 upstream,-586 upstream {F18H3.4.1},{F18H3.3a.1},{F18H3.3a.3} 5990 CB6890_redo X 13652600 1 C T 23 1.00 63 24 2 2 4 @,,tt point 0 nongenic,nongenic -7839 upstream,941 downstream {C04A11.1},{C40C9.4} 5991 CB6890_redo X 13652601 1 G C 25 1.00 63 22 2 2 4 @,,cc point 0 nongenic,nongenic -7838 upstream,942 downstream {C04A11.1},{C40C9.4} 6972 CB6890_redo X 13656725 3 X X -1000 -999.99 -1000 -1000 7 -5 2 @.,.,.., indel -3 SNP none {uCE6-1357} 5995 CB6890_redo X 13737752 1 G T 255 1.00 63 62 0 38 38 @tttTttTTTtttttTttTTtttTTtTTtTtTTtTTttt point 0 SNP none {haw108674,uCE6-1361} 5996 CB6890_redo X 13738979 1 G C 45 1.00 63 12 0 8 8 @CCCcccct point 0 nongenic -8258 upstream {K11E4.5a} 5997 CB6890_redo X 13738980 1 C T 12 1.00 63 44 1 6 7 @TTtttt. point 0 nongenic -8257 upstream {K11E4.5a} 5998 CB6890_redo X 13764186 1 G C 3 1.00 63 2 1 3 4 @CC.c point 0 nongenic,nongenic 280 downstream,281 downstream {F55F3.2b},{F55F3.2a} 5999 CB6890_redo X 13764187 1 A C 3 1.00 63 2 0 4 4 @CGcc point 0 nongenic,nongenic 281 downstream,282 downstream {F55F3.2b},{F55F3.2a} 6000 CB6890_redo X 13794627 1 C G 3 7.00 63 0 3 6 9 @,.g,ggggg point 0 nongenic -1106 upstream {ZK1086.2} 6002 CB6890_redo X 13851834 1 C T 255 1.00 63 62 0 26 26 @TttttTTttTttTtTTtttTTTttTt point 0 nongenic -994 upstream {M03B6.2} 6003 CB6890_redo X 13936891 1 A C 36 1.00 63 30 3 4 7 @..,cCcc point 0 nongenic,nongenic -1773 upstream,2086 into {K02B9.4a},{K02B9.4b} 6005 CB6890_redo X 14031541 1 G A 33 1.00 63 58 9 9 18 @,,,,,..,,aaAAaAAaA point 0 nongenic -2174 upstream {C04C11.2.2} 6006 CB6890_redo X 14118935 1 A G 104 1.00 63 62 0 8 8 @GGGGGGGG point 0 nongenic,nongenic -8867 upstream,1926 into {F28H6.4},{F28H6.6} 6014 CB6890_redo X 14248169 1 C A 255 1.00 63 62 0 20 20 @AAaaaAAaAAAAaAaaaaaA point 0 missense GAC->GAA[Asp->Glu] {K04C1.5} 6977 CB6890_redo X 14374967 0 X X -1000 -999.99 -1000 -1000 1 0 1 @.TTT indel 0 nongenic -15980 upstream {K04G11.5} 6017 CB6890_redo X 14375235 1 T C 160 1.00 63 62 0 7 7 @CCCCCCC point 0 SNP none {uCE6-1407} 6018 CB6890_redo X 14379009 1 T C 23 5.81 0 22 0 20 20 @cccccccCccCccccccCCC point 0 nongenic,nongenic -1757 upstream,-4162 upstream {Y60A9A.1},{Y60A9.3} 6019 CB6890_redo X 14381923 1 G A 255 1.00 63 62 0 46 46 @aAAAAAaaaAaAaaAaaaaaaaaAAAAAAAAAAaAAaAAAaAaAaA point 0 SNP none {haw109439} 6029 CB6890_redo X 14510694 1 G A 229 3.25 63 62 0 19 19 @aaaaaaaaaaaaaaaaaaa point 0 nongenic,nongenic -6932 upstream,532 downstream {M163.1},{D1025.3} 6030 CB6890_redo X 14510701 1 T G 209 3.19 63 