Index of /mus/MEME/meme_4.7.0/src

	Name	Last modified	Size	Description
	Parent Directory		-
	Makefile.am	2011-09-28 08:11	14K
	aa.h	2011-09-28 08:11	2.4K
	align.h	2011-09-28 08:11	866
	alignment.c	2011-09-28 08:11	35K
	alignment.h	2011-09-28 08:11	9.0K
	alphabet.c	2011-09-28 08:11	16K
	alphabet.h	2011-09-28 08:11	3.3K
	alphtype.c	2011-09-28 08:11	1.1K
	ama.c	2011-09-28 08:11	27K
	ama_scan.c	2011-09-28 08:11	9.4K
	ama_scan.h	2011-09-28 08:11	1.8K
	ame.c	2011-09-28 08:11	83K
	ame.h	2011-09-28 08:11	5.3K
	array-list.c	2011-09-28 08:11	16K
	array-list.h	2011-09-28 08:11	6.1K
	array.c	2011-09-28 08:11	32K
	array.h	2011-09-28 08:11	15K
	background.c	2011-09-28 08:11	21K
	background.h	2011-09-28 08:11	1.8K
	banner.c	2011-09-28 08:11	2.2K
	banner.h	2011-09-28 08:11	219
	beadstring-xml.h	2011-09-28 08:11	445
	beadstring.c	2011-09-28 08:11	40K
	beadstring.h	2011-09-28 08:11	1.9K
	binary-search.c	2011-09-28 08:11	953
	binary-search.h	2011-09-28 08:11	1.1K
	branching_search.c	2011-09-28 08:11	23K
	buffer.c	2011-09-28 08:11	23K
	buffer.h	2011-09-28 08:11	9.9K
	build-hmm.c	2011-09-28 08:11	49K
	build-hmm.h	2011-09-28 08:11	1.9K
	calculate_p_y.c	2011-09-28 08:11	21K
	calculate_p_y.h	2011-09-28 08:11	3.0K
	centrimo.c	2011-09-28 08:11	27K
	ceqlogo.c	2011-09-28 08:11	77K
	ceqlogo.h	2011-09-28 08:11	45K
	cisml-dtd.h	2011-09-28 08:11	2.1K
	cisml-sax.c	2011-09-28 08:11	20K
	cisml-sax.h	2011-09-28 08:11	2.9K
	cisml.c	2011-09-28 08:11	112K
	cisml.h	2011-09-28 08:11	48K
	clustalw-io.c	2011-09-28 08:11	15K
	clustalw-io.h	2011-09-28 08:11	1.6K
	clustalw2fasta.c	2011-09-28 08:11	4.1K
	clustalw2phylip.c	2011-09-28 08:11	1.3K
	compute-prior-dist.c	2011-09-28 08:11	2.9K
	compute-uniform-prio..>	2011-09-28 08:11	2.4K
	curves.h	2011-09-28 08:11	1.9K
	data-block-reader.c	2011-09-28 08:11	7.6K
	data-block-reader.h	2011-09-28 08:11	5.0K
	data-block.c	2011-09-28 08:11	5.0K
	data-block.h	2011-09-28 08:11	3.9K
	diagram.c	2011-09-28 08:11	14K
	diagram.h	2011-09-28 08:11	959
	discretize.c	2011-09-28 08:11	15K
	display.c	2011-09-28 08:11	85K
	display.h	2011-09-28 08:11	3.5K
	display_globals.h	2011-09-28 08:11	273
	dp.c	2011-09-28 08:11	24K
	dp.h	2011-09-28 08:11	3.7K
	dpalign.c	2011-09-28 08:11	19K
	dpalign.h	2011-09-28 08:11	1.3K
	draw-mhmm.c	2011-09-28 08:11	13K
	dreme-sax.c	2011-09-28 08:11	36K
	dreme-sax.h	2011-09-28 08:11	12K
	em.c	2011-09-28 08:11	6.9K
	em.h	2011-09-28 08:11	1.2K
	empirical-qvalue.c	2011-09-28 08:11	9.3K
	empirical-qvalue.h	2011-09-28 08:11	1.0K
	eps2png.h	2011-09-28 08:11	593
	evomodel.c	2011-09-28 08:11	41K
	evomodel.h	2011-09-28 08:11	7.2K
	evomodel_with_loss.c	2011-09-28 08:11	33K
	evomodel_with_loss.h	2011-09-28 08:11	864
	fasta-io.c	2011-09-28 08:11	15K
	fasta-io.h	2011-09-28 08:11	2.7K
	fcodon.h	2011-09-28 08:11	100K
	fimo.c	2011-09-28 08:11	40K
	fisher_exact.c	2011-09-28 08:11	2.1K
	fisher_exact.h	2011-09-28 08:11	917
	fitevd.c	2011-09-28 08:11	58K
	fitevd.h	2011-09-28 08:11	12K
	gendb.c	2011-09-28 08:11	13K
	gendb.h	2011-09-28 08:11	833
	general.h	2011-09-28 08:11	5.3K
	getsize.c	2011-09-28 08:11	9.4K
	glam2_alignment.c	2011-09-28 08:11	1.6K
	glam2_alignment.h	2011-09-28 08:11	793
	glam2_alphabet.c	2011-09-28 08:11	3.0K
	glam2_alphabet.h	2011-09-28 08:11	776
	glam2_args.c	2011-09-28 08:11	8.2K
	glam2_args.h	2011-09-28 08:11	1.1K
	glam2_column_sample.c	2011-09-28 08:11	12K
