Position chr bp.1 snp logP.interval logP.merge logP.partial sdp entropy Chr Gene dbSNP Ref X129P2_OlaHsd Csq X129S1_SvImJ Csq.1 X129S5SvEvBrd Csq.2 A_J Csq.3 AKR_J Csq.4 BALB_cJ Csq.5 BUB_BnJ Csq.6 C3H_HeJ Csq.7 C57BL_10J Csq.8 C57BL_6NJ Csq.9 C57BR_cdJ Csq.10 C58_J Csq.11 CAST_EiJ Csq.12 CBA_J Csq.13 DBA_1J Csq.14 DBA_2J Csq.15 FVB_NJ Csq.16 I_LnJ Csq.17 LP_J Csq.18 MOLF_EiJ Csq.19 NOD_ShiLtJ Csq.20 NZB_B1NJ Csq.21 NZO_HlLtJ Csq.22 NZW_LacJ Csq.23 PWK_PhJ Csq.24 SEA_GnJ Csq.25 SPRET_EiJ Csq.26 WSB_EiJ Csq.27 121989118 2 121989118 UNC020320268 4.10456126931197 0.278555261458615 4.36420124684545 1.1.1.2.1.1.1.1 -1.26991780834355 2 Ctdspl2 rs29811372 T C* non_coding_exon_variant nc_transcript_variant C* non_coding_exon_variant nc_transcript_variant C* non_coding_exon_variant nc_transcript_variant C* non_coding_exon_variant nc_transcript_variant C* non_coding_exon_variant nc_transcript_variant C* non_coding_exon_variant nc_transcript_variant C* non_coding_exon_variant nc_transcript_variant C* non_coding_exon_variant nc_transcript_variant - - - - - - C* non_coding_exon_variant nc_transcript_variant - - C* non_coding_exon_variant nc_transcript_variant C* non_coding_exon_variant nc_transcript_variant C* non_coding_exon_variant nc_transcript_variant C* non_coding_exon_variant nc_transcript_variant C* non_coding_exon_variant nc_transcript_variant C* non_coding_exon_variant nc_transcript_variant - - C* non_coding_exon_variant nc_transcript_variant C* non_coding_exon_variant nc_transcript_variant C* non_coding_exon_variant nc_transcript_variant C* non_coding_exon_variant nc_transcript_variant - - C* non_coding_exon_variant nc_transcript_variant C* non_coding_exon_variant nc_transcript_variant C* non_coding_exon_variant nc_transcript_variant 121992962 2 121992962 UNC020320268 4.10456126931197 1.29920805622209 4.13414806216599 1.1.2.1.1.1.1.1 -1.17974315897817 2 Ctdspl2 rs264320894 T - - - - - - - - - - - - - - - - - - - - - - - - C* nc_transcript_variant downstream_gene_variant - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 121993069 2 121993069 UNC020320268 4.10456126931197 0.086797603534369 4.38504225961946 1.2.1.1.1.2.2.1 -1.17636037260851 2 Ctdspl2 rs49238809 G A* nc_transcript_variant downstream_gene_variant A* nc_transcript_variant downstream_gene_variant A* nc_transcript_variant downstream_gene_variant A* nc_transcript_variant downstream_gene_variant A* nc_transcript_variant downstream_gene_variant A* nc_transcript_variant downstream_gene_variant A* nc_transcript_variant downstream_gene_variant A* nc_transcript_variant downstream_gene_variant - - - - - - A* nc_transcript_variant downstream_gene_variant - - A* nc_transcript_variant downstream_gene_variant A* nc_transcript_variant downstream_gene_variant A* nc_transcript_variant downstream_gene_variant A* nc_transcript_variant downstream_gene_variant A* nc_transcript_variant downstream_gene_variant A* nc_transcript_variant downstream_gene_variant - - A* nc_transcript_variant downstream_gene_variant A* nc_transcript_variant downstream_gene_variant A* nc_transcript_variant downstream_gene_variant A* nc_transcript_variant downstream_gene_variant - - A* nc_transcript_variant downstream_gene_variant A* nc_transcript_variant downstream_gene_variant A* nc_transcript_variant downstream_gene_variant 121993281 2 121993281 UNC020320268 4.10456126931197 1.27897487197597 4.13992026623312 1.2.1.1.1.1.2.1 -1.28940301246153 2 Ctdspl2 rs222475058 A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G* nc_transcript_variant downstream_gene_variant - - 121995037 2 121995037 UNC020320268 4.10456126931197 0.410818616365857 4.34326267374862 1.1.2.2.1.1.1.2 -1.04368826672243 2 Ctdspl2 rs228759405 C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T* nc_transcript_variant downstream_gene_variant - - 121998651 2 121998651 UNC020320268 4.10456126931197 0.278555261458615 4.36420124684545 1.1.1.2.1.1.1.1 -1.26991780834355 2 Ctdspl2 rs243298817 T - - - - ~ - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - C* nc_transcript_variant downstream_gene_variant - - - - - - - - - - - - - - 121998652 2 121998652 UNC020320268 4.10456126931197 0.278555261458615 4.36420124684545 1.1.1.2.1.1.1.1 -1.26991780834355 2 Ctdspl2 rs45634552 A G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant g* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant - - - - - - G* nc_transcript_variant downstream_gene_variant - - G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant - - G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant - - G* nc_transcript_variant downstream_gene_variant - - G* nc_transcript_variant downstream_gene_variant 121999265 2 121999265 UNC020320268 4.10456126931197 1.29920805622209 4.13414806216599 1.1.2.1.1.1.1.1 -1.17974315897817 2 Ctdspl2 rs3720009 T A nc_transcript_variant A nc_transcript_variant A nc_transcript_variant - - A nc_transcript_variant - - A nc_transcript_variant - - - - - - - - - - - - - - - - - - A nc_transcript_variant - - A nc_transcript_variant - - A nc_transcript_variant - - - - A nc_transcript_variant - - - - - - A nc_transcript_variant 122016512 2 122016512 UNC020320268 4.10456126931197 2.70449605467257 3.62098569000825 1.1.1.1.1.2.2.1 -1.25024653366326 2 Ctdspl2 - G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A downstream_gene_variant - - 122024634 2 122024634 UNC020320268 4.10456126931197 0.086797603534369 4.38504225961946 1.2.1.1.1.2.2.1 -1.17636037260851 2 Eif3j1 rs233539492 T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A upstream_gene_variant - - 122025037 2 122025037 UNC020320268 4.10456126931197 1.27897487197597 4.13992026623312 1.2.1.1.1.1.2.1 -1.28940301246153 2 Eif3j1 rs3726142 G A upstream_gene_variant A upstream_gene_variant A upstream_gene_variant - - A upstream_gene_variant - - A upstream_gene_variant - - - - - - - - - - - - - - - - - - A upstream_gene_variant - - A upstream_gene_variant - - - - - - - - A upstream_gene_variant - - - - - - A upstream_gene_variant 122027050 2 122027050 UNC020320268 4.10456126931197 1.27897487197597 4.13992026623312 1.2.1.1.1.1.2.1 -1.28940301246153 2 Eif3j1 rs240867020 T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - C