Timestamp	Total RAM	Free RAM	Swap Available	Memory Available	Memory Available at Start	Memory Available at Block Start	Memory Used Since Start	Memory Used Since Block Start	Memory Resident Size	Memory Virtual Size	Message
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	Running ProbesetGenotypeEngine...
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'help' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'verbose' = '1'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'console-off' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'use-socket' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'version' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'force' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'throw-exception' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'analysis-files-path' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'xml-file' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'temp-dir' = '/data/outbred_jerome/ANALYSIS/all_F1_MvA_005/temp'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'out-dir' = '/data/outbred_jerome/ANALYSIS/all_F1_MvA_005'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'log-file' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'command-line' = 'apt-probeset-genotype -o /data/outbred_jerome/ANALYSIS/all_F1_MvA_005 -c /data/outbred_jerome/ANALYSIS/MOUSEDIVm520650.CDF --cel-files /data/outbred_jerome/ANALYSIS/all_f1s_cels_liste.txt -s /data/outbred_jerome/ANALYSIS/SNPsubset.txt --a quant-norm.sketch=50000,pm-only,brlmm-p.CM=1.bins=100.mix=1.bic=2.HARD=3.SB=0.75.KX=0.2.KH=0.3.KXX=-0.1.KAH=-0.1.KHB=-0.1.transform=MVA.AAM=2.0.BBM=-2.0.AAV=0.06.BBV=0.06.ABV=0.06.copyqc=0.00000.wobble=0.05.CSepThr=4.CSepPen=0.1.KYAH=-0.05.KYHB=-0.05.KYAB=-0.1.AAY=9.ABY=9.5.BBY=9.copytype=-1.clustertype=2.ocean=0.00001.MS=0.05 --read-models-brlmmp /data/outbred_jerome/ANALYSIS/Mouse.models --summaries --write-models --chrX-probes /data/outbred_jerome/ANALYSIS/Mouse.chrXprobes --chrY-probes /data/outbred_jerome/ANALYSIS/Mouse.chrYprobes --special-snps /data/outbred_jerome/ANALYSIS/Mouse.specialSNPs'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'exec-guid' = '30563b35-b30a-445b-9666-236b190296a8'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'program-name' = 'apt-probeset-genotype'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'program-company' = 'Affymetrix'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'program-version' = '1.14.2'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'program-cvs-id' = 'svn://svn.ev.affymetrix.com/apt/projects/apt/branches/APT_1_14_2_BRANCH/affy/sdk/release 16360:16361'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'version-to-report' = '1.14.2 svn://svn.ev.affymetrix.com/apt/projects/apt/branches/APT_1_14_2_BRANCH/affy/sdk/release 16360:16361 na'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'free-mem-at-start' = '24541534617'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'meta-data-info' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'cel-files' = '/data/outbred_jerome/ANALYSIS/all_f1s_cels_liste.txt'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'cdf-file' = '/data/outbred_jerome/ANALYSIS/MOUSEDIVm520650.CDF'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'spf-file' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'chrX-snps' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'special-snps' = '/data/outbred_jerome/ANALYSIS/Mouse.specialSNPs'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'chrX-probes' = '/data/outbred_jerome/ANALYSIS/Mouse.chrXprobes'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'chrY-probes' = '/data/outbred_jerome/ANALYSIS/Mouse.chrYprobes'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'chrZ-probes' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'chrW-probes' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'probeset-ids' = '/data/outbred_jerome/ANALYSIS/SNPsubset.txt'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'probeset-ids-reported' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'probe-class-file' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'chip-type' = 'MOUSEDIVm520650'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'annotation-file' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'genotype-markers-cn-file' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'file5-compact' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'sqlite-output' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'table-output' = 'true'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'output-forced-calls' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'output-context' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'cc-chp-output' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'xda-chp-output' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'cc-chp-out-dir' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'xda-chp-out-dir' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'summaries' = 'true'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'report-file' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'analysis' = 'quant-norm.sketch=50000,pm-only,brlmm-p.CM=1.bins=100.mix=1.bic=2.HARD=3.SB=0.75.KX=0.2.KH=0.3.KXX=-0.1.KAH=-0.1.KHB=-0.1.transform=MVA.AAM=2.0.BBM=-2.0.AAV=0.06.BBV=0.06.ABV=0.06.copyqc=0.00000.wobble=0.05.CSepThr=4.CSepPen=0.1.KYAH=-0.05.KYHB=-0.05.KYAB=-0.1.AAY=9.ABY=9.5.BBY=9.copytype=-1.clustertype=2.ocean=0.00001.MS=0.05'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'qmethod-spec' = 'plier.optmethod=1'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'read-models-brlmm' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'read-models-brlmmp' = '/data/outbred_jerome/ANALYSIS/Mouse.models'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'read-models-birdseed' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'write-models' = 'true'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'db-from-prior-models' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'db-from-posterior-models' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'feat-effects' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'writeOldStyleFeatureEffectsFile' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'feat-eff-remove-allele-suffix' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'use-feat-eff' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'feat-details' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'target-sketch' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'write-sketch' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'dm-thresh' = '.17'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'reference-profile' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'write-profile' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'dm-hetmult' = '0'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'prior-size' = '10000'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'list-sample' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'read-priors-brlmm' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'write-prior' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'norm-size' = '0'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'write-norm' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'set-analysis-name' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'include-quant-in-report-file-name' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'set-gender-method' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'read-genders' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'read-inbred' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'no-gender-force' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'em-gender' = 'true'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'female-thresh' = '0.48'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'male-thresh' = '0.71'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'zw-gender-calling' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'explain' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'kill-list' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'dm-out' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'all-types' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'genotypes' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'select-probes' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'call-coder-max-alleles' = '6'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'call-coder-type' = 'UCHAR'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'call-coder-version' = '1.0'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'use-disk' = 'true'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'disk-cache' = '50'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-global-file' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-global-file-no-replace' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-group' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-calls' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-calls-use-global' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-summaries' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-summaries-use-global' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-feature-effects' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-feature-effects-use-global' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-feature-details' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-feature-details-use-global' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-sketch' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-sketch-use-global' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-write-models' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-write-models-use-global' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-global-input-file' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-input-group' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-sketch-input-global' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-sketch-input-file' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-sketch-input-group' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-sketch-input-name' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-feature-effects-input-global' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-feature-effects-input-file' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-feature-effects-input-group' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-feature-effects-input-name' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-models-input-global' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-models-input-file' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-models-input-group' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'a5-models-input-name' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'snpqc-probesets' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'cels' = '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross01.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross02.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross03.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross04.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross05.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross06.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross07.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross08.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross09.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross10.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross11.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross12.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross13.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross14.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross15.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross16.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross17.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross18.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross19.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross20.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross21.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross22.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross23.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross24.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross25.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross26.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross27.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross28.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross29.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross30.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross31.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross32.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross33.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross34.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross35.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross36.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross37.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross38.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross39.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross40.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross41.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross42.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross43.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross44.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross45.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross46.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross47.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross48.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross49.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross50.CEL', '/data/outbred_jerome/CEL_files/1046044167.CEL', '/data/outbred_jerome/CEL_files/1046044318.CEL', '/data/outbred_jerome/CEL_files/1046044367.CEL', '/data/outbred_jerome/CEL_files/1046044399.CEL', '/data/outbred_jerome/CEL_files/1046044415.CEL', '/data/outbred_jerome/CEL_files/1046044434.CEL', '/data/outbred_jerome/CEL_files/1046044456.CEL', '/data/outbred_jerome/CEL_files/1046044463.CEL', '/data/outbred_jerome/CEL_files/1046044465.CEL', '/data/outbred_jerome/CEL_files/1046044467.CEL', '/data/outbred_jerome/CEL_files/1046044473.CEL', '/data/outbred_jerome/CEL_files/1046044485.CEL', '/data/outbred_jerome/CEL_files/1046044489.CEL', '/data/outbred_jerome/CEL_files/1046044491.CEL', '/data/outbred_jerome/CEL_files/1046044654.CEL', '/data/outbred_jerome/CEL_files/1046045336.CEL', '/data/outbred_jerome/CEL_files/1046045337.CEL', '/data/outbred_jerome/CEL_files/1046045361_2.CEL', '/data/outbred_jerome/CEL_files/1046045368.CEL', '/data/outbred_jerome/CEL_files/1046045416.CEL', '/data/outbred_jerome/CEL_files/1046045447.CEL', '/data/outbred_jerome/CEL_files/1046045465.CEL', '/data/outbred_jerome/CEL_files/1046045471.CEL', '/data/outbred_jerome/CEL_files/1046045479.CEL', '/data/outbred_jerome/CEL_files/1046045484.CEL', '/data/outbred_jerome/CEL_files/1046045487.CEL', '/data/outbred_jerome/CEL_files/1046045556.CEL', '/data/outbred_jerome/CEL_files/1046045564.CEL', '/data/outbred_jerome/CEL_files/1046045568.CEL', '/data/outbred_jerome/CEL_files/1046045571.CEL', '/data/outbred_jerome/CEL_files/1046045581.CEL', '/data/outbred_jerome/CEL_files/1046045627.CEL', '/data/outbred_jerome/CEL_files/1046045633.CEL', '/data/outbred_jerome/CEL_files/1046045664.CEL', '/data/outbred_jerome/CEL_files/1046045677.CEL', '/data/outbred_jerome/CEL_files/1046045678.CEL', '/data/outbred_jerome/CEL_files/1046046639.CEL', '/data/outbred_jerome/CEL_files/1046046641.CEL', '/data/outbred_jerome/CEL_files/1046046647.CEL', '/data/outbred_jerome/CEL_files/1046046662.CEL', '/data/outbred_jerome/CEL_files/1046046664.CEL', '/data/outbred_jerome/CEL_files/1046046666.CEL', '/data/outbred_jerome/CEL_files/1046046689.CEL', '/data/outbred_jerome/CEL_files/1046046692.CEL', '/data/outbred_jerome/CEL_files/1046046764.CEL', '/data/outbred_jerome/CEL_files/1046046774.CEL', '/data/outbred_jerome/CEL_files/1046046780.CEL', '/data/outbred_jerome/CEL_files/1046046797.CEL', '/data/outbred_jerome/CEL_files/1046046798.CEL', '/data/outbred_jerome/CEL_files/1046046811.CEL', '/data/outbred_jerome/CEL_files/1046046812.CEL', '/data/outbred_jerome/CEL_files/1046046813.CEL', '/data/outbred_jerome/CEL_files/1046046815.CEL', '/data/outbred_jerome/CEL_files/1046046816.CEL', '/data/outbred_jerome/CEL_files/1046046818.CEL', '/data/outbred_jerome/CEL_files/1046046822.CEL', '/data/outbred_jerome/CEL_files/1046046824.CEL', '/data/outbred_jerome/CEL_files/1046046826.CEL', '/data/outbred_jerome/CEL_files/1046047072.CEL', '/data/outbred_jerome/CEL_files/1046047119.CEL', '/data/outbred_jerome/CEL_files/1046047340.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_36.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_37.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_38.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_39.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_40.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_42.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_43.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_44.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_45.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_46.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_47.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_48.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_49.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_51.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_52.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_53.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_54.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_55.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_56.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_57.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_58.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_59.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_60.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_61.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_62.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_63.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_64.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_65.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_66.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_67.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_68.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_69.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_70.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_71.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_72.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_73.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_74.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_75.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_76.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_77.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_78.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_80.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_81.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_82.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_83.CEL'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'result-files' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'time-start' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'time-end' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'time-run-minutes' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'analysis-guid' = ''
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'analysis-count' = '1'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'num-rows' = '2572'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'num-cols' = '2680'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'probe-count' = '6892960'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'probeset-count' = '2458697'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'channel-count' = '1'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'need-gc' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'need-mismatch' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	ProbesetGenotypeEngine: Initial Option 'need-allelematch' = 'false'
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	Base Engine Before runImp()
04/18/2011 15:01:55	32227	6147	17410	23404	23404	23404	0	0	3	22	Beginning analysis of 156 cel files.
04/18/2011 15:01:56	32227	6147	17410	23404	23404	23404	0	0	3	22	Opening layout file: /data/outbred_jerome/ANALYSIS/MOUSEDIVm520650.CDF
04/18/2011 15:01:56	32227	6147	17410	23404	23404	23404	0	0	3	22	There are: 2458697 probesets.
