PACKAGE = R
VERSION = 3.3.1

abs_top_srcdir = /data/scratch/rwdavies/R-3.3.1
abs_top_builddir = /data/scratch/rwdavies/R-3.3.1

include $(top_srcdir)/share/make/vars.mk

AR = ar
ACLOCAL = aclocal
AUTOCONF = autoconf
AUTOMAKE = automake
AUTOHEADER = autoheader
BLAS_LIBS = -L$(R_HOME)/lib$(R_ARCH) -lRblas
BUILDDIR_IS_SRCDIR = yes
CC = gcc -std=gnu99
CFLAGS = -g -O2 
CPICFLAGS = -fpic
CPPFLAGS = -I/usr/local/include
CURL_CPPFLAGS = 
CURL_LIBS = -L/usr/lib/x86_64-linux-gnu -lcurl
## in case we want to link with this for UBSAN checks
CXX = g++
DEFS = -DHAVE_CONFIG_H 
DISTDIR_TAR_EXCLUDE = --exclude=.svn --exclude=Makefile --exclude="*.o" --exclude="*$(SHLIB_EXT)" --exclude="*~"
DYLIB_EXT = .so
DYLIB_LD = $(CC)
DYLIB_LDFLAGS = -shared -fopenmp# $(DYLIBS_LTO)
DYLIB_LINK = $(DYLIB_LD) $(DYLIB_LDFLAGS) $(LDFLAGS)
DYLIBS_LTO = $(CFLAGS) $(CPICFLAGS)
ECHO = echo
ECHO_C = 
ECHO_N = -n
ECHO_T = 
FFLAGS = -g -O2 
FLIBS =  -lgfortran -lm -lquadmath
FLIBS_IN_SO =  -lgfortran -lm -lquadmath
FPICFLAGS = -fpic
F77 = gfortran
GETWD = /bin/pwd
GZIP = --best
INSTALL = /usr/bin/install -c
INSTALL_DATA = ${INSTALL} -m 644
INSTALL_PROGRAM = ${INSTALL}
INSTALL_SCRIPT = ${INSTALL}
INSTALL_DIR = ${INSTALL} -d
LDFLAGS = -L/usr/local/lib
LIBINTL= 
LIBM = -lm
LIBR0 = 
LIBR1 = 
LIBR =  
## These are the libs which the final R.bin/libR is linked against.
## Many of these used to be optional: ICU libs still are.
## There may be platform-specific ones, e.g.
## -lrt -ldl on Linux, -lnsl -lsocket -lrt -lsunmath -ldl -liconv on Solaris.
LIBS =  -lpcre -llzma -lbz2 -lz -lrt -ldl -lm
LIBnn = lib
LIBTOOL = $(SHELL) $(top_builddir)/libtool
## AFAICS unused
LN_S = ln -s
MAIN_CFLAGS = 
MAIN_FFLAGS = 
MAIN_LD = $(CC)# $(CFLAGS)
MAIN_LDFLAGS = -Wl,--export-dynamic -fopenmp  # -Wl,-bE:$(top_builddir)/etc/R.exp
MAIN_LINK = $(MAIN_LD) $(MAIN_LDFLAGS) $(LIBR0) $(LDFLAGS)
## need this for bootstrapping
MKINSTALLDIRS = /bin/bash $(top_srcdir)/src/scripts/mkinstalldirs.in
NOTANGLE = false
R_ARCH = 
R_DYLIB_EXT = .so
R_FRAMEWORK_DIR = $(prefix)/R.framework
R_GZIPCMD = /bin/gzip
## needed for AIX only
# R_HOME = $(top_builddir)
R_OPENMP_CFLAGS = -fopenmp
## if ever used, need to check that this is compatible with C OpenMP
R_OPENMP_FFLAGS = -fopenmp
R_OSTYPE = unix
R_PKGS = $(R_PKGS_BASE)  $(R_PKGS_RECOMMENDED)
R_PLATFORM = x86_64-pc-linux-gnu
R_XTRA_CFLAGS =  
R_XTRA_CPPFLAGS =  -I. -I$(top_builddir)/src/include -I$(top_srcdir)/src/include
R_XTRA_FFLAGS = 
R_XTRA_LIBS = 
RANLIB = ranlib
READLINE_LIBS = -lreadline 
SED = /bin/sed
SHELL = /bin/bash
SHLIB_EXT = .so
SHLIB_CFLAGS = 
SHLIB_FFLAGS = 
SHLIB_LD = $(CC)
SHLIB_LDFLAGS = -shared# $(SHLIB_LTO)
SHLIB_LINK = $(SHLIB_LD) $(SHLIB_LDFLAGS) $(LIBR0) $(LDFLAGS)
SHLIB_LTO = $(CFLAGS) $(CPICFLAGS)
STRIP_LIBS = strip --strip-unneeded
STRIP_STATIC_LIBS = strip --strip-debug
TAR = /bin/tar
USE_NLS = yes
X_CFLAGS = 
X_LIBS =  -lX11 -lXt
X_PRE_LIBS =  -lSM -lICE
X_EXTRA_LIBS = 
YACC = yacc