upstream_gene_variant - - 122027804 2 122027804 UNC020320268 4.10456126931197 0.086797603534369 4.38504225961946 1.2.1.1.1.2.2.1 -1.17636037260851 2 Eif3j1 rs50616669 T C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant - - - - - - C upstream_gene_variant - - C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant - - C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant - - C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant 122031494 2 122031494 UNC020320268 4.10456126931197 2.60121062045439 3.66704429115244 1.1.1.1.1.2.1.1 -1.25332035912545 2 Eif3j1 rs238125005 T - - - - - - - - - - - - - - - - - - - - - - - - G downstream_gene_variant - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 122050957 2 122050957 UNC020320268 4.10456126931197 1.27897487197597 4.13992026623312 1.2.1.1.1.1.2.1 -1.28940301246153 2 Spg11 rs222969930 C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T downstream_gene_variant - - 122089356 2 122089356 UNC020320268 4.10456126931197 2.60121062045439 3.66704429115244 1.1.1.1.1.2.1.1 -1.25332035912545 2 Spg11 rs33207557 C - - - - - - A downstream_gene_variant - - A downstream_gene_variant - - A downstream_gene_variant - - - - - - A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant - - A downstream_gene_variant - - - - - - A downstream_gene_variant A downstream_gene_variant - - - - A downstream_gene_variant A downstream_gene_variant - - 122092309 2 122092309 UNC020320268 4.10456126931197 2.60121062045439 3.66704429115244 1.1.1.1.1.2.1.1 -1.25332035912545 2 Spg11 rs27425830 G C* missense_variant downstream_gene_variant C* missense_variant downstream_gene_variant C* missense_variant downstream_gene_variant - - C* missense_variant downstream_gene_variant - - C* missense_variant downstream_gene_variant - - - - - - - - - - C* missense_variant downstream_gene_variant - - - - - - C* missense_variant downstream_gene_variant - - C* missense_variant downstream_gene_variant - - - - - - - - C* missense_variant downstream_gene_variant - - - - C* missense_variant downstream_gene_variant C* missense_variant downstream_gene_variant 122093721 2 122093721 UNC020320268 4.10456126931197 2.60121062045439 3.66704429115244 1.1.1.1.1.2.1.1 -1.25332035912545 2 Spg11 rs3686326 T - - - - - - C nc_transcript_variant - - C nc_transcript_variant - - C nc_transcript_variant - - - - - - C nc_transcript_variant - - C nc_transcript_variant C nc_transcript_variant C nc_transcript_variant - - C nc_transcript_variant - - - - - - C nc_transcript_variant C nc_transcript_variant - - - - C nc_transcript_variant - - - - 122095173 2 122095173 UNC020320268 4.10456126931197 2.60121062045439 3.66704429115244 1.1.1.1.1.2.1.1 -1.25332035912545 2 Spg11 rs233336429 A a/g nc_transcript_variant a/g nc_transcript_variant a/g nc_transcript_variant - - a/g nc_transcript_variant - - a/g nc_transcript_variant - - - - - - - - - - G nc_transcript_variant - - - - - - a/g nc_transcript_variant - - a/g nc_transcript_variant - - a/g nc_transcript_variant - - - - a/g nc_transcript_variant - - - - ~ - a/g nc_transcript_variant 122097168 2 122097168 UNC020320268 4.10456126931197 0.495279326972596 4.32799031645039 1.2.1.1.2.2.2.2 -1.0647301157941 2 Spg11 rs240387389 C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T nc_transcript_variant - - 122097244 2 122097244 UNC020320268 4.10456126931197 1.27897487197597 4.13992026623312 1.2.1.1.1.1.2.1 -1.28940301246153 2 Spg11 rs221448820 G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A nc_transcript_variant - - 122098797 2 122098797 UNC020320268 4.10456126931197 2.60121062045439 3.66704429115244 1.1.1.1.1.2.1.1 -1.25332035912545 2 Spg11 rs48748908 G A nc_transcript_variant A nc_transcript_variant A nc_transcript_variant - - A nc_transcript_variant - - A nc_transcript_variant - - - - - - - - - - - - - - - - - - A nc_transcript_variant - - A nc_transcript_variant - - - - - - - - A nc_transcript_variant - - - - - - A nc_transcript_variant 122102012 2 122102012 UNC020320268 4.10456126931197 2.60121062045439 3.66704429115244 1.1.1.1.1.2.1.1 -1.25332035912545 2 Spg11 rs235160284 A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - C nc_transcript_variant - - 122105804 2 122105804 UNC020320268 4.10456126931197 2.60121062045439 3.66704429115244 1.1.1.1.1.2.1.1 -1.25332035912545 2 Spg11 rs27425791 A - - - - ~ - G* nc_transcript_variant downstream_gene_variant - - G* nc_transcript_variant downstream_gene_variant - - G* nc_transcript_variant downstream_gene_variant - - - - - - G* nc_transcript_variant downstream_gene_variant - - G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant - - G* nc_transcript_variant downstream_gene_variant - - - - - - G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant - - - - G* nc_transcript_variant downstream_gene_variant - - - - 122105852 2 122105852 UNC020320268 4.10456126931197 2.60121062045439 3.66704429115244 1.1.1.1.1.2.1.1 -1.25332035912545 2 Spg11 - G - - - - - - ~ - - - A* nc_transcript_variant downstream_gene_variant - - a* nc_transcript_variant downstream_gene_variant - - - - - - ~ - - - ~ - - - ~ - - - a* nc_transcript_variant downstream_gene_variant - - - - - - ~ - ~ - - - - - ~ - A* nc_transcript_variant downstream_gene_variant - - 122106970 2 122106970 UNC020320268 4.10456126931197 2.60121062045439 3.66704429115244 1.1.1.1.1.2.1.1 -1.25332035912545 2 Spg11 rs51115044 A G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant - - - - - - G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant - - G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant - - G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant G* nc_transcript_variant downstream_gene_variant 122111752 2 122111752 UNC020320268 4.10456126931197 1.27897487197597 4.13992026623312 1.2.1.1.1.1.2.1 -1.28940301246153 2 Spg11 rs215122494 C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T* missense_variant non_coding_exon_variant nc_transcript_variant - - 122115199 2 122115199 UNC020320268 4.10456126931197 2.60121062045439 3.66704429115244 1.1.1.1.1.2.1.1 -1.25332035912545 2 Spg11 rs262345850 C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T* nc_transcript_variant downstream_gene_variant - - 122117400 