04/18/2011 15:01:56	32227	6141	17410	23398	23404	23404	6	6	9	28	Reading 2458697 probesets
04/18/2011 15:01:56	32227	6141	17410	23398	23404	23404	6	6	9	28	Progress Step
04/18/2011 15:01:56	32227	6141	17410	23398	23404	23404	6	6	9	28	Progress Step
04/18/2011 15:01:56	32227	6141	17410	23398	23404	23404	6	6	9	28	Progress Step
04/18/2011 15:01:56	32227	6141	17410	23398	23404	23404	6	6	9	28	Progress Step
04/18/2011 15:01:56	32227	6141	17410	23398	23404	23404	6	6	9	28	Progress Step
04/18/2011 15:01:56	32227	6141	17410	23398	23404	23404	6	6	9	28	Progress Step
04/18/2011 15:01:57	32227	6133	17410	23389	23404	23404	14	14	18	38	Progress Step
04/18/2011 15:01:57	32227	6122	17410	23378	23404	23404	25	25	28	49	Progress Step
04/18/2011 15:01:58	32227	6109	17410	23366	23404	23404	38	38	41	65	Progress Step
04/18/2011 15:01:58	32227	6097	17410	23354	23404	23404	49	49	53	74	Progress Step
04/18/2011 15:01:59	32227	6106	17410	23363	23404	23404	41	41	66	97	Progress Step
04/18/2011 15:02:00	32227	6096	17410	23352	23404	23404	51	51	77	104	Progress Step
04/18/2011 15:02:00	32227	6084	17410	23340	23404	23404	63	63	89	113	Progress Step
04/18/2011 15:02:01	32227	6073	17410	23329	23404	23404	74	74	100	121	Progress Step
04/18/2011 15:02:02	32227	6050	17410	23307	23404	23404	97	97	122	166	Progress Step
04/18/2011 15:02:02	32227	6046	17410	23303	23404	23404	101	101	125	167	Progress Step
04/18/2011 15:02:03	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:03	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:03	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:03	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:03	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:03	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:03	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:03	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:03	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:03	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:03	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:03	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:03	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:03	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:03	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:03	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:03	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:04	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:04	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:04	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:04	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:04	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:04	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:04	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:04	32227	6039	17410	23296	23404	23404	108	108	133	172	Progress Step
04/18/2011 15:02:04	32227	6039	17410	23296	23404	23404	108	108	133	172	Done.	8 second run time
04/18/2011 15:02:04	32227	6039	17410	23296	23404	23404	108	108	133	172	Kept 626135 probesets.
04/18/2011 15:02:04	32227	6042	17410	23299	23404	23404	105	105	129	168	Loaded 626135 probe sets.
04/18/2011 15:02:04	32227	6042	17410	23299	23404	23404	105	105	129	168	Loaded 626135 probesets.
04/18/2011 15:02:04	32227	6043	17410	23300	23404	23404	104	104	128	168	Opening probeset file: SNPsubset.txt
04/18/2011 15:02:05	32227	6019	17410	23276	23404	23404	127	127	152	196	Md5sum of '/data/outbred_jerome/ANALYSIS/SNPsubset.txt' is '06e35184a8b99bf2d42f25ee40f28a56'
04/18/2011 15:02:06	32227	5983	17410	23240	23404	23404	164	164	189	232	Made ChipStream of type: quant-norm
04/18/2011 15:02:15	32227	5807	17410	23063	23404	23404	340	340	365	408	Found 646479 SNP priors in the input file.
04/18/2011 15:02:16	32227	5732	17410	22989	23404	23404	415	415	440	486	Number of pm probes is: 5012844
04/18/2011 15:02:16	32227	5732	17410	22989	23404	23404	415	415	440	486	Building and sorting probeset index.
04/18/2011 15:02:18	32227	5714	17410	22971	23404	23404	432	432	458	518	Read 500 X probes on channel 0,Read 100 Y probes on channel 0,
04/18/2011 15:02:18	32227	5714	17410	22971	23404	23404	432	432	458	518	Reading cel files.
04/18/2011 15:02:18	32227	5714	17410	22971	23404	23404	432	432	458	518	Reading and pre-processing 156 cel files
04/18/2011 15:02:18	32227	5714	17410	22971	23404	23404	432	432	458	518	Progress Step
04/18/2011 15:02:19	32227	5480	17410	22816	23404	23404	587	587	636	695	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross01.CEL: meanY=1021.17; meanX=1220.58; ratio=0.836624
04/18/2011 15:02:19	32227	5480	17410	22816	23404	23404	587	587	610	669	Progress Step
04/18/2011 15:02:20	32227	5400	17410	22815	23404	23404	588	588	636	695	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross02.CEL: meanY=369.96; meanX=2475.22; ratio=0.149466
04/18/2011 15:02:20	32227	5400	17410	22815	23404	23404	588	588	610	669	Progress Step
04/18/2011 15:02:21	32227	5321	17410	22816	23404	23404	588	588	636	695	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross03.CEL: meanY=1370.83; meanX=1684.34; ratio=0.813869
04/18/2011 15:02:22	32227	5321	17410	22816	23404	23404	588	588	610	669	Progress Step
04/18/2011 15:02:22	32227	5241	17410	22815	23404	23404	589	589	636	695	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross04.CEL: meanY=883.34; meanX=1138.98; ratio=0.775552
04/18/2011 15:02:23	32227	5241	17410	22815	23404	23404	589	589	610	669	Progress Step
04/18/2011 15:02:24	32227	5160	17410	22813	23404	23404	590	590	636	695	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross05.CEL: meanY=297.7; meanX=1923.56; ratio=0.154765
04/18/2011 15:02:24	32227	5160	17410	22813	23404	23404	590	590	610	669	Progress Step
04/18/2011 15:02:25	32227	5080	17410	22811	23404	23404	592	592	636	695	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross06.CEL: meanY=1348.82; meanX=1135.75; ratio=1.1876
04/18/2011 15:02:25	32227	5080	17410	22812	23404	23404	592	592	610	669	Progress Step
04/18/2011 15:02:26	32227	4999	17410	22810	23404	23404	593	593	636	695	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross07.CEL: meanY=1376.82; meanX=1788.12; ratio=0.769984
04/18/2011 15:02:27	32227	4999	17410	22810	23404	23404	593	593	610	669	Progress Step
04/18/2011 15:02:27	32227	4919	17410	22809	23404	23404	595	595	636	695	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross08.CEL: meanY=1346.05; meanX=1691.7; ratio=0.795681
04/18/2011 15:02:28	32227	4919	17410	22809	23404	23404	595	595	610	669	Progress Step
04/18/2011 15:02:29	32227	4839	17410	22807	23404	23404	596	596	636	695	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross09.CEL: meanY=395.05; meanX=2723.93; ratio=0.14503
04/18/2011 15:02:29	32227	4839	17410	22807	23404	23404	596	596	610	669	Progress Step
04/18/2011 15:02:30	32227	4758	17410	22806	23404	23404	597	597	636	695	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross10.CEL: meanY=1335.64; meanX=1674.62; ratio=0.79758
04/18/2011 15:02:30	32227	4758	17410	22806	23404	23404	598	598	610	669	Progress Step
04/18/2011 15:02:31	32227	4704	17410	22804	23404	23404	599	599	636	695	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross11.CEL: meanY=1229.47; meanX=1528.92; ratio=0.804141
04/18/2011 15:02:31	32227	4704	17410	22804	23404	23404	599	599	610	669	Progress Step
04/18/2011 15:02:32	32227	4623	17410	22803	23404	23404	601	601	636	695	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross12.CEL: meanY=436.85; meanX=2615.09; ratio=0.16705
04/18/2011 15:02:33	32227	4623	17410	22803	23404	23404	601	601	610	669	Progress Step
04/18/2011 15:02:33	32227	4543	17410	22801	23404	23404	602	602	636	695	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross13.CEL: meanY=1209.76; meanX=1608.46; ratio=0.752125
04/18/2011 15:02:34	32227	4543	17410	22801	23404	23404	602	602	610	669	Progress Step
04/18/2011 15:02:35	32227	4462	17410	22800	23404	23404	604	604	636	695	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross14.CEL: meanY=360.88; meanX=2205.74; ratio=0.163609
04/18/2011 15:02:35	32227	4462	17410	22800	23404	23404	604	604	610	669	Progress Step
04/18/2011 15:02:36	32227	4381	17410	22798	23404	23404	605	605	637	696	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross15.CEL: meanY=1143.67; meanX=1501.19; ratio=0.761843
04/18/2011 15:02:36	32227	4381	17410	22798	23404	23404	605	605	611	670	Progress Step
04/18/2011 15:02:37	32227	4274	17410	22770	23404	23404	634	634	663	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross16.CEL: meanY=1177.45; meanX=1544.56; ratio=0.762323
04/18/2011 15:02:38	32227	4274	17410	22770	23404	23404	634	634	637	696	Progress Step
04/18/2011 15:02:38	32227	4193	17410	22768	23404	23404	635	635	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross17.CEL: meanY=1109.14; meanX=1442.76; ratio=0.768761
04/18/2011 15:02:39	32227	4193	17410	22768	23404	23404	635	635	637	696	Progress Step
04/18/2011 15:02:39	32227	4113	17410	22767	23404	23404	636	636	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross18.CEL: meanY=1066.82; meanX=1223.83; ratio=0.871706
04/18/2011 15:02:40	32227	4113	17410	22767	23404	23404	636	636	637	696	Progress Step
04/18/2011 15:02:41	32227	4032	17410	22765	23404	23404	638	638	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross19.CEL: meanY=455.45; meanX=2593.37; ratio=0.175621
04/18/2011 15:02:41	32227	4032	17410	22765	23404	23404	638	638	637	696	Progress Step
04/18/2011 15:02:42	32227	3952	17410	22764	23404	23404	640	640	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross20.CEL: meanY=1289.91; meanX=1543.5; ratio=0.835704
04/18/2011 15:02:43	32227	3952	17410	22764	23404	23404	640	640	637	696	Progress Step
04/18/2011 15:02:43	32227	3871	17410	22762	23404	23404	641	641	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross21.CEL: meanY=1336.69; meanX=1590.15; ratio=0.840608
04/18/2011 15:02:44	32227	3871	17410	22762	23404	23404	641	641	637	696	Progress Step
04/18/2011 15:02:44	32227	3791	17410	22761	23404	23404	642	642	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross22.CEL: meanY=405.79; meanX=2500.67; ratio=0.162272
04/18/2011 15:02:45	32227	3791	17410	22761	23404	23404	642	642	637	696	Progress Step
04/18/2011 15:02:46	32227	3711	17410	22760	23404	23404	644	644	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross23.CEL: meanY=312.3; meanX=2429.53; ratio=0.128543
04/18/2011 15:02:46	32227	3710	17410	22760	23404	23404	644	644	637	696	Progress Step
04/18/2011 15:02:47	32227	3630	17410	22758	23404	23404	645	645	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross24.CEL: meanY=342.7; meanX=2533.36; ratio=0.135275
04/18/2011 15:02:48	32227	3630	17410	22758	23404	23404	645	645	637	696	Progress Step
04/18/2011 15:02:48	32227	3549	17410	22756	23404	23404	647	647	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross25.CEL: meanY=1292.12; meanX=1683.49; ratio=0.767525
04/18/2011 15:02:49	32227	3549	17410	22757	23404	23404	647	647	637	696	Progress Step
04/18/2011 15:02:49	32227	3469	17410	22755	23404	23404	649	649	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross26.CEL: meanY=1195.29; meanX=1527.61; ratio=0.782456
04/18/2011 15:02:50	32227	3469	17410	22755	23404	23404	649	649	637	696	Progress Step
04/18/2011 15:02:51	32227	3388	17410	22754	23404	23404	650	650	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross27.CEL: meanY=279.93; meanX=2212.5; ratio=0.126522