	glam2_column_sample.h	2011-09-28 08:11	166
	glam2_convolve.h	2011-09-28 08:11	596
	glam2_dirichlet.c	2011-09-28 08:11	8.7K
	glam2_dirichlet.h	2011-09-28 08:11	3.7K
	glam2_dna_prior.c	2011-09-28 08:11	155
	glam2_dna_prior.h	2011-09-28 08:11	124
	glam2_fasta.c	2011-09-28 08:11	4.2K
	glam2_fasta.h	2011-09-28 08:11	1.9K
	glam2_glam2.c	2011-09-28 08:11	5.9K
	glam2_glam2.h	2011-09-28 08:11	2.1K
	glam2_glam2_aln.c	2011-09-28 08:11	1.7K
	glam2_glam2_aln.h	2011-09-28 08:11	1.9K
	glam2_glam2format.c	2011-09-28 08:11	9.7K
	glam2_glam2mask.c	2011-09-28 08:11	2.4K
	glam2_heap.c	2011-09-28 08:11	1.0K
	glam2_heap.h	2011-09-28 08:11	956
	glam2_init.c	2011-09-28 08:11	5.7K
	glam2_init.h	2011-09-28 08:11	97
	glam2_motif.c	2011-09-28 08:11	1.9K
	glam2_motif.h	2011-09-28 08:11	499
	glam2_output.c	2011-09-28 08:11	6.9K
	glam2_output.h	2011-09-28 08:11	262
	glam2_recode3_20comp.c	2011-09-28 08:11	4.6K
	glam2_recode3_20comp.h	2011-09-28 08:11	138
	glam2_scan.c	2011-09-28 08:11	7.2K
	glam2_scan.h	2011-09-28 08:11	1.1K
	glam2_scan_args.c	2011-09-28 08:11	2.9K
	glam2_scan_args.h	2011-09-28 08:11	615
	glam2_scan_init.c	2011-09-28 08:11	3.9K
	glam2_scan_init.h	2011-09-28 08:11	106
	glam2_scan_output.c	2011-09-28 08:11	1.0K
	glam2_scan_output.h	2011-09-28 08:11	174
	glam2_site_sample.c	2011-09-28 08:11	14K
	glam2_site_sample.h	2011-09-28 08:11	301
	glam2_util.c	2011-09-28 08:11	13K
	glam2_util.h	2011-09-28 08:11	6.2K
	glam2_version.h	2011-09-28 08:11	7
	gomo.c	2011-09-28 08:11	70K
	gomo_highlight.c	2011-09-28 08:11	27K
	gomo_highlight.h	2011-09-28 08:11	926
	hash.h	2011-09-28 08:11	1.3K
	hash_alph.c	2011-09-28 08:11	12K
	hash_alph.h	2011-09-28 08:11	10K
	hash_table.c	2011-09-28 08:11	12K
	hash_table.h	2011-09-28 08:11	2.2K
	hash_table_string.h	2011-09-28 08:11	2.3K
	hashu.h	2011-09-28 08:11	1.9K
	heap.c	2011-09-28 08:11	13K
	heap.h	2011-09-28 08:11	2.4K
	histogram.h	2011-09-28 08:11	3.0K
	html-data.c	2011-09-28 08:11	29K
	html-data.h	2011-09-28 08:11	2.8K
	ic.h	2011-09-28 08:11	606
	init.c	2011-09-28 08:11	37K
	io.c	2011-09-28 08:11	3.7K
	io.h	2011-09-28 08:11	785
	justlike.c	2011-09-28 08:11	2.1K
	karlin.c	2011-09-28 08:11	6.4K
	karlin.h	2011-09-28 08:11	2.3K
	likelihood.c	2011-09-28 08:11	9.4K
	linked-list.c	2011-09-28 08:11	7.4K
	linked-list.h	2011-09-28 08:11	2.7K
	llr.c	2011-09-28 08:11	24K
	llr.h	2011-09-28 08:11	886
	log-hmm.c	2011-09-28 08:11	13K
	log-hmm.h	2011-09-28 08:11	1.5K
	logodds.c	2011-09-28 08:11	26K
	logodds.h	2011-09-28 08:11	5.7K
	logs.c	2011-09-28 08:11	1.8K
	logs.h	2011-09-28 08:11	2.3K
	macros.h	2011-09-28 08:11	12K
	mast-util.c	2011-09-28 08:11	36K
	mast.c	2011-09-28 08:11	80K
	mast.h	2011-09-28 08:11	4.8K
	mast2txt.c	2011-09-28 08:11	75K
	match.c	2011-09-28 08:11	17K
	match.h	2011-09-28 08:11	3.6K
	matrix.c	2011-09-28 08:11	40K
	matrix.h	2011-09-28 08:11	15K
	mcast.c	2011-09-28 08:11	14K
	meme-dtd.h	2011-09-28 08:11	5.8K
	meme-print-html.c	2011-09-28 08:11	1.7K
	meme-print-html.h	2011-09-28 08:11	305
	meme-sax.c	2011-09-28 08:11	74K
	meme-sax.h	2011-09-28 08:11	6.7K
	meme-xml-html.c	2011-09-28 08:11	2.9K
	meme.c	2011-09-28 08:11	22K
	meme.h	2011-09-28 08:11	26K
	meme2images.c	2011-09-28 08:11	6.0K
	meme_util.c	2011-09-28 08:11	19K
	merger.c	2011-09-28 08:11	5.1K
	merger.h	2011-09-28 08:11	1.2K
	message.c	2011-09-28 08:11	17K
	message.h	2011-09-28 08:11	5.3K
	meta-pssm-distr.h	2011-09-28 08:11	490