2 122117400 JAX00501695 4.04672932911592 2.56304575876026 3.61583131267041 1.1.1.1.1.2.1.1 -1.25714332971207 2 Spg11 - T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - C* nc_transcript_variant downstream_gene_variant - - 122124662 2 122124662 JAX00501695 4.04672932911592 1.27435784321968 4.07936390244985 1.2.1.1.1.1.2.1 -1.28870773870321 2 Patl2 rs27425763 T C missense_variant C missense_variant C missense_variant C missense_variant C missense_variant C missense_variant C missense_variant C missense_variant - - - - - - C missense_variant - - C missense_variant C missense_variant C missense_variant C missense_variant C missense_variant C missense_variant - - C missense_variant C missense_variant C missense_variant C missense_variant - - C missense_variant - - C missense_variant 122126178 2 122126178 JAX00501695 4.04672932911592 0.410130974098805 4.28400849782635 1.1.2.2.1.1.1.2 -1.04415114509629 2 Patl2 rs27425750 C - - - - - - - - - - - - - - - - - - - - - - - - T synonymous_variant - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 122154978 2 122154978 JAX00501695 4.04672932911592 2.07554479731591 3.8142616586074 1.2.2.2.1.1.2.2 -1.03717698719159 2 ENSMUSG00000060802 rs32882156 T A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant - - - - - - A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant - - A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant - - A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant 122154982 2 122154982 JAX00501695 4.04672932911592 2.07554479731591 3.8142616586074 1.2.2.2.1.1.2.2 -1.03717698719159 2 ENSMUSG00000060802 - T - - - - - - - - - - - - - - - - - - - - - - - - C downstream_gene_variant - - - - - - - - - - - - - - - - - - - - - - - - - - C downstream_gene_variant - - 122155208 2 122155208 JAX00501695 4.04672932911592 2.07554479731591 3.8142616586074 1.2.2.2.1.1.2.2 -1.03717698719159 2 ENSMUSG00000060802 rs229442298 C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T downstream_gene_variant - - 122158239 2 122158239 JAX00501695 4.04672932911592 2.07554479731591 3.8142616586074 1.2.2.2.1.1.2.2 -1.03717698719159 2 ENSMUSG00000033368 rs48871660 A G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant - - - - - - G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant - - G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant - - G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant 122158381 2 122158381 JAX00501695 4.04672932911592 0.788231375458886 4.20608389033965 1.2.2.2.1.2.2.2 -1.08764793991209 2 ENSMUSG00000033368 rs46045517 A G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant - - - - - - G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant - - G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant - - G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant 122159577 2 122159577 JAX00501695 4.04672932911592 2.56304575876026 3.61583131267041 1.1.1.1.1.2.1.1 -1.25714332971207 2 ENSMUSG00000033368 rs253590221 A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G upstream_gene_variant - - 122161002 2 122161002 JAX00501695 4.04672932911592 0.410130974098805 4.28400849782635 1.1.2.2.1.1.1.2 -1.04415114509629 2 ENSMUSG00000033368 rs239774339 C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G nc_transcript_variant - - 122172593 2 122172593 JAX00501695 4.04672932911592 0.410130974098805 4.28400849782635 1.1.2.2.1.1.1.2 -1.04415114509629 2 ENSMUSG00000033368 - G - - - - - - A nc_transcript_variant - - A nc_transcript_variant - - A nc_transcript_variant - - - - - - a nc_transcript_variant ~ - A nc_transcript_variant a nc_transcript_variant A nc_transcript_variant ~ - a nc_transcript_variant - - - - - - A nc_transcript_variant a nc_transcript_variant - - - - A nc_transcript_variant ~ - - - 122174663 2 122174663 JAX00501695 4.04672932911592 0.788231375458886 4.20608389033965 1.2.2.2.1.2.2.2 -1.08764793991209 2 ENSMUSG00000033368 rs46312541 G - - - - - - C nc_transcript_variant - - C nc_transcript_variant - - C nc_transcript_variant - - - - - - C nc_transcript_variant C nc_transcript_variant C nc_transcript_variant C nc_transcript_variant C nc_transcript_variant - - C nc_transcript_variant - - - - - - C nc_transcript_variant C nc_transcript_variant - - - - C nc_transcript_variant - - - - 122188660 2 122188660 JAX00501695 4.04672932911592 0.788231375458886 4.20608389033965 1.2.2.2.1.2.2.2 -1.08764793991209 2 4933406J08Rik rs27425603 T - - - - - - G* nc_transcript_variant upstream_gene_variant - - G* nc_transcript_variant upstream_gene_variant - - G* nc_transcript_variant upstream_gene_variant - - - - - - G* nc_transcript_variant upstream_gene_variant - 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- - - - - A upstream_gene_variant - - A upstream_gene_variant - - A upstream_gene_variant - - - - - - A upstream_gene_variant - - A upstream_gene_variant A upstream_gene_variant A upstream_gene_variant - - A upstream_gene_variant - - - - - - A upstream_gene_variant A upstream_gene_variant - - - - A upstream_gene_variant - - - - 122220765 2 122220765 JAX00501695 4.04672932911592 0.788231375458886 4.20608389033965 1.2.2.2.1.2.2.2 -1.08764793991209 2 Rps12-ps10 rs233876306 G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A downstream_gene_variant - - 122232180 2 122232180 JAX00501695 4.04672932911592 0.818623711371738 4.19895441914686 1.2.2.2.1.2.1.2 -1.08647640343602 2 Sord rs231365721 C - - - - - - - - - - - - - - - - - - - - - - - - T upstream_gene_variant - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 122295897 2 122295897 UNC3871206 2.47972190297093 1.94872875932591 2.07487945363196 1.1.1.1.1.2.1.1 -1.27547819784162 2 Duoxa2 rs237335291 G - 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- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A* splice_region_variant nc_transcript_variant downstream_gene_variant - - 122312684 2 122312684 UNC3871206 2.47972190297093 1.94872875932591 2.07487945363196 1.1.1.1.1.2.1.1 -1.27547819784162 2 Duox1 rs261137878 C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T upstream_gene_variant - - 122314360 2 122314360 UNC3871206 2.47972190297093 0.0300237464148515 2.72490704757541 1.1.2.1.1.1.1.2 -1.04349609260117 