04/18/2011 15:02:51	32227	3388	17410	22754	23404	23404	650	650	637	696	Progress Step
04/18/2011 15:02:52	32227	3308	17410	22752	23404	23404	651	651	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross28.CEL: meanY=744.6; meanX=925.284; ratio=0.804726
04/18/2011 15:02:52	32227	3291	17410	22735	23404	23404	668	668	637	696	Progress Step
04/18/2011 15:02:55	32227	3210	17410	22734	23404	23404	670	670	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross29.CEL: meanY=851.49; meanX=1148.89; ratio=0.74114
04/18/2011 15:02:56	32227	3210	17410	22734	23404	23404	670	670	637	696	Progress Step
04/18/2011 15:02:57	32227	3146	17410	22748	23404	23404	655	655	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross30.CEL: meanY=1025.76; meanX=1420.17; ratio=0.722281
04/18/2011 15:02:58	32227	3146	17410	22749	23404	23404	655	655	637	696	Progress Step
04/18/2011 15:02:58	32227	3065	17410	22747	23404	23404	657	657	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross31.CEL: meanY=405.02; meanX=504.142; ratio=0.803385
04/18/2011 15:02:59	32227	3065	17410	22747	23404	23404	657	657	637	696	Progress Step
04/18/2011 15:02:59	32227	2985	17410	22746	23404	23404	658	658	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross32.CEL: meanY=312.04; meanX=2113.21; ratio=0.147662
04/18/2011 15:03:00	32227	2985	17410	22746	23404	23404	658	658	637	696	Progress Step
04/18/2011 15:03:01	32227	2904	17410	22744	23404	23404	660	660	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross33.CEL: meanY=1132.47; meanX=1323.05; ratio=0.855957
04/18/2011 15:03:01	32227	2904	17410	22744	23404	23404	660	660	637	696	Progress Step
04/18/2011 15:03:02	32227	2824	17410	22742	23404	23404	661	661	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross34.CEL: meanY=358.78; meanX=2432.73; ratio=0.14748
04/18/2011 15:03:03	32227	2824	17410	22742	23404	23404	661	661	637	696	Progress Step
04/18/2011 15:03:04	32227	2743	17410	22741	23404	23404	663	663	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross35.CEL: meanY=638.81; meanX=824.254; ratio=0.775016
04/18/2011 15:03:04	32227	2743	17410	22741	23404	23404	662	662	637	696	Progress Step
04/18/2011 15:03:05	32227	2663	17410	22740	23404	23404	664	664	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross36.CEL: meanY=1293.73; meanX=1686.59; ratio=0.767069
04/18/2011 15:03:05	32227	2663	17410	22740	23404	23404	664	664	637	696	Progress Step
04/18/2011 15:03:06	32227	2582	17410	22738	23404	23404	665	665	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross37.CEL: meanY=420.97; meanX=3056.36; ratio=0.137736
04/18/2011 15:03:07	32227	2582	17410	22738	23404	23404	665	665	637	696	Progress Step
04/18/2011 15:03:07	32227	2502	17410	22737	23404	23404	667	667	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross38.CEL: meanY=858.8; meanX=1049.37; ratio=0.818399
04/18/2011 15:03:08	32227	2502	17410	22737	23404	23404	667	667	637	696	Progress Step
04/18/2011 15:03:09	32227	2420	17410	22734	23404	23404	670	670	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross39.CEL: meanY=318.49; meanX=1941.09; ratio=0.164078
04/18/2011 15:03:09	32227	2420	17410	22734	23404	23404	670	670	637	696	Progress Step
04/18/2011 15:03:10	32227	2340	17410	22732	23404	23404	671	671	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross40.CEL: meanY=779.45; meanX=936.006; ratio=0.83274
04/18/2011 15:03:10	32227	2340	17410	22732	23404	23404	671	671	637	696	Progress Step
04/18/2011 15:03:11	32227	2259	17410	22731	23404	23404	673	673	664	723	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross41.CEL: meanY=1144; meanX=1470.54; ratio=0.777947
04/18/2011 15:03:12	32227	2258	17410	22730	23404	23404	673	673	638	697	Progress Step
04/18/2011 15:03:12	32227	2152	17410	22702	23404	23404	701	701	690	749	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross42.CEL: meanY=1040.11; meanX=1203.46; ratio=0.864265
04/18/2011 15:03:13	32227	2152	17410	22703	23404	23404	701	701	664	723	Progress Step
04/18/2011 15:03:13	32227	2071	17410	22701	23404	23404	702	702	690	749	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross43.CEL: meanY=994.4; meanX=1170.99; ratio=0.849196
04/18/2011 15:03:14	32227	2071	17410	22701	23404	23404	702	702	664	723	Progress Step
04/18/2011 15:03:15	32227	1991	17410	22700	23404	23404	703	703	690	749	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross44.CEL: meanY=1376.18; meanX=1502.88; ratio=0.915693
04/18/2011 15:03:15	32227	1991	17410	22700	23404	23404	704	704	664	723	Progress Step
04/18/2011 15:03:16	32227	1910	17410	22698	23404	23404	705	705	690	749	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross45.CEL: meanY=496.29; meanX=643.278; ratio=0.771502
04/18/2011 15:03:16	32227	1910	17410	22698	23404	23404	705	705	664	723	Progress Step
04/18/2011 15:03:17	32227	1830	17410	22697	23404	23404	707	707	690	749	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross46.CEL: meanY=1506.28; meanX=1278.26; ratio=1.17839
04/18/2011 15:03:18	32227	1830	17410	22697	23404	23404	707	707	664	723	Progress Step
04/18/2011 15:03:18	32227	1749	17410	22695	23404	23404	708	708	690	749	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross47.CEL: meanY=1414; meanX=1715.45; ratio=0.824274
04/18/2011 15:03:19	32227	1749	17410	22695	23404	23404	708	708	664	723	Progress Step
04/18/2011 15:03:19	32227	1668	17410	22694	23404	23404	710	710	690	749	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross48.CEL: meanY=1295.59; meanX=1557.44; ratio=0.831874
04/18/2011 15:03:20	32227	1668	17410	22694	23404	23404	710	710	664	723	Progress Step
04/18/2011 15:03:21	32227	1588	17410	22692	23404	23404	711	711	690	749	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross49.CEL: meanY=882.3; meanX=1076.14; ratio=0.819876
04/18/2011 15:03:21	32227	1588	17410	22693	23404	23404	711	711	664	723	Progress Step
04/18/2011 15:03:22	32227	1508	17410	22691	23404	23404	712	712	690	749	Gender call for sample /data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross50.CEL: meanY=1760.27; meanX=1430.55; ratio=1.23049
04/18/2011 15:03:23	32227	1508	17410	22691	23404	23404	712	712	664	723	Progress Step
04/18/2011 15:03:23	32227	1454	17410	22690	23404	23404	714	714	690	749	Gender call for sample /data/outbred_jerome/CEL_files/1046044167.CEL: meanY=278.3; meanX=1198.52; ratio=0.232203
04/18/2011 15:03:24	32227	1454	17410	22690	23404	23404	713	713	664	723	Progress Step
04/18/2011 15:03:24	32227	1400	17410	22689	23404	23404	715	715	690	749	Gender call for sample /data/outbred_jerome/CEL_files/1046044318.CEL: meanY=330.75; meanX=388.312; ratio=0.851763
04/18/2011 15:03:25	32227	1400	17410	22689	23404	23404	715	715	664	723	Progress Step
04/18/2011 15:03:25	32227	1346	17410	22687	23404	23404	716	716	690	749	Gender call for sample /data/outbred_jerome/CEL_files/1046044367.CEL: meanY=423.21; meanX=505.488; ratio=0.837231
04/18/2011 15:03:26	32227	1346	17410	22687	23404	23404	716	716	664	723	Progress Step
04/18/2011 15:03:26	32227	1292	17410	22686	23404	23404	718	718	690	749	Gender call for sample /data/outbred_jerome/CEL_files/1046044399.CEL: meanY=197.33; meanX=674.806; ratio=0.292425
04/18/2011 15:03:27	32227	1275	17410	22669	23404	23404	735	735	664	723	Progress Step
04/18/2011 15:03:27	32227	1221	17410	22668	23404	23404	736	736	690	749	Gender call for sample /data/outbred_jerome/CEL_files/1046044415.CEL: meanY=293.39; meanX=1044.57; ratio=0.28087
04/18/2011 15:03:28	32227	1219	17410	22666	23404	23404	737	737	664	723	Progress Step
04/18/2011 15:03:28	32227	1167	17410	22666	23404	23404	737	737	690	749	Gender call for sample /data/outbred_jerome/CEL_files/1046044434.CEL: meanY=234.77; meanX=1040.26; ratio=0.225685
04/18/2011 15:03:29	32227	1167	17410	22667	23404	23404	737	737	664	723	Progress Step
04/18/2011 15:03:29	32227	1113	17410	22665	23404	23404	738	738	690	749	Gender call for sample /data/outbred_jerome/CEL_files/1046044456.CEL: meanY=324.35; meanX=1241.03; ratio=0.261355
04/18/2011 15:03:30	32227	1114	17410	22666	23404	23404	738	738	664	723	Progress Step
04/18/2011 15:03:30	32227	1060	17410	22665	23404	23404	738	738	690	749	Gender call for sample /data/outbred_jerome/CEL_files/1046044463.CEL: meanY=387.77; meanX=434.03; ratio=0.893417
04/18/2011 15:03:31	32227	1074	17410	22679	23404	23404	724	724	664	723	Progress Step
04/18/2011 15:03:31	32227	1020	17410	22678	23404	23404	726	726	690	749	Gender call for sample /data/outbred_jerome/CEL_files/1046044465.CEL: meanY=232.49; meanX=960.956; ratio=0.241936
04/18/2011 15:03:32	32227	1020	17410	22678	23404	23404	726	726	664	723	Progress Step
04/18/2011 15:03:32	32227	966	17410	22676	23404	23404	727	727	690	749	Gender call for sample /data/outbred_jerome/CEL_files/1046044467.CEL: meanY=217.76; meanX=1029.56; ratio=0.211509
04/18/2011 15:03:33	32227	966	17410	22676	23404	23404	727	727	664	723	Progress Step
04/18/2011 15:03:33	32227	912	17410	22675	23404	23404	729	729	690	749	Gender call for sample /data/outbred_jerome/CEL_files/1046044473.CEL: meanY=380.09; meanX=480.154; ratio=0.7916
04/18/2011 15:03:34	32227	912	17410	22675	23404	23404	729	729	664	723	Progress Step
04/18/2011 15:03:35	32227	858	17410	22673	23404	23404	730	730	690	749	Gender call for sample /data/outbred_jerome/CEL_files/1046044485.CEL: meanY=778.76; meanX=888.2; ratio=0.876785
04/18/2011 15:03:35	32227	858	17410	22673	23404	23404	730	730	664	723	Progress Step
04/18/2011 15:03:36	32227	804	17410	22672	23404	23404	731	731	690	749	Gender call for sample /data/outbred_jerome/CEL_files/1046044489.CEL: meanY=285.13; meanX=1381.67; ratio=0.206367
04/18/2011 15:03:36	32227	804	17410	22672	23404	23404	731	731	664	723	Progress Step
04/18/2011 15:03:37	32227	750	17410	22671	23404	23404	733	733	690	749	Gender call for sample /data/outbred_jerome/CEL_files/1046044491.CEL: meanY=707.77; meanX=765.736; ratio=0.9243
04/18/2011 15:03:37	32227	750	17410	22671	23404	23404	733	733	664	723	Progress Step
04/18/2011 15:03:38	32227	696	17410	22669	23404	23404	734	734	690	749	Gender call for sample /data/outbred_jerome/CEL_files/1046044654.CEL: meanY=175.42; meanX=903.156; ratio=0.19423
04/18/2011 15:03:38	32227	696	17410	22669	23404	23404	734	734	664	723	Progress Step
04/18/2011 15:03:39	32227	642	17410	22668	23404	23404	736	736	690	749	Gender call for sample /data/outbred_jerome/CEL_files/1046045336.CEL: meanY=582.63; meanX=701.612; ratio=0.830416
04/18/2011 15:03:39	32227	642	17410	22668	23404	23404	735	735	664	723	Progress Step
04/18/2011 15:03:40	32227	561	17410	22640	23404	23404	764	764	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046045337.CEL: meanY=934.29; meanX=1022.23; ratio=0.913974
04/18/2011 15:03:40	32227	561	17410	22640	23404	23404	764	764	691	750	Progress Step
04/18/2011 15:03:41	32227	507	17410	22638	23404	23404	765	765	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046045361_2.CEL: meanY=271.47; meanX=1103.55; ratio=0.245998
04/18/2011 15:03:41	32227	507	17410	22638	23404	23404	765	765	691	750	Progress Step
04/18/2011 15:03:42	32227	452	17410	22637	23404	23404	767	767	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046045368.CEL: meanY=370.08; meanX=1489.53; ratio=0.248455
04/18/2011 15:03:43	32227	452	17410	22637	23404	23404	767	767	691	750	Progress Step