	metameme.c	2011-09-28 08:11	2.8K
	metameme.h	2011-09-28 08:11	1.0K
	mhmm-dtd.h	2011-09-28 08:11	1.9K
	mhmm-io.c	2011-09-28 08:11	2.1K
	mhmm-state.c	2011-09-28 08:11	14K
	mhmm-state.h	2011-09-28 08:11	7.9K
	mhmm.c	2011-09-28 08:11	33K
	mhmm.h	2011-09-28 08:11	2.6K
	mhmme.c	2011-09-28 08:11	5.8K
	mhmms.c	2011-09-28 08:11	63K
	mhmms.h	2011-09-28 08:11	8.9K
	mhmmscan.c	2011-09-28 08:11	34K
	motif-in-common.c	2011-09-28 08:11	918
	motif-in-common.h	2011-09-28 08:11	459
	motif-in-dreme-xml.c	2011-09-28 08:11	8.4K
	motif-in-dreme-xml.h	2011-09-28 08:11	690
	motif-in-flags.h	2011-09-28 08:11	127
	motif-in-meme-html.c	2011-09-28 08:11	37K
	motif-in-meme-html.h	2011-09-28 08:11	700
	motif-in-meme-text.c	2011-09-28 08:11	40K
	motif-in-meme-text.h	2011-09-28 08:11	702
	motif-in-meme-xml.c	2011-09-28 08:11	29K
	motif-in-meme-xml.h	2011-09-28 08:11	687
	motif-in.c	2011-09-28 08:11	17K
	motif-in.h	2011-09-28 08:11	3.2K
	motif-spec.h	2011-09-28 08:11	2.2K
	motif.c	2011-09-28 08:11	29K
	motif.h	2011-09-28 08:11	13K
	motif_regexp.c	2011-09-28 08:11	5.9K
	motif_regexp.h	2011-09-28 08:11	387
	motifs.c	2011-09-28 08:11	7.1K
	motifs.h	2011-09-28 08:11	551
	motiph-scoring.c	2011-09-28 08:11	36K
	motiph-scoring.h	2011-09-28 08:11	3.6K
	motiph.c	2011-09-28 08:11	31K
	mp.c	2011-09-28 08:11	2.9K
	mp.h	2011-09-28 08:11	711
	mtype.h	2011-09-28 08:11	258
	nrutil.h	2011-09-28 08:11	1.2K
	object-list.c	2011-09-28 08:11	7.2K
	object-list.h	2011-09-28 08:11	2.9K
	oops.c	2011-09-28 08:11	12K
	order.c	2011-09-28 08:11	14K
	order.h	2011-09-28 08:11	5.1K
	params.h	2011-09-28 08:11	2.6K
	partition.c	2011-09-28 08:11	1.6K
	partition.h	2011-09-28 08:11	1.0K
	pmp_bf.c	2011-09-28 08:11	14K
	prior-dist.c	2011-09-28 08:11	3.7K
	prior-dist.h	2011-09-28 08:11	2.7K
	prior-reader-from-psp.c	2011-09-28 08:11	18K
	prior-reader-from-psp.h	2011-09-28 08:11	891
	prior.c	2011-09-28 08:11	8.4K
	prior.h	2011-09-28 08:11	1.6K
	psp.c	2011-09-28 08:11	20K
	psp.h	2011-09-28 08:11	815
	pssm-distr.c	2011-09-28 08:11	5.4K
	pssm-distr.h	2011-09-28 08:11	715
	pssm.c	2011-09-28 08:11	46K
	pssm.h	2011-09-28 08:11	6.1K
	qvalue.c	2011-09-28 08:11	24K
	qvalue.h	2011-09-28 08:11	4.5K
	ranksum_test.c	2011-09-28 08:11	22K
	ranksum_test.h	2011-09-28 08:11	7.1K
	rdb-matrix.c	2011-09-28 08:11	15K
	rdb-matrix.h	2011-09-28 08:11	4.1K
	read-mhmm.c	2011-09-28 08:11	24K
	read-mhmm.h	2011-09-28 08:11	795
	read_csv.c	2011-09-28 08:11	2.6K
	read_csv.h	2011-09-28 08:11	759
	read_seq_file.c	2011-09-28 08:11	12K
	read_seq_file.h	2011-09-28 08:11	513
	read_sequence.c	2011-09-28 08:11	7.4K
	read_sequence.h	2011-09-28 08:11	645
	readseq.c	2011-09-28 08:11	36K
	reconcile-tree-align..>	2011-09-28 08:11	3.0K
	red-black-tree.c	2011-09-28 08:11	25K
	red-black-tree.h	2011-09-28 08:11	7.6K
	reduce-alignment.c	2011-09-28 08:11	2.0K
	regex-utils.c	2011-09-28 08:11	6.6K
	regex-utils.h	2011-09-28 08:11	3.8K
	regress.c	2011-09-28 08:11	839
	regress.h	2011-09-28 08:11	972
	remove-alignment-gaps.c	2011-09-28 08:11	1.8K
	reservoir.c	2011-09-28 08:11	4.1K
	reservoir.h	2011-09-28 08:11	2.7K
	sax-parser-utils.c	2011-09-28 08:11	9.2K
	sax-parser-utils.h	2011-09-28 08:11	6.6K
	scanned-sequence.c	2011-09-28 08:11	1.3K
	scanned-sequence.h	2011-09-28 08:11	803
	scored-sites.c	2011-09-28 08:11	11K
	scored-sites.h	2011-09-28 08:11	2.5K
	seed.c	2011-09-28 08:11	8.7K