2 Duox1 rs27453281 T G upstream_gene_variant G upstream_gene_variant G upstream_gene_variant - - - - - - G upstream_gene_variant - - - - - - - - - - - - - - - - - - G upstream_gene_variant - - G upstream_gene_variant - - G upstream_gene_variant - - - - G upstream_gene_variant - - - - - - G upstream_gene_variant 122315847 2 122315847 UNC3871206 2.47972190297093 1.94872875932591 2.07487945363196 1.1.1.1.1.2.1.1 -1.27547819784162 2 Duoxa1 rs247632288 A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G upstream_gene_variant - - - - - - 122324109 2 122324109 UNC3871206 2.47972190297093 1.27672868666895 2.3791757205125 1.1.1.1.1.1.1.2 -1.13531315562323 2 Duox1 rs27453264 C - - - - - - - - - - - - - - - - - - - - - - - - T synonymous_variant - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 122337384 2 122337384 UNC3871206 2.47972190297093 1.00328292846614 2.48274238466931 1.2.1.1.1.1.2.1 -1.288639093798 2 Duox1 rs27453205 G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A synonymous_variant - - - - - - 122348055 2 122348055 UNC3871206 2.47972190297093 0.405475601693566 2.66435207809952 1.1.2.1.1.2.1.2 -1.05480874812275 2 Duox1 rs245208351 C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T downstream_gene_variant - - 122348396 2 122348396 UNC3871206 2.47972190297093 1.00328292846614 2.48274238466931 1.2.1.1.1.1.2.1 -1.288639093798 2 Duox1 rs242972313 G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A downstream_gene_variant - - 122352870 2 122352870 UNC3871206 2.47972190297093 0.00344500983735848 2.72547479711548 1.2.1.1.2.1.2.2 -1.03710380034235 2 Shf rs226850302 C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T* nc_transcript_variant downstream_gene_variant - - 122352890 2 122352890 UNC3871206 2.47972190297093 4.03410195165082 0.575887303011746 1.1.1.1.1.1.2.1 -1.37950986556722 2 Shf rs261948859 C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T* nc_transcript_variant downstream_gene_variant - - 122357228 2 122357228 UNC3871206 2.47972190297093 1.00328292846614 2.48274238466931 1.2.1.1.1.1.2.1 -1.288639093798 2 Shf rs217949445 C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T* synonymous_variant upstream_gene_variant - 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- - - - - - - - - - - - - - - - - - - - - - - t/g downstream_gene_variant - - - - - - - - - - - - - - - - - - - - - - G downstream_gene_variant - - g downstream_gene_variant - - 122491689 2 122491689 UNC3871206 2.47972190297093 1.94872875932591 2.07487945363196 1.1.1.1.1.2.1.1 -1.27547819784162 2 Gm14085 - A - - - - - - - - - - - - - - - - - - - - - - - - C downstream_gene_variant - - - - - - - - - - - - - - - - - - - - - - - - - - ~ - - - 122491823 2 122491823 UNC3871206 2.47972190297093 1.00328292846614 2.48274238466931 1.2.1.1.1.1.2.1 -1.288639093798 2 Gm14085 rs27438251 T ~ - ~ - ~ - ~ - ~ - ~ - ~ - ~ - - - - - - - ~ - C downstream_gene_variant ~ - ~ - ~ - ~ - ~ - ~ - - - ~ - ~ - ~ - ~ - - - ~ - ~ - ~ - 122590106 2 122590106 JAX00099502 2.26132931914389 0.977341642141455 2.25621506031377 1.2.1.1.1.1.1.1 -1.29280057767335 2 Gatm rs50398821 T C downstream_gene_variant C downstream_gene_variant C downstream_gene_variant C downstream_gene_variant C downstream_gene_variant C downstream_gene_variant C downstream_gene_variant C downstream_gene_variant - - - - - - C downstream_gene_variant C downstream_gene_variant C downstream_gene_variant C downstream_gene_variant C downstream_gene_variant C downstream_gene_variant C downstream_gene_variant C downstream_gene_variant - - C downstream_gene_variant C downstream_gene_variant C downstream_gene_variant C downstream_gene_variant - - C downstream_gene_variant C downstream_gene_variant C downstream_gene_variant 122590300 2 122590300 JAX00099502 2.26132931914389 3.49110714200553 0.769721548274338 1.1.1.1.1.1.2.1 -1.37981214492162 2 Gatm rs225920640 C - - - - T downstream_gene_variant - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 122592115 2 122592115 JAX00099502 2.26132931914389 0.967589549274588 2.25980108176047 1.2.1.1.1.1.2.1 -1.28810895511242 2 Gatm rs252979416 C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T downstream_gene_variant - - 122592549 2 122592549 JAX00099502 2.26132931914389 1.92354863221359 1.83424778163263 1.2.2.2.2.2.2.2 -1.19061139971311 2 Gatm rs224974526 G - 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- - - - - C nc_transcript_variant C nc_transcript_variant C nc_transcript_variant C nc_transcript_variant C nc_transcript_variant C nc_transcript_variant C nc_transcript_variant C nc_transcript_variant - - C nc_transcript_variant C nc_transcript_variant C nc_transcript_variant C nc_transcript_variant - - C nc_transcript_variant C nc_transcript_variant C nc_transcript_variant 122602992 2 122602992 JAX00099502 2.26132931914389 0.0917061934289006 2.49488397925704 1.2.1.1.1.2.2.1 -1.18282738537816 2 Gatm rs27422750 G A upstream_gene_variant A upstream_gene_variant A upstream_gene_variant A upstream_gene_variant A upstream_gene_variant A upstream_gene_variant A upstream_gene_variant A upstream_gene_variant - - - - - - A upstream_gene_variant A upstream_gene_variant A upstream_gene_variant A upstream_gene_variant A upstream_gene_variant A upstream_gene_variant A upstream_gene_variant A upstream_gene_variant - - A upstream_gene_variant A upstream_gene_variant A upstream_gene_variant A upstream_gene_variant - 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- - - - - A* upstream_gene_variant downstream_gene_variant A* upstream_gene_variant downstream_gene_variant A* upstream_gene_variant downstream_gene_variant A* upstream_gene_variant downstream_gene_variant A* upstream_gene_variant downstream_gene_variant A* upstream_gene_variant downstream_gene_variant A* upstream_gene_variant downstream_gene_variant A* upstream_gene_variant downstream_gene_variant - - A* upstream_gene_variant downstream_gene_variant A* upstream_gene_variant downstream_gene_variant A* upstream_gene_variant downstream_gene_variant A* upstream_gene_variant downstream_gene_variant - - A* upstream_gene_variant downstream_gene_variant A* upstream_gene_variant downstream_gene_variant A* upstream_gene_variant