ALL_CFLAGS = $(R_XTRA_CFLAGS) $(R_OPENMP_CFLAGS) $(MAIN_CFLAGS) $(CFLAGS)
ALL_CPPFLAGS = $(R_XTRA_CPPFLAGS) $(CPPFLAGS) $(DEFS)
## R_OPENMP_FFLAGS should not really be here: see above
ALL_FFLAGS = $(R_XTRA_FFLAGS) $(R_OPENMP_FFLAGS) $(MAIN_FFLAGS) $(FFLAGS)
ALL_CFLAGS_LO = $(R_XTRA_CFLAGS) $(R_OPENMP_CFLAGS) $(CPICFLAGS) $(SHLIB_CFLAGS) $(CFLAGS)
ALL_FFLAGS_LO = $(R_XTRA_FFLAGS) $(R_OPENMP_FFLAGS) $(FPICFLAGS) $(SHLIB_FFLAGS) $(FFLAGS)

.SUFFIXES:
.SUFFIXES: .c .f .m .d .o

.c.o:
	$(CC) $(ALL_CPPFLAGS) $(ALL_CFLAGS) -c $< -o $@
.c.d:
	@echo "making $@ from $<"
	@$(CC) -MM $(ALL_CPPFLAGS) $< > $@
.m.d:
	@echo > $@
.f.o:
	$(F77) $(ALL_FFLAGS) -c $< -o $@

prefix = /usr/local
exec_prefix = ${prefix}
datarootdir = ${prefix}/share
## only used for installing 'R'.
bindir = ${exec_prefix}/bin
## not used
datadir = ${datarootdir}
## used for 'rhome' and installation of standalone Rmath
libdir = ${exec_prefix}/${LIBnn}
## used for man page
mandir = ${datarootdir}/man
## used for installation of standalone Rmath headers
includedir = ${prefix}/include

rhome = ${libdir}/R
rsharedir = ${rhome}/share
rincludedir = ${rhome}/include
rdocdir = ${rhome}/doc

## Overrides for installing R as a framework (MacOS X).
#FW_VERSION = 
#rhome = $(R_FRAMEWORK_DIR)/Versions/$(FW_VERSION)/Resources
#bindir = $(rhome)
#mandir = $(rhome)

Rexecbindir = $(rhome)/bin
Rexecbindir2 = $(rhome)/bin/exec$(R_ARCH)
Rexeclibdir = $(rhome)/lib$(R_ARCH)
## FIXME:
## Alternatively, we could try to set pkglibdir = $(rhome)/lib when
## switching to automake.
## </FIXME>
Rexecmodulesdir = $(rhome)/modules$(R_ARCH)