	seed.h	2011-09-28 08:11	6.4K
	seed_diffs.c	2011-09-28 08:11	17K
	seed_diffs.h	2011-09-28 08:11	2.5K
	seq-reader-from-fasta.c	2011-09-28 08:11	19K
	seq-reader-from-fasta.h	2011-09-28 08:11	942
	seq.c	2011-09-28 08:11	22K
	seq.h	2011-09-28 08:11	6.6K
	seq2theta.c	2011-09-28 08:11	9.6K
	shadow.c	2011-09-28 08:11	19K
	shuffle_int.h	2011-09-28 08:11	331
	simple-getopt.c	2011-09-28 08:11	11K
	simple-getopt.h	2011-09-28 08:11	4.4K
	sp_matrix.c	2011-09-28 08:11	36K
	sp_matrix.h	2011-09-28 08:11	6.1K
	spamo-cisml.c	2011-09-28 08:11	20K
	spamo-cisml.h	2011-09-28 08:11	2.1K
	spamo-matches.c	2011-09-28 08:11	19K
	spamo-matches.h	2011-09-28 08:11	6.1K
	spamo-output.c	2011-09-28 08:11	23K
	spamo-output.h	2011-09-28 08:11	2.5K
	spamo-scan.c	2011-09-28 08:11	8.0K
	spamo-scan.h	2011-09-28 08:11	1.0K
	spamo.c	2011-09-28 08:11	53K
	spearman-rank-correl..>	2011-09-28 08:11	3.2K
	spearman-rank-correl..>	2011-09-28 08:11	839
	split.h	2011-09-28 08:11	352
	star.h	2011-09-28 08:11	864
	starts.c	2011-09-28 08:11	15K
	string-builder.c	2011-09-28 08:11	8.9K
	string-builder.h	2011-09-28 08:11	3.7K
	string-list.c	2011-09-28 08:11	24K
	string-list.h	2011-09-28 08:11	8.4K
	string-match.c	2011-09-28 08:11	10K
	string-match.h	2011-09-28 08:11	1.9K
	strlcpy.h	2011-09-28 08:11	352
	subseq7.c	2011-09-28 08:11	27K
	subst-matrix.c	2011-09-28 08:11	18K
	subst-matrix.h	2011-09-28 08:11	1.0K
	substmatrix-table.c	2011-09-28 08:11	12K
	substmatrix-table.h	2011-09-28 08:11	4.2K
	tcm.c	2011-09-28 08:11	7.2K
	tomtom.c	2011-09-28 08:11	101K
	tomtom.h	2011-09-28 08:11	2.8K
	tree.c	2011-09-28 08:11	36K
	tree.h	2011-09-28 08:11	9.0K
	ureadseq.c	2011-09-28 08:11	53K
	ureadseq.h	2011-09-28 08:11	5.0K
	user.h	2011-09-28 08:11	1.3K
	utest.h	2011-09-28 08:11	5.1K
	utils.c	2011-09-28 08:11	28K
	utils.h	2011-09-28 08:11	16K
	verbosity.c	2011-09-28 08:11	908
	write-mhmm.c	2011-09-28 08:11	13K
	write-mhmm.h	2011-09-28 08:11	2.1K
	xml-out.c	2011-09-28 08:11	3.5K
	xml-out.h	2011-09-28 08:11	1.8K
	xml-util.c	2011-09-28 08:11	8.9K
	xml-util.h	2011-09-28 08:11	3.3K
	xsltproc_lite.c	2011-09-28 08:11	1.8K
	Makefile.in	2011-09-28 08:13	377K
	eps2png.c	2011-09-28 08:29	3.7K
	Makefile	2011-10-07 10:32	320K
	filters/	2011-10-07 10:32	-
	dir.h	2011-10-07 10:32	116
	projrel.h	2011-10-07 10:32	76
	libxml2/	2011-10-07 10:33	-
	libxslt/	2011-10-07 10:34	-
	libexslt/	2011-10-07 10:34	-
	libcommon_la-alignme..>	2011-10-07 10:34	344
	libcommon_la-alignme..>	2011-10-07 10:34	30K
	libcommon_la-alphabe..>	2011-10-07 10:34	341
	libcommon_la-alphabet.o	2011-10-07 10:34	24K
	libcommon_la-array-l..>	2011-10-07 10:34	347
	libcommon_la-array-l..>	2011-10-07 10:34	12K
	libcommon_la-array.lo	2011-10-07 10:34	332
	libcommon_la-array.o	2011-10-07 10:34	22K
	libcommon_la-backgro..>	2011-10-07 10:34	347
	libcommon_la-backgro..>	2011-10-07 10:34	21K
	libcommon_la-binary-..>	2011-10-07 10:34	356
	libcommon_la-binary-..>	2011-10-07 10:34	1.4K
	libcommon_la-buffer.lo	2011-10-07 10:34	335
	libcommon_la-buffer.o	2011-10-07 10:34	15K
	libcommon_la-build-h..>	2011-10-07 10:34	344
	libcommon_la-build-h..>	2011-10-07 10:34	31K
	libcommon_la-ceqlogo.lo	2011-10-07 10:34	338
	libcommon_la-ceqlogo.o	2011-10-07 10:34	95K
	libcommon_la-cisml.lo	2011-10-07 10:34	332
	libcommon_la-cisml.o	2011-10-07 10:34	88K
	libcommon_la-clustal..>	2011-10-07 10:34	350
	libcommon_la-clustal..>	2011-10-07 10:34	11K