downstream_gene_variant 122635445 2 122635445 JAX00099509 1.84145609419708 1.78629056790468 1.42148122960898 1.2.2.2.2.2.2.2 -1.19085443561814 2 AA467197 rs51377500 C T* upstream_gene_variant downstream_gene_variant T* upstream_gene_variant downstream_gene_variant T* upstream_gene_variant downstream_gene_variant T* upstream_gene_variant downstream_gene_variant T* upstream_gene_variant downstream_gene_variant T* upstream_gene_variant downstream_gene_variant T* upstream_gene_variant downstream_gene_variant T* upstream_gene_variant downstream_gene_variant - - - - - - T* upstream_gene_variant downstream_gene_variant T* upstream_gene_variant downstream_gene_variant T* upstream_gene_variant downstream_gene_variant T* upstream_gene_variant downstream_gene_variant T* upstream_gene_variant downstream_gene_variant T* upstream_gene_variant downstream_gene_variant T* upstream_gene_variant downstream_gene_variant T* upstream_gene_variant downstream_gene_variant - - T* upstream_gene_variant downstream_gene_variant T* upstream_gene_variant downstream_gene_variant T* upstream_gene_variant downstream_gene_variant T* upstream_gene_variant downstream_gene_variant - - T* upstream_gene_variant downstream_gene_variant T* upstream_gene_variant downstream_gene_variant T* upstream_gene_variant downstream_gene_variant 122637778 2 122637778 JAX00099509 1.84145609419708 0.0921501416592222 2.05833910779453 1.2.1.1.1.2.1.1 -1.18505970458103 2 AA467197 rs256410706 T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - C* upstream_gene_variant downstream_gene_variant - - 122639287 2 122639287 JAX00099509 1.84145609419708 0.90816812408345 1.82757175026371 1.2.1.1.1.1.1.1 -1.29248602214495 2 AA467197 rs50255398 C A* nc_transcript_variant upstream_gene_variant A* nc_transcript_variant upstream_gene_variant A* nc_transcript_variant upstream_gene_variant A* nc_transcript_variant upstream_gene_variant A* nc_transcript_variant upstream_gene_variant A* nc_transcript_variant upstream_gene_variant A* nc_transcript_variant upstream_gene_variant A* nc_transcript_variant upstream_gene_variant - - - - - - A* nc_transcript_variant upstream_gene_variant - - A* nc_transcript_variant upstream_gene_variant A* nc_transcript_variant upstream_gene_variant A* nc_transcript_variant upstream_gene_variant A* nc_transcript_variant upstream_gene_variant A* nc_transcript_variant upstream_gene_variant A* nc_transcript_variant upstream_gene_variant - - A* nc_transcript_variant upstream_gene_variant A* nc_transcript_variant upstream_gene_variant A* nc_transcript_variant upstream_gene_variant A* nc_transcript_variant upstream_gene_variant - - A* nc_transcript_variant upstream_gene_variant ~ - A* nc_transcript_variant upstream_gene_variant 122639865 2 122639865 JAX00099509 1.84145609419708 0.0921501416592222 2.05833910779453 1.2.1.1.1.2.1.1 -1.18505970458103 2 AA467197 rs259470054 C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T* nc_transcript_variant upstream_gene_variant - - 122640594 2 122640594 JAX00099509 1.84145609419708 2.63183333981942 0.901220207974629 1.1.1.1.1.1.2.1 -1.37981329605133 2 AA467197 rs242035750 A - - - - - - - - - - - - - - - - - - - - - - - - T* nc_transcript_variant upstream_gene_variant - - - - - - - - - - - - - - - - - - - - - - - - - - ~ - - - 122676946 2 122676946 JAX00099509 1.84145609419708 0.899704340077034 1.8308274017609 1.2.1.1.1.1.2.1 -1.28738148210608 2 Slc30a4 rs250785171 A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G downstream_gene_variant - - 122677170 2 122677170 JAX00099509 1.84145609419708 0.899704340077034 1.8308274017609 1.2.1.1.1.1.2.1 -1.28738148210608 2 Slc30a4 rs29539129 A G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant - - - - - - G downstream_gene_variant - - G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant - - G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant - - G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant 122679324 2 122679324 JAX00099509 1.84145609419708 0.0921501416592222 2.05833910779453 1.2.1.1.1.2.1.1 -1.18505970458103 2 Slc30a4 rs215341737 A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G downstream_gene_variant - - 122679649 2 122679649 JAX00099509 1.84145609419708 1.73357277406615 1.44963604586057 1.1.1.1.1.2.1.1 -1.27754947236893 2 Slc30a4 - G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A downstream_gene_variant - - 122683155 2 122683155 JAX00099509 1.84145609419708 1.78629056790468 1.42148122960898 1.2.2.2.2.2.2.2 -1.19085443561814 2 Slc30a4 rs27468248 T - - - - - - - - - - - - - - - - - - - - - - - - G* 3_prime_utr_variant downstream_gene_variant - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 122711563 2 122711563 JAX00099509 1.84145609419708 0.982509709308845 1.79841007224413 1.2.2.1.1.2.2.1 -1.0415476056376 2 4930417H01Rik rs227946913 A - - - - - - - - - - - - - - - - - - - - - - - - G nc_transcript_variant - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 122714543 2 122714543 JAX00099509 1.84145609419708 0.899704340077034 1.8308274017609 1.2.1.1.1.1.2.1 -1.28738148210608 2 4930417H01Rik rs27468210 A G nc_transcript_variant G nc_transcript_variant G nc_transcript_variant G nc_transcript_variant G nc_transcript_variant G nc_transcript_variant G nc_transcript_variant G nc_transcript_variant - - - - - - G nc_transcript_variant - - G nc_transcript_variant G nc_transcript_variant G nc_transcript_variant G nc_transcript_variant G nc_transcript_variant G nc_transcript_variant - - G nc_transcript_variant G nc_transcript_variant G nc_transcript_variant G nc_transcript_variant - - G nc_transcript_variant - - G nc_transcript_variant 122724061 2 122724061 JAX00099509 1.84145609419708 1.73357277406615 1.44963604586057 1.1.1.1.1.2.1.1 -1.27754947236893 2 4930417H01Rik rs6297698 C T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant - - - - - - T downstream_gene_variant - - T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant - - T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant 122725003 2 122725003 JAX00099509 1.84145609419708 0.0250122429478448 2.06330112244209 1.1.2.1.1.1.1.2 -1.04380511325628 2 4930417H01Rik rs245314524 A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G