62 0 20 20 @gggggggggggggggggggg point 0 nongenic,nongenic -6939 upstream,525 downstream {M163.1},{D1025.3} 6031 CB6890_redo X 14573705 1 G A 5 1.00 63 62 4 4 8 @,.,,aAAa point 0 nongenic,nongenic,nongenic -4170 upstream,1066 into,4910 into {C44H4.2},{C44H4.1},{H01A20.2} 6032 CB6890_redo X 14573707 1 A G 62 1.00 63 4 3 5 8 @.,,gGGgG point 0 nongenic,nongenic,nongenic -4168 upstream,1068 into,4912 into {C44H4.2},{C44H4.1},{H01A20.2} 6033 CB6890_redo X 14574517 1 C A 35 1.00 63 20 2 8 10 @AAaAaaAa,. point 0 missense CAG->AAG[Gln->Lys] {C44H4.1} 6034 CB6890_redo X 14577774 1 T A 255 1.00 63 62 0 22 22 @aAaAAaaaAaaAaaaaaaaaaA point 0 nongenic,nongenic -101 upstream,6732 into {C44H4.2},{H01A20.2} 6035 CB6890_redo X 14595719 1 A T 124 1.00 63 62 3 8 11 @TTTTTTtt,.. point 0 three_prime_UTR none {C44H4.8} 6036 CB6890_redo X 14613805 1 C A 255 1.00 63 62 0 26 26 @AAaaaAaAAAaAAaaaAaAaAAaaaa point 0 ncRNA,silent none,CGA->AGA[Arg->Arg] {F54E4.1b},{F54E4.1a} 6038 CB6890_redo X 14621700 1 T C 20 1.00 63 48 3 4 7 @Cccc... point 0 ncRNA none {F54E4.1b} 6039 CB6890_redo X 14634338 1 A G 38 1.00 63 40 1 4 5 @gGGG, point 0 missense TCG->CCG[Ser->Pro] {F54E4.3} 6040 CB6890_redo X 14637664 1 A C 255 1.00 63 62 0 25 25 @CCCCCCccCCCCCCCcCcCCCCCCC point 0 nongenic -1335 upstream {F54E4.3} 6042 CB6890_redo X 14728295 1 A G 43 1.00 63 62 0 5 5 @GGGTG point 0 nongenic,nongenic -3915 upstream,1108 into {F33C8.4},{F33C8.3} 6047 CB6890_redo X 14767044 1 C G 255 1.00 63 62 0 44 44 @GGGGGGGgGGGgGGGgggGGGGGggGgGGgGGGGggGGGgggGG point 0 missense GAA->CAA[Glu->Gln] {Y16B4A.2} 6054 CB6890_redo X 14913406 1 G T 255 1.00 63 62 0 39 39 @tttttttttttTTttTtTttTtTTtTttttTttTTtTtT point 0 SNP none {haw110147} 6055 CB6890_redo X 14921904 1 G A 255 1.00 63 62 0 24 24 @aaaaaaaaaaaaAAaAaaaAaaAa point 0 SNP none {haw110159} 6056 CB6890_redo X 14921912 1 A G 255 1.00 63 62 0 23 23 @gggggggggggGGgGgggGggGg point 0 SNP none {haw110160} 6057 CB6890_redo X 14921945 1 T C 67 1.00 63 62 1 5 6 @C.cccc point 0 nongenic,nongenic -16762 upstream,1864 into {Y70D2A.2},{Y70D2A.1} 6059 CB6890_redo X 14945493 1 T C 255 1.06 63 62 0 25 25 @CCCCccccCCCCcCcCccCCccccc point 0 SNP none {haw110192} 6062 CB6890_redo X 14947981 1 A C 23 1.00 63 18 0 6 6 @cccccc point 0 nongenic -1743 upstream {F14F4.3a,F14F4.3b} 6063 CB6890_redo X 14962448 1 A T 255 1.00 63 62 0 19 19 @ttttttttttttttttTtT point 0 nongenic,nongenic -393 upstream,-995 upstream {F45B8.2},{F45B8.3} 6069 CB6890_redo X 15088627 1 G A 255 1.00 63 62 0 39 39 @aAAAaAAAaAAAAAAaAaAAAaaAaAaAaAAaAAAAAAa point 0 nongenic,nongenic -689 upstream,571 downstream {F09B12.6},{F09B12.5} 6074 CB6890_redo X 15192240 1 A T 19 1.00 63 22 2 3 5 @.,Ttt point 0 ncRNA none {T10B10.4b} 6075 CB6890_redo X 15192241 1 G A 23 1.00 63 18 2 4 6 @.,AaaA point 0 ncRNA none {T10B10.4b} 6079 CB6890_redo X 15207906 1 C T 21 1.00 63 2 0 7 7 @TTTTTTT point 0 nongenic -8848 upstream {T10B10.5} 6080 CB6890_redo X 15207908 1 A C 13 1.00 63 2 0 5 5 @CCCCC point 0 nongenic -8850 upstream {T10B10.5} 6083 CB6890_redo X 15207922 1 G T 172 1.00 63 62 0 6 6 @tttTTT point 0 nongenic -8864 upstream {T10B10.5} 6084 CB6890_redo X 15226797 1 G T 255 1.06 63 62 0 27 27 @TTtTTTTTTTtTTtTtTTttttTTtTt point 0 missense,SNP CCT->CAT[Pro->His],none {H03A11.2},{haw110591} 6085 CB6890_redo X 15226859 1 C T 255 6.62 63 62 31 35 66 @,.t,tt,tTtTt,T,TT,t,,,,,,t,.t.,,..,,,.t.,.t.t,t,t.tTTtttttttTtTttt point 0 silent AAG->AAA[Lys->Lys] {H03A11.2} 6086 CB6890_redo X 15252247 1 A T 255 1.00 63 62 0 20 20 @TTtTTtTttTTTTTttTTTt point 0 SNP none {haw110617,snp_F46F2[2]} 6087 CB6890_redo X 15447753 1 C T 236 1.62 63 62 0 20 20 @TTTTTTTTTTTTTTTTTTTT point 0 nongenic,nongenic -14011 upstream,1103 into {R03A10.6.1},{R03A10.5} 6088 CB6890_redo X 15461258 1 A T 116 1.00 63 62 0 9 9 @GgggTTttt point 0 nongenic -506 upstream {R03A10.6.1} 6091 CB6890_redo X 15520197 1 A G 221 1.00 63 62 0 13 13 @CgggggGgggcGg point 0 ncRNA none {H30A04.1c} 6093 CB6890_redo X 15622843 1 T G 12 1.00 63 62 4 5 9 @GGGGG.... point 0 nongenic,nongenic,nongenic,nongenic,nongenic -6399 upstream,2422 into,2433 into,587 into,615 into {K09E9.2.1},{K09E9.1.3},{K09E9.1.1},{K09E9.1.4},{K09E9.1.2} 6094 CB6890_redo X 15722216 1 A G 255 1.00 63 62 0 31 31 @gGGGggGggGGggggGGggGGGGggggggGg point 0 nongenic,nongenic -3834 upstream,1025 into {ZK662.4.1,ZK662.4.2},{ZK662.5} 6114 CB6890_redo X 15816871 1 A T 4 1.00 63 62 3 4 7 @...Tttt point 0 nongenic -4471 upstream {Y7A5A.8} 6115 CB6890_redo X 15836084 1 A G 255 1.19 63 62 0 16 16 @GGGGGGGgGGGGGGGG point 0 nongenic,nongenic -5408 upstream,2112 into {F59F4.2},{F59F4.1} 6116 CB6890_redo X 15836927 1 T C 255 1.00 63 62 0 27 27 @cCCcCccCCcCccCCcccCcCcCcccc point 0 missense ACA->GCA[Thr->Ala] {F59F4.1} 6117 CB6890_redo X 15842116 1 T C 33 1.00 63 4 3 3 6 @CcC... point 0 three_prime_UTR none {F59F4.2} 6119 CB6890_redo X 15904379 1 C A 255 1.00 63 62 0 41 41 @AaaaAAAaaAaaAaaaaAAAaaaAAAaaaaAaaAAaaaAaa point 0 nongenic,nongenic -16871 upstream,-6178 upstream {F53H4.3},{F31B9.1} 6120 CB6890_redo X 15904380 1 A