	libcommon_la-dp.lo	2011-10-07 10:34	323
	libcommon_la-dp.o	2011-10-07 10:34	10K
	libcommon_la-dreme-s..>	2011-10-07 10:34	344
	libcommon_la-dreme-s..>	2011-10-07 10:34	25K
	libcommon_la-empiric..>	2011-10-07 10:34	365
	libcommon_la-empiric..>	2011-10-07 10:34	3.2K
	libcommon_la-eps2png.lo	2011-10-07 10:34	338
	libcommon_la-eps2png.o	2011-10-07 10:34	5.8K
	libcommon_la-evomode..>	2011-10-07 10:34	341
	libcommon_la-evomodel.o	2011-10-07 10:34	30K
	libcommon_la-evomode..>	2011-10-07 10:34	371
	libcommon_la-evomode..>	2011-10-07 10:34	11K
	libcommon_la-fasta-i..>	2011-10-07 10:34	341
	libcommon_la-fasta-io.o	2011-10-07 10:34	9.9K
	libcommon_la-fisher_..>	2011-10-07 10:34	353
	libcommon_la-fisher_..>	2011-10-07 10:34	3.4K
	libcommon_la-fitevd.lo	2011-10-07 10:34	335
	libcommon_la-fitevd.o	2011-10-07 10:34	36K
	libcommon_la-gendb.lo	2011-10-07 10:34	332
	libcommon_la-gendb.o	2011-10-07 10:34	11K
	libcommon_la-hash_al..>	2011-10-07 10:34	344
	libcommon_la-hash_al..>	2011-10-07 10:34	10K
	libcommon_la-hash_ta..>	2011-10-07 10:34	347
	libcommon_la-hash_ta..>	2011-10-07 10:34	6.4K
	libcommon_la-heap.lo	2011-10-07 10:34	329
	libcommon_la-heap.o	2011-10-07 10:34	6.5K
	libcommon_la-html-da..>	2011-10-07 10:34	344
	libcommon_la-html-da..>	2011-10-07 10:34	20K
	libcommon_la-io.lo	2011-10-07 10:34	323
	libcommon_la-io.o	2011-10-07 10:34	4.0K
	libcommon_la-karlin.lo	2011-10-07 10:34	335
	libcommon_la-karlin.o	2011-10-07 10:34	5.8K
	libcommon_la-linked-..>	2011-10-07 10:34	350
	libcommon_la-linked-..>	2011-10-07 10:34	5.0K
	libcommon_la-log-hmm.lo	2011-10-07 10:34	338
	libcommon_la-log-hmm.o	2011-10-07 10:34	6.5K
	libcommon_la-logodds.lo	2011-10-07 10:34	338
	libcommon_la-logodds.o	2011-10-07 10:34	20K
	libcommon_la-mast-ut..>	2011-10-07 10:34	344
	libcommon_la-mast-ut..>	2011-10-07 10:34	21K
	libcommon_la-match.lo	2011-10-07 10:34	332
	libcommon_la-match.o	2011-10-07 10:34	8.5K
	libcommon_la-matrix.lo	2011-10-07 10:34	335
	libcommon_la-matrix.o	2011-10-07 10:34	26K
	libcommon_la-meme-sa..>	2011-10-07 10:34	341
	libcommon_la-meme-sax.o	2011-10-07 10:34	48K
	libcommon_la-metamem..>	2011-10-07 10:34	341
	libcommon_la-metameme.o	2011-10-07 10:34	4.1K
	libcommon_la-mhmm.lo	2011-10-07 10:34	329
	libcommon_la-mhmm.o	2011-10-07 10:34	15K
	libcommon_la-mhmms.lo	2011-10-07 10:34	332
	libcommon_la-mhmms.o	2011-10-07 10:34	37K
	libcommon_la-mhmm-st..>	2011-10-07 10:34	347
	libcommon_la-mhmm-st..>	2011-10-07 10:34	9.6K
	libcommon_la-motif-i..>	2011-10-07 10:34	362
	libcommon_la-motif-i..>	2011-10-07 10:34	1.7K
	libcommon_la-motif-i..>	2011-10-07 10:34	371
	libcommon_la-motif-i..>	2011-10-07 10:34	7.6K
	libcommon_la-motif-i..>	2011-10-07 10:34	341
	libcommon_la-motif-in.o	2011-10-07 10:34	19K
	libcommon_la-motif-i..>	2011-10-07 10:34	371
	libcommon_la-motif-i..>	2011-10-07 10:34	30K
	libcommon_la-motif-i..>	2011-10-07 10:34	371
	libcommon_la-motif-i..>	2011-10-07 10:34	34K
	libcommon_la-motif-i..>	2011-10-07 10:34	368
	libcommon_la-motif-i..>	2011-10-07 10:34	20K
	libcommon_la-motif.lo	2011-10-07 10:34	332
	libcommon_la-motif.o	2011-10-07 10:34	20K
	libcommon_la-motif_r..>	2011-10-07 10:34	353
	libcommon_la-motif_r..>	2011-10-07 10:34	5.7K
	libcommon_la-motifs.lo	2011-10-07 10:34	335
	libcommon_la-motifs.o	2011-10-07 10:34	5.2K
	libcommon_la-motiph-..>	2011-10-07 10:34	359