downstream_gene_variant - - 122729074 2 122729074 JAX00099509 1.84145609419708 0.0875452214103009 2.05882607450599 1.2.1.1.1.2.2.1 -1.18318083779042 2 4930580A09Rik rs245562770 T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - C downstream_gene_variant - - 122729793 2 122729793 JAX00099509 1.84145609419708 0.899704340077034 1.8308274017609 1.2.1.1.1.1.2.1 -1.28738148210608 2 4930580A09Rik rs223304904 G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A downstream_gene_variant - - 122732621 2 122732621 JAX00099509 1.84145609419708 0.28243455566858 2.02537990925329 1.2.1.2.1.2.2.1 -1.15049620565879 2 4930580A09Rik rs221357905 C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G downstream_gene_variant - - 122739697 2 122739697 JAX00099509 1.84145609419708 1.73357277406615 1.44963604586057 1.1.1.1.1.2.1.1 -1.27754947236893 2 Bloc1s6 rs264501103 A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T* nc_transcript_variant upstream_gene_variant downstream_gene_variant - - 122742132 2 122742132 JAX00099509 1.84145609419708 1.73357277406615 1.44963604586057 1.1.1.1.1.2.1.1 -1.27754947236893 2 Bloc1s6 rs47209817 T C* nc_transcript_variant upstream_gene_variant downstream_gene_variant C* nc_transcript_variant upstream_gene_variant downstream_gene_variant C* nc_transcript_variant upstream_gene_variant downstream_gene_variant C* nc_transcript_variant upstream_gene_variant downstream_gene_variant C* nc_transcript_variant upstream_gene_variant downstream_gene_variant C* nc_transcript_variant upstream_gene_variant downstream_gene_variant C* nc_transcript_variant upstream_gene_variant downstream_gene_variant C* nc_transcript_variant upstream_gene_variant downstream_gene_variant - - - - - - C* nc_transcript_variant upstream_gene_variant downstream_gene_variant - - C* nc_transcript_variant upstream_gene_variant downstream_gene_variant C* nc_transcript_variant upstream_gene_variant downstream_gene_variant C* nc_transcript_variant upstream_gene_variant downstream_gene_variant C* nc_transcript_variant upstream_gene_variant downstream_gene_variant C* nc_transcript_variant upstream_gene_variant downstream_gene_variant C* nc_transcript_variant upstream_gene_variant downstream_gene_variant - - C* nc_transcript_variant upstream_gene_variant downstream_gene_variant C* nc_transcript_variant upstream_gene_variant downstream_gene_variant C* nc_transcript_variant upstream_gene_variant downstream_gene_variant C* nc_transcript_variant upstream_gene_variant downstream_gene_variant - - C* nc_transcript_variant upstream_gene_variant downstream_gene_variant - - C* nc_transcript_variant upstream_gene_variant downstream_gene_variant 122743257 2 122743257 JAX00099509 1.84145609419708 0.28243455566858 2.02537990925329 1.2.1.2.1.2.2.1 -1.15049620565879 2 Bloc1s6 rs248131962 G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A* nc_transcript_variant upstream_gene_variant downstream_gene_variant - - 122743374 2 122743374 JAX00099509 1.84145609419708 0.899704340077034 1.8308274017609 1.2.1.1.1.1.2.1 -1.28738148210608 2 Bloc1s6 rs244906467 G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T* nc_transcript_variant downstream_gene_variant - - 122746678 2 122746678 JAX00099509 1.84145609419708 1.73357277406615 1.44963604586057 1.1.1.1.1.2.1.1 -1.27754947236893 2 Bloc1s6 rs234589100 T - - - - - - - - - - - - - - - - - - - - - - - - G* 3_prime_utr_variant non_coding_exon_variant nc_transcript_variant downstream_gene_variant - - - - - - - - - - - - - - - - - - - - - - - - - - G* 3_prime_utr_variant non_coding_exon_variant nc_transcript_variant downstream_gene_variant - - 122747273 2 122747273 JAX00099509 1.84145609419708 0.28243455566858 2.02537990925329 1.2.1.2.1.2.2.1 -1.15049620565879 2 Bloc1s6 - G C* 3_prime_utr_variant non_coding_exon_variant nc_transcript_variant downstream_gene_variant g/c* 3_prime_utr_variant non_coding_exon_variant nc_transcript_variant downstream_gene_variant - - - - g/c* 3_prime_utr_variant non_coding_exon_variant nc_transcript_variant downstream_gene_variant g/c* 3_prime_utr_variant non_coding_exon_variant nc_transcript_variant downstream_gene_variant ~ - C* 3_prime_utr_variant non_coding_exon_variant nc_transcript_variant downstream_gene_variant - - - - - - - - - - C* 3_prime_utr_variant non_coding_exon_variant nc_transcript_variant downstream_gene_variant c* 3_prime_utr_variant non_coding_exon_variant nc_transcript_variant downstream_gene_variant g/c* 3_prime_utr_variant non_coding_exon_variant nc_transcript_variant downstream_gene_variant - - g/c* 3_prime_utr_variant non_coding_exon_variant nc_transcript_variant downstream_gene_variant C* 3_prime_utr_variant non_coding_exon_variant nc_transcript_variant downstream_gene_variant - - C* 3_prime_utr_variant non_coding_exon_variant nc_transcript_variant downstream_gene_variant - - ~ - - - - - g/c* 3_prime_utr_variant non_coding_exon_variant nc_transcript_variant downstream_gene_variant - - - - 122749645 2 122749645 JAX00501770 1.96901450114497 0.865123598961269 1.98182126269889 1.2.1.1.1.1.2.1 -1.26961211684238 2 Bloc1s6 rs45798395 G A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant - - - - - - A downstream_gene_variant - - A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant - - A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant A downstream_gene_variant - - A downstream_gene_variant - - A downstream_gene_variant 122752075 2 122752075 JAX00501770 1.96901450114497 0.219276861860523 2.17206374471089 1.1.1.2.1.1.1.1 -1.29261119002333 2 Bloc1s6 rs50727397 C T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant - - - - - - T downstream_gene_variant G downstream_gene_variant T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant - - T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant - - T downstream_gene_variant T downstream_gene_variant T downstream_gene_variant 122761579 2 122761579 JAX00501770 1.96901450114497 0.288249385252304 2.15782466071831 1.2.1.2.1.2.2.1 -1.15174878192304 2 Sqrdl rs228275506 G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T upstream_gene_variant - - 122763406 2 122763406 JAX00501770 1.96901450114497 0.288249385252304 2.15782466071831 