C 255 1.00 63 62 0 40 40 @cccCCCccCccCccccCCCcccCCCccccCccCCcccCcc point 0 SNP none {haw111415} 6122 CB6890_redo X 15904862 1 T A 255 1.00 63 62 0 16 16 @aaAAAaAaaaaaAAaA point 0 nongenic,nongenic -17354 upstream,-5695 upstream {F53H4.3},{F31B9.1} 6123 CB6890_redo X 15925401 1 G A 3 1.00 63 0 3 6 9 @AAA,AAA,. point 0 nongenic,nongenic -1067 upstream,731 downstream {E03G2.1},{F31B9.3} 6125 CB6890_redo X 15925405 1 G A 15 1.00 63 0 0 5 5 @AAAAa point 0 nongenic,nongenic -1063 upstream,735 downstream {E03G2.1},{F31B9.3} 6126 CB6890_redo X 15945619 1 A T 255 1.00 63 62 1 32 33 @TttttTTttttTTtt.ttTtTtTTTTTTttttT point 0 SNP none {haw111469} 6127 CB6890_redo X 15945743 1 G T 165 1.00 63 62 0 9 9 @ttttTtttT point 0 nongenic,nongenic,nongenic -6498 upstream,-6550 upstream,1815 into {E03G2.2},{E03G2.4},{E03G2.3} 6128 CB6890_redo X 15945744 1 G T 161 1.00 63 62 0 7 7 @tTtttTt point 0 nongenic,nongenic,nongenic -6499 upstream,-6549 upstream,1816 into {E03G2.2},{E03G2.4},{E03G2.3} 6129 CB6890_redo X 15945755 1 A T 206 1.00 63 62 0 9 9 @TtTtTttTt point 0 nongenic,nongenic,nongenic -6510 upstream,-6538 upstream,1827 into {E03G2.2},{E03G2.4},{E03G2.3} 6130 CB6890_redo X 15965539 1 G A 255 1.00 63 62 0 52 52 @AAAAaAAaaAAaaaaaaAAAAAaaAAaAAaaAaAaAAaaaAAAAaAaaAAaA point 0 nongenic 491 downstream {C09G1.1} 6985 CB6890_redo X 16010511 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @,.,cc indel 0 nongenic -13655 upstream {C09G1.4} 6136 CB6890_redo X 16010512 1 A T 14 1.00 63 34 2 3 5 @TtT.. point 0 nongenic -13656 upstream {C09G1.4} 6137 CB6890_redo X 16010916 1 G T 255 1.00 63 62 0 12 12 @TTtTTttTTTTt point 0 SNP none {haw111536} 6138 CB6890_redo X 16010919 1 C A 255 1.00 63 62 0 12 12 @AaAAaaAAAAaA point 0 nongenic -14063 upstream {C09G1.4} 6139 CB6890_redo X 16029144 1 A C 174 1.00 63 62 0 7 7 @ccccccc point 0 nongenic -1579 upstream {B0395.2} 6141 CB6890_redo X 16071564 1 T C 27 1.19 63 16 0 5 5 @CccCC point 0 nongenic,nongenic -1256 upstream,-4182 upstream {C30F2.1},{T27A8.4} 6143 CB6890_redo X 16073852 1 T A 255 1.00 63 62 0 27 27 @aAAAAAaAAAAAaAAaaAaAAaAaAaa point 0 SNP none {haw111571,pas35293} 6144 CB6890_redo X 16102626 1 T G 255 1.00 63 62 0 58 58 @GGggGGgGGGGggGgggGggGGgggggGGgGggGggGggggggGgggGGGGGggGggg point 0 SNP none {CE6-235,haw111583} 6986 CB6890_redo X 16117724 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @..,cttt indel 0 nongenic -5946 downstream {ZK1073.2} 6145 CB6890_redo X 16140449 1 T C 255 1.00 63 62 0 37 37 @CCCcCCccCCcccCCCccCCcCCCCCcCCccccCCcc