04/18/2011 15:03:43	32227	398	17410	22635	23404	23404	768	768	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046045416.CEL: meanY=286.95; meanX=1280.35; ratio=0.224119
04/18/2011 15:03:44	32227	398	17410	22635	23404	23404	768	768	691	750	Progress Step
04/18/2011 15:03:44	32227	344	17410	22634	23404	23404	770	770	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046045447.CEL: meanY=950.95; meanX=1045.92; ratio=0.909203
04/18/2011 15:03:45	32227	344	17410	22634	23404	23404	770	770	691	750	Progress Step
04/18/2011 15:03:45	32227	290	17410	22633	23404	23404	771	771	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046045465.CEL: meanY=163.11; meanX=764.542; ratio=0.213343
04/18/2011 15:03:46	32227	290	17410	22633	23404	23404	771	771	691	750	Progress Step
04/18/2011 15:03:46	32227	236	17410	22631	23404	23404	773	773	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046045471.CEL: meanY=886.1; meanX=911.47; ratio=0.972166
04/18/2011 15:03:47	32227	236	17410	22631	23404	23404	772	772	691	750	Progress Step
04/18/2011 15:03:47	32227	182	17410	22629	23404	23404	774	774	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046045479.CEL: meanY=277.02; meanX=323.22; ratio=0.857063
04/18/2011 15:03:48	32227	181	17410	22629	23404	23404	774	774	691	750	Progress Step
04/18/2011 15:03:48	32227	127	17410	22628	23404	23404	776	776	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046045484.CEL: meanY=515.53; meanX=582.108; ratio=0.885626
04/18/2011 15:03:49	32227	127	17410	22627	23404	23404	776	776	691	750	Progress Step
04/18/2011 15:03:49	32227	98	17410	22625	23404	23404	778	778	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046045487.CEL: meanY=732.13; meanX=836.26; ratio=0.875481
04/18/2011 15:03:50	32227	105	17410	22626	23404	23404	778	778	691	750	Progress Step
04/18/2011 15:03:50	32227	97	17410	22624	23404	23404	779	779	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046045556.CEL: meanY=517.99; meanX=629.172; ratio=0.823288
04/18/2011 15:03:51	32227	105	17410	22625	23404	23404	778	778	691	750	Progress Step
04/18/2011 15:03:51	32227	99	17410	22624	23404	23404	779	779	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046045564.CEL: meanY=507.94; meanX=605.022; ratio=0.83954
04/18/2011 15:03:52	32227	102	17410	22624	23404	23404	779	779	691	750	Progress Step
04/18/2011 15:03:52	32227	96	17410	22624	23404	23404	780	780	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046045568.CEL: meanY=183.44; meanX=842.274; ratio=0.217791
04/18/2011 15:03:53	32227	104	17410	22624	23404	23404	780	780	691	750	Progress Step
04/18/2011 15:03:54	32227	103	17410	22624	23404	23404	780	780	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046045571.CEL: meanY=154; meanX=789.362; ratio=0.195094
04/18/2011 15:03:54	32227	103	17410	22624	23404	23404	780	780	691	750	Progress Step
04/18/2011 15:03:55	32227	104	17410	22623	23404	23404	781	781	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046045581.CEL: meanY=185.42; meanX=938.032; ratio=0.197669
04/18/2011 15:03:55	32227	104	17410	22623	23404	23404	780	780	691	750	Progress Step
04/18/2011 15:03:56	32227	98	17410	22622	23404	23404	782	782	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046045627.CEL: meanY=732.54; meanX=856.418; ratio=0.855353
04/18/2011 15:03:56	32227	104	17410	22622	23404	23404	781	781	691	750	Progress Step
04/18/2011 15:03:57	32227	99	17410	22621	23404	23404	782	782	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046045633.CEL: meanY=698.87; meanX=819.734; ratio=0.852557
04/18/2011 15:03:57	32227	104	17410	22621	23404	23404	782	782	691	750	Progress Step
04/18/2011 15:03:58	32227	96	17410	22622	23404	23404	782	782	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046045664.CEL: meanY=273.31; meanX=1155.91; ratio=0.236446
04/18/2011 15:03:58	32227	100	17410	22617	23404	23404	786	786	691	750	Progress Step
04/18/2011 15:03:59	32227	100	17410	22621	23404	23404	783	783	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046045677.CEL: meanY=336.15; meanX=1560.05; ratio=0.215474
04/18/2011 15:03:59	32227	103	17410	22622	23404	23404	782	782	691	750	Progress Step
04/18/2011 15:04:00	32227	95	17410	22621	23404	23404	783	783	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046045678.CEL: meanY=178.23; meanX=1042.98; ratio=0.170886
04/18/2011 15:04:01	32227	332	17410	22608	23404	23404	796	796	691	750	Progress Step
04/18/2011 15:04:01	32227	280	17410	22609	23404	23404	795	795	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046046639.CEL: meanY=265.61; meanX=1235.71; ratio=0.214945
04/18/2011 15:04:02	32227	280	17410	22608	23404	23404	795	795	691	750	Progress Step
04/18/2011 15:04:02	32227	228	17410	22609	23404	23404	795	795	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046046641.CEL: meanY=643.01; meanX=735.76; ratio=0.87394
04/18/2011 15:04:03	32227	226	17410	22607	23404	23404	797	797	691	750	Progress Step
04/18/2011 15:04:03	32227	170	17410	22604	23404	23404	800	800	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046046647.CEL: meanY=299.26; meanX=1272.27; ratio=0.235218
04/18/2011 15:04:04	32227	171	17410	22605	23404	23404	798	798	691	750	Progress Step
04/18/2011 15:04:04	32227	119	17410	22605	23404	23404	798	798	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046046662.CEL: meanY=885.1; meanX=1042.65; ratio=0.848898
04/18/2011 15:04:05	32227	119	17410	22606	23404	23404	798	798	691	750	Progress Step
04/18/2011 15:04:05	32227	521	17406	22614	23404	23404	790	790	717	776	Gender call for sample /data/outbred_jerome/CEL_files/1046046664.CEL: meanY=195.69; meanX=883.992; ratio=0.221371
04/18/2011 15:04:06	32227	535	17406	22627	23404	23404	776	776	691	750	Progress Step
04/18/2011 15:04:06	32227	481	17406	22627	23404	23404	777	777	718	777	Gender call for sample /data/outbred_jerome/CEL_files/1046046666.CEL: meanY=376.97; meanX=447.512; ratio=0.842368
04/18/2011 15:04:07	32227	482	17406	22627	23404	23404	776	776	691	750	Progress Step
04/18/2011 15:04:07	32227	402	17406	22600	23404	23404	804	804	744	803	Gender call for sample /data/outbred_jerome/CEL_files/1046046689.CEL: meanY=447.8; meanX=1585.07; ratio=0.282511
04/18/2011 15:04:08	32227	402	17406	22600	23404	23404	804	804	718	777	Progress Step
04/18/2011 15:04:08	32227	348	17406	22599	23404	23404	805	805	744	803	Gender call for sample /data/outbred_jerome/CEL_files/1046046692.CEL: meanY=139.58; meanX=511.442; ratio=0.272915
04/18/2011 15:04:09	32227	348	17406	22599	23404	23404	805	805	718	777	Progress Step
04/18/2011 15:04:09	32227	294	17406	22597	23404	23404	806	806	744	803	Gender call for sample /data/outbred_jerome/CEL_files/1046046764.CEL: meanY=624.96; meanX=701.068; ratio=0.89144
04/18/2011 15:04:10	32227	294	17406	22597	23404	23404	806	806	718	777	Progress Step
04/18/2011 15:04:11	32227	241	17406	22597	23404	23404	807	807	744	803	Gender call for sample /data/outbred_jerome/CEL_files/1046046774.CEL: meanY=612.68; meanX=701.376; ratio=0.87354
04/18/2011 15:04:11	32227	241	17406	22597	23404	23404	807	807	718	777	Progress Step
04/18/2011 15:04:12	32227	187	17406	22595	23404	23404	808	808	744	803	Gender call for sample /data/outbred_jerome/CEL_files/1046046780.CEL: meanY=721.19; meanX=838.042; ratio=0.860565
04/18/2011 15:04:12	32227	187	17406	22595	23404	23404	808	808	718	777	Progress Step
04/18/2011 15:04:13	32227	133	17406	22594	23404	23404	810	810	744	803	Gender call for sample /data/outbred_jerome/CEL_files/1046046797.CEL: meanY=743.43; meanX=807.352; ratio=0.920825
04/18/2011 15:04:13	32227	133	17406	22594	23404	23404	810	810	718	777	Progress Step
04/18/2011 15:04:14	32227	97	17406	22592	23404	23404	811	811	744	803	Gender call for sample /data/outbred_jerome/CEL_files/1046046798.CEL: meanY=298.71; meanX=1256.47; ratio=0.237737
04/18/2011 15:04:14	32227	102	17406	22593	23404	23404	810	810	718	777	Progress Step
04/18/2011 15:04:15	32227	99	17406	22593	23404	23404	810	810	744	803	Gender call for sample /data/outbred_jerome/CEL_files/1046046811.CEL: meanY=591.27; meanX=668.064; ratio=0.88505
04/18/2011 15:04:15	32227	102	17406	22594	23404	23404	810	810	718	777	Progress Step
04/18/2011 15:04:16	32227	102	17406	22594	23404	23404	810	810	744	803	Gender call for sample /data/outbred_jerome/CEL_files/1046046812.CEL: meanY=560.51; meanX=658.412; ratio=0.851306
04/18/2011 15:04:16	32227	102	17406	22594	23404	23404	810	810	718	777	Progress Step
04/18/2011 15:04:17	32227	97	17406	22594	23404	23404	809	809	744	803	Gender call for sample /data/outbred_jerome/CEL_files/1046046813.CEL: meanY=279.74; meanX=1209.08; ratio=0.231367
04/18/2011 15:04:17	32227	103	17406	22595	23404	23404	809	809	718	777	Progress Step
04/18/2011 15:04:18	32227	97	17406	22595	23404	23404	809	809	744	803	Gender call for sample /data/outbred_jerome/CEL_files/1046046815.CEL: meanY=196.52; meanX=1120.76; ratio=0.175345
04/18/2011 15:04:19	32227	105	17406	22595	23404	23404	809	809	718	777	Progress Step
04/18/2011 15:04:19	32227	98	17406	22594	23404	23404	809	809	744	803	Gender call for sample /data/outbred_jerome/CEL_files/1046046816.CEL: meanY=234.13; meanX=940.666; ratio=0.248898
04/18/2011 15:04:20	32227	104	17406	22595	23404	23404	809	809	718	777	Progress Step
04/18/2011 15:04:20	32227	94	17406	22595	23404	23404	809	809	744	803	Gender call for sample /data/outbred_jerome/CEL_files/1046046818.CEL: meanY=682.19; meanX=795.076; ratio=0.858019
04/18/2011 15:04:21	32227	101	17406	22595	23404	23404	808	808	718	777	Progress Step
04/18/2011 15:04:21	32227	100	17405	22596	23404	23404	808	808	744	803	Gender call for sample /data/outbred_jerome/CEL_files/1046046822.CEL: meanY=642.55; meanX=727.568; ratio=0.883148
04/18/2011 15:04:22	32227	103	17405	22596	23404	23404	808	808	718	777	Progress Step
04/18/2011 15:04:22	32227	100	17405	22596	23404	23404	808	808	744	803	Gender call for sample /data/outbred_jerome/CEL_files/1046046824.CEL: meanY=673.68; meanX=774.716; ratio=0.869583
04/18/2011 15:04:23	32227	102	17405	22596	23404	23404	808	808	718	777	Progress Step
04/18/2011 15:04:23	32227	99	17405	22596	23404	23404	808	808	744	803	Gender call for sample /data/outbred_jerome/CEL_files/1046046826.CEL: meanY=846.7; meanX=957.226; ratio=0.884535
04/18/2011 15:04:24	32227	102	17405	22596	23404	23404	808	808	718	777	Progress Step
04/18/2011 15:04:24	32227	103	17405	22596	23404	23404	808	808	744	803	Gender call for sample /data/outbred_jerome/CEL_files/1046047072.CEL: meanY=583.65; meanX=667.788; ratio=0.874005
04/18/2011 15:04:25	32227	103	17405	22596	23404	23404	808	808	718	777	Progress Step
04/18/2011 15:04:25	32227	101	17404	22596	23404	23404	808	808	744	803	Gender call for sample /data/outbred_jerome/CEL_files/1046047119.CEL: meanY=282.43; meanX=330.712; ratio=0.854006
04/18/2011 15:04:26	32227	101	17404	22596	23404	23404	808	808	718	777	Progress Step
04/18/2011 15:04:27	32227	100	17404	22596	23404	23404	808	808	744	803	Gender call for sample /data/outbred_jerome/CEL_files/1046047340.CEL: meanY=218; meanX=690.134; ratio=0.315881
04/18/2011 15:04:27	32227	103	17404	22596	23404	23404	808	808	718	777	Progress Step
04/18/2011 15:04:28	32227	98	17404	22595	23404	23404	808	808	744	803	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_36.CEL: meanY=430.62; meanX=553.538; ratio=0.777941
04/18/2011 15:04:28	32227	101	17404	22595	23404	23404	808	808	718	777	Progress Step