	libcommon_la-motiph-..>	2011-10-07 10:34	26K
	libcommon_la-object-..>	2011-10-07 10:34	350
	libcommon_la-object-..>	2011-10-07 10:34	4.2K
	libcommon_la-data-bl..>	2011-10-07 10:34	368
	libcommon_la-data-bl..>	2011-10-07 10:34	3.2K
	libcommon_la-data-bl..>	2011-10-07 10:34	347
	libcommon_la-data-bl..>	2011-10-07 10:34	2.7K
	libcommon_la-order.lo	2011-10-07 10:34	332
	libcommon_la-order.o	2011-10-07 10:34	11K
	libcommon_la-prior-d..>	2011-10-07 10:34	347
	libcommon_la-prior-d..>	2011-10-07 10:34	2.5K
	libcommon_la-prior-r..>	2011-10-07 10:34	380
	libcommon_la-prior-r..>	2011-10-07 10:34	10K
	libcommon_la-pssm-di..>	2011-10-07 10:34	347
	libcommon_la-pssm-di..>	2011-10-07 10:34	3.7K
	libcommon_la-pssm.lo	2011-10-07 10:34	329
	libcommon_la-pssm.o	2011-10-07 10:34	29K
	libcommon_la-qvalue.lo	2011-10-07 10:34	335
	libcommon_la-qvalue.o	2011-10-07 10:34	10K
	libcommon_la-ranksum..>	2011-10-07 10:34	353
	libcommon_la-ranksum..>	2011-10-07 10:34	13K
	libcommon_la-rdb-mat..>	2011-10-07 10:34	347
	libcommon_la-rdb-mat..>	2011-10-07 10:34	12K
	libcommon_la-read-mh..>	2011-10-07 10:34	344
	libcommon_la-read-mh..>	2011-10-07 10:34	20K
	libcommon_la-read_se..>	2011-10-07 10:34	356
	libcommon_la-read_se..>	2011-10-07 10:34	7.1K
	libcommon_la-red-bla..>	2011-10-07 10:34	359
	libcommon_la-red-bla..>	2011-10-07 10:34	11K
	libcommon_la-regex-u..>	2011-10-07 10:34	350
	libcommon_la-regex-u..>	2011-10-07 10:34	4.9K
	libcommon_la-regress.lo	2011-10-07 10:34	338
	libcommon_la-regress.o	2011-10-07 10:34	1.6K
	libcommon_la-reservo..>	2011-10-07 10:34	344
	libcommon_la-reservo..>	2011-10-07 10:34	2.5K
	libcommon_la-sax-par..>	2011-10-07 10:34	365
	libcommon_la-sax-par..>	2011-10-07 10:34	5.3K
	libcommon_la-scanned..>	2011-10-07 10:34	365
	libcommon_la-scanned..>	2011-10-07 10:34	2.1K
	libcommon_la-scored-..>	2011-10-07 10:34	353
	libcommon_la-scored-..>	2011-10-07 10:34	7.3K
	libcommon_la-seq-rea..>	2011-10-07 10:34	380
	libcommon_la-seq-rea..>	2011-10-07 10:34	11K
	libcommon_la-seq.lo	2011-10-07 10:34	326
	libcommon_la-seq.o	2011-10-07 10:34	20K
	libcommon_la-simple-..>	2011-10-07 10:34	356
	libcommon_la-simple-..>	2011-10-07 10:34	4.5K
	libcommon_la-spearma..>	2011-10-07 10:34	392
	libcommon_la-spearma..>	2011-10-07 10:34	3.3K
	libcommon_la-string-..>	2011-10-07 10:34	359
	libcommon_la-string-..>	2011-10-07 10:34	10K
	libcommon_la-string-..>	2011-10-07 10:34	350
	libcommon_la-string-..>	2011-10-07 10:34	26K
	libcommon_la-string-..>	2011-10-07 10:34	353
	libcommon_la-string-..>	2011-10-07 10:34	6.0K
	libcommon_la-subst-m..>	2011-10-07 10:34	353
	libcommon_la-subst-m..>	2011-10-07 10:34	13K
	libcommon_la-substma..>	2011-10-07 10:34	368
	libcommon_la-substma..>	2011-10-07 10:34	8.4K
	libcommon_la-tree.lo	2011-10-07 10:34	329
	libcommon_la-tree.o	2011-10-07 10:34	36K
	libcommon_la-utils.lo	2011-10-07 10:34	332
	libcommon_la-utils.o	2011-10-07 10:34	20K
	libcommon_la-write-m..>	2011-10-07 10:34	347
	libcommon_la-write-m..>	2011-10-07 10:34	14K
	libcommon_la-xml-out.lo	2011-10-07 10:34	338
	libcommon_la-xml-out.o	2011-10-07 10:34	3.8K
	alphtype-alphtype.o	2011-10-07 10:34	6.5K
	libcommon.la	2011-10-07 10:34	889
	libcommon_la-xml-uti..>	2011-10-07 10:34	341
	libcommon_la-xml-util.o	2011-10-07 10:34	8.6K
	alphtype	2011-10-07 10:34	20K
	ama	2011-10-07 10:34	1.9M
	ama-ama.o	2011-10-07 10:34	30K