point 0 SNP,three_prime_UTR none,none {haw111604,pas34987},{F09C8.2.1} 6159 CB6890_redo X 16224804 1 A G 15 6.19 29 0 0 6 6 @GGGGGG point 0 nongenic -4575 upstream {F23A7.5} 6160 CB6890_redo X 16224806 1 T G 13 6.19 29 2 0 5 5 @GGGGG point 0 nongenic -4573 upstream {F23A7.5} 6990 CB6890_redo X 16224808 0 X X -1000 -999.99 -1000 -1000 3 -1 2 @,,T,c indel 4 nongenic -4572 upstream {F23A7.5} 6165 CB6890_redo X 16224818 1 A C 3 1.00 63 0 1 4 5 @.cccc point 0 nongenic -4561 upstream {F23A7.5} 6172 CB6890_redo X 16255156 1 G T 255 1.00 63 62 0 29 29 @tttttTtttTTtTttttTTTTTTTTtTTT point 0 nongenic,nongenic 226 into,398 into {W10G6.2a.2,W10G6.2b},{W10G6.2a.1} 6173 CB6890_redo X 16255668 1 T G 203 7.75 63 62 0 9 9 @GGgGGGGGG point 0 nongenic,nongenic 738 into,910 into {W10G6.2a.2,W10G6.2b},{W10G6.2a.1} 6174 CB6890_redo X 16255669 1 T C 205 7.75 63 62 0 9 9 @CCcCCCCCC point 0 nongenic,nongenic 739 into,911 into {W10G6.2a.2,W10G6.2b},{W10G6.2a.1} 6175 CB6890_redo X 16255728 1 T C 55 7.81 63 46 1 4 5 @C,CCC point 0 nongenic,nongenic 798 into,970 into {W10G6.2a.2,W10G6.2b},{W10G6.2a.1} 6176 CB6890_redo X 16255860 1 T A 241 1.00 63 62 0 29 29 @AAAAAAAAAAAAAAAAAAAAAAAAAAAAA point 0 SNP none {haw111737} 6177 CB6890_redo X 16256027 1 T A 36 1.00 63 62 2 2 4 @aa.. point 0 nongenic,nongenic 1097 into,1269 into {W10G6.2a.2,W10G6.2b},{W10G6.2a.1} 6181 CB6890_redo X 16417762 1 C G 255 1.00 63 62 0 33 33 @GgggggggggGgggGgggGGggGGGGGgGgggg point 0 SNP none {pas35160} 6182 CB6890_redo X 16457888 1 A G 255 1.00 63 62 0 39 39 @ggggggGGggggggGgggGgGggggGgggGGGGgggggg point 0 nongenic,nongenic -13400 upstream,580 into {F38E9.1},{F38E9.2} 6183 CB6890_redo X 16460133 1 C A 255 1.00 63 62 0 32 32 @AaaaAaaaaAaaAaaAaAaaAAaaaaaaaaAa point 0 SNP none {haw111863} 6184 CB6890_redo X 16460180 1 C A 255 1.00 63 62 0 35 35 @AaaAaAaaaaaaaAaAaAAaAaAAaAaaAAAAAAa point 0 SNP none {haw111864} 6188 CB6890_redo X 16608719 1 G A 145 1.00 63 62 6 11 17 @,,..,,aaAaaAAAAAa point 0 nongenic,nongenic,nongenic -4646 upstream,-6084 upstream,723 into {C06G1.4.1},{F59C12.4},{F59C12.3} 6189 CB6890_redo X 16661001 1 G T 121 1.00 63 62 0 7 7 @ttttttt point 0 silent CGA->AGA[Arg->Arg] {F43B10.1} 6192 CB6890_redo X 16687504 1 A G 119 1.12 63 62 2 6 8 @,.gGggGg point 0 nongenic,nongenic -1879 upstream,825 into {F22H10.4},{F22H10.5} 6193 CB6890_redo X 16787261 1 A T 255 1.00 63 62 0 31 31 @TTTtTTTTTTTtTtttTTTTTTTTtTTtttt point 0 SNP none {haw111929} 6194 CB6890_redo X 16817032 1 T C 255 1.00 63 62 0 22 22 @cCccCcCCCcCccCcCCccCcC