04/18/2011 15:04:29	32227	99	17404	22595	23404	23404	809	809	744	803	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_37.CEL: meanY=328.71; meanX=401.786; ratio=0.818122
04/18/2011 15:04:29	32227	102	17404	22596	23404	23404	808	808	718	777	Progress Step
04/18/2011 15:04:30	32227	101	17403	22595	23404	23404	809	809	744	803	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_38.CEL: meanY=363.02; meanX=458.62; ratio=0.791549
04/18/2011 15:04:31	32227	104	17403	22595	23404	23404	808	808	718	777	Progress Step
04/18/2011 15:04:31	32227	94	17403	22596	23404	23404	807	807	744	803	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_39.CEL: meanY=343.96; meanX=404.084; ratio=0.851209
04/18/2011 15:04:32	32227	103	17403	22596	23404	23404	807	807	718	777	Progress Step
04/18/2011 15:04:32	32227	101	17403	22595	23404	23404	808	808	744	803	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_40.CEL: meanY=288.77; meanX=382.188; ratio=0.755571
04/18/2011 15:04:33	32227	101	17403	22595	23404	23404	808	808	718	777	Progress Step
04/18/2011 15:04:33	32227	100	17403	22595	23404	23404	808	808	744	803	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_42.CEL: meanY=243.34; meanX=365.396; ratio=0.665962
04/18/2011 15:04:34	32227	100	17403	22595	23404	23404	808	808	718	777	Progress Step
04/18/2011 15:04:34	32227	99	17402	22568	23404	23404	835	835	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_43.CEL: meanY=390.85; meanX=487.874; ratio=0.801129
04/18/2011 15:04:35	32227	102	17402	22568	23404	23404	835	835	744	803	Progress Step
04/18/2011 15:04:36	32227	668	17394	22563	23404	23404	840	840	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_44.CEL: meanY=518.55; meanX=593.17; ratio=0.874201
04/18/2011 15:04:36	32227	671	17394	22566	23404	23404	838	838	744	803	Progress Step
04/18/2011 15:04:39	32227	592	17394	22565	23404	23404	838	838	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_45.CEL: meanY=631.13; meanX=748.8; ratio=0.842855
04/18/2011 15:04:40	32227	606	17394	22580	23404	23404	824	824	744	803	Progress Step
04/18/2011 15:04:41	32227	536	17394	22579	23404	23404	824	824	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_46.CEL: meanY=525.86; meanX=619.568; ratio=0.848753
04/18/2011 15:04:41	32227	536	17394	22579	23404	23404	824	824	744	803	Progress Step
04/18/2011 15:04:42	32227	478	17394	22579	23404	23404	825	825	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_47.CEL: meanY=498.67; meanX=604.624; ratio=0.82476
04/18/2011 15:04:42	32227	478	17394	22579	23404	23404	825	825	744	803	Progress Step
04/18/2011 15:04:43	32227	420	17394	22577	23404	23404	826	826	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_48.CEL: meanY=519.62; meanX=645.3; ratio=0.805238
04/18/2011 15:04:44	32227	420	17394	22578	23404	23404	826	826	744	803	Progress Step
04/18/2011 15:04:44	32227	363	17394	22576	23404	23404	827	827	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_49.CEL: meanY=449.51; meanX=569.808; ratio=0.78888
04/18/2011 15:04:45	32227	363	17394	22576	23404	23404	827	827	744	803	Progress Step
04/18/2011 15:04:45	32227	309	17394	22575	23404	23404	829	829	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_51.CEL: meanY=217.24; meanX=1041.34; ratio=0.208615
04/18/2011 15:04:46	32227	309	17394	22575	23404	23404	829	829	744	803	Progress Step
04/18/2011 15:04:46	32227	255	17394	22573	23404	23404	830	830	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_52.CEL: meanY=181.25; meanX=594.922; ratio=0.304662
04/18/2011 15:04:47	32227	255	17394	22573	23404	23404	830	830	744	803	Progress Step
04/18/2011 15:04:47	32227	201	17394	22572	23404	23404	831	831	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_53.CEL: meanY=205.9; meanX=850.394; ratio=0.242123
04/18/2011 15:04:48	32227	201	17394	22572	23404	23404	831	831	744	803	Progress Step
04/18/2011 15:04:48	32227	147	17394	22571	23404	23404	832	832	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_54.CEL: meanY=216.37; meanX=876.868; ratio=0.246753
04/18/2011 15:04:49	32227	146	17394	22570	23404	23404	833	833	744	803	Progress Step
04/18/2011 15:04:49	32227	100	17394	22568	23404	23404	836	836	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_55.CEL: meanY=197.42; meanX=805.864; ratio=0.244979
04/18/2011 15:04:50	32227	102	17394	22568	23404	23404	836	836	744	803	Progress Step
04/18/2011 15:04:51	32227	95	17394	22568	23404	23404	836	836	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_56.CEL: meanY=431.72; meanX=545.026; ratio=0.792109
04/18/2011 15:04:51	32227	104	17394	22568	23404	23404	835	835	744	803	Progress Step
04/18/2011 15:04:52	32227	96	17394	22569	23404	23404	834	834	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_57.CEL: meanY=184.99; meanX=763.398; ratio=0.242324
04/18/2011 15:04:52	32227	105	17394	22569	23404	23404	835	835	744	803	Progress Step
04/18/2011 15:04:53	32227	95	17394	22568	23404	23404	835	835	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_58.CEL: meanY=197.79; meanX=621.562; ratio=0.318214
04/18/2011 15:04:53	32227	104	17394	22569	23404	23404	835	835	744	803	Progress Step
04/18/2011 15:04:54	32227	102	17394	22568	23404	23404	836	836	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_59.CEL: meanY=244.29; meanX=306.008; ratio=0.798312
04/18/2011 15:04:54	32227	102	17394	22568	23404	23404	836	836	744	803	Progress Step
04/18/2011 15:04:55	32227	94	17394	22567	23404	23404	836	836	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_60.CEL: meanY=177.16; meanX=698.642; ratio=0.253578
04/18/2011 15:04:55	32227	103	17394	22568	23404	23404	835	835	744	803	Progress Step
04/18/2011 15:04:56	32227	96	17394	22568	23404	23404	835	835	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_61.CEL: meanY=213.75; meanX=1242.21; ratio=0.172072
04/18/2011 15:04:56	32227	103	17394	22568	23404	23404	835	835	744	803	Progress Step
04/18/2011 15:04:57	32227	103	17394	22568	23404	23404	835	835	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_62.CEL: meanY=263.87; meanX=1420.9; ratio=0.185706
04/18/2011 15:04:57	32227	102	17394	22568	23404	23404	836	836	744	803	Progress Step
04/18/2011 15:04:58	32227	102	17394	22567	23404	23404	836	836	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_63.CEL: meanY=220.68; meanX=1375.02; ratio=0.160492
04/18/2011 15:04:59	32227	102	17394	22568	23404	23404	836	836	744	803	Progress Step
04/18/2011 15:04:59	32227	101	17394	22567	23404	23404	837	837	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_64.CEL: meanY=215.12; meanX=1300.43; ratio=0.165422
04/18/2011 15:05:00	32227	101	17394	22567	23404	23404	836	836	744	803	Progress Step
04/18/2011 15:05:00	32227	99	17394	22567	23404	23404	836	836	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_65.CEL: meanY=205.97; meanX=1517.57; ratio=0.135723
04/18/2011 15:05:01	32227	103	17394	22566	23404	23404	837	837	744	803	Progress Step
04/18/2011 15:05:01	32227	103	17394	22566	23404	23404	837	837	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_66.CEL: meanY=525.61; meanX=814.282; ratio=0.645489
04/18/2011 15:05:02	32227	102	17394	22566	23404	23404	837	837	744	803	Progress Step
04/18/2011 15:05:02	32227	102	17394	22566	23404	23404	837	837	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_67.CEL: meanY=272.26; meanX=1798.78; ratio=0.151358
04/18/2011 15:05:03	32227	102	17394	22566	23404	23404	837	837	744	803	Progress Step
04/18/2011 15:05:03	32227	101	17394	22566	23404	23404	837	837	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_68.CEL: meanY=672.72; meanX=823.242; ratio=0.817159
04/18/2011 15:05:04	32227	101	17394	22566	23404	23404	838	838	744	803	Progress Step
04/18/2011 15:05:04	32227	100	17393	22565	23404	23404	839	839	771	830	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_69.CEL: meanY=294.27; meanX=1637.75; ratio=0.179679
04/18/2011 15:05:05	32227	103	17393	22565	23404	23404	838	838	745	804	Progress Step
04/18/2011 15:05:05	32227	103	17393	22538	23404	23404	865	865	797	857	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_70.CEL: meanY=356.25; meanX=1885.06; ratio=0.188986
04/18/2011 15:05:06	32227	103	17393	22539	23404	23404	864	864	771	830	Progress Step
04/18/2011 15:05:06	32227	94	17393	22539	23404	23404	864	864	797	857	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_71.CEL: meanY=292.08; meanX=1788.9; ratio=0.163274
04/18/2011 15:05:07	32227	103	17393	22539	23404	23404	864	864	771	830	Progress Step
04/18/2011 15:05:07	32227	103	17393	22540	23404	23404	864	864	797	857	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_72.CEL: meanY=262.01; meanX=1633.17; ratio=0.160431
04/18/2011 15:05:08	32227	103	17393	22540	23404	23404	864	864	771	830	Progress Step
04/18/2011 15:05:09	32227	100	17393	22539	23404	23404	865	865	797	857	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_73.CEL: meanY=257.13; meanX=1489.49; ratio=0.17263
04/18/2011 15:05:09	32227	103	17393	22539	23404	23404	865	865	771	830	Progress Step
04/18/2011 15:05:10	32227	868	17389	22535	23404	23404	868	868	797	857	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_74.CEL: meanY=361; meanX=2025.87; ratio=0.178195
04/18/2011 15:05:10	32227	1177	17389	22536	23404	23404	867	867	771	830	Progress Step
04/18/2011 15:05:11	32227	1559	17388	22545	23404	23404	859	859	797	857	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_75.CEL: meanY=242.48; meanX=1386.13; ratio=0.174933
04/18/2011 15:05:11	32227	1566	17388	22545	23404	23404	859	859	771	830	Progress Step
04/18/2011 15:05:12	32227	1642	17388	22546	23404	23404	857	857	797	857	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_76.CEL: meanY=250.05; meanX=1631.23; ratio=0.153289
04/18/2011 15:05:12	32227	1650	17388	22547	23404	23404	857	857	771	830	Progress Step
04/18/2011 15:05:13	32227	1607	17388	22547	23404	23404	856	856	797	857	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_77.CEL: meanY=197.52; meanX=1100.11; ratio=0.179546
04/18/2011 15:05:13	32227	1608	17388	22548	23404	23404	856	856	771	830	Progress Step
04/18/2011 15:05:14	32227	1583	17388	22562	23404	23404	841	841	797	857	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_78.CEL: meanY=254.68; meanX=1279.75; ratio=0.199008
04/18/2011 15:05:14	32227	1583	17388	22562	23404	23404	841	841	771	830	Progress Step
04/18/2011 15:05:16	32227	1529	17388	22562	23404	23404	841	841	797	857	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_80.CEL: meanY=530.85; meanX=677.102; ratio=0.784003
04/18/2011 15:05:17	32227	1529	17388	22562	23404	23404	841	841	771	830	Progress Step
04/18/2011 15:05:18	32227	1477	17388	22563	23404	23404	841	841	797	857	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_81.CEL: meanY=538.21; meanX=702.69; ratio=0.765928
04/18/2011 15:05:18	32227	1477	17388	22563	23404	23404	841	841	771	830	Progress Step
04/18/2011 15:05:19	32227	1422	17388	22561	23404	23404	842	842	797	857	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_82.CEL: meanY=630.12; meanX=760.928; ratio=0.828094
04/18/2011 15:05:19	32227	1423	17388	22562	23404	23404	842	842	771	830	Progress Step
04/18/2011 15:05:20	32227	1369	17388	22560	23404	23404	843	843	797	857	Gender call for sample /data/outbred_jerome/CEL_files/JN_CFW_83.CEL: meanY=601.76; meanX=769.484; ratio=0.782031
04/18/2011 15:05:20	32227	1369	17388	22560	23404	23404	843	843	771	830	Done.	3.03 minute run time
04/18/2011 15:05:20	32227	1369	17388	22560	23404	23404	843	843	771	830	Processing 1 chipstream.