	ama-ama_scan.o	2011-10-07 10:34	7.3K
	ame	2011-10-07 10:34	1.6M
	ame-ame.o	2011-10-07 10:34	74K
	beadstring	2011-10-07 10:34	2.0M
	beadstring-beadstring.o	2011-10-07 10:34	34K
	ceqlogo-ceqlogo.o	2011-10-07 10:34	101K
	centrimo	2011-10-07 10:34	1.6M
	centrimo-centrimo.o	2011-10-07 10:34	22K
	ceqlogo	2011-10-07 10:34	1.6M
	clustalw-io	2011-10-07 10:34	107K
	clustalw2fasta	2011-10-07 10:34	117K
	clustalw2fasta-clust..>	2011-10-07 10:34	6.0K
	clustalw_io-clustalw..>	2011-10-07 10:34	11K
	clustalw2phylip	2011-10-07 10:34	107K
	clustalw2phylip-clus..>	2011-10-07 10:34	31K
	compute-prior-dist	2011-10-07 10:34	35K
	compute-uniform-priors	2011-10-07 10:34	35K
	compute_prior_dist-c..>	2011-10-07 10:34	3.7K
	compute_uniform_prio..>	2011-10-07 10:34	3.4K
	draw_mhmm-draw-mhmm.o	2011-10-07 10:34	10K
	draw_mhmm-read-mhmm.o	2011-10-07 10:34	20K
	draw-mhmm	2011-10-07 10:34	1.7M
	fasta-io	2011-10-07 10:34	88K
	fasta_io-fasta-io.o	2011-10-07 10:34	13K
	fimo	2011-10-07 10:34	1.9M
	fimo-fimo.o	2011-10-07 10:34	36K
	fitevd	2011-10-07 10:34	61K
	fitevd-fitevd.o	2011-10-07 10:34	52K
	gendb	2011-10-07 10:34	135K
	gendb-gendb.o	2011-10-07 10:34	51K
	getsize.o	2011-10-07 10:34	16K
	getsize	2011-10-07 10:34	30K
	glam2-glam2_alphabet.o	2011-10-07 10:34	5.5K
	glam2-glam2_args.o	2011-10-07 10:34	13K
	glam2-glam2_column_s..>	2011-10-07 10:34	19K
	glam2-glam2_dirichlet.o	2011-10-07 10:34	18K
	glam2-glam2_dna_prior.o	2011-10-07 10:34	1.4K
	glam2-glam2_fasta.o	2011-10-07 10:34	6.4K
	glam2-glam2_glam2.o	2011-10-07 10:34	11K
	glam2-glam2_glam2_aln.o	2011-10-07 10:34	3.7K
	glam2-glam2_init.o	2011-10-07 10:34	9.8K
	glam2-glam2_output.o	2011-10-07 10:34	9.4K
	glam2-glam2_recode3_..>	2011-10-07 10:34	4.9K
	glam2-glam2_site_sam..>	2011-10-07 10:34	15K
	glam2-glam2_util.o	2011-10-07 10:34	26K
	glam2	2011-10-07 10:34	216K
	glam2format	2011-10-07 10:34	49K
	glam2format-glam2_al..>	2011-10-07 10:34	2.9K
	glam2format-glam2_fa..>	2011-10-07 10:34	6.4K
	glam2format-glam2_gl..>	2011-10-07 10:34	11K
	glam2format-glam2_ut..>	2011-10-07 10:34	26K
	glam2mask-glam2_alig..>	2011-10-07 10:34	2.9K
	glam2mask-glam2_glam..>	2011-10-07 10:34	4.3K
	glam2mask	2011-10-07 10:34	45K
	glam2mask-glam2_fasta.o	2011-10-07 10:34	6.4K
	glam2mask-glam2_util.o	2011-10-07 10:34	26K
	glam2scan-glam2_alig..>	2011-10-07 10:34	2.9K
	glam2scan-glam2_alph..>	2011-10-07 10:34	5.5K
	glam2scan-glam2_diri..>	2011-10-07 10:34	18K
	glam2scan-glam2_dna_..>	2011-10-07 10:34	1.4K
	glam2scan-glam2_fasta.o	2011-10-07 10:34	6.4K
	glam2scan-glam2_heap.o	2011-10-07 10:34	2.0K
	glam2scan	2011-10-07 10:34	72K
	glam2scan-glam2_motif.o	2011-10-07 10:34	4.0K
	glam2scan-glam2_reco..>	2011-10-07 10:34	4.9K
	glam2scan-glam2_scan.o	2011-10-07 10:34	9.1K
	glam2scan-glam2_scan..>	2011-10-07 10:34	7.0K
	glam2scan-glam2_scan..>	2011-10-07 10:34	7.2K
	glam2scan-glam2_scan..>	2011-10-07 10:34	2.8K
	glam2scan-glam2_util.o	2011-10-07 10:34	26K
	gomo-gomo.o	2011-10-07 10:34	59K
	gomo-gomo_highlight.o	2011-10-07 10:34	31K
	gomo-merger.o	2011-10-07 10:34	4.6K
	gomo	2011-10-07 10:34	1.8M
	gomo-ranksum_test.o	2011-10-07 10:34	13K
	gomo-read_csv.o	2011-10-07 10:34	5.0K
	gomo_highlight	2011-10-07 10:34	52K
	gomo_highlight-gomo_..>	2011-10-07 10:34	32K
	llr	2011-10-07 10:34	38K
	llr-llr.o	2011-10-07 10:34	38K
	llr-logs.o	2011-10-07 10:34	2.1K
	log-hmm	2011-10-07 10:34	1.7M
	log_hmm-log-hmm.o	2011-10-07 10:34	10K