point 0 missense AAA->GAA[Lys->Glu] {F41G4.3a,F41G4.3b} 6195 CB6890_redo X 16866967 1 T A 255 1.00 63 62 0 42 42 @aaAaAAaaAAAaaaaaaaAaaaaAAAAAAAaaAAAAAAaAAa point 0 nongenic,nongenic -5875 upstream,970 into {T20F7.1},{T20F7.6} 6205 CB6890_redo X 16959644 1 C T 30 1.00 63 8 2 7 9 @tttTTtT,. point 0 nongenic,nongenic -4141 upstream,-7613 upstream {F52G3.1.1},{F52G3.4} 6206 CB6890_redo X 16959645 1 T C 9 1.00 63 30 2 4 6 @CCcC,. point 0 nongenic,nongenic -4140 upstream,-7614 upstream {F52G3.1.1},{F52G3.4} 6207 CB6890_redo X 16981399 1 A C 126 0.00 63 62 0 4 4 @CCCC point 0 nongenic,nongenic -20248 upstream,-5351 upstream {K02H8.1,K02H8.1b,K02H8.1c},{F52G3.5} 6208 CB6890_redo X 16981415 1 T C 221 1.00 63 62 0 13 13 @CCCCCCCCCCCCC point 0 SNP none {haw111956} 6209 CB6890_redo X 17025320 1 A T 235 1.00 63 62 0 10 10 @tTTTtTTTTt point 0 nongenic,nongenic,nongenic -4597 upstream,1098 into,3583 into {F35B3.4},{F35B3.5b},{F35B3.5a} 6210 CB6890_redo X 17047302 1 C T 255 1.00 63 62 0 24 24 @TTTttTtTtTTtTTtTTtTTTtTT point 0 missense GAG->AAG[Glu->Lys] {C30G4.3.1,C30G4.3.2} 6211 CB6890_redo X 17047309 1 T C 255 1.00 63 62 0 16 16 @CCcCCcCCcCCCcCCc point 0 silent GAA->GAG[Glu->Glu] {C30G4.3.1,C30G4.3.2} 6212 CB6890_redo X 17047323 1 G T 211 1.00 63 62 0 8 8 @TTtTtTtT point 0 missense CAG->AAG[Gln->Lys] {C30G4.3.1,C30G4.3.2} 6216 CB6890_redo X 17097607 1 T A 255 1.00 63 62 0 29 29 @aAaaaAAaaaaAAAaaAAaAAAAaAAaaa point 0 SNP none {haw111984,pas37283} 6217 CB6890_redo X 17105478 1 G C 255 1.00 63 62 0 18 18 @CccCCCcCCCcCcCcCcC point 0 nongenic -690 upstream {C08A9.8} 6218 CB6890_redo X 17168879 1 A G 151 1.00 63 62 0 7 7 @GGGGGGG point 0 nongenic -11005 upstream {T23C6.5} 6241 CB6890_redo X 17444362 1 A C 22 3.12 0 22 0 8 8 @cCcCcCCc point 0 nongenic -7944 upstream {C36E6.2} 6242 CB6890_redo X 17444421 1 A C 19 1.88 0 2 0 8 8 @CcCCCCCC point 0 nongenic -7885 upstream {C36E6.2} 6244 CB6890_redo X 17444481 1 G C 19 1.56 0 16 0 9 9 @cCCCCCCCC point 0 nongenic -7825 upstream {C36E6.2} 6252 CB6890_redo X 17621416 1 A T 255 1.00 63 62 0 29 29 @tTtTTTttTtTTTTtttTTTTttttTtTT point 0 SNP none {haw112084} 6253 CB6890_redo X 17683012 1 G A 255 1.00 63 62 0 42 42 @aAaAAAAaaaaAAAaAAaaaaaAaaaaaaaaaaaAaaaaAaa point 0 nongenic,nongenic -12132 upstream,-804 upstream {F20B4.6},{T23E7.6} 6254 CB6890_redo X 17715334 1 G A 255 1.00 63 62 0 39 39 @AAAAaaaAaaAAaAAaAaaaaAaaaaAAaAAaaAAaAaa point 0 nongenic,nongenic,nongenic 455 into,457 into,589 downstream {cTel55X.1a.2,cTel55X.1b},{cTel55X.1a.1},{6R55.2}