1.2.1.2.1.2.2.1 -1.15174878192304 2 Sqrdl rs51105082 T C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant - - - - - - C upstream_gene_variant - - C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant - - C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant C upstream_gene_variant - - C upstream_gene_variant - - C upstream_gene_variant 122763457 2 122763457 JAX00501770 1.96901450114497 0.288249385252304 2.15782466071831 1.2.1.2.1.2.2.1 -1.15174878192304 2 Sqrdl rs27452760 C T upstream_gene_variant T upstream_gene_variant T upstream_gene_variant T upstream_gene_variant T upstream_gene_variant T upstream_gene_variant T upstream_gene_variant T upstream_gene_variant - - - - - - T upstream_gene_variant - - T upstream_gene_variant T upstream_gene_variant T upstream_gene_variant T upstream_gene_variant T upstream_gene_variant T upstream_gene_variant - - T upstream_gene_variant T upstream_gene_variant T upstream_gene_variant T upstream_gene_variant - - T upstream_gene_variant - - T upstream_gene_variant 122765196 2 122765196 JAX00501770 1.96901450114497 0.0869867550325762 2.19184773242253 1.2.1.1.1.2.2.1 -1.1775681710971 2 Sqrdl rs222602966 C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A upstream_gene_variant - - 122768301 2 122768301 JAX00501770 1.96901450114497 0.219276861860523 2.17206374471089 1.1.1.2.1.1.1.1 -1.29261119002333 2 Sqrdl rs227690606 G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A* non_coding_exon_variant nc_transcript_variant upstream_gene_variant - - 122768825 2 122768825 JAX00501770 1.96901450114497 1.77152287556241 1.57614600181498 1.1.1.1.1.2.1.1 -1.27683839288866 2 Sqrdl rs49947534 T C* upstream_gene_variant downstream_gene_variant C* upstream_gene_variant downstream_gene_variant C* upstream_gene_variant downstream_gene_variant C* upstream_gene_variant downstream_gene_variant C* upstream_gene_variant downstream_gene_variant C* upstream_gene_variant downstream_gene_variant C* upstream_gene_variant downstream_gene_variant C* upstream_gene_variant downstream_gene_variant - - - - - - C* upstream_gene_variant downstream_gene_variant C* upstream_gene_variant downstream_gene_variant C* upstream_gene_variant downstream_gene_variant C* upstream_gene_variant downstream_gene_variant C* upstream_gene_variant downstream_gene_variant C* upstream_gene_variant downstream_gene_variant C* upstream_gene_variant downstream_gene_variant C* upstream_gene_variant downstream_gene_variant - - C* upstream_gene_variant downstream_gene_variant C* upstream_gene_variant downstream_gene_variant C* upstream_gene_variant downstream_gene_variant C* upstream_gene_variant downstream_gene_variant - - C* upstream_gene_variant downstream_gene_variant C* upstream_gene_variant downstream_gene_variant C* upstream_gene_variant downstream_gene_variant 122768907 2 122768907 JAX00501770 1.96901450114497 1.77152287556241 1.57614600181498 1.1.1.1.1.2.1.1 -1.27683839288866 2 Sqrdl rs260468197 T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - C* upstream_gene_variant downstream_gene_variant - - 122768942 2 122768942 JAX00501770 1.96901450114497 0.219276861860523 2.17206374471089 1.1.1.2.1.1.1.1 -1.29261119002333 2 Sqrdl rs237532158 T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A* upstream_gene_variant downstream_gene_variant - - 122774976 2 122774976 JAX00501770 1.96901450114497 0.865123598961269 1.98182126269889 1.2.1.1.1.1.2.1 -1.26961211684238 2 Sqrdl rs248671767 T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - C nc_transcript_variant - - 122775236 2 122775236 JAX00501770 1.96901450114497 0.288249385252304 2.15782466071831 1.2.1.2.1.2.2.1 -1.15174878192304 2 Sqrdl rs250078841 C - - - - - - - - - - - - - - - - - - - - - - - - A nc_transcript_variant - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 122775600 2 122775600 JAX00501770 1.96901450114497 0.288249385252304 2.15782466071831 1.2.1.2.1.2.2.1 -1.15174878192304 2 Sqrdl rs229608273 C - - - - - - - - - - - - - - - - - - - - - - - - T nc_transcript_variant - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 122775689 2 122775689 JAX00501770 1.96901450114497 0.288249385252304 2.15782466071831 1.2.1.2.1.2.2.1 -1.15174878192304 2 Sqrdl rs238823489 T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - C nc_transcript_variant - - 122776070 2 122776070 JAX00501770 1.96901450114497 0.288249385252304 2.15782466071831 1.2.1.2.1.2.2.1 -1.15174878192304 2 Sqrdl rs45875118 G A nc_transcript_variant A nc_transcript_variant A nc_transcript_variant A nc_transcript_variant A nc_transcript_variant A nc_transcript_variant A nc_transcript_variant A nc_transcript_variant - - - - - - A nc_transcript_variant - - A nc_transcript_variant A nc_transcript_variant A nc_transcript_variant A nc_transcript_variant A nc_transcript_variant A nc_transcript_variant - - A nc_transcript_variant A nc_transcript_variant A nc_transcript_variant A nc_transcript_variant - - A nc_transcript_variant - - A nc_transcript_variant 122787106 2 122787106 JAX00501770 1.96901450114497 0.219276861860523 2.17206374471089 1.1.1.2.1.1.1.1 -1.29261119002333 2 Sqrdl rs4139655 C T* nmd_transcript_variant nc_transcript_variant downstream_gene_variant T* nmd_transcript_variant nc_transcript_variant downstream_gene_variant T* nmd_transcript_variant nc_transcript_variant downstream_gene_variant T* nmd_transcript_variant nc_transcript_variant downstream_gene_variant T* nmd_transcript_variant nc_transcript_variant downstream_gene_variant T* nmd_transcript_variant nc_transcript_variant downstream_gene_variant t* nmd_transcript_variant nc_transcript_variant downstream_gene_variant T* nmd_transcript_variant nc_transcript_variant downstream_gene_variant - - - - - - T* nmd_transcript_variant nc_transcript_variant downstream_gene_variant T* nmd_transcript_variant nc_transcript_variant downstream_gene_variant T* nmd_transcript_variant nc_transcript_variant downstream_gene_variant T* nmd_transcript_variant nc_transcript_variant downstream_gene_variant T* nmd_transcript_variant nc_transcript_variant downstream_gene_variant T* nmd_transcript_variant nc_transcript_variant downstream_gene_variant T* nmd_transcript_variant nc_transcript_variant downstream_gene_variant