04/18/2011 15:05:20	32227	1369	17388	22560	23404	23404	843	843	771	830	Computing sketch normalization for 156 cel datasets
04/18/2011 15:05:20	32227	1369	17388	22560	23404	23404	843	843	771	830	Progress Step
04/18/2011 15:05:21	32227	1343	17388	22534	23404	23404	869	869	797	857	Progress Step
04/18/2011 15:05:21	32227	1343	17388	22535	23404	23404	869	869	797	857	Progress Step
04/18/2011 15:05:22	32227	1343	17388	22535	23404	23404	869	869	797	857	Progress Step
04/18/2011 15:05:23	32227	1343	17388	22535	23404	23404	869	869	797	857	Progress Step
04/18/2011 15:05:23	32227	1344	17388	22535	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:24	32227	1344	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:24	32227	1344	17388	22535	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:25	32227	1344	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:26	32227	1344	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:26	32227	1344	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:27	32227	1344	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:27	32227	1344	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:28	32227	1344	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:28	32227	1344	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:29	32227	1344	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:30	32227	1344	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:30	32227	1344	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:31	32227	1344	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:31	32227	1344	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:32	32227	1344	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:33	32227	1344	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:33	32227	1344	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:34	32227	1344	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:34	32227	1344	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:35	32227	1344	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:36	32227	1344	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:36	32227	1344	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:37	32227	1344	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:37	32227	1344	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:38	32227	1344	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:38	32227	1343	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:39	32227	1343	17388	22535	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:40	32227	1343	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:40	32227	1343	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:41	32227	1344	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:41	32227	1343	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:42	32227	1343	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:42	32227	1343	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:43	32227	1343	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:44	32227	1343	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:44	32227	1343	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:45	32227	1327	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:46	32227	1301	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:46	32227	1275	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:47	32227	1249	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:48	32227	1224	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:48	32227	1223	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:49	32227	1222	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:49	32227	1220	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:50	32227	1218	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:51	32227	1216	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:51	32227	1215	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:52	32227	1214	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:53	32227	1213	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:53	32227	1213	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:54	32227	1212	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:54	32227	1210	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:55	32227	1210	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:56	32227	1210	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:56	32227	1210	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:57	32227	1210	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:57	32227	1210	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:58	32227	1210	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:05:58	32227	1210	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:05:59	32227	1210	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:06:00	32227	1210	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:06:00	32227	1210	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:06:01	32227	1210	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:06:01	32227	1210	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:06:02	32227	1210	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:06:02	32227	1209	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:06:03	32227	1209	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:06:04	32227	1209	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:06:04	32227	1209	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:06:05	32227	1209	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:06:05	32227	1205	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:06:06	32227	1199	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:06:07	32227	1194	17388	22536	23404	23404	868	868	797	857	Progress Step
04/18/2011 15:06:07	32227	1190	17388	22536	23404	23404	867	867	797	857	Progress Step
04/18/2011 15:06:08	32227	1186	17388	22536	23404	23404	868	868	798	857	Progress Step
04/18/2011 15:06:09	32227	1181	17388	22536	23404	23404	867	867	798	857	Progress Step
04/18/2011 15:06:09	32227	1176	17388	22535	23404	23404	868	868	798	857	Progress Step
04/18/2011 15:06:10	32227	1171	17388	22535	23404	23404	868	868	798	857	Progress Step
04/18/2011 15:06:10	32227	1163	17388	22535	23404	23404	869	869	798	857	Progress Step
04/18/2011 15:06:11	32227	1154	17388	22534	23404	23404	869	869	799	858	Progress Step
04/18/2011 15:06:12	32227	1147	17388	22534	23404	23404	869	869	799	858	Progress Step
04/18/2011 15:06:12	32227	1146	17388	22534	23404	23404	869	869	799	858	Progress Step
04/18/2011 15:06:13	32227	1146	17388	22534	23404	23404	869	869	799	858	Progress Step
04/18/2011 15:06:13	32227	1146	17388	22534	23404	23404	870	870	799	858	Progress Step
04/18/2011 15:06:14	32227	1146	17388	22533	23404	23404	870	870	800	859	Progress Step
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04/18/2011 15:06:15	32227	1145	17388	22533	23404	23404	870	870	800	859	Progress Step
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04/18/2011 15:06:17	32227	1144	17388	22533	23404	23404	871	871	800	859	Progress Step
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04/18/2011 15:06:18	32227	1144	17388	22533	23404	23404	871	871	801	860	Progress Step
04/18/2011 15:06:19	32227	1144	17388	22533	23404	23404	871	871	801	860	Progress Step
04/18/2011 15:06:19	32227	1143	17388	22532	23404	23404	871	871	801	860	Progress Step
04/18/2011 15:06:20	32227	1143	17388	22532	23404	23404	871	871	801	860	Progress Step
04/18/2011 15:06:21	32227	1142	17388	22532	23404	23404	872	872	801	861	Progress Step
04/18/2011 15:06:21	32227	1140	17388	22531	23404	23404	872	872	802	861	Progress Step
04/18/2011 15:06:22	32227	1137	17388	22531	23404	23404	872	872	802	861	Progress Step
04/18/2011 15:06:22	32227	1135	17388	22531	23404	23404	872	872	802	861	Progress Step
04/18/2011 15:06:23	32227	1132	17388	22531	23404	23404	873	873	802	861	Progress Step
04/18/2011 15:06:24	32227	1130	17388	22531	23404	23404	873	873	802	861	Progress Step
04/18/2011 15:06:24	32227	1127	17388	22530	23404	23404	873	873	803	862	Progress Step
04/18/2011 15:06:25	32227	1125	17388	22531	23404	23404	873	873	803	862	Progress Step
04/18/2011 15:06:26	32227	1122	17388	22530	23404	23404	873	873	803	862	Progress Step
04/18/2011 15:06:26	32227	1119	17388	22530	23404	23404	873	873	803	862	Progress Step
04/18/2011 15:06:27	32227	1117	17388	22530	23404	23404	874	874	803	862	Progress Step
04/18/2011 15:06:27	32227	1116	17388	22530	23404	23404	874	874	804	863	Progress Step
04/18/2011 15:06:28	32227	1116	17388	22530	23404	23404	874	874	804	863	Progress Step
04/18/2011 15:06:28	32227	1115	17388	22529	23404	23404	874	874	804	863	Progress Step
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04/18/2011 15:06:30	32227	1115	17388	22529	23404	23404	874	874	804	863	Progress Step
04/18/2011 15:06:30	32227	1115	17388	22529	23404	23404	875	875	805	864	Progress Step
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04/18/2011 15:06:32	32227	1113	17388	22528	23404	23404	876	876	805	864	Progress Step
04/18/2011 15:06:33	32227	1113	17388	22528	23404	23404	876	876	805	865	Progress Step
04/18/2011 15:06:34	32227	1113	17388	22527	23404	23404	876	876	806	865	Progress Step
04/18/2011 15:06:34	32227	1113	17388	22527	23404	23404	877	877	806	865	Progress Step
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04/18/2011 15:06:35	32227	1112	17388	22527	23404	23404	877	877	806	865	Progress Step
04/18/2011 15:06:36	32227	1112	17388	22527	23404	23404	877	877	806	865	Progress Step
04/18/2011 15:06:36	32227	1112	17388	22526	23404	23404	877	877	807	866	Progress Step
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04/18/2011 15:06:38	32227	1111	17388	22526	23404	23404	878	878	807	866	Progress Step
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04/18/2011 15:06:39	32227	1111	17388	22525	23404	23404	878	878	808	867	Progress Step
04/18/2011 15:06:40	32227	1111	17388	22525	23404	23404	878	878	808	867	Progress Step
04/18/2011 15:06:40	32227	1110	17388	22525	23404	23404	879	879	808	867	Progress Step
04/18/2011 15:06:41	32227	1110	17388	22525	23404	23404	879	879	808	867	Progress Step
04/18/2011 15:06:41	32227	1110	17388	22524	23404	23404	879	879	808	867	Progress Step
04/18/2011 15:06:42	32227	1110	17388	22524	23404	23404	879	879	809	868	Progress Step
04/18/2011 15:06:43	32227	1083	17388	22498	23404	23404	906	906	835	894	Progress Step
04/18/2011 15:06:43	32227	1083	17388	22498	23404	23404	905	905	835	894	Progress Step
04/18/2011 15:06:44	32227	1083	17388	22498	23404	23404	906	906	835	894	Progress Step
04/18/2011 15:06:44	32227	1083	17388	22498	23404	23404	906	906	835	894	Progress Step
04/18/2011 15:06:45	32227	1083	17388	22498	23404	23404	906	906	835	894	Progress Step
04/18/2011 15:06:45	32227	1083	17388	22498	23404	23404	906	906	835	894	Progress Step
04/18/2011 15:06:46	32227	1083	17388	22498	23404	23404	906	906	835	894	Progress Step
04/18/2011 15:06:47	32227	1083	17388	22498	23404	23404	905	905	835	894	Progress Step
04/18/2011 15:06:47	32227	1077	17388	22483	23404	23404	920	920	835	894	Progress Step
04/18/2011 15:06:48	32227	1091	17387	22488	23404	23404	916	916	835	894	Progress Step
04/18/2011 15:06:49	32227	1084	17387	22482	23404	23404	922	922	835	894	Progress Step
04/18/2011 15:06:49	32227	1101	17387	22499	23404	23404	905	905	835	894	Progress Step
04/18/2011 15:06:50	32227	1101	17387	22499	23404	23404	905	905	835	894	Progress Step
04/18/2011 15:06:50	32227	1101	17387	22499	23404	23404	905	905	835	894	Progress Step
04/18/2011 15:06:51	32227	1101	17387	22499	23404	23404	905	905	835	894	Progress Step
04/18/2011 15:06:51	32227	1101	17387	22499	23404	23404	905	905	835	894	Progress Step
04/18/2011 15:06:52	32227	1101	17387	22499	23404	23404	905	905	835	894	Progress Step
04/18/2011 15:06:53	32227	1101	17387	22499	23404	23404	905	905	835	894	Progress Step
04/18/2011 15:06:53	32227	1101	17387	22499	23404	23404	905	905	835	894	Done.	1.55 minute run time
04/18/2011 15:06:53	32227	1101	17387	22499	23404	23404	905	905	835	894	Applying sketch normalization to 156 cel datasets
04/18/2011 15:06:53	32227	1101	17387	22499	23404	23404	905	905	835	894	Progress Step
04/18/2011 15:06:54	32227	1110	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:06:56	32227	1110	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:06:57	32227	1110	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:06:59	32227	1110	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:00	32227	1110	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:02	32227	1110	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:03	32227	1110	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:04	32227	1110	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:06	32227	1110	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:07	32227	1110	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:08	32227	1110	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:10	32227	1110	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:11	32227	1110	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:13	32227	1110	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:14	32227	1110	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:15	32227	1110	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:17	32227	1110	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:18	32227	1110	17387	22508	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:20	32227	1108	17387	22505	23404	23404	898	898	826	894	Progress Step
04/18/2011 15:07:21	32227	1109	17387	22506	23404	23404	897	897	826	894	Progress Step
04/18/2011 15:07:22	32227	1109	17387	22506	23404	23404	897	897	826	894	Progress Step
04/18/2011 15:07:24	32227	1109	17387	22506	23404	23404	897	897	826	894	Progress Step
04/18/2011 15:07:25	32227	1109	17387	22506	23404	23404	897	897	826	894	Progress Step
04/18/2011 15:07:27	32227	1109	17387	22507	23404	23404	897	897	826	894	Progress Step
04/18/2011 15:07:28	32227	1109	17387	22506	23404	23404	897	897	826	894	Progress Step
04/18/2011 15:07:29	32227	1109	17387	22507	23404	23404	897	897	826	894	Progress Step
04/18/2011 15:07:31	32227	1109	17387	22507	23404	23404	897	897	826	894	Progress Step
04/18/2011 15:07:32	32227	1109	17387	22507	23404	23404	897	897	826	894	Progress Step
04/18/2011 15:07:34	32227	1109	17387	22507	23404	23404	897	897	826	894	Progress Step
04/18/2011 15:07:35	32227	1109	17387	22507	23404	23404	897	897	826	894	Progress Step
