draw-mhmm -- not currently supported
Usage: draw-mhmm [options] <HMM file>
Description:
'draw-mhmm' converts a given Meta-MEME hidden Markov model into a format suitable for input to the graphviz program from AT&T Research.
Input:
- <HMM file> - An HMM in Meta-MEME format (as produced by mhmm) must be provided. If the filename is given as '-', then 'mhmms' will attempt to read the HMM from standard input.
Output:
The program writes to standard output a description of the HMM in graphviz format.
Options:
- --mintrans <value> - Only include in the graph edges whose transition probabilities exceed the given value.
- --consensus - Print consensus along with motif id.
- --verbosity 1|2|3|4|5 - Set the verbosity level of the output to stderr. The default level is 2.
Bugs: None known.
Author: William Stafford Noble.