T* nmd_transcript_variant nc_transcript_variant downstream_gene_variant - - T* nmd_transcript_variant nc_transcript_variant downstream_gene_variant T* nmd_transcript_variant nc_transcript_variant downstream_gene_variant T* nmd_transcript_variant nc_transcript_variant downstream_gene_variant T* nmd_transcript_variant nc_transcript_variant downstream_gene_variant - - T* nmd_transcript_variant nc_transcript_variant downstream_gene_variant T* nmd_transcript_variant nc_transcript_variant downstream_gene_variant T* nmd_transcript_variant nc_transcript_variant downstream_gene_variant 122790051 2 122790051 JAX00501770 1.96901450114497 0.0869867550325762 2.19184773242253 1.2.1.1.1.2.2.1 -1.1775681710971 2 Sqrdl rs239519876 G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A* nmd_transcript_variant nc_transcript_variant downstream_gene_variant - - 122793184 2 122793184 JAX00501770 1.96901450114497 0.0869867550325762 2.19184773242253 1.2.1.1.1.2.2.1 -1.1775681710971 2 Sqrdl rs265941788 G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A* nmd_transcript_variant nc_transcript_variant - - 122794763 2 122794763 JAX00501770 1.96901450114497 0.0869867550325762 2.19184773242253 1.2.1.1.1.2.2.1 -1.1775681710971 2 Sqrdl rs220616452 G A* nmd_transcript_variant nc_transcript_variant upstream_gene_variant A* nmd_transcript_variant nc_transcript_variant upstream_gene_variant g/a* nmd_transcript_variant nc_transcript_variant upstream_gene_variant A* nmd_transcript_variant nc_transcript_variant upstream_gene_variant g/a* nmd_transcript_variant nc_transcript_variant upstream_gene_variant g/a* nmd_transcript_variant nc_transcript_variant upstream_gene_variant A* nmd_transcript_variant nc_transcript_variant upstream_gene_variant g/a* nmd_transcript_variant nc_transcript_variant upstream_gene_variant - - - - - - A* nmd_transcript_variant nc_transcript_variant upstream_gene_variant - - A* nmd_transcript_variant nc_transcript_variant upstream_gene_variant a* nmd_transcript_variant nc_transcript_variant upstream_gene_variant A* nmd_transcript_variant nc_transcript_variant upstream_gene_variant a* nmd_transcript_variant nc_transcript_variant upstream_gene_variant a* nmd_transcript_variant nc_transcript_variant upstream_gene_variant A* nmd_transcript_variant nc_transcript_variant upstream_gene_variant - - A* nmd_transcript_variant nc_transcript_variant upstream_gene_variant A* nmd_transcript_variant nc_transcript_variant upstream_gene_variant A* nmd_transcript_variant nc_transcript_variant upstream_gene_variant g/a* nmd_transcript_variant nc_transcript_variant upstream_gene_variant - - A* nmd_transcript_variant nc_transcript_variant upstream_gene_variant g/a* nmd_transcript_variant nc_transcript_variant upstream_gene_variant A* nmd_transcript_variant nc_transcript_variant upstream_gene_variant 122798187 2 122798187 JAX00501770 1.96901450114497 0.0869867550325762 2.19184773242253 1.2.1.1.1.2.2.1 -1.1775681710971 2 Sqrdl rs249880056 T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G* synonymous_variant nmd_transcript_variant non_coding_exon_variant nc_transcript_variant upstream_gene_variant - - 122801728 2 122801728 JAX00501770 1.96901450114497 0.219276861860523 2.17206374471089 1.1.1.2.1.1.1.1 -1.29261119002333 2 Sqrdl rs220361337 T G* nmd_transcript_variant downstream_gene_variant G* nmd_transcript_variant downstream_gene_variant G* nmd_transcript_variant downstream_gene_variant G* nmd_transcript_variant downstream_gene_variant G* nmd_transcript_variant downstream_gene_variant G* nmd_transcript_variant downstream_gene_variant G* nmd_transcript_variant downstream_gene_variant G* nmd_transcript_variant downstream_gene_variant - - - - - - G* nmd_transcript_variant downstream_gene_variant G* nmd_transcript_variant downstream_gene_variant G* nmd_transcript_variant downstream_gene_variant G* nmd_transcript_variant downstream_gene_variant G* nmd_transcript_variant downstream_gene_variant G* nmd_transcript_variant downstream_gene_variant G* nmd_transcript_variant downstream_gene_variant G* nmd_transcript_variant downstream_gene_variant - - G* nmd_transcript_variant downstream_gene_variant G* nmd_transcript_variant downstream_gene_variant G* nmd_transcript_variant downstream_gene_variant G* nmd_transcript_variant downstream_gene_variant - - G* nmd_transcript_variant downstream_gene_variant - - G* nmd_transcript_variant downstream_gene_variant 122802784 2 122802784 JAX00501770 1.96901450114497 0.288249385252304 2.15782466071831 1.2.1.2.1.2.2.1 -1.15174878192304 2 Sqrdl rs229902064 A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G* nmd_transcript_variant downstream_gene_variant - - - - - - G* nmd_transcript_variant downstream_gene_variant - - - - - - - - - - - - - - 122805975 2 122805975 JAX00501770 1.96901450114497 0.984311780187601 1.9365575997185 1.1.2.1.1.1.1.1 -1.16902165381402 2 Sqrdl rs217874392 G - - - - - - - - - - - - - - - - - - - - - - - - A nmd_transcript_variant - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 122809834 2 122809834 JAX00501770 1.96901450114497 0.0869867550325762 2.19184773242253 1.2.1.1.1.2.2.1 -1.1775681710971 2 Sqrdl rs242110115 A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G downstream_gene_variant - - 122810030 2 122810030 JAX00501770 1.96901450114497 0.0869867550325762 2.19184773242253 1.2.1.1.1.2.2.1 -1.1775681710971 2 Sqrdl rs238696766 A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G downstream_gene_variant - - 122813052 2 122813052 JAX00501770 1.96901450114497 1.77152287556241 1.57614600181498 1.1.1.1.1.2.1.1 -1.27683839288866 2 Sqrdl rs257458515 G - - - - - - - - - - - - - - - - - - - - - - - - A downstream_gene_variant - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 123275432 2 123275432 JAX00501830 1.98411709017392 0.741775509890056 2.04206077541759 1.2.1.1.1.1.2.1 -1.24127433747268 2 Gm13988 rs27454577 C G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant - - - - - - G downstream_gene_variant - - G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant - - G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant G downstream_gene_variant - - G downstream_gene_variant - - G downstream_gene_variant