04/18/2011 15:07:36	32227	1109	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:38	32227	1109	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:39	32227	1109	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:41	32227	1109	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:42	32227	1109	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:43	32227	1109	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:45	32227	1109	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:46	32227	1110	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:48	32227	1109	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:49	32227	1109	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:51	32227	1109	17387	22507	23404	23404	897	897	826	894	Progress Step
04/18/2011 15:07:52	32227	1110	17387	22507	23404	23404	896	896	826	894	Progress Step
04/18/2011 15:07:53	32227	1109	17387	22507	23404	23404	897	897	826	894	Progress Step
04/18/2011 15:07:55	32227	1108	17387	22506	23404	23404	897	897	826	894	Progress Step
04/18/2011 15:07:56	32227	1108	17387	22506	23404	23404	898	898	826	894	Progress Step
04/18/2011 15:07:58	32227	1107	17387	22505	23404	23404	898	898	826	894	Progress Step
04/18/2011 15:07:59	32227	1107	17387	22505	23404	23404	898	898	826	894	Progress Step
04/18/2011 15:08:00	32227	1107	17387	22505	23404	23404	898	898	826	894	Progress Step
04/18/2011 15:08:02	32227	1107	17387	22505	23404	23404	898	898	826	894	Progress Step
04/18/2011 15:08:03	32227	1107	17387	22505	23404	23404	898	898	826	894	Progress Step
04/18/2011 15:08:05	32227	1107	17387	22505	23404	23404	898	898	826	894	Progress Step
04/18/2011 15:08:06	32227	1107	17387	22505	23404	23404	898	898	826	894	Progress Step
04/18/2011 15:08:07	32227	1107	17387	22505	23404	23404	898	898	826	894	Progress Step
04/18/2011 15:08:09	32227	1107	17387	22505	23404	23404	898	898	826	894	Progress Step
04/18/2011 15:08:10	32227	1107	17387	22505	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:12	32227	1107	17387	22505	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:13	32227	1106	17387	22504	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:15	32227	1107	17387	22505	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:16	32227	1107	17387	22505	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:18	32227	1107	17387	22505	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:19	32227	1107	17387	22505	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:20	32227	1107	17387	22505	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:22	32227	1107	17387	22505	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:23	32227	1107	17387	22505	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:25	32227	1107	17387	22505	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:26	32227	1092	17387	22490	23404	23404	914	914	826	894	Progress Step
04/18/2011 15:08:28	32227	1107	17387	22505	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:29	32227	1107	17387	22505	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:30	32227	1107	17387	22505	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:32	32227	1107	17387	22505	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:33	32227	1107	17387	22505	23404	23404	898	898	826	894	Progress Step
04/18/2011 15:08:35	32227	1107	17387	22505	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:36	32227	1107	17387	22505	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:38	32227	1107	17387	22505	23404	23404	898	898	826	894	Progress Step
04/18/2011 15:08:39	32227	1107	17387	22505	23404	23404	898	898	826	894	Progress Step
04/18/2011 15:08:41	32227	1107	17387	22505	23404	23404	898	898	826	894	Progress Step
04/18/2011 15:08:42	32227	1107	17387	22505	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:43	32227	1107	17387	22505	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:45	32227	1107	17387	22505	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:46	32227	1107	17387	22505	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:48	32227	1107	17387	22505	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:49	32227	1107	17387	22505	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:51	32227	1107	17387	22505	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:52	32227	1106	17387	22504	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:54	32227	1106	17387	22504	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:55	32227	1106	17387	22504	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:56	32227	1106	17387	22504	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:58	32227	1106	17387	22504	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:08:59	32227	1106	17387	22504	23404	23404	899	899	826	894	Progress Step
04/18/2011 15:09:01	32227	1106	17387	22504	23404	23404	900	900	826	894	Progress Step
04/18/2011 15:09:02	32227	1091	17387	22490	23404	23404	914	914	826	894	Progress Step
04/18/2011 15:09:04	32227	1103	17387	22502	23404	23404	902	902	826	894	Progress Step
04/18/2011 15:09:05	32227	1104	17387	22502	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:09:06	32227	1104	17387	22502	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:09:08	32227	1104	17387	22502	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:09:09	32227	1104	17387	22503	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:09:11	32227	1104	17387	22503	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:09:12	32227	1104	17387	22503	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:09:14	32227	1104	17387	22503	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:09:15	32227	1104	17387	22503	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:09:16	32227	1104	17387	22503	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:09:18	32227	1104	17387	22503	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:09:19	32227	1104	17387	22503	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:09:21	32227	1104	17387	22503	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:09:22	32227	1104	17387	22503	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:09:24	32227	1104	17387	22503	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:09:25	32227	1104	17387	22503	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:09:26	32227	1104	17387	22503	23404	23404	900	900	826	894	Progress Step
04/18/2011 15:09:28	32227	1104	17387	22503	23404	23404	900	900	826	894	Progress Step
04/18/2011 15:09:29	32227	1104	17387	22503	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:09:31	32227	1104	17387	22503	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:09:32	32227	1104	17387	22503	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:09:34	32227	1104	17387	22503	23404	23404	900	900	826	894	Progress Step
04/18/2011 15:09:35	32227	1105	17387	22503	23404	23404	900	900	826	894	Progress Step
04/18/2011 15:09:37	32227	1105	17387	22503	23404	23404	900	900	826	894	Progress Step
04/18/2011 15:09:38	32227	1091	17387	22489	23404	23404	914	914	826	894	Progress Step
04/18/2011 15:09:40	32227	1104	17387	22503	23404	23404	900	900	826	894	Progress Step
04/18/2011 15:09:41	32227	1104	17387	22503	23404	23404	900	900	826	894	Progress Step
04/18/2011 15:09:42	32227	1104	17387	22503	23404	23404	900	900	826	894	Progress Step
04/18/2011 15:09:44	32227	1104	17387	22503	23404	23404	900	900	826	894	Progress Step
04/18/2011 15:09:45	32227	1104	17387	22503	23404	23404	900	900	826	894	Progress Step
04/18/2011 15:09:47	32227	1104	17387	22503	23404	23404	900	900	826	894	Progress Step
04/18/2011 15:09:48	32227	1104	17387	22503	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:09:50	32227	1101	17387	22499	23404	23404	904	904	826	894	Progress Step
04/18/2011 15:09:51	32227	1104	17387	22503	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:09:53	32227	1104	17387	22503	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:09:54	32227	1104	17387	22503	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:09:55	32227	1104	17387	22503	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:09:57	32227	1104	17387	22503	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:09:58	32227	1104	17387	22503	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:10:00	32227	1104	17387	22503	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:10:01	32227	1104	17387	22503	23404	23404	901	901	826	894	Progress Step
04/18/2011 15:10:03	32227	1104	17387	22503	23404	23404	900	900	826	894	Progress Step
04/18/2011 15:10:04	32227	1104	17387	22503	23404	23404	900	900	826	894	Progress Step
04/18/2011 15:10:06	32227	1104	17387	22503	23404	23404	900	900	826	894	Progress Step
04/18/2011 15:10:07	32227	1104	17387	22503	23404	23404	900	900	826	894	Progress Step
04/18/2011 15:10:09	32227	1105	17387	22503	23404	23404	900	900	826	894	Progress Step
04/18/2011 15:10:10	32227	1127	17387	22525	23404	23404	878	878	804	872	Progress Step
04/18/2011 15:10:11	32227	1092	17387	22490	23404	23404	913	913	839	898	Progress Step
04/18/2011 15:10:13	32227	1092	17387	22490	23404	23404	913	913	839	898	Progress Step
04/18/2011 15:10:14	32227	1078	17387	22476	23404	23404	927	927	839	898	Progress Step
04/18/2011 15:10:16	32227	1091	17387	22490	23404	23404	914	914	839	898	Progress Step
04/18/2011 15:10:17	32227	1092	17387	22490	23404	23404	913	913	839	898	Progress Step
04/18/2011 15:10:19	32227	1091	17387	22490	23404	23404	914	914	839	898	Progress Step
04/18/2011 15:10:20	32227	1091	17387	22490	23404	23404	914	914	839	898	Progress Step
04/18/2011 15:10:21	32227	1091	17387	22490	23404	23404	914	914	839	898	Progress Step
04/18/2011 15:10:23	32227	1091	17387	22490	23404	23404	914	914	839	898	Progress Step
04/18/2011 15:10:24	32227	1091	17387	22490	23404	23404	914	914	839	898	Progress Step
04/18/2011 15:10:26	32227	1091	17387	22490	23404	23404	914	914	839	898	Progress Step
04/18/2011 15:10:27	32227	1091	17387	22490	23404	23404	914	914	839	898	Progress Step
04/18/2011 15:10:28	32227	1091	17387	22490	23404	23404	914	914	839	898	Progress Step
04/18/2011 15:10:30	32227	1091	17387	22490	23404	23404	914	914	839	898	Progress Step
04/18/2011 15:10:31	32227	1091	17387	22490	23404	23404	914	914	839	898	Progress Step
04/18/2011 15:10:33	32227	1091	17387	22490	23404	23404	914	914	839	898	Progress Step
04/18/2011 15:10:34	32227	1091	17387	22490	23404	23404	914	914	839	898	Progress Step
04/18/2011 15:10:36	32227	1091	17387	22490	23404	23404	914	914	839	898	Done.	3.72 minute run time
04/18/2011 15:10:36	32227	1091	17387	22490	23404	23404	914	914	839	898	Finalizing 1 chipstream.
04/18/2011 15:10:36	32227	1117	17387	22515	23404	23404	888	888	813	872	Using gender method cn-probe-chrXY-ratio for genotype calling.
04/18/2011 15:10:36	32227	1117	17387	22515	23404	23404	888	888	813	872	Using inbred covariates none for genotype calling.
04/18/2011 15:10:36	32227	1117	17387	22515	23404	23404	888	888	813	872	Setting analysis info.
04/18/2011 15:10:36	32227	1117	17387	22515	23404	23404	888	888	813	872	Got 227 headers to write.
04/18/2011 15:10:36	32227	1117	17387	22515	23404	23404	888	888	813	872	Maximum name length is: 30
04/18/2011 15:10:36	32227	1117	17387	22515	23404	23404	888	888	813	872	Processing probesets
04/18/2011 15:10:36	32227	1117	17387	22515	23404	23404	888	888	813	872	Progress Step
04/18/2011 15:11:29	32227	910	17387	22415	23404	23404	988	988	911	970	Progress Step
04/18/2011 15:12:21	32227	799	17387	22411	23404	23404	992	992	911	970	Progress Step
04/18/2011 15:13:14	32227	689	17387	22409	23404	23404	995	995	911	970	Progress Step
04/18/2011 15:14:06	32227	579	17387	22405	23404	23404	998	998	911	970	Progress Step
04/18/2011 15:14:57	32227	470	17387	22403	23404	23404	1001	1001	911	970	Progress Step
04/18/2011 15:15:51	32227	360	17387	22399	23404	23404	1004	1004	911	970	Progress Step
04/18/2011 15:16:42	32227	250	17387	22396	23404	23404	1008	1008	911	970	Progress Step
04/18/2011 15:17:34	32227	140	17387	22393	23404	23404	1010	1010	911	970	Progress Step
04/18/2011 15:18:27	32227	97	17386	22394	23404	23404	1010	1010	911	970	Progress Step
04/18/2011 15:19:56	32227	101	17383	22395	23404	23404	1008	1008	911	970	Progress Step
04/18/2011 15:20:55	32227	96	17381	22396	23404	23404	1007	1007	911	970	Progress Step
04/18/2011 15:21:51	32227	96	17378	22398	23404	23404	1005	1005	911	970	Progress Step
04/18/2011 15:22:50	32227	96	17376	22400	23404	23404	1004	1004	911	970	Progress Step
04/18/2011 15:23:43	32227	97	17373	22401	23404	23404	1002	1002	911	970	Progress Step
04/18/2011 15:24:37	32227	102	17370	22403	23404	23404	1001	1001	911	970	Progress Step
04/18/2011 15:25:30	32227	97	17368	22404	23404	23404	1000	1000	911	970	Progress Step
04/18/2011 15:26:23	32227	94	17365	22407	23404	23404	997	997	911	970	Progress Step
04/18/2011 15:27:17	32227	103	17362	22406	23404	23404	997	997	911	970	Progress Step
04/18/2011 15:28:10	32227	94	17360	22409	23404	23404	995	995	911	970	Progress Step
04/18/2011 15:29:02	32227	94	17358	22409	23404	23404	994	994	911	970	Progress Step
04/18/2011 15:29:56	32227	98	17356	22409	23404	23404	995	995	911	970	Progress Step
04/18/2011 15:30:49	32227	101	17354	22410	23404	23404	994	994	911	970	Progress Step
04/18/2011 15:31:43	32227	97	17352	22410	23404	23404	994	994	911	970	Progress Step
04/18/2011 15:32:36	32227	95	17350	22411	23404	23404	993	993	911	970	Progress Step
04/18/2011 15:33:28	32227	99	17348	22411	23404	23404	992	992	911	970	Progress Step
04/18/2011 15:34:22	32227	101	17346	22413	23404	23404	991	991	911	970	Progress Step
04/18/2011 15:35:16	32227	99	17344	22413	23404	23404	991	991	911	970	Progress Step
04/18/2011 15:36:08	32227	95	17342	22414	23404	23404	989	989	911	970	Progress Step
04/18/2011 15:37:02	32227	100	17341	22414	23404	23404	990	990	911	970	Progress Step
04/18/2011 15:37:54	32227	97	17340	22414	23404	23404	990	990	911	970	Progress Step
04/18/2011 15:38:48	32227	96	17353	22385	23404	23404	1018	1018	911	970	Progress Step
04/18/2011 15:39:42	32227	101	17352	22382	23404	23404	1022	1022	911	970	Progress Step
04/18/2011 15:40:35	32227	98	17351	22383	23404	23404	1020	1020	911	970	Progress Step
04/18/2011 15:41:28	32227	97	17350	22383	23404	23404	1020	1020	911	970	Progress Step
04/18/2011 15:42:22	32227	101	17349	22383	23404	23404	1021	1021	911	970	Progress Step
04/18/2011 15:43:14	32227	94	17348	22383	23404	23404	1021	1021	911	970	Progress Step
04/18/2011 15:44:06	32227	105	17347	22382	23404	23404	1022	1022	911	970	Progress Step
04/18/2011 15:45:00	32227	98	17345	22382	23404	23404	1022	1022	911	970	Progress Step
04/18/2011 15:45:52	32227	94	17344	22382	23404	23404	1022	1022	911	970	Progress Step
04/18/2011 15:47:49	32227	97	17343	22382	23404	23404	1021	1021	911	970	Progress Step
04/18/2011 15:47:49	32227	97	17343	22382	23404	23404	1021	1021	911	970	Done.	37.22 minute run time
04/18/2011 15:47:49	32227	97	17343	22382	23404	23404	1021	1021	911	970	Flushing output reporters. Finalizing output.