	mast-diagram.o	2011-10-07 10:34	8.1K
	mast	2011-10-07 10:34	1.9M
	mast-mast.o	2011-10-07 10:34	63K
	mast2txt	2011-10-07 10:34	1.4M
	mast2txt-mast2txt.o	2011-10-07 10:34	83K
	mcast	2011-10-07 10:34	34K
	mcast-mcast.o	2011-10-07 10:34	12K
	meme_bin-banner.o	2011-10-07 10:34	4.0K
	meme_bin-branching_s..>	2011-10-07 10:34	5.5K
	meme_bin-calculate_p..>	2011-10-07 10:34	9.8K
	meme_bin-discretize.o	2011-10-07 10:34	9.1K
	meme_bin-display.o	2011-10-07 10:34	67K
	meme_bin-dpalign.o	2011-10-07 10:34	13K
	meme_bin-em.o	2011-10-07 10:34	6.5K
	meme_bin-init.o	2011-10-07 10:34	40K
	meme_bin-justlike.o	2011-10-07 10:34	2.0K
	meme_bin-likelihood.o	2011-10-07 10:34	7.8K
	meme_bin-llr.o	2011-10-07 10:34	24K
	meme_bin-logs.o	2011-10-07 10:34	2.1K
	meme_bin-meme-print-..>	2011-10-07 10:34	2.1K
	meme_bin-meme.o	2011-10-07 10:34	18K
	meme_bin-meme_util.o	2011-10-07 10:34	16K
	meme_bin-message.o	2011-10-07 10:34	939
	meme_bin-mp.o	2011-10-07 10:34	934
	meme_bin-oops.o	2011-10-07 10:34	10K
	meme_bin-partition.o	2011-10-07 10:34	2.5K
	meme_bin-prior.o	2011-10-07 10:34	8.7K
	meme_bin-psp.o	2011-10-07 10:34	14K
	meme_bin-read_seq_fi..>	2011-10-07 10:34	11K
	meme_bin-seed.o	2011-10-07 10:34	6.4K
	meme_bin-seed_diffs.o	2011-10-07 10:34	8.4K
	meme_bin-seq2theta.o	2011-10-07 10:34	11K
	meme_bin-sp_matrix.o	2011-10-07 10:34	16K
	meme_bin-starts.o	2011-10-07 10:34	6.4K
	meme_bin-subseq7.o	2011-10-07 10:34	16K
	meme_bin-tcm.o	2011-10-07 10:34	7.4K
	meme-xml-html	2011-10-07 10:34	1.6M
	meme.bin	2011-10-07 10:34	1.9M
	meme2images	2011-10-07 10:34	1.5M
	meme2images-meme2ima..>	2011-10-07 10:34	6.6K
	meme_bin-verbosity.o	2011-10-07 10:34	1.0K
	meme_xml_html-meme-p..>	2011-10-07 10:34	2.1K
	meme_xml_html-meme-x..>	2011-10-07 10:34	4.2K
	mhmm-mhmm.o	2011-10-07 10:34	28K
	mhmm	2011-10-07 10:35	1.6M
	mhmm-io	2011-10-07 10:35	1.7M
	mhmm_io-mhmm-io.o	2011-10-07 10:35	3.3K
	mhmme	2011-10-07 10:35	1.7M
	mhmme-mhmme.o	2011-10-07 10:35	5.1K
	mhmms	2011-10-07 10:35	1.9M
	mhmms-mhmms.o	2011-10-07 10:35	54K
	mhmmscan	2011-10-07 10:35	1.9M
	mhmmscan-mhmmscan.o	2011-10-07 10:35	59K
	motiph-motiph.o	2011-10-07 10:35	31K
	motiph	2011-10-07 10:35	1.9M
	pmp_bf	2011-10-07 10:35	1.9M
	pmp_bf-pmp_bf.o	2011-10-07 10:35	14K
	readseq-readseq.o	2011-10-07 10:35	42K
	readseq	2011-10-07 10:35	57K
	readseq-ureadseq.o	2011-10-07 10:35	42K
	shadow	2011-10-07 10:35	1.8M
	shadow-shadow.o	2011-10-07 10:35	20K
	spamo-cisml-sax.o	2011-10-07 10:35	19K
	spamo-spamo-cisml.o	2011-10-07 10:35	8.4K
	spamo-spamo-matches.o	2011-10-07 10:35	11K
	spamo-spamo.o	2011-10-07 10:35	44K
	spamo	2011-10-07 10:35	1.9M
	spamo-spamo-output.o	2011-10-07 10:35	25K
	spamo-spamo-scan.o	2011-10-07 10:35	8.5K
	tomtom	2011-10-07 10:35	1.9M
	tomtom-tomtom.o	2011-10-07 10:35	62K
	tree	2011-10-07 10:35	93K
	tree-tree.o	2011-10-07 10:35	38K
	qvalue	2011-10-07 10:35	61K
	qvalue-qvalue.o	2011-10-07 10:35	21K
	ranksum_test	2011-10-07 10:35	39K
	ranksum_test-ranksum..>	2011-10-07 10:35	17K
	reconcile-tree-align..>	2011-10-07 10:35	136K
	reconcile_tree_align..>	2011-10-07 10:35	4.1K
	reduce-alignment	2011-10-07 10:35	107K
	reduce_alignment-red..>	2011-10-07 10:35	3.1K
	remove_alignment_gap..>	2011-10-07 10:35	2.6K
	remove-alignment-gaps	2011-10-07 10:35	107K
	xsltproc_lite	2011-10-07 10:35	1.6M
	xsltproc_lite-xsltpr..>	2011-10-07 10:35	3.0K
	parallel/	2011-10-07 10:35	-