"""Tests the scriptTree jobTree-script compiler. """ import unittest import sys import os from sonLib.bioio import TestStatus from sonLib.bioio import parseSuiteTestOptions from sonLib.bioio import system from sonLib.bioio import getTempDirectory from jobTree.test.jobTree.jobTreeTest import runJobTreeStatusAndFailIfNotComplete class TestCase(unittest.TestCase): def setUp(self): unittest.TestCase.setUp(self) self.testNo = TestStatus.getTestSetup(1, 2, 10, 10) self.tempDir = getTempDirectory(os.getcwd()) self.jobTreeDir = os.path.join(self.tempDir, "jobTree") #A directory for the job tree to be created in def tearDown(self): unittest.TestCase.tearDown(self) system("rm -rf %s" % self.tempDir) #Cleanup the job tree in case it hasn't already been cleaned up. def testScriptTree_Example(self): """Uses the jobTreeTest code to test the scriptTree Target wrapper. """ for test in xrange(self.testNo): command = "scriptTreeTest_Wrapper.py --jobTree %s --logLevel=INFO --retryCount=10" % self.jobTreeDir system(command) runJobTreeStatusAndFailIfNotComplete(self.jobTreeDir) def testScriptTree_Example2(self): """Tests that the global and local temp dirs of a job behave as expected. """ for test in xrange(self.testNo): command = "scriptTreeTest_Wrapper2.py --jobTree %s --logLevel=INFO --retryCount=0" % self.jobTreeDir system(command) runJobTreeStatusAndFailIfNotComplete(self.jobTreeDir) def main(): parseSuiteTestOptions() sys.argv = sys.argv[:1] unittest.main() if __name__ == '__main__': main()