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	Base Engine After runImp()
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	Run took approximately: 45.93 minutes.
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'help' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'verbose' = '1'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'console-off' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'use-socket' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'version' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'force' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'throw-exception' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'analysis-files-path' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'xml-file' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'temp-dir' = '/data/outbred_jerome/ANALYSIS/all_F1_MvA_005/temp'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'out-dir' = '/data/outbred_jerome/ANALYSIS/all_F1_MvA_005'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'log-file' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'command-line' = 'apt-probeset-genotype -o /data/outbred_jerome/ANALYSIS/all_F1_MvA_005 -c /data/outbred_jerome/ANALYSIS/MOUSEDIVm520650.CDF --cel-files /data/outbred_jerome/ANALYSIS/all_f1s_cels_liste.txt -s /data/outbred_jerome/ANALYSIS/SNPsubset.txt --a quant-norm.sketch=50000,pm-only,brlmm-p.CM=1.bins=100.mix=1.bic=2.HARD=3.SB=0.75.KX=0.2.KH=0.3.KXX=-0.1.KAH=-0.1.KHB=-0.1.transform=MVA.AAM=2.0.BBM=-2.0.AAV=0.06.BBV=0.06.ABV=0.06.copyqc=0.00000.wobble=0.05.CSepThr=4.CSepPen=0.1.KYAH=-0.05.KYHB=-0.05.KYAB=-0.1.AAY=9.ABY=9.5.BBY=9.copytype=-1.clustertype=2.ocean=0.00001.MS=0.05 --read-models-brlmmp /data/outbred_jerome/ANALYSIS/Mouse.models --summaries --write-models --chrX-probes /data/outbred_jerome/ANALYSIS/Mouse.chrXprobes --chrY-probes /data/outbred_jerome/ANALYSIS/Mouse.chrYprobes --special-snps /data/outbred_jerome/ANALYSIS/Mouse.specialSNPs'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'exec-guid' = '30563b35-b30a-445b-9666-236b190296a8'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'program-name' = 'apt-probeset-genotype'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'program-company' = 'Affymetrix'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'program-version' = '1.14.2'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'program-cvs-id' = 'svn://svn.ev.affymetrix.com/apt/projects/apt/branches/APT_1_14_2_BRANCH/affy/sdk/release 16360:16361'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'version-to-report' = '1.14.2 svn://svn.ev.affymetrix.com/apt/projects/apt/branches/APT_1_14_2_BRANCH/affy/sdk/release 16360:16361 na'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'free-mem-at-start' = '24541534617'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'meta-data-info' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'cel-files' = '/data/outbred_jerome/ANALYSIS/all_f1s_cels_liste.txt'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'cdf-file' = '/data/outbred_jerome/ANALYSIS/MOUSEDIVm520650.CDF'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'spf-file' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'chrX-snps' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'special-snps' = '/data/outbred_jerome/ANALYSIS/Mouse.specialSNPs'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'chrX-probes' = '/data/outbred_jerome/ANALYSIS/Mouse.chrXprobes'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'chrY-probes' = '/data/outbred_jerome/ANALYSIS/Mouse.chrYprobes'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'chrZ-probes' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'chrW-probes' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'probeset-ids' = '/data/outbred_jerome/ANALYSIS/SNPsubset.txt'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'probeset-ids-reported' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'probe-class-file' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'chip-type' = 'MOUSEDIVm520650'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'annotation-file' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'genotype-markers-cn-file' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'file5-compact' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'sqlite-output' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'table-output' = 'true'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'output-forced-calls' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'output-context' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'cc-chp-output' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'xda-chp-output' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'cc-chp-out-dir' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'xda-chp-out-dir' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'summaries' = 'true'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'report-file' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'analysis' = 'quant-norm.sketch=50000,pm-only,brlmm-p.CM=1.bins=100.mix=1.bic=2.HARD=3.SB=0.75.KX=0.2.KH=0.3.KXX=-0.1.KAH=-0.1.KHB=-0.1.transform=MVA.AAM=2.0.BBM=-2.0.AAV=0.06.BBV=0.06.ABV=0.06.copyqc=0.00000.wobble=0.05.CSepThr=4.CSepPen=0.1.KYAH=-0.05.KYHB=-0.05.KYAB=-0.1.AAY=9.ABY=9.5.BBY=9.copytype=-1.clustertype=2.ocean=0.00001.MS=0.05'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'qmethod-spec' = 'plier.optmethod=1'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'read-models-brlmm' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'read-models-brlmmp' = '/data/outbred_jerome/ANALYSIS/Mouse.models'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'read-models-birdseed' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'write-models' = 'true'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'db-from-prior-models' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'db-from-posterior-models' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'feat-effects' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'writeOldStyleFeatureEffectsFile' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'feat-eff-remove-allele-suffix' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'use-feat-eff' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'feat-details' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'target-sketch' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'write-sketch' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'dm-thresh' = '.17'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'reference-profile' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'write-profile' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'dm-hetmult' = '0'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'prior-size' = '10000'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'list-sample' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'read-priors-brlmm' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'write-prior' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'norm-size' = '0'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'write-norm' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'set-analysis-name' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'include-quant-in-report-file-name' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'set-gender-method' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'read-genders' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'read-inbred' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'no-gender-force' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'em-gender' = 'true'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'female-thresh' = '0.48'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'male-thresh' = '0.71'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'zw-gender-calling' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'explain' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'kill-list' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'dm-out' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'all-types' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'genotypes' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'select-probes' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'call-coder-max-alleles' = '6'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'call-coder-type' = 'UCHAR'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'call-coder-version' = '1.0'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'use-disk' = 'true'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'disk-cache' = '50'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-global-file' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-global-file-no-replace' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-group' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-calls' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-calls-use-global' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-summaries' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-summaries-use-global' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-feature-effects' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-feature-effects-use-global' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-feature-details' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-feature-details-use-global' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-sketch' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-sketch-use-global' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-write-models' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-write-models-use-global' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-global-input-file' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-input-group' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-sketch-input-global' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-sketch-input-file' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-sketch-input-group' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-sketch-input-name' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-feature-effects-input-global' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-feature-effects-input-file' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-feature-effects-input-group' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-feature-effects-input-name' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-models-input-global' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-models-input-file' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-models-input-group' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'a5-models-input-name' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'snpqc-probesets' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'cels' = '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross01.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross02.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross03.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross04.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross05.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross06.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross07.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross08.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross09.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross10.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross11.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross12.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross13.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross14.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross15.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross16.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross17.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross18.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross19.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross20.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross21.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross22.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross23.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross24.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross25.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross26.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross27.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross28.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross29.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross30.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross31.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross32.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross33.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross34.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross35.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross36.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross37.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross38.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross39.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross40.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross41.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross42.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross43.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross44.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross45.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross46.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross47.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross48.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross49.CEL', '/data/mus/martin/projects/wild/genotypes/Chips230710/CD_MOUSEDIVm520650_rev2/F1cross50.CEL', '/data/outbred_jerome/CEL_files/1046044167.CEL', '/data/outbred_jerome/CEL_files/1046044318.CEL', '/data/outbred_jerome/CEL_files/1046044367.CEL', '/data/outbred_jerome/CEL_files/1046044399.CEL', '/data/outbred_jerome/CEL_files/1046044415.CEL', '/data/outbred_jerome/CEL_files/1046044434.CEL', '/data/outbred_jerome/CEL_files/1046044456.CEL', '/data/outbred_jerome/CEL_files/1046044463.CEL', '/data/outbred_jerome/CEL_files/1046044465.CEL', '/data/outbred_jerome/CEL_files/1046044467.CEL', '/data/outbred_jerome/CEL_files/1046044473.CEL', '/data/outbred_jerome/CEL_files/1046044485.CEL', '/data/outbred_jerome/CEL_files/1046044489.CEL', '/data/outbred_jerome/CEL_files/1046044491.CEL', '/data/outbred_jerome/CEL_files/1046044654.CEL', '/data/outbred_jerome/CEL_files/1046045336.CEL', '/data/outbred_jerome/CEL_files/1046045337.CEL', '/data/outbred_jerome/CEL_files/1046045361_2.CEL', '/data/outbred_jerome/CEL_files/1046045368.CEL', '/data/outbred_jerome/CEL_files/1046045416.CEL', '/data/outbred_jerome/CEL_files/1046045447.CEL', '/data/outbred_jerome/CEL_files/1046045465.CEL', '/data/outbred_jerome/CEL_files/1046045471.CEL', '/data/outbred_jerome/CEL_files/1046045479.CEL', '/data/outbred_jerome/CEL_files/1046045484.CEL', '/data/outbred_jerome/CEL_files/1046045487.CEL', '/data/outbred_jerome/CEL_files/1046045556.CEL', '/data/outbred_jerome/CEL_files/1046045564.CEL', '/data/outbred_jerome/CEL_files/1046045568.CEL', '/data/outbred_jerome/CEL_files/1046045571.CEL', '/data/outbred_jerome/CEL_files/1046045581.CEL', '/data/outbred_jerome/CEL_files/1046045627.CEL', '/data/outbred_jerome/CEL_files/1046045633.CEL', '/data/outbred_jerome/CEL_files/1046045664.CEL', '/data/outbred_jerome/CEL_files/1046045677.CEL', '/data/outbred_jerome/CEL_files/1046045678.CEL', '/data/outbred_jerome/CEL_files/1046046639.CEL', '/data/outbred_jerome/CEL_files/1046046641.CEL', 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'/data/outbred_jerome/CEL_files/JN_CFW_75.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_76.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_77.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_78.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_80.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_81.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_82.CEL', '/data/outbred_jerome/CEL_files/JN_CFW_83.CEL'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'result-files' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'time-start' = 'Mon Apr 18 15:01:55 2011'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'time-end' = 'Mon Apr 18 15:47:51 2011'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'time-run-minutes' = '45.93'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'analysis-guid' = ''
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'analysis-count' = '1'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'num-rows' = '2572'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'num-cols' = '2680'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'probe-count' = '6892960'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'probeset-count' = '2458697'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'channel-count' = '1'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'need-gc' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'need-mismatch' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	ProbesetGenotypeEngine: Final Option 'need-allelematch' = 'false'
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	Done running ProbesetGenotypeEngine.
04/18/2011 15:47:51	32227	8447	17343	22874	23404	23404	530	530	624	655	In Base Engine Destructor